CSPI02G14560 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G14560
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	B3 domain-containing transcription factor VRN1-like
Location	Chr2: 14328218 .. 14329553 (+)
RNA-Seq Expression	CSPI02G14560
Synteny	CSPI02G14560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTGTTCACTTCTCCAAATCCCCATTTCTTCAAGATCATTCTTCATCAAAATCTCACCCAACAAAAACTTGTAAGTACTAATCAAACCAACAAATTTTTCAAATCACATTCTCTAATTACTCTTTTTTTTTTTTTCTTCTTCTTCTTCTTCAACAGGATCTTCCAAACAAGTTCGTCAAGAACAATGCCCATTCTCTGTTATTCAACAACGCCACTCTTTCCCTTCCCGACGGCTCTAAATGGAACTTCCAACTCACGAGACTAGACGGAAAAATATGTTTCCTCAGAGGATGGCCGGAGTTTGTAAACTTTTATGCCGTTCAACCTGGATATTTCCTCGTGTTCCAGTTGAAAGGAATTTGTTGTTTCAATGTTCTTATTTTCGATACTTCCGCTACCGAAATCGATTATCCAATGCGTCGACTGCCGGTAATCGTTCCTAAAAGCGAAAGCGATGATGAAGGTGAATCTATCCAGATACTACATGAGGAGGTTTTGAAGAAGAGAAGAAGAATGGAGAAGAAAGAGAAAGAAACATCCGCGTATTGCTCCTTGCGGGAGATGAAGAAGAATATGAAGATAAAGATAATGAAGCGTCGAGAGTTCACTACACCTCAAGGATTCAGCGATGACGATGAAGATGAAGATCTGGAAACGGACTACTCACCGAGACAAACTAATTACAGAGCATCAGGTTAATTTTTCCACTTAATTTCTCTAAACTTTCATTTGAATTTCAGCAATCAGTACTATAGTTTGATGAACACTCACCGATTTCAGAGTACAATGAGAGAGAAGACGGCAGATCCAGTCCGGAATCGATGAGACCGATGAATCCACGGAAGACGCAGCAGGTATTAACAGAGAATCAATTGGTAGTTCTGAGGAGAGCGAGTTCGTTCAAATGTAGAACGAAGAACCCTTCATTCATGGTTACAATGAGGCCTTCGTACATCCAAACAGGAAATTGTCTGGTAAGAACAGAACAGAACAACAACAAGAGTTGGATGGATGGATGGGTGATTTGAGAATAGTCATCGTTGATGAATGTGTGATTAATTAATCTGCAGAGCTTGCCAAGGATCTTTTCAGAGAGATATATAAAGGAATCGGTGGATGTGAAGCTGGAGGTGGGAGATGGTCGGATTTGGAAAGTATGGTGCGGAGTCCGGTGGGCGTTCACACGGCGGCGAACGGAGCTGAAAGGCGGTTGGAAGAGATTCGCGGTTGATAATGAATTGGAAGAAGGGGATATTTGTGTGTTTGAATTAATGAACAAAACCCCTAAAGTTCATTTCCTCGTCACCATTTTCCGTCTTCCAAGTCCTTAG

mRNA sequence

ATGGGTTTGTTCACTTCTCCAAATCCCCATTTCTTCAAGATCATTCTTCATCAAAATCTCACCCAACAAAAACTTGATCTTCCAAACAAGTTCGTCAAGAACAATGCCCATTCTCTGTTATTCAACAACGCCACTCTTTCCCTTCCCGACGGCTCTAAATGGAACTTCCAACTCACGAGACTAGACGGAAAAATATGTTTCCTCAGAGGATGGCCGGAGTTTGTAAACTTTTATGCCGTTCAACCTGGATATTTCCTCGTGTTCCAGTTGAAAGGAATTTGTTGTTTCAATGTTCTTATTTTCGATACTTCCGCTACCGAAATCGATTATCCAATGCGTCGACTGCCGGTAATCGTTCCTAAAAGCGAAAGCGATGATGAAGGTGAATCTATCCAGATACTACATGAGGAGGTTTTGAAGAAGAGAAGAAGAATGGAGAAGAAAGAGAAAGAAACATCCGCGTATTGCTCCTTGCGGGAGATGAAGAAGAATATGAAGATAAAGATAATGAAGCGTCGAGAGTTCACTACACCTCAAGGATTCAGCGATGACGATGAAGATGAAGATCTGGAAACGGACTACTCACCGAGACAAACTAATTACAGAGCATCAGAGTACAATGAGAGAGAAGACGGCAGATCCAGTCCGGAATCGATGAGACCGATGAATCCACGGAAGACGCAGCAGGTATTAACAGAGAATCAATTGGTAGTTCTGAGGAGAGCGAGTTCGTTCAAATGTAGAACGAAGAACCCTTCATTCATGGTTACAATGAGGCCTTCGTACATCCAAACAGGAAATTGTCTGAGCTTGCCAAGGATCTTTTCAGAGAGATATATAAAGGAATCGGTGGATGTGAAGCTGGAGGTGGGAGATGGTCGGATTTGGAAAGTATGGTGCGGAGTCCGGTGGGCGTTCACACGGCGGCGAACGGAGCTGAAAGGCGGTTGGAAGAGATTCGCGGTTGATAATGAATTGGAAGAAGGGGATATTTGTGTGTTTGAATTAATGAACAAAACCCCTAAAGTTCATTTCCTCGTCACCATTTTCCGTCTTCCAAGTCCTTAG

Coding sequence (CDS)

