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CSPI02G16490 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAACTAAAGCAAAAAATAAAAACCAAACCATCTTTCCTTTGCCCAACTGGGTCTTCTTCCTTCGTCTTTCCCTCTCATTTTCTTCTCTCCGACGACCGACCGGCAATCTGGCGTGCACCCAAAGGCACTGCGGGCCTTCTTCGTTGCCTTCAGCCTTTCGCTTCTTCGTTGACTTCACGCCTGACGCCCCACTGCATTCATCTTCTTCGTATATTTGTGCTTCTTAATTGGTAAATTTCTCTTGTGCTTTTGGTCTTTCTTTTTCTATTGAATAATAAATAGAAATGTGTATTTGTATCTATAGATGAAGAATTAAATTATGAAAATTATTTTGTATAATAACATTTGCATTCATTAAACATTATGCACTCTAGGAAACTATTTTTGCTCTCAGCATGCGCATCCTTTATTTGATAGGACAAGTTGTGAATTTTTTATCTTGTAAAAAGATCTAAGGAGAATCTTGGGAAAGAACTTTGTTTTTCATTTACCAGGTGAGAGAGGTGTGGATCTTTAAGGCAAGGACGTTGGTTAGCTGCTTGTGCAGTGAAGGATCAAAATACTTCTGAATCTGTACGAAAGCTCAAATGAGCAGTTCGAGAGAACAGTCTCCAGATTGGATGCGATCTTTCCAAGTAATTTTGTCTACTTGACGGTTTTGTTTCACGATTATAGAACAATCTAGGGGGATTTTAGTTTTTTAAGTTCTTTACCTATGTATACTTAACAATGTGATTGTAATATAATCTAGGGAAATTGTCAAAAATGACAAATTTGACAAAAAAGTTACAAAATATAGCAAAATTTCAGATTCTATCAATGATAGACATTGATATGCTTCTATTAGATATATTGATAGACACCGATAGAAGTCTATCAGTGCCTATCATCAATAGAATCCAAAATCTTGCTATATGTTATAAATATTTTAGTTTATTTTGTTATTTTTAAAAATGTTTTTATAATTTAGTGGTATGTTAAGAATGGATAAATAGAAAAACTTGAGAAATAACATGAGTTTAGTTGTTTAAATAATAGAAAATATCCGTGAAATATACTTTTATTTAAAAAATATCTAAGAACTTTCAAAAGCATTATATATAGTTAATATAGGGAAAAACTTGAGAAGTAACATGAGTTTAAGTTATGGTTAAATATAGTTACTTTGATACTTCAAAATGTTGCATTAATACTCTTAATCTTAACCGTCATGGGCTGACTTAGTGGTAGCGGGAACATAAAAAAAGACCAAAGGACTAAGGAGTCATGAGTTTAATCCATGGTGGTCACCTACCTAGAATTTAATATTCTACTGGTGTCCTTGACACCTAAATGTTGTAGGGTCAAGCGGGTTGCCCTGCGAGATTAGTTCAAGTGTGTGTAAGCTGGCCCAGACACTTATGAAAAATGTGAAAAAATACCCTTAATCTTCAGAGGTATTTTTTAACGTTAATTCGATGTTATTTTTTAAAAAGGTACTAAAACTAATTGTTGGATTTTTTTCTATATTTTTTTTAAGTTTAAAAGTATTTATGAAACTTTTGAAAGTTTAAGGCTATTTTTTGACTCAAAGTACTAACCATTTTTATCAAAAGCTAATGGTAAGCATATTTTGATTTTCTTTTTGAAAGTTAAGGTATTAACAAGGCTTTTGAAAGTTTAGAGGTCTTTTTTAAACAAAGTACGAAAATCAGATATTTTCAATAATTTAGCCATAATATAATAAACTGCCAATCTGTTGGTTAGTGTATTTTATTGGGGTATTTAGAATAGATTTCTAGGTTGATGTTAGCTCTCTTGTACATTTAAACAGGATCGACAATAAATTGTGCAACTTTGTCCTTTAGTTCGAAAGAGAGTGATGTTAACTCGCTTAAATAAAAGGCTTGAGAAATAAAAGATTAATCAACTGCCTCATAACAATATAACTTAATTGACTAACTTCTTTACAACTATATTAACCAAATCAGATCATAAAGCAATATAAACTTCAAAAACCTTGCCCAGAAATTTCAACTCTACATTCTTGCTTTTCCAAAGGATCTTCTGTTGTGAGTGGTATCATAGTTATTTTCTCCAAAAACAATCAAAACAGTTGGTCGTAAAAAGAGGAAAACCATTCATTTTATGACAATCTGAAATAAAATTGTGTTTTGATTGTTCCTCAAACTTGGAATGTTCAATATTACACATTAATTTCCAGTTACATATACACTCTCTCTCATCTATAACTTTTTTTCTTTTCATCCTTGCCTTCTCCCAACAATTTTTTGTATATTTATTTTGATTGGAGTCCTTGATGCTTTTTTTTCTTTCACAAATGATTCTGTATAGTGGTCTCAAATTTCACTGAAATAGACTGAAACTGTAGGTTTTCTCTTTGTACCAAAACAAAACAAAACTTAATTGAATAAGCTAAAAGATTGTCCTTTGAACAATTTAAGATACAAGCTCTTCCACACACCCCACAACCAAAAAGAAAAAGAAAAAGATACAAGTTTGCAGTCATGATTTACCTTCTACAGTTTGTATTAAATTTAAATTGTCTTCAGAGGTCTGAGATTGCGAGGAAATGACTATTGAGTTATTAACTAATGTATGTCTTCATCTATTATATTAATCTTGCACTTTGAGATATCGCTTTCAAAGTTATTGATGCCAAAGAGAACAATTTACTTTGTTGAATAGGCACCAACTGGTGTTGCTCTATCCTCTAATTCTGGATCTTCAAAGAATGGTAGCTCATCAATGGACAATGCAATTGATCAAAGGGATCCGTCTTCACATAAAACTACACAGGATTTAGATGGAGATCAGATTCAAGGTATACTGAAGTTAAACTTGAAACTTTATGTTCTTTTCTAGTAGGAACGTGAACATAGTCCTGCACACAAGAGGAAATGAGATTAAAGGCAAGAGAGAAGTCATATTTTAAATGGCTTTGGGTTCTATTTTTGTGTTACACCGATGATTTTCAACCATGAAAGCTTGAACGACTTACAATTTCACCTTTTTCTTGAATCCTGACTGCTACTAGGACTTGGATTATCATCTCTAATGATACTATATATGCTTTCTGGCTGGATAACTTTATTGTCATATTGTTTTATTGCAGGGGATTGTGGCAACCATAATTTGGCGAAGGAAGTGAAACTCGACAGACATACAGGTCATGAAGTGAGAGACTTTACCTCTTGATTTTTACTTTTGTGAGTGTGTATATTATTAAGGACATTAGTAAGTTAGCAACCTTCATCTTACTTATTTCGAGAATTATACATATATGAGTTGGTAGGCATAGCTTATTCATATTCTAGTTTGAAGTATTTGTAGTAAAATCTAGTTTGCTGATGGAAGAATCTTATTTTCGTTTATCAGAACTCAAAGCACTCTGTTTGGATGTTATCATTGGATTCAGAGTCATGTTCAGATAATAATTTTATTAAGGAGGATTACAGTTATCATGAAGAATTAGCTGAACTTGCAACATCTGAGATCCAAGGGAGAAGGAAGGATGAAAATGCAGGTCGCAGATTCACGGAGGGAAAATCTAAATCAAGGAAAGTATCAAATGAAATGTCTCCCAAAAAAAAGGTCAAATCCGAAGTTTGCACTTCAGCCAAAGAGAATATAATGAATTCTGGTACAAATAAAGGTGGTTCTACGATGGAAGGTGAGAAAGTAGTATAATAGTACATAACATTAAAAGGTAGAAACTTTAGTGACTTATAGAGAGTGCATTAAATTACTGGAGCCTTAATCTTGTTCTCTGCATGAAAGGTGTTTCCTGCTATGTATGATTTTGTTTTAGAATATTTTCTGAAAATCTTCCATCCATTCAGGATCTGAAGGCCATGTAAGAAATGGTGATGTGGAAATTTTAGAGAAGGATGCATTGGATGATTGCATCGGACCTCCTGTAAGATTTAATGCTAAAAGAAAGATGGCTATAGTTCATTACACTCTTTGTTCAGTCATTTGCCTTAGCAAAATTCAATTTACAGGTTTCCTCCTCAAGGTTGCCATTGGTGTTGTCTGACAAAGCCCATAGGTTGAAGGTAATTTTGCAATAAATGATCTTTTAGCAGCCTCCTTTTGTCTTGATTTGGACTTTAATACATTCTGGGTTGTATATATATATAGTGACATAACGTGGAAGAGAAATAGGTGGCTTCCTAGAGTGAAAAGAGATGAGAGTTCAAGAACTGCATGGACCTAGTGTACTACTTTTTTAGTTTCTTAAATCCTTTAATCAAAGCAATAACAGCATGCATCATTCTAATTCAGGTTTTTGAGGGAAGGGGAAGTAGAGAAAGAATATCGAATAGAGATTTTGAAAGCTACTGTCTTATCTTATGCAGGCGCTTGTTGAGTGTGAAGGAACTTCAATAGATTTGAGCGGTGACATGGGTGCTGTAGGACGTGTTGTAGTTTCAGATTCCTCATCTGCAAAAAATGAACTTTGCCTAGATCTGAAAGGTAAGTTTCATCCAAATATGCTATGTTTTGGCACCAAAAGTTCAAGTATACTTAAAACCCCAAAGTTATGTTTTAGCTGA