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CSPI02G16460 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTTTACAGAGCGGTAATAGTTCCTTCAAGGACATTTTGCATCGTATGTGACTCTCCACTTAACTGATCCCTCCAATGAATCCATTTATTATTATTAGTAGCTCAGTACTTGAAAGTAACGTTGAAATGAAAGGCCTTTTTTCTCATTGCCTTTTTATTGTTCCAAATTGAATTATTTAAGAAATTTCCTTCTGGTTTTGCTGATATAGATTTTATCTTTTCCAGGTTAGCTTTGGTCAGTCAGAGGCTAAGGTCGCTCTTTTATTCAACTATTATATTTTATATTAATGATAATATAGTACTGGAAATTTCTACTATCAATTCTGTTTTTGGATGGTCACTTCGTTTTAAATTTTAAGCACTCCCCTTTGTTTTGTTTTGGTTTGCGTTATTTTTTTAGTACAATGTCCTAGAACTGCCATAGAAGTCATGACTTGTTGGACGTATGTTACTTGATCAGATAGAATCTATCATGAACGATTTCATTCAGTTGAAGGCACTGTCCAAAGTTGATGAGGCTGAAACTATGGTTGAAGGTGAGTTGCTTTCTATTTCTCTGAATTTTTCAAAGTTGCTTGTTTCTGTGCTCATTCTATGTTTTGCATCTGTAGGCACATTAGATGGATTCTCGTTTGATTCTGAAGACGACGCTGAGAAAATAACTAAAGCTGCTTCTCCAGCTGACCAAAATGAGCCGGTAGAAGGGCTCAACACAAAATCCAAAAACAAAGCCGAGAAATCATCAGTATGTTCCTACGTCCAATTGCATGTAGTATCTTAACGATCCATCTTTCGTTCATGCTTATGCTCTGGAAATGTCATTTTAGGGGCGGAAGCGTGTTAAAACTGGAGGAAGGCTGCAGGCTCCGAAGAAAACAAGGAAGAAAGTTCAAGGTTCTAAAACTAAAAATGCAAAAAGCAAGAAATGAAGTTCGAAATCTTTGTTTGCCCTGAAAAGGGAAAGCCCTTTCGTCTGAATGTAAGAGGCAAATGGGGGCTTTAGCCAACCTGCTTGAAACAACATTTTCTTTCTCCGGTTCACCTCTCTGACTAGAAGTTTAGAGCCTTTTTTATAAAGTTTTTT CACTTTACAGAGCGGTAATAGTTCCTTCAAGGACATTTTGCATCGTTAGCTTTGGTCAGTCAGAGGCTAAGATAGAATCTATCATGAACGATTTCATTCAGTTGAAGGCACTGTCCAAAGTTGATGAGGCTGAAACTATGGTTGAAGGCACATTAGATGGATTCTCGTTTGATTCTGAAGACGACGCTGAGAAAATAACTAAAGCTGCTTCTCCAGCTGACCAAAATGAGCCGGTAGAAGGGCTCAACACAAAATCCAAAAACAAAGCCGAGAAATCATCAGGGCGGAAGCGTGTTAAAACTGGAGGAAGGCTGCAGGCTCCGAAGAAAACAAGGAAGAAAGTTCAAGGTTCTAAAACTAAAAATGCAAAAAGCAAGAAATGAAGTTCGAAATCTTTGTTTGCCCTGAAAAGGGAAAGCCCTTTCGTCTGAATGTAAGAGGCAAATGGGGGCTTTAGCCAACCTGCTTGAAACAACATTTTCTTTCTCCGGTTCACCTCTCTGACTAGAAGTTTAGAGCCTTTTTTATAAAGTTTTTT ATGAACGATTTCATTCAGTTGAAGGCACTGTCCAAAGTTGATGAGGCTGAAACTATGGTTGAAGGCACATTAGATGGATTCTCGTTTGATTCTGAAGACGACGCTGAGAAAATAACTAAAGCTGCTTCTCCAGCTGACCAAAATGAGCCGGTAGAAGGGCTCAACACAAAATCCAAAAACAAAGCCGAGAAATCATCAGGGCGGAAGCGTGTTAAAACTGGAGGAAGGCTGCAGGCTCCGAAGAAAACAAGGAAGAAAGTTCAAGGTTCTAAAACTAAAAATGCAAAAAGCAAGAAATGA MNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDDAEKITKAASPADQNEPVEGLNTKSKNKAEKSSGRKRVKTGGRLQAPKKTRKKVQGSKTKNAKSKK* Homology
BLAST of CSPI02G16460 vs. ExPASy Swiss-Prot
Match: Q9FLU1 (DNA-binding protein BIN4 OS=Arabidopsis thaliana OX=3702 GN=BIN4 PE=1 SV=2) HSP 1 Score: 60.8 bits (146), Expect = 9.8e-09 Identity = 51/105 (48.57%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of CSPI02G16460 vs. ExPASy TrEMBL
Match: A0A1S3CDB0 (DNA-binding protein BIN4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499580 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 7.2e-39 Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of CSPI02G16460 vs. ExPASy TrEMBL
Match: A0A1S3CEH7 (DNA-binding protein BIN4 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103499580 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 7.2e-39 Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of CSPI02G16460 vs. ExPASy TrEMBL
Match: A0A5D3BS94 (DNA-binding protein BIN4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00060 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 7.2e-39 Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of CSPI02G16460 vs. ExPASy TrEMBL
Match: A0A1S3CDA8 (DNA-binding protein BIN4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499580 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 7.2e-39 Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of CSPI02G16460 vs. ExPASy TrEMBL
Match: A0A1S4E3S5 (DNA-binding protein BIN4 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499580 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 7.2e-39 Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of CSPI02G16460 vs. NCBI nr
Match: XP_004147326.1 (DNA-binding protein BIN4 isoform X1 [Cucumis sativus] >XP_011649447.1 DNA-binding protein BIN4 isoform X1 [Cucumis sativus] >KGN62298.2 hypothetical protein Csa_016942 [Cucumis sativus]) HSP 1 Score: 178.3 bits (451), Expect = 3.2e-41 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of CSPI02G16460 vs. NCBI nr
Match: XP_031736566.1 (DNA-binding protein BIN4 isoform X2 [Cucumis sativus]) HSP 1 Score: 178.3 bits (451), Expect = 3.2e-41 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of CSPI02G16460 vs. NCBI nr
Match: XP_031736567.1 (DNA-binding protein BIN4 isoform X3 [Cucumis sativus] >XP_031736568.1 DNA-binding protein BIN4 isoform X3 [Cucumis sativus]) HSP 1 Score: 178.3 bits (451), Expect = 3.2e-41 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of CSPI02G16460 vs. NCBI nr
Match: XP_008460818.1 (PREDICTED: DNA-binding protein BIN4 isoform X4 [Cucumis melo] >XP_008460819.1 PREDICTED: DNA-binding protein BIN4 isoform X4 [Cucumis melo]) HSP 1 Score: 169.5 bits (428), Expect = 1.5e-38 Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of CSPI02G16460 vs. NCBI nr
Match: TYK02024.1 (DNA-binding protein BIN4 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 169.5 bits (428), Expect = 1.5e-38 Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of CSPI02G16460 vs. TAIR 10
Match: AT5G24630.1 (double-stranded DNA binding ) HSP 1 Score: 60.8 bits (146), Expect = 7.0e-10 Identity = 51/105 (48.57%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of CSPI02G16460 vs. TAIR 10
Match: AT5G24630.2 (double-stranded DNA binding ) HSP 1 Score: 60.8 bits (146), Expect = 7.0e-10 Identity = 51/105 (48.57%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of CSPI02G16460 vs. TAIR 10
Match: AT5G24630.3 (double-stranded DNA binding ) HSP 1 Score: 60.8 bits (146), Expect = 7.0e-10 Identity = 51/105 (48.57%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of CSPI02G16460 vs. TAIR 10
Match: AT5G24630.4 (double-stranded DNA binding ) HSP 1 Score: 60.8 bits (146), Expect = 7.0e-10 Identity = 51/105 (48.57%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of CSPI02G16460 vs. TAIR 10
Match: AT5G24630.5 (double-stranded DNA binding ) HSP 1 Score: 60.8 bits (146), Expect = 7.0e-10 Identity = 51/105 (48.57%), Postives = 63/105 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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