CSPI02G10720 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G10720
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Envelope-like protein
Location	Chr2: 10880757 .. 10881188 (+)
RNA-Seq Expression	CSPI02G10720
Synteny	CSPI02G10720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGAATTGATGGAGCACTCACTTTGTGATTTAGAAAAAATCGCAAGTGAAAATCCATTTTCCTTAATCGAGACCATCGTGGAAAGGAAAATGTCACCAAGCAACTTTCGCAAATGTTGTCTTCACAAAAATCGTTGATTTCCCCTCCTTGTCTCCAATGGTGCCCATGTGCCGGATATTGAGCACATTGTTCGTTCCTCGCGCTTAGCTCCTACTTTTGACTCTGAGTCTGTTGGTTTCTCTGTCACTGCGGTTACTTTGTCTGCTACTGCTGTTTTTCGGATCAAAAACTGTCTTATGGTGGAGTCTCGTGCTCCTGGCACATCTATTGTGTTACTCACTGATCATCATGTTGAGATAAACAATCTTCTTCGTTATTTGAAGTCTGTCTTGTCTGCTTCTGGTGATCCTGGTCTTTCTACATCTTGA

mRNA sequence

ATGAAAGAATTGATGGAGCACTCACTTTGTGATTTAGAAAAAATCGCAAGTGAAAATCCATTTTCCTTAATCGAGACCATCGTGGAAAGGAAAATGTCACCAAGCAACTTTCGCAAATCTCCTACTTTTGACTCTGAGTCTGTTGGTTTCTCTGTCACTGCGGTTACTTTGTCTGCTACTGCTGTTTTTCGGATCAAAAACTGTCTTATGGTGGAGTCTCGTGCTCCTGGCACATCTATTGTGTTACTCACTGATCATCATGTTGAGATAAACAATCTTCTTCGTTATTTGAAGTCTGTCTTGTCTGCTTCTGGTGATCCTGGTCTTTCTACATCTTGA

Coding sequence (CDS)

ATGAAAGAATTGATGGAGCACTCACTTTGTGATTTAGAAAAAATCGCAAGTGAAAATCCATTTTCCTTAATCGAGACCATCGTGGAAAGGAAAATGTCACCAAGCAACTTTCGCAAATCTCCTACTTTTGACTCTGAGTCTGTTGGTTTCTCTGTCACTGCGGTTACTTTGTCTGCTACTGCTGTTTTTCGGATCAAAAACTGTCTTATGGTGGAGTCTCGTGCTCCTGGCACATCTATTGTGTTACTCACTGATCATCATGTTGAGATAAACAATCTTCTTCGTTATTTGAAGTCTGTCTTGTCTGCTTCTGGTGATCCTGGTCTTTCTACATCTTGA

Protein sequence

MKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTLSATAVFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS*

Homology

[Close]

BLAST of CSPI02G10720 vs. ExPASy TrEMBL
Match: A0A0A0LLL2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G196880 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.3e-52
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTLSAT 60
           MKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTLSAT
Sbjct: 4   MKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTLSAT 63

Query: 61  AVFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS 113
           A FRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS
Sbjct: 64  AAFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS 115

[Close]

BLAST of CSPI02G10720 vs. ExPASy TrEMBL
Match: A0A5A7SXP0 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00150 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.3e-04
Identity = 32/77 (41.56%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 28  VERKMSPSNFRKSPTFDSESVGFSVTAVTLSATAVFRIKNCLMVESRAPGTSIVLLTDHH 87
           +E  + PS  R +  FDSE V F+     L      R+ N L  ESRA  TSI LL +  
Sbjct: 445 IEHDIRPS--RNARVFDSEDVNFATEGFNLLGELALRVINTLTAESRALSTSINLLFERR 504

Query: 88  VEINNLLRYLKSVLSAS 105
           +E++NL+R+LKS+LS++
Sbjct: 505 LEVDNLVRHLKSLLSST 519

[Close]

BLAST of CSPI02G10720 vs. NCBI nr
Match: KGN61637.1 (hypothetical protein Csa_006223 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 2.7e-52
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTLSAT 60
           MKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTLSAT
Sbjct: 4   MKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTLSAT 63

Query: 61  AVFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS 113
           A FRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS
Sbjct: 64  AAFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS 115

[Close]

BLAST of CSPI02G10720 vs. NCBI nr
Match: KAA0033955.1 (envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 55.8 bits (133), Expect = 2.7e-04
Identity = 32/77 (41.56%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 28  VERKMSPSNFRKSPTFDSESVGFSVTAVTLSATAVFRIKNCLMVESRAPGTSIVLLTDHH 87
           +E  + PS  R +  FDSE V F+     L      R+ N L  ESRA  TSI LL +  
Sbjct: 445 IEHDIRPS--RNARVFDSEDVNFATEGFNLLGELALRVINTLTAESRALSTSINLLFERR 504

Query: 88  VEINNLLRYLKSVLSAS 105
           +E++NL+R+LKS+LS++
Sbjct: 505 LEVDNLVRHLKSLLSST 519

The following BLAST results are available for this feature:

BLAST of CSPI02G10720 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI02G10720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLL2	1.3e-52	99.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G196880 PE=4 SV=1	[more]
A0A5A7SXP0	1.3e-04	41.56	Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40...	[more]

BLAST of CSPI02G10720 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61637.1	2.7e-52	99.11	hypothetical protein Csa_006223 [Cucumis sativus]	[more]
KAA0033955.1	2.7e-04	41.56	envelope-like protein [Cucumis melo var. makuwa]	[more]

BLAST of CSPI02G10720 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G10720.1	CSPI02G10720.1	mRNA