CSPI02G15780 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G15780
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	MYB transcription factor
Location	Chr2: 15279345 .. 15280648 (+)
RNA-Seq Expression	CSPI02G15780
Synteny	CSPI02G15780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAATAAAATATGAAATAAGTTAAAGCTGTTTGTTTTCTTTGTGTTTTTCAAATCTCTCAAAACCCCATTTCACAATATTTTCATCTTCCTCAATAATAAACTTTTTCTTTTTTAATCTCTCTTTTCCTCTTGAGCTAGGGTTTCTAAGTGTGTTTTTGGATTTTTGAGAATGATGAGATCAAAAAGTAGTAGTAGCAGTGGCGGCAGTAGCGGCGGTGGCGGTGGAAGCAGCGGTGTCAGCTGCTACCGAGGCCACTGGCGACCGGCGGAGGACAATAAACTCCGGCAGCTTGTTGAACAGTTTGGCCCTCAAAACTGGAATTACATTGCTGAACACTTTGAGGGCAGATCTGGTAATTTCCATTTAACATCTATTTCCCTTTGTAGGGTTCTTTTAAAAAGAAAATAGTTTTGTTTCTGTACTTTAAATTTTTTTATGATTTAGTTGATAATTTTCAACATGAAGATGAAATTTGATGTCAATTATATTAATAATAGTTGACAAAGAGGAAACAGAATTAAAACTTCACTTGGAAAGGCAAAGTTTATCACATTCTAAACCCATTTTACATATCATATGTTTCAATAATAGTGATATGTTAAATAACAAAACAAAAACTTTAATAATATATTTATATACCATATTTTATAAAGATAAAAGTGATCTTCGTCTATTAAATTTATAAACCAATCAATGATCTAACATTATATCAAGTCATCTTCTCCGTTCTTTACATTTTTGTTAAGAGTCCAAATAATGTAAATCAATGATAATAGTTATTATTAACTTTTAAATGATAGGGAATAATAATGGTTAATTTTCTCCGACTAAATTAATTTTTTTTGGTGTAGGAAAAAGTTGTAGATTGAGATGGTACAATCAATTAGATCCAAATATAAACAAGAACCCATTCAGTGAAGAAGAAGAAGAGAGACTTCTAATGTTTCAACAGCTTCATGGGAACAAATGGGCATTAATAGCAAGACATTTCAAAGGAAGAACAGATAATGCAGTGAAGAATCATTACCATGTAATAATGGCTAGAAGAAGAAGAGAACGTTTCACAATATTCACTAACCACAACAAAAATAATAACACTATTCGACATAGCTTACTATCCTTTTCCAAGACGACGGCAGCCGTCAAATGGACTCCTCTTACAGCTGGGGCTCCGGTGCTGCTCGGAAATGGTCGTGGAAAGTCGTCTTTGCCAGCCGTAGTGGCATCGGGATCCGGTGAGGGTGAGGATCACAAGAGAAGGATTCCATTCATAGACTTTCTTGGTATGGGAAGCTCTTAG

mRNA sequence

CCAAAATAAAATATGAAATAAGTTAAAGCTGTTTGTTTTCTTTGTGTTTTTCAAATCTCTCAAAACCCCATTTCACAATATTTTCATCTTCCTCAATAATAAACTTTTTCTTTTTTAATCTCTCTTTTCCTCTTGAGCTAGGGTTTCTAAGTGTGTTTTTGGATTTTTGAGAATGATGAGATCAAAAAGTAGTAGTAGCAGTGGCGGCAGTAGCGGCGGTGGCGGTGGAAGCAGCGGTGTCAGCTGCTACCGAGGCCACTGGCGACCGGCGGAGGACAATAAACTCCGGCAGCTTGTTGAACAGTTTGGCCCTCAAAACTGGAATTACATTGCTGAACACTTTGAGGGCAGATCTGGAAAAAGTTGTAGATTGAGATGGTACAATCAATTAGATCCAAATATAAACAAGAACCCATTCAGTGAAGAAGAAGAAGAGAGACTTCTAATGTTTCAACAGCTTCATGGGAACAAATGGGCATTAATAGCAAGACATTTCAAAGGAAGAACAGATAATGCAGTGAAGAATCATTACCATGTAATAATGGCTAGAAGAAGAAGAGAACGTTTCACAATATTCACTAACCACAACAAAAATAATAACACTATTCGACATAGCTTACTATCCTTTTCCAAGACGACGGCAGCCGTCAAATGGACTCCTCTTACAGCTGGGGCTCCGGTGCTGCTCGGAAATGGTCGTGGAAAGTCGTCTTTGCCAGCCGTAGTGGCATCGGGATCCGGTGAGGGTGAGGATCACAAGAGAAGGATTCCATTCATAGACTTTCTTGGTATGGGAAGCTCTTAG