AAAAACTAAAGCAAAAAATAAAAACCAAACCATCTTTCCTTTGCCCAACTGGGTCTTCTTCCTTCGTCTTTCCCTCTCATTTTCTTCTCTCCGACGACCGACCGGCAATCTGGCGTGCACCCAAAGGCACTGCGGGCCTTCTTCGTTGCCTTCAGCCTTTCGCTTCTTCGTTGACTTCACGCCTGACGCCCCACTGCATTCATCTTCTTCGTATATTTGTGCTTCTTAATTGGTGAGAGAGGTGTGGATCTTTAAGGCAAGGACGTTGGTTAGCTGCTTGTGCAGTGAAGGATCAAAATACTTCTGAATCTGTACGAAAGCTCAAATGAGCAGTTCGAGAGAACAGTCTCCAGATTGGATGCGATCTTTCCAAGCACCAACTGGTGTTGCTCTATCCTCTAATTCTGGATCTTCAAAGAATGGTAGCTCATCAATGGACAATGCAATTGATCAAAGGGATCCGTCTTCACATAAAACTACACAGGATTTAGATGGAGATCAGATTCAAGGGGATTGTGGCAACCATAATTTGGCGAAGGAAGTGAAACTCGACAGACATACAGGTCATGAAAACTCAAAGCACTCTGTTTGGATGTTATCATTGGATTCAGAGTCATGTTCAGATAATAATTTTATTAAGGAGGATTACAGTTATCATGAAGAATTAGCTGAACTTGCAACATCTGAGATCCAAGGGAGAAGGAAGGATGAAAATGCAGGTCGCAGATTCACGGAGGGAAAATCTAAATCAAGGAAAGTATCAAATGAAATGTCTCCCAAAAAAAAGGTCAAATCCGAAGTTTGCACTTCAGCCAAAGAGAATATAATGAATTCTGGTACAAATAAAGGTGGTTCTACGATGGAAGGATCTGAAGGCCATGTAAGAAATGGTGATGTGGAAATTTTAGAGAAGGATGCATTGGATGATTGCATCGGACCTCCTGTTTCCTCCTCAAGGTTGCCATTGGTGTTGTCTGACAAAGCCCATAGGTTGAAGGCGCTTGTTGAGTGTGAAGGAACTTCAATAGATTTGAGCGGTGACATGGGTGCTGTAGGACGTGTTGTAGTTTCAGATTCCTCATCTGCAAAAAATGAACTTTGCCTAGATCTGAAAGGTAAGTTTCATCCAAATATGCTATGTTTTGGCACCAAAAGTTCAAGTATACTTAAAACCCCAAAGTTATGTTTTAGCTGA ATGAGCAGTTCGAGAGAACAGTCTCCAGATTGGATGCGATCTTTCCAAGCACCAACTGGTGTTGCTCTATCCTCTAATTCTGGATCTTCAAAGAATGGTAGCTCATCAATGGACAATGCAATTGATCAAAGGGATCCGTCTTCACATAAAACTACACAGGATTTAGATGGAGATCAGATTCAAGGGGATTGTGGCAACCATAATTTGGCGAAGGAAGTGAAACTCGACAGACATACAGGTCATGAAAACTCAAAGCACTCTGTTTGGATGTTATCATTGGATTCAGAGTCATGTTCAGATAATAATTTTATTAAGGAGGATTACAGTTATCATGAAGAATTAGCTGAACTTGCAACATCTGAGATCCAAGGGAGAAGGAAGGATGAAAATGCAGGTCGCAGATTCACGGAGGGAAAATCTAAATCAAGGAAAGTATCAAATGAAATGTCTCCCAAAAAAAAGGTCAAATCCGAAGTTTGCACTTCAGCCAAAGAGAATATAATGAATTCTGGTACAAATAAAGGTGGTTCTACGATGGAAGGATCTGAAGGCCATGTAAGAAATGGTGATGTGGAAATTTTAGAGAAGGATGCATTGGATGATTGCATCGGACCTCCTGTTTCCTCCTCAAGGTTGCCATTGGTGTTGTCTGACAAAGCCCATAGGTTGAAGGCGCTTGTTGAGTGTGAAGGAACTTCAATAGATTTGAGCGGTGACATGGGTGCTGTAGGACGTGTTGTAGTTTCAGATTCCTCATCTGCAAAAAATGAACTTTGCCTAGATCTGAAAGGTAAGTTTCATCCAAATATGCTATGTTTTGGCACCAAAAGTTCAAGTATACTTAAAACCCCAAAGTTATGTTTTAGCTGA MSSSREQSPDWMRSFQAPTGVALSSNSGSSKNGSSSMDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEVKLDRHTGHENSKHSVWMLSLDSESCSDNNFIKEDYSYHEELAELATSEIQGRRKDENAGRRFTEGKSKSRKVSNEMSPKKKVKSEVCTSAKENIMNSGTNKGGSTMEGSEGHVRNGDVEILEKDALDDCIGPPVSSSRLPLVLSDKAHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGKFHPNMLCFGTKSSSILKTPKLCFS* Homology
BLAST of CSPI02G16490 vs. ExPASy Swiss-Prot
Match: Q9FLU1 (DNA-binding protein BIN4 OS=Arabidopsis thaliana OX=3702 GN=BIN4 PE=1 SV=2) HSP 1 Score: 90.5 bits (223), Expect = 3.4e-17 Identity = 110/345 (31.88%), Postives = 149/345 (43.19%), Query Frame = 0
BLAST of CSPI02G16490 vs. ExPASy TrEMBL
Match: A0A1S3CDB0 (DNA-binding protein BIN4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499580 PE=4 SV=1) HSP 1 Score: 493.8 bits (1270), Expect = 4.9e-136 Identity = 256/281 (91.10%), Postives = 266/281 (94.66%), Query Frame = 0
BLAST of CSPI02G16490 vs. ExPASy TrEMBL
Match: A0A0A0LJZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G338790 PE=4 SV=1) HSP 1 Score: 486.5 bits (1251), Expect = 7.8e-134 Identity = 253/256 (98.83%), Postives = 254/256 (99.22%), Query Frame = 0
BLAST of CSPI02G16490 vs. ExPASy TrEMBL
Match: A0A1S3CDA8 (DNA-binding protein BIN4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499580 PE=4 SV=1) HSP 1 Score: 465.3 bits (1196), Expect = 1.9e-127 Identity = 243/267 (91.01%), Postives = 253/267 (94.76%), Query Frame = 0
BLAST of CSPI02G16490 vs. ExPASy TrEMBL
Match: A0A5D3BS94 (DNA-binding protein BIN4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00060 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 6.0e-118 Identity = 227/251 (90.44%), Postives = 237/251 (94.42%), Query Frame = 0
BLAST of CSPI02G16490 vs. ExPASy TrEMBL
Match: A0A6J1CI66 (DNA-binding protein BIN4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011402 PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 7.1e-103 Identity = 209/268 (77.99%), Postives = 227/268 (84.70%), Query Frame = 0
BLAST of CSPI02G16490 vs. NCBI nr
Match: XP_031736566.1 (DNA-binding protein BIN4 isoform X2 [Cucumis sativus]) HSP 1 Score: 510.4 bits (1313), Expect = 1.0e-140 Identity = 267/280 (95.36%), Postives = 270/280 (96.43%), Query Frame = 0
BLAST of CSPI02G16490 vs. NCBI nr
Match: XP_004147326.1 (DNA-binding protein BIN4 isoform X1 [Cucumis sativus] >XP_011649447.1 DNA-binding protein BIN4 isoform X1 [Cucumis sativus] >KGN62298.2 hypothetical protein Csa_016942 [Cucumis sativus]) HSP 1 Score: 508.8 bits (1309), Expect = 3.0e-140 Identity = 264/267 (98.88%), Postives = 265/267 (99.25%), Query Frame = 0
BLAST of CSPI02G16490 vs. NCBI nr
Match: XP_008460814.1 (PREDICTED: DNA-binding protein BIN4 isoform X1 [Cucumis melo] >XP_016902628.1 PREDICTED: DNA-binding protein BIN4 isoform X1 [Cucumis melo] >XP_016902629.1 PREDICTED: DNA-binding protein BIN4 isoform X1 [Cucumis melo]) HSP 1 Score: 493.8 bits (1270), Expect = 1.0e-135 Identity = 256/281 (91.10%), Postives = 266/281 (94.66%), Query Frame = 0
BLAST of CSPI02G16490 vs. NCBI nr
Match: XP_008460815.1 (PREDICTED: DNA-binding protein BIN4 isoform X2 [Cucumis melo]) HSP 1 Score: 465.3 bits (1196), Expect = 3.8e-127 Identity = 243/267 (91.01%), Postives = 253/267 (94.76%), Query Frame = 0
BLAST of CSPI02G16490 vs. NCBI nr
Match: XP_031736567.1 (DNA-binding protein BIN4 isoform X3 [Cucumis sativus] >XP_031736568.1 DNA-binding protein BIN4 isoform X3 [Cucumis sativus]) HSP 1 Score: 444.9 bits (1143), Expect = 5.4e-121 Identity = 228/231 (98.70%), Postives = 229/231 (99.13%), Query Frame = 0
BLAST of CSPI02G16490 vs. TAIR 10
Match: AT5G24630.5 (double-stranded DNA binding ) HSP 1 Score: 94.0 bits (232), Expect = 2.2e-19 Identity = 106/341 (31.09%), Postives = 145/341 (42.52%), Query Frame = 0
BLAST of CSPI02G16490 vs. TAIR 10
Match: AT5G24630.3 (double-stranded DNA binding ) HSP 1 Score: 92.8 bits (229), Expect = 4.8e-19 Identity = 105/341 (30.79%), Postives = 144/341 (42.23%), Query Frame = 0
BLAST of CSPI02G16490 vs. TAIR 10
Match: AT5G24630.4 (double-stranded DNA binding ) HSP 1 Score: 92.8 bits (229), Expect = 4.8e-19 Identity = 105/341 (30.79%), Postives = 144/341 (42.23%), Query Frame = 0
BLAST of CSPI02G16490 vs. TAIR 10
Match: AT5G24630.2 (double-stranded DNA binding ) HSP 1 Score: 92.4 bits (228), Expect = 6.3e-19 Identity = 108/332 (32.53%), Postives = 146/332 (43.98%), Query Frame = 0
BLAST of CSPI02G16490 vs. TAIR 10
Match: AT5G24630.1 (double-stranded DNA binding ) HSP 1 Score: 90.5 bits (223), Expect = 2.4e-18 Identity = 109/342 (31.87%), Postives = 150/342 (43.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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