CSPI02G15040 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G15040
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 14643285 .. 14643709 (-)
RNA-Seq ExpressionCSPI02G15040
SyntenyCSPI02G15040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAATCACATCAAGACCCACAAATCCAATCAATGGACGGCGGATCTGGGATACCCATTTGAGCTTGTAGAAACCCCAGAAGAAACTTGGGACTCATCGGTGAAAATATTCAAATGGGTATTCTGACATTTTGATTATAATATTGGGGAAGAAAACTTATAGTCCAATACCAGACGTACGAGGAGATGATGATTTGGGTTTTTTCAGATCATCTTTGTAATAAAAGATTTTTATGGTTTCTCTTAGTCAACGGAATCGATTACTTGGCCTTCGAATAATGGAAGGTTTGTGTGTTGTTTAAGATGGACGTTTGATGTTTTGGGTAATGAAATTTTGTTGAGGTCAACAAATATGAATAAGGATGAGCTCTCAGTAATACACCTGACGTTAAGATATTCGACGCTGCTGAAAATTTCGATTGA

mRNA sequence

ATGAGAAATCACATCAAGACCCACAAATCCAATCAATGGACGGCGGATCTGGGATACCCATTTGAGCTTGTAGAAACCCCAGAAGAAACTTGGGACTCATCGGTGAAAATATTCAAATGGTCAACGGAATCGATTACTTGGCCTTCGAATAATGGAAGTAATACACCTGACGTTAAGATATTCGACGCTGCTGAAAATTTCGATTGA

Coding sequence (CDS)

ATGAGAAATCACATCAAGACCCACAAATCCAATCAATGGACGGCGGATCTGGGATACCCATTTGAGCTTGTAGAAACCCCAGAAGAAACTTGGGACTCATCGGTGAAAATATTCAAATGGTCAACGGAATCGATTACTTGGCCTTCGAATAATGGAAGTAATACACCTGACGTTAAGATATTCGACGCTGCTGAAAATTTCGATTGA

Protein sequence

MRNHIKTHKSNQWTADLGYPFELVETPEETWDSSVKIFKWSTESITWPSNNGSNTPDVKIFDAAENFD*
Homology
[Close]
BLAST of CSPI02G15040 vs. ExPASy TrEMBL
Match: A0A0A0LJN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G296050 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.1e-33
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MRNHIKTHKSNQWTADLGYPFELVETPEETWDSSVKIFKWSTESITWPSNNGSNTPDVKI 60
          MRNHIKTHKSNQWTADLGYPFELVETPEETWDSSVKIFKWSTESITWPSNNGSNTPDVKI
Sbjct: 1  MRNHIKTHKSNQWTADLGYPFELVETPEETWDSSVKIFKWSTESITWPSNNGSNTPDVKI 60

Query: 61 FDAAENFD 69
          FDAAENFD
Sbjct: 61 FDAAENFD 68

[Close]
BLAST of CSPI02G15040 vs. NCBI nr
Match: KGN62080.1 (hypothetical protein Csa_005999 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 6.5e-33
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MRNHIKTHKSNQWTADLGYPFELVETPEETWDSSVKIFKWSTESITWPSNNGSNTPDVKI 60
          MRNHIKTHKSNQWTADLGYPFELVETPEETWDSSVKIFKWSTESITWPSNNGSNTPDVKI
Sbjct: 1  MRNHIKTHKSNQWTADLGYPFELVETPEETWDSSVKIFKWSTESITWPSNNGSNTPDVKI 60

Query: 61 FDAAENFD 69
          FDAAENFD
Sbjct: 61 FDAAENFD 68

The following BLAST results are available for this feature:
BLAST of CSPI02G15040 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G15040 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJN43.1e-33100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G296050 PE=4 SV=1[more]
BLAST of CSPI02G15040 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62080.16.5e-33100.00hypothetical protein Csa_005999 [Cucumis sativus][more]
BLAST of CSPI02G15040 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G15040.1CSPI02G15040.1mRNA