Coding sequence (CDS)

ATGATGAGATCAAAAAGTAGTAGTAGCAGTGGCGGCAGTAGCGGCGGTGGCGGTGGAAGCAGCGGTGTCAGCTGCTACCGAGGCCACTGGCGACCGGCGGAGGACAATAAACTCCGGCAGCTTGTTGAACAGTTTGGCCCTCAAAACTGGAATTACATTGCTGAACACTTTGAGGGCAGATCTGGAAAAAGTTGTAGATTGAGATGGTACAATCAATTAGATCCAAATATAAACAAGAACCCATTCAGTGAAGAAGAAGAAGAGAGACTTCTAATGTTTCAACAGCTTCATGGGAACAAATGGGCATTAATAGCAAGACATTTCAAAGGAAGAACAGATAATGCAGTGAAGAATCATTACCATGTAATAATGGCTAGAAGAAGAAGAGAACGTTTCACAATATTCACTAACCACAACAAAAATAATAACACTATTCGACATAGCTTACTATCCTTTTCCAAGACGACGGCAGCCGTCAAATGGACTCCTCTTACAGCTGGGGCTCCGGTGCTGCTCGGAAATGGTCGTGGAAAGTCGTCTTTGCCAGCCGTAGTGGCATCGGGATCCGGTGAGGGTGAGGATCACAAGAGAAGGATTCCATTCATAGACTTTCTTGGTATGGGAAGCTCTTAG

Protein sequence

MMRSKSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKTTAAVKWTPLTAGAPVLLGNGRGKSSLPAVVASGSGEGEDHKRRIPFIDFLGMGSS*

Homology

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BLAST of CSPI02G15780 vs. ExPASy Swiss-Prot
Match: Q6R0C4 (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 9.5e-46
Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 25  CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSE 84
           C RGHWRPAED KLR+LVEQFGP NWN IA+   GRSGKSCRLRW+NQLDP IN+NPF+E
Sbjct: 3   CSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFTE 62

Query: 85  EEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRER 132
           EEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR RER
Sbjct: 63  EEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRER 109

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BLAST of CSPI02G15780 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-43
Identity = 84/130 (64.62%), Postives = 100/130 (76.92%), Query Frame = 0


Query: 15  GGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLD 74
           G GGG  G  C RGHWRPAED KL+ LV Q+GPQNWN IAE  +GRSGKSCRLRW+NQLD
Sbjct: 37  GHGGGVQGKLCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRWFNQLD 96

Query: 75  PNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTI 134
           P IN+  F+EEEEERL+   + +GNKWALIAR F GRTDNAVKNH+HV+MARR RE+   
Sbjct: 97  PRINRRAFTEEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARRHREQSGA 156

Query: 135 FTNHNKNNNT 145
           F     ++++
Sbjct: 157 FRRRKPSSSS 166

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BLAST of CSPI02G15780 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-43
Identity = 78/108 (72.22%), Postives = 91/108 (84.26%), Query Frame = 0


Query: 23  VSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPF 82
           + C RGHWRPAED KL+ LVEQ+GP NWN IA    GRSGKSCRLRW+NQLDP IN+NPF
Sbjct: 2   IMCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPF 61