ATGGGTTTGTTCACTTCTCCAAATCCCCATTTCTTCAAGATCATTCTTCATCAAAATCTCACCCAACAAAAACTTGATCTTCCAAACAAGTTCGTCAAGAACAATGCCCATTCTCTGTTATTCAACAACGCCACTCTTTCCCTTCCCGACGGCTCTAAATGGAACTTCCAACTCACGAGACTAGACGGAAAAATATGTTTCCTCAGAGGATGGCCGGAGTTTGTAAACTTTTATGCCGTTCAACCTGGATATTTCCTCGTGTTCCAGTTGAAAGGAATTTGTTGTTTCAATGTTCTTATTTTCGATACTTCCGCTACCGAAATCGATTATCCAATGCGTCGACTGCCGGTAATCGTTCCTAAAAGCGAAAGCGATGATGAAGGTGAATCTATCCAGATACTACATGAGGAGGTTTTGAAGAAGAGAAGAAGAATGGAGAAGAAAGAGAAAGAAACATCCGCGTATTGCTCCTTGCGGGAGATGAAGAAGAATATGAAGATAAAGATAATGAAGCGTCGAGAGTTCACTACACCTCAAGGATTCAGCGATGACGATGAAGATGAAGATCTGGAAACGGACTACTCACCGAGACAAACTAATTACAGAGCATCAGAGTACAATGAGAGAGAAGACGGCAGATCCAGTCCGGAATCGATGAGACCGATGAATCCACGGAAGACGCAGCAGGTATTAACAGAGAATCAATTGGTAGTTCTGAGGAGAGCGAGTTCGTTCAAATGTAGAACGAAGAACCCTTCATTCATGGTTACAATGAGGCCTTCGTACATCCAAACAGGAAATTGTCTGAGCTTGCCAAGGATCTTTTCAGAGAGATATATAAAGGAATCGGTGGATGTGAAGCTGGAGGTGGGAGATGGTCGGATTTGGAAAGTATGGTGCGGAGTCCGGTGGGCGTTCACACGGCGGCGAACGGAGCTGAAAGGCGGTTGGAAGAGATTCGCGGTTGATAATGAATTGGAAGAAGGGGATATTTGTGTGTTTGAATTAATGAACAAAACCCCTAAAGTTCATTTCCTCGTCACCATTTTCCGTCTTCCAAGTCCTTAG

Protein sequence

MGLFTSPNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTRLDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVPKSESDDEGESIQILHEEVLKKRRRMEKKEKETSAYCSLREMKKNMKIKIMKRREFTTPQGFSDDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPSP*

Homology

[Close]

BLAST of CSPI02G14560 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.7e-26
Identity = 104/361 (28.81%), Postives = 162/361 (44.88%), Query Frame = 0


Query: 7   PNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTRLDGKIC 66
           P P F K+I    + +++L +P+KFV      L    A L++PDG  W   L + D KI 
Sbjct: 2   PRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVA-LTVPDGHVWRVGLRKADNKIW 61

Query: 67  FLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIV------P 126
           F  GW EFV+ Y+++ GY L+F+ +G   F+V IF+ S +EI+Y    L           
Sbjct: 62  FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRA 121

Query: 127 KSESDDEGESIQILHEEVLKKRRRMEKKEKETSAYCSLREMKKNMKIKIMKRREFTTPQG 186
           +   D E E  +++    +      E        Y S         I+ +    FT P  
Sbjct: 122 RLFEDLEDEDAEVIFPSSVYPSPLPESTVPANKGYAS-------SAIQTL----FTGPV- 181

Query: 187 FSDDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRK--------TQQVLT 246
                 +E   T   P++   +    +  E   S+P    P N  K         + V  
Sbjct: 182 ----KAEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTA 241

Query: 247 ENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKE-SVDVKLEVG 306
           E +   +  A +F+    NP F V +RPSY+  G  + LP  F+E+Y+   S  +K+++ 
Sbjct: 242 EERERAINAAKTFE--PTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLA 301

Query: 307 DGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFR 353
           +    K W  VR  +   R +   GW  F ++N L EGD+CVFEL+ +T      VT FR
Sbjct: 302 E----KQW-PVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELL-RTRDFVLKVTAFR 337

[Close]

BLAST of CSPI02G14560 vs. ExPASy Swiss-Prot
Match: Q9XIB4 (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 3.9e-15
Identity = 49/146 (33.56%), Postives = 83/146 (56.85%), Query Frame = 0


Query: 11  FFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTRLDGKICFLRG 70
           F KIIL   + ++ + +P +FV+      L +N TL  P G K + ++ R+  ++ F +G
Sbjct: 34  FIKIILLSRIIEKMMKVPARFVRFGPK--LTDNVTLQTPVGFKRSIRIKRIGDEVWFEKG 93

Query: 71  WPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPM-----RRLPVIVPKSE-- 130
           W EF   +++  G+FL F  +G  CF V+IFD SA+EI+YP+      R  V+    +  
Sbjct: 94  WSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREEVMDDDEQGF 153

Query: 131 -----SDDEGESIQILHEEVLKKRRR 145
                SDD+GE + +  +E+LKK+++
Sbjct: 154 TGFESSDDDGEVVDM--DELLKKKKK 175

[Close]

BLAST of CSPI02G14560 vs. ExPASy Swiss-Prot
Match: Q2R9D2 (B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0197600 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.5e-14
Identity = 100/369 (27.10%), Postives = 161/369 (43.63%), Query Frame = 0


Query: 11  FFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNAT--LSLPD--GSKWNFQLTRLDGKIC 70
           FF+++L    + +++ +P+ F     +  L N  T  +SL D  G+KW+ +LT       
Sbjct: 32  FFRVLLTLQ-SLERMKIPSSF-----NQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFF 91

Query: 71  FLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPV--IVPKSES 130
           F+ GW EFV   ++Q G FLVF       F+V +F+ S  +        P   ++ K+ES
Sbjct: 92  FVHGWKEFVRDNSIQCGQFLVFTYDKRSQFSVTVFEPSGIDKISTFSAHPSKNVIIKTES 151

Query: 131 DDEGESIQILHEE-----------VLKKRRR-----ME------KKEKETSAYCSLREMK 190
           D+ G     +  E           +  KR R     ME      KK  E +   S R  +
Sbjct: 152 DEGGMVTAAITTEKMAPALKENNGITGKRTRDVDYLMEDRVVVFKKSSEANVCESSRRKR 211

Query: 191 KNM---KIKIMK-RREFTTPQGFSDDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPES 250
                 K K+       T     S D+++   ++   P    + + E + R  GR   + 
Sbjct: 212 AGASAGKSKVTSTSHNSTRGSSCSSDEDNSSSKSPNPPFLMRFLSGEVSRR--GRCVSKG 271

Query: 251 MRPMNPRKTQQVLTENQL-VVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSE 310
            R +     ++ +TE +    L+RA  FK  +KNP  +  M  SY+  G  +++P  F  
Sbjct: 272 QRQLTVISQRRPVTEAEKDHALQRAREFK--SKNPFAVQIMMESYVYVGFFMNIPCEFVR 331

Query: 311 RYIKE-SVDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFEL 345
             +   +  + L    G+ W+V     +   R      GGW +FAV N LE+ D+CVFEL
Sbjct: 332 ECLPHTNKRITLWDPQGKAWEV--NYVYYSDRSVGSFSGGWGKFAVGNNLEKFDVCVFEL 388

[Close]

BLAST of CSPI02G14560 vs. ExPASy Swiss-Prot
Match: Q9ZSH7 (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.7e-13
Identity = 49/144 (34.03%), Postives = 77/144 (53.47%), Query Frame = 0


Query: 6   SPNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTRLDGKI 65
           SP   FFK++L   +  + + +P +FVK    S L    TL  P G K + +L R+  +I
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMRIPPRFVKLQG-SKLSEVVTLVTPAGYKRSIKLKRIGEEI 84

Query: 66  CFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVPKSESD 125
            F  GW EF   ++++ G+FL+F+ K    F V+IF+ SA E +YP+  + +I    +SD
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAVHII----DSD 144

Query: 126 DE-----GESIQILHEEVLKKRRR 145
           D+     G+     H+   KKR R
Sbjct: 145 DDVIEITGKEFDTEHKS--KKRPR 161

[Close]

BLAST of CSPI02G14560 vs. ExPASy Swiss-Prot
Match: Q84R27 (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18960 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.0e-11
Identity = 50/186 (26.88%), Postives = 89/186 (47.85%), Query Frame = 0


Query: 6   SPNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTRLDGKI 65
           SP   FFK++L   +  + + +P +FVK    S L    TL  P G K + +L R+  +I
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMKIPPRFVKLQG-SKLSEVVTLETPAGFKRSIKLKRIGEEI 84

Query: 66  CFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVPKSESD 125
            F  GW EF   ++++ G+FL+F+ K    F V+IF+ SA E  YP+  + +I      D
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAVHII------D 144

Query: 126 DEGESIQILHEEVLKKRRRMEKKEKETSAYCSLREMKKNMKI---KIMKRREFTTPQGFS 185
            + + I I  +E +  +   +  +         +  K++  I   KI+   +   P    
Sbjct: 145 SDDDIIDITGKEFVGTQGTRKNNQSVNGGDTEHKSKKRSRDIELDKILHDLDVMNPMHVL 203

Query: 186 DDDEDE 189
            ++E++
Sbjct: 205 KEEEED 203

[Close]

BLAST of CSPI02G14560 vs. ExPASy TrEMBL
Match: A0A0A0LM04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287160 PE=4 SV=1)

HSP 1 Score: 718.0 bits (1852), Expect = 1.9e-203
Identity = 352/355 (99.15%), Postives = 354/355 (99.72%), Query Frame = 0


Query: 1   MGLFTSPNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTR 60
           MGLFTSPNPHFFKI+LHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTR
Sbjct: 1   MGLFTSPNPHFFKIVLHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTR 60

Query: 61  LDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVP 120
           LDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVP
Sbjct: 61  LDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVP 120

Query: 121 KSESDDEGESIQILHEEVLKKRRRMEKKEKETSAYCSLREMKKNMKIKIMKRREFTTPQG 180
           KSESDDEGESIQILHEEVLKKRRRMEKKEKETSAY SLREMKKNMKIKIMKRREFTTPQG
Sbjct: 121 KSESDDEGESIQILHEEVLKKRRRMEKKEKETSAYYSLREMKKNMKIKIMKRREFTTPQG 180

Query: 181 FSDDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQLVVLR 240
           FSDDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQLVV+R
Sbjct: 181 FSDDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQLVVVR 240

Query: 241 RASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIWKVWC 300
           RASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIWKVWC
Sbjct: 241 RASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIWKVWC 300

Query: 301 GVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPSP 356
           GVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPSP
Sbjct: 301 GVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPSP 355

[Close]

BLAST of CSPI02G14560 vs. ExPASy TrEMBL
Match: A0A1S3C614 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=LOC103497436 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.5e-182
Identity = 317/359 (88.30%), Postives = 333/359 (92.76%), Query Frame = 0


Query: 1   MGLFTSPNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTR 60
           MG F SPNPHFFKIILHQNLTQQKLDLPNKFVKNN  SLLFN+  LSLPDG+KWNFQL +
Sbjct: 1   MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMK 60

Query: 61  LDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVP 120
           LDGK CFLRGWPEFV FY++QPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRR PV++P
Sbjct: 61  LDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRPPVLIP 120

Query: 121 KSESDDEGESIQILHEEVLKKRRRMEKKEKETSAYCSLREMKKNMKIKIMKRREFTTPQG 180
           KSES+DE ESI ILHE  LKKR+RMEKKEKETSAYCSLR+MKKNM+IKIMK REFTTPQ 
Sbjct: 121 KSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKIMKHREFTTPQV 180

Query: 181 FS----DDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQL 240
           FS    D+DEDEDLET+YSPRQTNYR S YNE EDGRSSPESMRPMNPRK  QVLTENQL
Sbjct: 181 FSDEDEDEDEDEDLETNYSPRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQL 240

Query: 241 VVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIW 300
           VVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKES+DVKLEVGDGRIW
Sbjct: 241 VVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRIW 300

Query: 301 KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPSP 356
           KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFEL+NKTPKVHF VTIFRLP+P
Sbjct: 301 KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNP 359

[Close]

BLAST of CSPI02G14560 vs. ExPASy TrEMBL
Match: A0A5A7TS22 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002630 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.4e-140
Identity = 261/356 (73.31%), Postives = 289/356 (81.18%), Query Frame = 0


Query: 3   LFTSPNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTRLD 62
           LF+SPNPHFFK+ILHQ LTQQKL+LPNKFVKNN  S+LFN  TL LPDG+ W  QL + D
Sbjct: 4   LFSSPNPHFFKVILHQTLTQQKLELPNKFVKNNGGSMLFNKVTLFLPDGANWKIQLKKSD 63

Query: 63  GKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVPKS 122
           GKI F RGWPEFV FY+VQPGYFLVFQLKGICCFNVLIFDTSATEIDYP+R L  I+PKS
Sbjct: 64  GKIFFRRGWPEFVQFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPIRGLLDIIPKS 123

Query: 123 ESDDEGESIQILHEEVLKKRRRMEKKEKETSAYCSLR----EMKKNMKIKIMKRREFTTP 182
            ++DE ESIQIL+E VLKKRR   +KE+ET AY SLR     M+KN K+KI K R     
Sbjct: 124 RNEDEEESIQILNEMVLKKRRM--EKEEETPAYRSLRGLKKMMRKNAKVKIAKNR----- 183

Query: 183 QGFSDDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQLVV 242
            G + D+++EDLETD S RQ+N+R + YNE +DGR SPESMRPMNPRKT   LTENQL V
Sbjct: 184 -GITSDEDEEDLETDNSRRQSNHRGTAYNEGDDGRVSPESMRPMNPRKTPPALTENQLAV 243

Query: 243 LRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIWKV 302
            +RAS FK R  NPSFMVTMRPSYIQTGN LSLPR F ERYIKESVDVKLEVGDGR W+V
Sbjct: 244 KKRASRFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGERYIKESVDVKLEVGDGRSWRV 303

Query: 303 WCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPS 355
           WCGVRWAFTRRRTELKGGWKRFAVDNEL+EGDICVFELM K   V F V IFRLP+
Sbjct: 304 WCGVRWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMEKNDAVLFKVAIFRLPN 351

[Close]

BLAST of CSPI02G14560 vs. ExPASy TrEMBL
Match: A0A1S3C6V0 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=LOC103497522 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.4e-140
Identity = 261/356 (73.31%), Postives = 289/356 (81.18%), Query Frame = 0


Query: 3   LFTSPNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTRLD 62
           LF+SPNPHFFK+ILHQ LTQQKL+LPNKFVKNN  S+LFN  TL LPDG+ W  QL + D
Sbjct: 43  LFSSPNPHFFKVILHQTLTQQKLELPNKFVKNNGGSMLFNKVTLFLPDGANWKIQLKKSD 102

Query: 63  GKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVPKS 122
           GKI F RGWPEFV FY+VQPGYFLVFQLKGICCFNVLIFDTSATEIDYP+R L  I+PKS
Sbjct: 103 GKIFFRRGWPEFVQFYSVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPIRGLLDIIPKS 162

Query: 123 ESDDEGESIQILHEEVLKKRRRMEKKEKETSAYCSLR----EMKKNMKIKIMKRREFTTP 182
            ++DE ESIQIL+E VLKKRR   +KE+ET AY SLR     M+KN K+KI K R     
Sbjct: 163 RNEDEEESIQILNEMVLKKRRM--EKEEETPAYRSLRGLKKMMRKNAKVKIAKNR----- 222

Query: 183 QGFSDDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQLVV 242
            G + D+++EDLETD S RQ+N+R + YNE +DGR SPESMRPMNPRKT   LTENQL V
Sbjct: 223 -GITSDEDEEDLETDNSRRQSNHRGTAYNEGDDGRVSPESMRPMNPRKTPPALTENQLAV 282

Query: 243 LRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIWKV 302
            +RAS FK R  NPSFMVTMRPSYIQTGN LSLPR F ERYIKESVDVKLEVGDGR W+V
Sbjct: 283 KKRASRFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGERYIKESVDVKLEVGDGRSWRV 342

Query: 303 WCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPS 355
           WCGVRWAFTRRRTELKGGWKRFAVDNEL+EGDICVFELM K   V F V IFRLP+
Sbjct: 343 WCGVRWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMEKNDAVLFKVAIFRLPN 390

[Close]

BLAST of CSPI02G14560 vs. ExPASy TrEMBL
Match: A0A0A0LMR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292230 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 2.3e-140
Identity = 261/355 (73.52%), Postives = 287/355 (80.85%), Query Frame = 0


Query: 3   LFTSPNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTRLD 62
           LF SPNPHFFK+ILHQ LTQQKLDLPNKFVKNN  SLLFN  TL LPDG+ W  QL +LD
Sbjct: 4   LFRSPNPHFFKVILHQTLTQQKLDLPNKFVKNNGGSLLFNKVTLFLPDGANWKIQLKKLD 63

Query: 63  GKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVPKS 122
           GKICF RGWPEFV FY+VQPG+FLVFQLKGICCFNVLIFDTSATEIDYP+RRL  ++PKS
Sbjct: 64  GKICFRRGWPEFVQFYSVQPGHFLVFQLKGICCFNVLIFDTSATEIDYPIRRLLDLIPKS 123

Query: 123 ESDDEGESIQILHEEVLKKRRRMEKKEKETSAYCSLR----EMKKNMKIKIMKRREFTTP 182
            ++DE ESIQIL+E VLKK RRMEK+E+   AY SLR     M+KN K+KI K R     
Sbjct: 124 RNEDEEESIQILNEMVLKK-RRMEKEEETPPAYRSLRGLKKMMRKNAKVKIAKNR----- 183

Query: 183 QGFSDDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQLVV 242
            G + D+++ DLE D S RQ+N+R   YNE +DGR SPESMRPMNPRKT   LTENQL V
Sbjct: 184 -GITSDEDEGDLEMDNSRRQSNHRGIVYNEGDDGRVSPESMRPMNPRKTPPALTENQLAV 243

Query: 243 LRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIWKV 302
            +RAS FK R  NPSFMVTMRPSYIQTGN LSLPR F E+YIKESVDVKLEVGDGR W+V
Sbjct: 244 KKRASWFKSRRNNPSFMVTMRPSYIQTGNYLSLPRRFGEKYIKESVDVKLEVGDGRCWRV 303

Query: 303 WCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLP 354
           WCGVRWAFTRRRTELKGGWKRFAVDNEL+EGDICVFELM K   V F V IFRLP
Sbjct: 304 WCGVRWAFTRRRTELKGGWKRFAVDNELKEGDICVFELMKKNGSVLFKVAIFRLP 351

[Close]

BLAST of CSPI02G14560 vs. NCBI nr
Match: XP_004148065.1 (B3 domain-containing transcription factor VRN1 isoform X2 [Cucumis sativus] >KGN62034.1 hypothetical protein Csa_006117 [Cucumis sativus])

HSP 1 Score: 718.0 bits (1852), Expect = 4.0e-203
Identity = 352/355 (99.15%), Postives = 354/355 (99.72%), Query Frame = 0


Query: 1   MGLFTSPNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTR 60
           MGLFTSPNPHFFKI+LHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTR
Sbjct: 1   MGLFTSPNPHFFKIVLHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTR 60

Query: 61  LDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVP 120
           LDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVP
Sbjct: 61  LDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVP 120

Query: 121 KSESDDEGESIQILHEEVLKKRRRMEKKEKETSAYCSLREMKKNMKIKIMKRREFTTPQG 180
           KSESDDEGESIQILHEEVLKKRRRMEKKEKETSAY SLREMKKNMKIKIMKRREFTTPQG
Sbjct: 121 KSESDDEGESIQILHEEVLKKRRRMEKKEKETSAYYSLREMKKNMKIKIMKRREFTTPQG 180

Query: 181 FSDDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQLVVLR 240
           FSDDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQLVV+R
Sbjct: 181 FSDDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQLVVVR 240

Query: 241 RASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIWKVWC 300
           RASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIWKVWC
Sbjct: 241 RASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIWKVWC 300

Query: 301 GVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPSP 356
           GVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPSP
Sbjct: 301 GVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPSP 355

[Close]

BLAST of CSPI02G14560 vs. NCBI nr
Match: XP_011649360.1 (B3 domain-containing transcription factor VRN1 isoform X1 [Cucumis sativus])

HSP 1 Score: 703.7 bits (1815), Expect = 7.8e-199
Identity = 352/381 (92.39%), Postives = 354/381 (92.91%), Query Frame = 0


Query: 1   MGLFTSPNPHFFKIILHQNLTQQKL--------------------------DLPNKFVKN 60
           MGLFTSPNPHFFKI+LHQNLTQQKL                          DLPNKFVKN
Sbjct: 1   MGLFTSPNPHFFKIVLHQNLTQQKLVSTNQTNKFFKSHSLITLFFFLLLQQDLPNKFVKN 60

Query: 61  NAHSLLFNNATLSLPDGSKWNFQLTRLDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGIC 120
           NAHSLLFNNATLSLPDGSKWNFQLTRLDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGIC
Sbjct: 61  NAHSLLFNNATLSLPDGSKWNFQLTRLDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGIC 120

Query: 121 CFNVLIFDTSATEIDYPMRRLPVIVPKSESDDEGESIQILHEEVLKKRRRMEKKEKETSA 180
           CFNVLIFDTSATEIDYPMRRLPVIVPKSESDDEGESIQILHEEVLKKRRRMEKKEKETSA
Sbjct: 121 CFNVLIFDTSATEIDYPMRRLPVIVPKSESDDEGESIQILHEEVLKKRRRMEKKEKETSA 180

Query: 181 YCSLREMKKNMKIKIMKRREFTTPQGFSDDDEDEDLETDYSPRQTNYRASEYNEREDGRS 240
           Y SLREMKKNMKIKIMKRREFTTPQGFSDDDEDEDLETDYSPRQTNYRASEYNEREDGRS
Sbjct: 181 YYSLREMKKNMKIKIMKRREFTTPQGFSDDDEDEDLETDYSPRQTNYRASEYNEREDGRS 240

Query: 241 SPESMRPMNPRKTQQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRI 300
           SPESMRPMNPRKTQQVLTENQLVV+RRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRI
Sbjct: 241 SPESMRPMNPRKTQQVLTENQLVVVRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRI 300

Query: 301 FSERYIKESVDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVF 356
           FSERYIKESVDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVF
Sbjct: 301 FSERYIKESVDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVF 360

[Close]

BLAST of CSPI02G14560 vs. NCBI nr
Match: XP_008457851.1 (PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo])

HSP 1 Score: 648.7 bits (1672), Expect = 3.0e-182
Identity = 317/359 (88.30%), Postives = 333/359 (92.76%), Query Frame = 0


Query: 1   MGLFTSPNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTR 60
           MG F SPNPHFFKIILHQNLTQQKLDLPNKFVKNN  SLLFN+  LSLPDG+KWNFQL +
Sbjct: 1   MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMK 60

Query: 61  LDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVP 120
           LDGK CFLRGWPEFV FY++QPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRR PV++P
Sbjct: 61  LDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRPPVLIP 120

Query: 121 KSESDDEGESIQILHEEVLKKRRRMEKKEKETSAYCSLREMKKNMKIKIMKRREFTTPQG 180
           KSES+DE ESI ILHE  LKKR+RMEKKEKETSAYCSLR+MKKNM+IKIMK REFTTPQ 
Sbjct: 121 KSESEDEEESIHILHEAALKKRKRMEKKEKETSAYCSLRKMKKNMEIKIMKHREFTTPQV 180

Query: 181 FS----DDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTENQL 240
           FS    D+DEDEDLET+YSPRQTNYR S YNE EDGRSSPESMRPMNPRK  QVLTENQL
Sbjct: 181 FSDEDEDEDEDEDLETNYSPRQTNYRGSAYNESEDGRSSPESMRPMNPRKAPQVLTENQL 240

Query: 241 VVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGRIW 300
           VVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKES+DVKLEVGDGRIW
Sbjct: 241 VVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESMDVKLEVGDGRIW 300

Query: 301 KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPSP 356
           KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFEL+NKTPKVHF VTIFRLP+P
Sbjct: 301 KVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTPKVHFHVTIFRLPNP 359

[Close]

BLAST of CSPI02G14560 vs. NCBI nr
Match: XP_038902137.1 (B3 domain-containing transcription factor VRN1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 558.5 bits (1438), Expect = 4.1e-155
Identity = 281/361 (77.84%), Postives = 310/361 (85.87%), Query Frame = 0


Query: 1   MGLFTSPNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTR 60
           M LF+SPNPHFFKIILHQNL QQKLDLPNKFVKNN  SLLF+ ATLSLPDG+ W  QL  
Sbjct: 1   MALFSSPNPHFFKIILHQNLIQQKLDLPNKFVKNNGASLLFSKATLSLPDGANWTVQLKN 60

Query: 61  LDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVP 120
           LDGKICFLRGWPEFV FY++QPGYFLVFQL+ ICCFNVLIFDTSATEIDYP R   V++P
Sbjct: 61  LDGKICFLRGWPEFVEFYSIQPGYFLVFQLRRICCFNVLIFDTSATEIDYPTRPPSVLIP 120

Query: 121 KSESDDEGESIQILHEEVLKKRRRMEKKEKETSAYCSLREMK----KNMKIKIMKRREFT 180
           K+E++D  ES++ L+  VLKKR R  +KE++T AYCS REMK    KN+KIKI K R FT
Sbjct: 121 KTENEDGEESVRTLNGAVLKKRSR--EKEEKTVAYCSFREMKKMMRKNVKIKIEKHRGFT 180

Query: 181 TPQGFS--DDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRKTQQVLTEN 240
           T QGFS  D+DEDEDLET+YS RQ+ YR S YNE +DGR SPE+MRPMNPRKT  VLTEN
Sbjct: 181 TSQGFSYEDEDEDEDLETNYSRRQSTYRGSAYNEGDDGRFSPETMRPMNPRKTPPVLTEN 240

Query: 241 QLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKESVDVKLEVGDGR 300
           QLVVLRRA SFKCRT NPSFMVTMRPSYIQTGN LS+PRIF+ERYIKES+DVKLE+GDGR
Sbjct: 241 QLVVLRRARSFKCRTNNPSFMVTMRPSYIQTGNYLSIPRIFAERYIKESMDVKLEIGDGR 300

Query: 301 IWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFRLPS 356
            W+V CGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFEL+NKT KVHF VTIFRLPS
Sbjct: 301 SWRVLCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELINKTTKVHFHVTIFRLPS 359

[Close]

BLAST of CSPI02G14560 vs. NCBI nr
Match: XP_038902136.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 543.5 bits (1399), Expect = 1.4e-150
Identity = 281/389 (72.24%), Postives = 310/389 (79.69%), Query Frame = 0


Query: 1   MGLFTSPNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTR 60
           M LF+SPNPHFFKIILHQNL QQKLDLPNKFVKNN  SLLF+ ATLSLPDG+ W  QL  
Sbjct: 1   MALFSSPNPHFFKIILHQNLIQQKLDLPNKFVKNNGASLLFSKATLSLPDGANWTVQLKN 60

Query: 61  LDGKICFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVP 120
           LDGKICFLRGWPEFV FY++QPGYFLVFQL+ ICCFNVLIFDTSATEIDYP R   V++P
Sbjct: 61  LDGKICFLRGWPEFVEFYSIQPGYFLVFQLRRICCFNVLIFDTSATEIDYPTRPPSVLIP 120

Query: 121 KSESDDEGESIQILHEEVLKKRRRMEKKEKETSAYCSLREMK----KNMKIKIMKRREFT 180
           K+E++D  ES++ L+  VLKKR R  +KE++T AYCS REMK    KN+KIKI K R FT
Sbjct: 121 KTENEDGEESVRTLNGAVLKKRSR--EKEEKTVAYCSFREMKKMMRKNVKIKIEKHRGFT 180

Query: 181 TPQGFS--DDDEDEDLETDYSPRQTNYRA----------------------------SEY 240
           T QGFS  D+DEDEDLET+YS RQ+ YR                             S Y
Sbjct: 181 TSQGFSYEDEDEDEDLETNYSRRQSTYRGSGLFRLISLKFNLNFTYQYLKLDEYLPISAY 240

Query: 241 NEREDGRSSPESMRPMNPRKTQQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTG 300
           NE +DGR SPE+MRPMNPRKT  VLTENQLVVLRRA SFKCRT NPSFMVTMRPSYIQTG
Sbjct: 241 NEGDDGRFSPETMRPMNPRKTPPVLTENQLVVLRRARSFKCRTNNPSFMVTMRPSYIQTG 300

Query: 301 NCLSLPRIFSERYIKESVDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNEL 356
           N LS+PRIF+ERYIKES+DVKLE+GDGR W+V CGVRWAFTRRRTELKGGWKRFAVDNEL
Sbjct: 301 NYLSIPRIFAERYIKESMDVKLEIGDGRSWRVLCGVRWAFTRRRTELKGGWKRFAVDNEL 360

[Close]

BLAST of CSPI02G14560 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 120.6 bits (301), Expect = 2.6e-27
Identity = 104/361 (28.81%), Postives = 162/361 (44.88%), Query Frame = 0


Query: 7   PNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTRLDGKIC 66
           P P F K+I    + +++L +P+KFV      L    A L++PDG  W   L + D KI 
Sbjct: 2   PRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVA-LTVPDGHVWRVGLRKADNKIW 61

Query: 67  FLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIV------P 126
           F  GW EFV+ Y+++ GY L+F+ +G   F+V IF+ S +EI+Y    L           
Sbjct: 62  FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRA 121

Query: 127 KSESDDEGESIQILHEEVLKKRRRMEKKEKETSAYCSLREMKKNMKIKIMKRREFTTPQG 186
           +   D E E  +++    +      E        Y S         I+ +    FT P  
Sbjct: 122 RLFEDLEDEDAEVIFPSSVYPSPLPESTVPANKGYAS-------SAIQTL----FTGPV- 181

Query: 187 FSDDDEDEDLETDYSPRQTNYRASEYNEREDGRSSPESMRPMNPRK--------TQQVLT 246
                 +E   T   P++   +    +  E   S+P    P N  K         + V  
Sbjct: 182 ----KAEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTA 241

Query: 247 ENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKE-SVDVKLEVG 306
           E +   +  A +F+    NP F V +RPSY+  G  + LP  F+E+Y+   S  +K+++ 
Sbjct: 242 EERERAINAAKTFE--PTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLA 301

Query: 307 DGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVHFLVTIFR 353
           +    K W  VR  +   R +   GW  F ++N L EGD+CVFEL+ +T      VT FR
Sbjct: 302 E----KQW-PVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELL-RTRDFVLKVTAFR 337

[Close]

BLAST of CSPI02G14560 vs. TAIR 10
Match: AT1G49475.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 84.0 bits (206), Expect = 2.7e-16
Identity = 49/146 (33.56%), Postives = 83/146 (56.85%), Query Frame = 0


Query: 11  FFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTRLDGKICFLRG 70
           F KIIL   + ++ + +P +FV+      L +N TL  P G K + ++ R+  ++ F +G
Sbjct: 34  FIKIILLSRIIEKMMKVPARFVRFGPK--LTDNVTLQTPVGFKRSIRIKRIGDEVWFEKG 93

Query: 71  WPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPM-----RRLPVIVPKSE-- 130
           W EF   +++  G+FL F  +G  CF V+IFD SA+EI+YP+      R  V+    +  
Sbjct: 94  WSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREEVMDDDEQGF 153

Query: 131 -----SDDEGESIQILHEEVLKKRRR 145
                SDD+GE + +  +E+LKK+++
Sbjct: 154 TGFESSDDDGEVVDM--DELLKKKKK 175

[Close]

BLAST of CSPI02G14560 vs. TAIR 10
Match: AT4G01580.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 77.0 bits (188), Expect = 3.4e-14
Identity = 49/144 (34.03%), Postives = 77/144 (53.47%), Query Frame = 0


Query: 6   SPNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTRLDGKI 65
           SP   FFK++L   +  + + +P +FVK    S L    TL  P G K + +L R+  +I
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMRIPPRFVKLQG-SKLSEVVTLVTPAGYKRSIKLKRIGEEI 84

Query: 66  CFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVPKSESD 125
            F  GW EF   ++++ G+FL+F+ K    F V+IF+ SA E +YP+  + +I    +SD
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAVHII----DSD 144

Query: 126 DE-----GESIQILHEEVLKKRRR 145
           D+     G+     H+   KKR R
Sbjct: 145 DDVIEITGKEFDTEHKS--KKRPR 161

[Close]

BLAST of CSPI02G14560 vs. TAIR 10
Match: AT3G18960.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-12
Identity = 50/186 (26.88%), Postives = 89/186 (47.85%), Query Frame = 0


Query: 6   SPNPHFFKIILHQNLTQQKLDLPNKFVKNNAHSLLFNNATLSLPDGSKWNFQLTRLDGKI 65
           SP   FFK++L   +  + + +P +FVK    S L    TL  P G K + +L R+  +I
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMKIPPRFVKLQG-SKLSEVVTLETPAGFKRSIKLKRIGEEI 84

Query: 66  CFLRGWPEFVNFYAVQPGYFLVFQLKGICCFNVLIFDTSATEIDYPMRRLPVIVPKSESD 125
            F  GW EF   ++++ G+FL+F+ K    F V+IF+ SA E  YP+  + +I      D
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLDAVHII------D 144

Query: 126 DEGESIQILHEEVLKKRRRMEKKEKETSAYCSLREMKKNMKI---KIMKRREFTTPQGFS 185
            + + I I  +E +  +   +  +         +  K++  I   KI+   +   P    
Sbjct: 145 SDDDIIDITGKEFVGTQGTRKNNQSVNGGDTEHKSKKRSRDIELDKILHDLDVMNPMHVL 203

Query: 186 DDDEDE 189
            ++E++
Sbjct: 205 KEEEED 203

[Close]

BLAST of CSPI02G14560 vs. TAIR 10
Match: AT1G49480.1 (related to vernalization1 1 )

HSP 1 Score: 69.7 bits (169), Expect = 5.4e-12
Identity = 44/128 (34.38%), Postives = 69/128 (53.91%), Query Frame = 0


Query: 226 KTQQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFSERYIKE-SV 285
           + + V  E +   +  A +F+    NP F V +RPSY+  G  + LP  F+E+Y+   S 
Sbjct: 103 RKRTVTAEERERAVNAAKTFE--PTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISG 162

Query: 286 DVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFELMNKTPKVH 345
            +KL++G+    K W  VR  +   R +   GW  F ++N + EGD+CVFEL+ +T    
Sbjct: 163 FIKLQLGE----KQW-PVRCLYKAGRAKFSQGWYEFTLENNIGEGDVCVFELL-RTRDFV 222

Query: 346 FLVTIFRL 353
             VT FR+
Sbjct: 223 LEVTAFRV 222

The following BLAST results are available for this feature:

BLAST of CSPI02G14560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3W1	3.7e-26	28.81	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9XIB4	3.9e-15	33.56	B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49...	[more]
Q2R9D2	2.5e-14	27.10	B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9ZSH7	4.7e-13	34.03	B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01...	[more]
Q84R27	2.0e-11	26.88	B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18...	[more]

BLAST of CSPI02G14560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM04	1.9e-203	99.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287160 PE=4 SV=1	[more]
A0A1S3C614	1.5e-182	88.30	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A5A7TS22	1.4e-140	73.31	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo var. makuwa ...	[more]
A0A1S3C6V0	1.4e-140	73.31	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0A0LMR6	2.3e-140	73.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292230 PE=4 SV=1	[more]

BLAST of CSPI02G14560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148065.1	4.0e-203	99.15	B3 domain-containing transcription factor VRN1 isoform X2 [Cucumis sativus] >KGN...	[more]
XP_011649360.1	7.8e-199	92.39	B3 domain-containing transcription factor VRN1 isoform X1 [Cucumis sativus]	[more]
XP_008457851.1	3.0e-182	88.30	PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo]	[more]
XP_038902137.1	4.1e-155	77.84	B3 domain-containing transcription factor VRN1-like isoform X2 [Benincasa hispid...	[more]
XP_038902136.1	1.4e-150	72.24	B3 domain-containing transcription factor VRN1-like isoform X1 [Benincasa hispid...	[more]

BLAST of CSPI02G14560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18990.1	2.6e-27	28.81	AP2/B3-like transcriptional factor family protein	[more]
AT1G49475.1	2.7e-16	33.56	AP2/B3-like transcriptional factor family protein	[more]
AT4G01580.1	3.4e-14	34.03	AP2/B3-like transcriptional factor family protein	[more]
AT3G18960.1	1.4e-12	26.88	AP2/B3-like transcriptional factor family protein	[more]
AT1G49480.1	5.4e-12	34.38	related to vernalization1 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 131..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..230
None	No IPR available	PANTHER	PTHR31920:SF26	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	coord: 4..351
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 4..351
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 254..353 e-value: 3.1E-11 score: 53.3 coord: 11..104 e-value: 4.0E-10 score: 49.7
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 254..351 e-value: 5.1E-18 score: 64.8 coord: 11..103 e-value: 4.7E-11 score: 42.4
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 10..104 score: 10.729071
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 254..353 score: 13.253239
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 252..351 e-value: 2.99126E-22 score: 87.7684
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 9..102 e-value: 1.19231E-14 score: 66.9677
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 230..352 e-value: 8.9E-29 score: 101.7
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 3..105 e-value: 5.8E-21 score: 76.3
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 4..104
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 249..352

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G14560.1	CSPI02G14560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding