CSPI02G13050 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCCAACGAGTACTCTATTTTCTAAATCAAGATCCATATCAAGCAAAGCACCGCTCAAACTCACTCACTCTTCTCTTGTTTCAAGTAAATTTTCGATATGGGAATCCGTCTGCCATCGATTCTTCTCAACGCCAAGCAGATTTTGAAAATGCAAGCTATGTCAGCCAGAAATCAATTTGATGTTCCCAAAGGCCATATTGCAGTTTATGTGGGTGAGATTCAAAGGAAGAGATTTGTTGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTACTCAATAGATCAGAAGAAGAATTTGGATTTTGCCACCCAAGGGGTGGCTTGACGATTCCATGCCGAGAGGATGCTTTCATAAATCTCACTGCTAGGCTGCACACATCATGAAAATAGAAAGAACAAAAAGAAAATGTTATTAATCACAGTTTTGTCATCTCTAACTTTAGGAAGTAGAGTAGGATAATACTGTACAGTTACTCAGTTGTTTGAGCAATGATAGTTATATTCTTCTCTTAGAAAAATGTTTCTCTTCAGCTCATGAATTTCAATTTTTATCAATTACTTTGTTTTTCTTTCAC ATCCAACGAGTACTCTATTTTCTAAATCAAGATCCATATCAAGCAAAGCACCGCTCAAACTCACTCACTCTTCTCTTGTTTCAAGTAAATTTTCGATATGGGAATCCGTCTGCCATCGATTCTTCTCAACGCCAAGCAGATTTTGAAAATGCAAGCTATGTCAGCCAGAAATCAATTTGATGTTCCCAAAGGCCATATTGCAGTTTATGTGGGTGAGATTCAAAGGAAGAGATTTGTTGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTACTCAATAGATCAGAAGAAGAATTTGGATTTTGCCACCCAAGGGGTGGCTTGACGATTCCATGCCGAGAGGATGCTTTCATAAATCTCACTGCTAGGCTGCACACATCATGAAAATAGAAAGAACAAAAAGAAAATGTTATTAATCACAGTTTTGTCATCTCTAACTTTAGGAAGTAGAGTAGGATAATACTGTACAGTTACTCAGTTGTTTGAGCAATGATAGTTATATTCTTCTCTTAGAAAAATGTTTCTCTTCAGCTCATGAATTTCAATTTTTATCAATTACTTTGTTTTTCTTTCAC ATGGGAATCCGTCTGCCATCGATTCTTCTCAACGCCAAGCAGATTTTGAAAATGCAAGCTATGTCAGCCAGAAATCAATTTGATGTTCCCAAAGGCCATATTGCAGTTTATGTGGGTGAGATTCAAAGGAAGAGATTTGTTGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTACTCAATAGATCAGAAGAAGAATTTGGATTTTGCCACCCAAGGGGTGGCTTGACGATTCCATGCCGAGAGGATGCTTTCATAAATCTCACTGCTAGGCTGCACACATCATGA MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPRGGLTIPCREDAFINLTARLHTS* Homology
BLAST of CSPI02G13050 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.1e-23 Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 0
BLAST of CSPI02G13050 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.1e-23 Identity = 54/87 (62.07%), Postives = 65/87 (74.71%), Query Frame = 0
BLAST of CSPI02G13050 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 4.0e-23 Identity = 52/86 (60.47%), Postives = 63/86 (73.26%), Query Frame = 0
BLAST of CSPI02G13050 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 5.3e-23 Identity = 53/85 (62.35%), Postives = 63/85 (74.12%), Query Frame = 0
BLAST of CSPI02G13050 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 9.0e-23 Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of CSPI02G13050 vs. ExPASy TrEMBL
Match: A0A0A0LM74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258830 PE=3 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.2e-47 Identity = 95/97 (97.94%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of CSPI02G13050 vs. ExPASy TrEMBL
Match: A0A5A7TQ57 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001750 PE=3 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 9.3e-47 Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of CSPI02G13050 vs. ExPASy TrEMBL
Match: A0A1S4E2E4 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC107991554 PE=3 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 9.3e-47 Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of CSPI02G13050 vs. ExPASy TrEMBL
Match: A0A6J1CYI0 (auxin-responsive protein SAUR21-like OS=Momordica charantia OX=3673 GN=LOC111015450 PE=3 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 4.6e-46 Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of CSPI02G13050 vs. ExPASy TrEMBL
Match: A0A5D3BIN4 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001760 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45 Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of CSPI02G13050 vs. NCBI nr
Match: XP_031736840.1 (auxin-responsive protein SAUR21 [Cucumis sativus] >KAE8651888.1 hypothetical protein Csa_005909 [Cucumis sativus]) HSP 1 Score: 202.2 bits (513), Expect = 2.0e-48 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of CSPI02G13050 vs. NCBI nr
Match: XP_011649278.1 (auxin-responsive protein SAUR21 [Cucumis sativus]) HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46 Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of CSPI02G13050 vs. NCBI nr
Match: XP_016902145.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045683.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYJ99601.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa]) HSP 1 Score: 195.7 bits (496), Expect = 1.9e-46 Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of CSPI02G13050 vs. NCBI nr
Match: XP_038901157.1 (auxin-responsive protein SAUR21-like [Benincasa hispida]) HSP 1 Score: 195.3 bits (495), Expect = 2.5e-46 Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of CSPI02G13050 vs. NCBI nr
Match: XP_023533288.1 (auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 195.3 bits (495), Expect = 2.5e-46 Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of CSPI02G13050 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 119.8 bits (299), Expect = 1.2e-27 Identity = 56/99 (56.57%), Postives = 74/99 (74.75%), Query Frame = 0
BLAST of CSPI02G13050 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 117.1 bits (292), Expect = 8.0e-27 Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 0
BLAST of CSPI02G13050 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.5 bits (280), Expect = 2.0e-25 Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 0
BLAST of CSPI02G13050 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 110.5 bits (275), Expect = 7.5e-25 Identity = 54/87 (62.07%), Postives = 65/87 (74.71%), Query Frame = 0
BLAST of CSPI02G13050 vs. TAIR 10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 110.5 bits (275), Expect = 7.5e-25 Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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