Query: 83  SEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRE 131
           +EEEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR R+
Sbjct: 62  TEEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ 109

[Close]

BLAST of CSPI02G15780 vs. ExPASy Swiss-Prot
Match: Q6R053 (Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 8.3e-42
Identity = 81/115 (70.43%), Postives = 92/115 (80.00%), Query Frame = 0


Query: 19  GSSGVS---CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDP 78
           G SG++   C RGHWRP ED KL++LV QFGPQNWN I+ H  GRSGKSCRLRW+NQLDP
Sbjct: 82  GKSGINTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDP 141

Query: 79  NINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRE 131
            INK  F+EEEE RLL   + +GNKWALI+R F GRTDNAVKNH+HVIMARR RE
Sbjct: 142 RINKRAFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRE 196

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BLAST of CSPI02G15780 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-41
Identity = 79/114 (69.30%), Postives = 94/114 (82.46%), Query Frame = 0


Query: 18  GGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNI 77
           G SS  S  RGHWRPAED KL++LV  +GPQNWN IAE  +GRSGKSCRLRW+NQLDP I
Sbjct: 98  GHSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRI 157

Query: 78  NKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRER 132
           N+  F+EEEEERL+   +L+GNKWA+IAR F GRTDN+VKNH+HVIMAR+ RE+
Sbjct: 158 NRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQ 211

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BLAST of CSPI02G15780 vs. ExPASy TrEMBL
Match: A0A0A0LM98 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302300 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 9.1e-116
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MMRSKSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60
           MMRSKSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR
Sbjct: 1   MMRSKSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60

Query: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120
           SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY
Sbjct: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120

Query: 121 HVIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKTTAAVKWTPLTAGAPVLLGNGRGKSS 180
           HVIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKTTAAVKWTPLTAGAPVLLGNGRGKSS
Sbjct: 121 HVIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKTTAAVKWTPLTAGAPVLLGNGRGKSS 180

Query: 181 LPAVVASGSGEGEDHKRRIPFIDFLGMGSS 211
           LPAVVASGSGEGEDHKRRIPFIDFLGMGSS
Sbjct: 181 LPAVVASGSGEGEDHKRRIPFIDFLGMGSS 210

[Close]

BLAST of CSPI02G15780 vs. ExPASy TrEMBL
Match: A0A5D3BQW6 (Transcriptional activator Myb OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00600 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.5e-113
Identity = 206/210 (98.10%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MMRSKSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60
           MMRS+SSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR
Sbjct: 1   MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60

Query: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120
           SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY
Sbjct: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120

Query: 121 HVIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKTTAAVKWTPLTAGAPVLLGNGRGKSS 180
           HVIMARRRRERFTIFTNHNKNNNTIRHSLLSFSK T AVKWTPLTAGAPVLLGNGRGKSS
Sbjct: 121 HVIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKMTTAVKWTPLTAGAPVLLGNGRGKSS 180

Query: 181 LPAVVASGSGEGEDHKRRIPFIDFLGMGSS 211
           L AVVASGSGEGEDHKRRIPFIDFLGMGSS
Sbjct: 181 LTAVVASGSGEGEDHKRRIPFIDFLGMGSS 210

[Close]

BLAST of CSPI02G15780 vs. ExPASy TrEMBL
Match: A0A1S3CEN7 (transcriptional activator Myb OS=Cucumis melo OX=3656 GN=LOC103499632 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.2e-112
Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 2   MRSKSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRS 61
           MRS+SSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRS
Sbjct: 1   MRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRS 60

Query: 62  GKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYH 121
           GKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYH
Sbjct: 61  GKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYH 120

Query: 122 VIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKTTAAVKWTPLTAGAPVLLGNGRGKSSL 181
           VIMARRRRERFTIFTNHNKNNNTIRHSLLSFSK T AVKWTPLTAGAPVLLGNGRGKSSL
Sbjct: 121 VIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKMTTAVKWTPLTAGAPVLLGNGRGKSSL 180

Query: 182 PAVVASGSGEGEDHKRRIPFIDFLGMGSS 211
            AVVASGSGEGEDHKRRIPFIDFLGMGSS
Sbjct: 181 TAVVASGSGEGEDHKRRIPFIDFLGMGSS 209

[Close]

BLAST of CSPI02G15780 vs. ExPASy TrEMBL
Match: A0A6J1EVU5 (transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111438332 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.5e-86
Identity = 174/220 (79.09%), Postives = 182/220 (82.73%), Query Frame = 0


Query: 1   MMRSKSSS---SSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF 60
           MMRS+SSS   SSGG  GGG G+S VSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF
Sbjct: 1   MMRSRSSSSGGSSGGVGGGGCGNSSVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF 60

Query: 61  EGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120
           EGRSGKSCRLRWYNQLDPNINKNPF+EEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK
Sbjct: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120

Query: 121 NHYHVIMARRRRERFTIFTNHNKNN-NTIRHSLLSFSKT------TAAVKWTPLTAGAPV 180
           NHYHVIMARRRRERFTIFTNHN NN    RHSLL FSK         AVKWTPL   A  
Sbjct: 121 NHYHVIMARRRRERFTIFTNHNNNNILRTRHSLLPFSKVLQSSQQKTAVKWTPLM--ATT 180

Query: 181 LLGNGRGKSSLPAVVASGSGEGEDHKRRIPFIDFLGMGSS 211
           +L +G G  +  A V SGS E E+ KRR+PFIDFLGMGSS
Sbjct: 181 VLRHGGGMLAPTAAVVSGSDEREEQKRRVPFIDFLGMGSS 218

[Close]

BLAST of CSPI02G15780 vs. ExPASy TrEMBL
Match: A0A6J1I2H4 (transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111470309 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.7e-86
Identity = 173/220 (78.64%), Postives = 181/220 (82.27%), Query Frame = 0


Query: 1   MMRSKSSS---SSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF 60
           MMRS+SSS   SSGG  GGG G+S VSCYRGHWRPAEDNKLRQLVEQ GPQNWNYIAEHF
Sbjct: 1   MMRSRSSSSGGSSGGVGGGGCGNSSVSCYRGHWRPAEDNKLRQLVEQLGPQNWNYIAEHF 60

Query: 61  EGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120
           EGRSGKSCRLRWYNQLDPNINKNPF+EEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK
Sbjct: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120

Query: 121 NHYHVIMARRRRERFTIFTNHNKNN-NTIRHSLLSFSKT------TAAVKWTPLTAGAPV 180
           NHYHVIMARRRRERFTIFTNHN NN    RHSLL FSK         A+KWTPL   A  
Sbjct: 121 NHYHVIMARRRRERFTIFTNHNNNNILRTRHSLLPFSKVLQSSHQKTAIKWTPLM--ATT 180

Query: 181 LLGNGRGKSSLPAVVASGSGEGEDHKRRIPFIDFLGMGSS 211
           +L +G G  +  A VA GS E ED KRR+PFIDFLGMGSS
Sbjct: 181 VLRHGGGMLAPTATVAVGSDEREDQKRRVPFIDFLGMGSS 218

[Close]

BLAST of CSPI02G15780 vs. NCBI nr
Match: XP_004147366.1 (transcription factor MYB52 [Cucumis sativus] >KGN62164.1 hypothetical protein Csa_006344 [Cucumis sativus])

HSP 1 Score: 426.0 bits (1094), Expect = 1.9e-115
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MMRSKSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60
           MMRSKSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR
Sbjct: 1   MMRSKSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60

Query: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120
           SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY
Sbjct: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120

Query: 121 HVIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKTTAAVKWTPLTAGAPVLLGNGRGKSS 180
           HVIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKTTAAVKWTPLTAGAPVLLGNGRGKSS
Sbjct: 121 HVIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKTTAAVKWTPLTAGAPVLLGNGRGKSS 180

Query: 181 LPAVVASGSGEGEDHKRRIPFIDFLGMGSS 211
           LPAVVASGSGEGEDHKRRIPFIDFLGMGSS
Sbjct: 181 LPAVVASGSGEGEDHKRRIPFIDFLGMGSS 210

[Close]

BLAST of CSPI02G15780 vs. NCBI nr
Match: KAA0040758.1 (transcriptional activator Myb [Cucumis melo var. makuwa] >TYK02073.1 transcriptional activator Myb [Cucumis melo var. makuwa])

HSP 1 Score: 417.9 bits (1073), Expect = 5.1e-113
Identity = 206/210 (98.10%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MMRSKSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60
           MMRS+SSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR
Sbjct: 1   MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60

Query: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120
           SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY
Sbjct: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120

Query: 121 HVIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKTTAAVKWTPLTAGAPVLLGNGRGKSS 180
           HVIMARRRRERFTIFTNHNKNNNTIRHSLLSFSK T AVKWTPLTAGAPVLLGNGRGKSS
Sbjct: 121 HVIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKMTTAVKWTPLTAGAPVLLGNGRGKSS 180

Query: 181 LPAVVASGSGEGEDHKRRIPFIDFLGMGSS 211
           L AVVASGSGEGEDHKRRIPFIDFLGMGSS
Sbjct: 181 LTAVVASGSGEGEDHKRRIPFIDFLGMGSS 210

[Close]

BLAST of CSPI02G15780 vs. NCBI nr
Match: XP_008460890.2 (PREDICTED: transcriptional activator Myb [Cucumis melo])

HSP 1 Score: 415.6 bits (1067), Expect = 2.5e-112
Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 2   MRSKSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRS 61
           MRS+SSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRS
Sbjct: 1   MRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRS 60

Query: 62  GKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYH 121
           GKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYH
Sbjct: 61  GKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYH 120

Query: 122 VIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKTTAAVKWTPLTAGAPVLLGNGRGKSSL 181
           VIMARRRRERFTIFTNHNKNNNTIRHSLLSFSK T AVKWTPLTAGAPVLLGNGRGKSSL
Sbjct: 121 VIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKMTTAVKWTPLTAGAPVLLGNGRGKSSL 180

Query: 182 PAVVASGSGEGEDHKRRIPFIDFLGMGSS 211
            AVVASGSGEGEDHKRRIPFIDFLGMGSS
Sbjct: 181 TAVVASGSGEGEDHKRRIPFIDFLGMGSS 209

[Close]

BLAST of CSPI02G15780 vs. NCBI nr
Match: XP_038902736.1 (transcription factor MYB52-like [Benincasa hispida] >XP_038902737.1 transcription factor MYB52-like [Benincasa hispida])

HSP 1 Score: 384.8 bits (987), Expect = 4.8e-103
Identity = 193/210 (91.90%), Postives = 197/210 (93.81%), Query Frame = 0


Query: 1   MMRSKSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60
           MMRS+SSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR
Sbjct: 1   MMRSRSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGR 60

Query: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120
           SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY
Sbjct: 61  SGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHY 120

Query: 121 HVIMARRRRERFTIFTNHNKNNNTIRHSLLSFSKTTAAVKWTPLTAGAPVLLGNGRGKSS 180
           HVIMARRRRERFTIFTN+N  N   RHSLL FSKTT A+KWTPLTA APVLLGNGRGKSS
Sbjct: 121 HVIMARRRRERFTIFTNNNNINLRNRHSLLPFSKTT-AIKWTPLTATAPVLLGNGRGKSS 180

Query: 181 LPAVVASGSGEGEDHKRRIPFIDFLGMGSS 211
           LP  VASGS E +D KRRIPFIDFLGMGSS
Sbjct: 181 LPTAVASGSSESDDQKRRIPFIDFLGMGSS 209

[Close]

BLAST of CSPI02G15780 vs. NCBI nr
Match: KAG6571346.1 (Transcription factor MYB52, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335.5 bits (859), Expect = 3.3e-88
Identity = 176/221 (79.64%), Postives = 185/221 (83.71%), Query Frame = 0


Query: 1   MMRSKSSS---SSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF 60
           MMRS+SSS   SSGG  GGG G+S VSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF
Sbjct: 1   MMRSRSSSSGGSSGGVGGGGCGNSSVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHF 60

Query: 61  EGRSGKSCRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120
           EGRSGKSCRLRWYNQLDPNINKNPF+EEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK
Sbjct: 61  EGRSGKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVK 120

Query: 121 NHYHVIMARRRRERFTIFTNHNKNNNTI--RHSLLSFSKT------TAAVKWTPLTAGAP 180
           NHYHVIMARRRRERFTIFTNHN NNN +  RHSLL FSK         AVKWTPL   A 
Sbjct: 121 NHYHVIMARRRRERFTIFTNHNNNNNILRTRHSLLPFSKVLQSSQQKTAVKWTPLM--AT 180

Query: 181 VLLGNGRGKSSLPAVVASGSGEGEDHKRRIPFIDFLGMGSS 211
            +L +G G S+  A V SGS E E+ KRR+PFIDFLGMGSS
Sbjct: 181 TVLRHGGGMSAPTAAVVSGSDEREEQKRRVPFIDFLGMGSS 219

[Close]

BLAST of CSPI02G15780 vs. TAIR 10
Match: AT4G33450.1 (myb domain protein 69 )

HSP 1 Score: 186.4 bits (472), Expect = 2.3e-47
Identity = 88/132 (66.67%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 24  SCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFS 83
           SC RGHWRP ED+ LRQLVEQ+GP+NWN+IA+H  GRSGKSCRLRWYNQLDPNI K PF+
Sbjct: 16  SCQRGHWRPVEDDNLRQLVEQYGPKNWNFIAQHLYGRSGKSCRLRWYNQLDPNITKKPFT 75

Query: 84  EEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRERFTIFTNHNKNNN 143
           EEEEERLL   ++ GN+WA IAR F GRTDNAVKNH+HVIMARR+RE F+  +      N
Sbjct: 76  EEEEERLLKAHRIQGNRWASIARLFPGRTDNAVKNHFHVIMARRKRENFS--STATSTFN 135

Query: 144 TIRHSLLSFSKT 156
              H++LS S +
Sbjct: 136 QTWHTVLSPSSS 145

[Close]

BLAST of CSPI02G15780 vs. TAIR 10
Match: AT1G17950.1 (myb domain protein 52 )

HSP 1 Score: 184.9 bits (468), Expect = 6.8e-47
Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 25  CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPFSE 84
           C RGHWRPAED KLR+LVEQFGP NWN IA+   GRSGKSCRLRW+NQLDP IN+NPF+E
Sbjct: 3   CSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFTE 62

Query: 85  EEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRER 132
           EEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR RER
Sbjct: 63  EEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRER 109

[Close]

BLAST of CSPI02G15780 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 )

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-44
Identity = 78/108 (72.22%), Postives = 91/108 (84.26%), Query Frame = 0


Query: 23  VSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNINKNPF 82
           + C RGHWRPAED KL+ LVEQ+GP NWN IA    GRSGKSCRLRW+NQLDP IN+NPF
Sbjct: 2   IMCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPF 61

Query: 83  SEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRE 131
           +EEEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR R+
Sbjct: 62  TEEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ 109

[Close]

BLAST of CSPI02G15780 vs. TAIR 10
Match: AT5G17800.1 (myb domain protein 56 )

HSP 1 Score: 171.8 bits (434), Expect = 5.9e-43
Identity = 81/115 (70.43%), Postives = 92/115 (80.00%), Query Frame = 0


Query: 19  GSSGVS---CYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDP 78
           G SG++   C RGHWRP ED KL++LV QFGPQNWN I+ H  GRSGKSCRLRW+NQLDP
Sbjct: 82  GKSGINTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDP 141

Query: 79  NINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRE 131
            INK  F+EEEE RLL   + +GNKWALI+R F GRTDNAVKNH+HVIMARR RE
Sbjct: 142 RINKRAFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRE 196

[Close]

BLAST of CSPI02G15780 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 )

HSP 1 Score: 171.4 bits (433), Expect = 7.7e-43
Identity = 79/114 (69.30%), Postives = 94/114 (82.46%), Query Frame = 0


Query: 18  GGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKSCRLRWYNQLDPNI 77
           G SS  S  RGHWRPAED KL++LV  +GPQNWN IAE  +GRSGKSCRLRW+NQLDP I
Sbjct: 98  GHSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRI 157

Query: 78  NKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIMARRRRER 132
           N+  F+EEEEERL+   +L+GNKWA+IAR F GRTDN+VKNH+HVIMAR+ RE+
Sbjct: 158 NRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQ 211

The following BLAST results are available for this feature:

BLAST of CSPI02G15780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R0C4	9.5e-46	76.64	Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1	[more]
Q5NBM8	1.5e-43	64.62	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
Q9FX36	1.5e-43	72.22	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1	[more]
Q6R053	8.3e-42	70.43	Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1	[more]
Q9SEZ4	1.1e-41	69.30	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]

BLAST of CSPI02G15780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM98	9.1e-116	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302300 PE=4 SV=1	[more]
A0A5D3BQW6	2.5e-113	98.10	Transcriptional activator Myb OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CEN7	1.2e-112	98.09	transcriptional activator Myb OS=Cucumis melo OX=3656 GN=LOC103499632 PE=4 SV=1	[more]
A0A6J1EVU5	1.5e-86	79.09	transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111438332 PE=4...	[more]
A0A6J1I2H4	5.7e-86	78.64	transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111470309 PE=4 S...	[more]

BLAST of CSPI02G15780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147366.1	1.9e-115	100.00	transcription factor MYB52 [Cucumis sativus] >KGN62164.1 hypothetical protein Cs...	[more]
KAA0040758.1	5.1e-113	98.10	transcriptional activator Myb [Cucumis melo var. makuwa] >TYK02073.1 transcripti...	[more]
XP_008460890.2	2.5e-112	98.09	PREDICTED: transcriptional activator Myb [Cucumis melo]	[more]
XP_038902736.1	4.8e-103	91.90	transcription factor MYB52-like [Benincasa hispida] >XP_038902737.1 transcriptio...	[more]
KAG6571346.1	3.3e-88	79.64	Transcription factor MYB52, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CSPI02G15780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33450.1	2.3e-47	66.67	myb domain protein 69	[more]
AT1G17950.1	6.8e-47	76.64	myb domain protein 52	[more]
AT1G73410.1	1.1e-44	72.22	myb domain protein 54	[more]
AT5G17800.1	5.9e-43	70.43	myb domain protein 56	[more]
AT1G69560.1	7.7e-43	69.30	myb domain protein 105	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 78..126 e-value: 9.7E-14 score: 61.7 coord: 26..75 e-value: 1.1E-13 score: 61.5
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 74..124 score: 8.81522
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 27..73 score: 10.882227
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 30..71 e-value: 4.7115E-13 score: 59.1262
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 81..121 e-value: 3.47722E-10 score: 51.8074
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 30..90 e-value: 4.3E-18 score: 65.3
None	No IPR available	GENE3D	1.10.10.60		coord: 80..148 e-value: 4.3E-16 score: 60.6
None	No IPR available	GENE3D	1.10.10.60		coord: 26..78 e-value: 1.3E-23 score: 84.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR45614:SF100	MYB TRANSCRIPTION FACTOR	coord: 19..145
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 19..145
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..25 score: 6.0
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 78..128 score: 18.979927
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 27..77 score: 22.758425
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 25..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G15780.1	CSPI02G15780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding