CSPI02G10660 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAACTCGGTGACTGGAAAGGGAAAGCTGCTGCTTCATCTTCTTCTTCATCCTCAGGTCTGCTCTAAAACCCTAGCTTTTTAATCATTCTTTTGTTTGTATTTGATTCGTGTTCGATGGTTCACAATATCATTATTTGTATGCTCGTATTTATTGAACTATAACATTTTCTTGTCTTCTCTCTCGTTCGCTCTTACACACTAAAAAACCAATACTTCAGCGCCCAAATTAGTGCCATTGTCTAAATTTTCAAAGATCGTTTCTTAGTCTTTCTTTGACGTGAAGAGGGTTTCCTACTTTATTATTCTCCAATTTTATATGATTAGACTTTCATACTTCTTGGTACGATTATTTTGTTACTCGAATTTACTGAATAACGTCGTTACTGATCACGCATTGGTGAACGATAATGGTATAATGGGAAATGGAAGTGGTTTTGTTCGATCATTGTTTATAAAGTTCTTGATTATCCAGGGCATGCTTTGAAATGGTTAAAATTCACTTTTGTTTGTTTCCAAATCACTCCCAAACATTTTTTCAATCCTTCAAAATTAGTTTTGATTGCTTGAATGCTGTGTTTAGAAGTGATTAAATTGATTTTGAATGATTAGAAGCATGTTTGCTTGGAAGTGGTTTTGAAACGTAACAAAATTGATTTTAACTATTTCAAAATCATTCCCACGCTTCTTTATTGGGGACAGAATTTTTTGAGAACTTTGATTGCTGTGAAGGGGATTTTCTTTTTGAGGTGCAAGGAACGTATTGGAGGTTGAGATTTTCAGATATACTGAAGGATTCTATCTATTGTTGTTTGTCGTTTTCTTTGGCTGTCACTTTTAATGTGGGTTTGGAGATGTTGGGGGTTCTCCTGCTGTCATCCCCTGCTTGATTCCCCTTTTACCTTAGAACCACGCTTTCTTAAATATGGTGGCAGAAAAAATACAAGAATAGTGATAATCGGAGTAGAATGTGAGTTTTCTGTTCTAGACTGGCCATAGATTTATGTTGAAGACGATGAAGAGAGTGAATCTGATACATTACTTGTCAAGTCTATTAAATCTTTAAACATGACTAAATCATATGGAAATTTGTTTCTTACGCAAAGGCATGTTGAGTCTTGGGAGAGGAGTGTCACAGTCACTGGCAGTCGTTGACATTGGCCTTTTGGTGCTATTTGTTCTTGGATTTGGAAGTAAATAATAAAATGTCTATTTCTCTACTTCATTTCTCTAAGTTTAGTATCCATATTGAAACGATGAGGGGAGCTTACAATCTTTATGAGATATATGAGTGACTTCCTACTTCCATTTAATTTTGGGATGAACCCTCATATGGGATAGAGATCTATTTTTTGAAGTGTTAGGTATGCATAGCTGGTAATGGTGGGCAACCCTACTAGAAGAGGCTCTTTTCGTTATAATTCTTATTCGAAGTTTGAAAAGTAAAACATTGTAATTCTGTCTCTGATATTGGGAATTATGATAAATTTAGTTCCGTATAATCTGATTTTAGATAAAATGCTGATAACTAGGAATGACCGAAACTGTCTTTTGGATATTTGAAATAAAAATACTAATTGTAAGTCTTGTTCTTCAAGATCTCTGATAGGTTGAACGTTGAAGGAAGTAGGAAAATGTTTCTCAAAGTGCAGTTACCATGGAATGTCATAATTCCTGCTGAAAACTTAGATGCAAAGGGCTTGATGCTCCAGAGGTCAATTATAATCCGTCTACTAGATGAATTTGCCACCAAAAAGGCCACCAAGGATCTCGGCTATTTCCTTGCAGTTACAACTCTAGAAAATATAGGAGAAGGGAAAGTTCGTCAAACAGGTGATGTCTTGTTTCCAGTTATTTTTAGTGGTATCACCTTCAAACTTTATAGGGGAGAGATCTTGGAAGGGGTTGTTCACAAGGTTCTCAAGCATGGTGTTTTCTTGAGATGTGGCCCCGTCGAGAACATTTATCTCTCTTACCTAAAAATGCCAGACTACCGCTATGTGCCGGGCGAGAATCCCGTTTTCCTGAACGACAAGCTCTCAAAGATTGAGAAAGATGTGGTAGTTCGTTTTATTGTGATTGGAACAAAGTGGCTTGAGGCCGAAAGAGAGTTTCAAGCACTTGTAAGTTTGGAAGGTGATTATCTAGGGCCTGTTTCTTAGTGATTTTTTTGGCACTGCAAGTATGTACTCTGTATATATAAACCCAAATCAAGTTTTCTTCAGGATGGAACAATGTGTAGGTGACATTATCAATTGAAGCTAAATGCTTGTAGGAAGTTTCTTTGACGATCAACAGTAGGCCTGTAATGCAATTATGCTATCCTGTTATTTTCTTCATCTTTGTTAAGCTTAAAGACTTGATTTTCATTAAATCTTATGTATCATGCATACAGATATATAATATCTTGGATATTTAATTTCC GAAACTCGGTGACTGGAAAGGGAAAGCTGCTGCTTCATCTTCTTCTTCATCCTCAGATCTCTGATAGGTTGAACGTTGAAGGAAGTAGGAAAATGTTTCTCAAAGTGCAGTTACCATGGAATGTCATAATTCCTGCTGAAAACTTAGATGCAAAGGGCTTGATGCTCCAGAGGTCAATTATAATCCGTCTACTAGATGAATTTGCCACCAAAAAGGCCACCAAGGATCTCGGCTATTTCCTTGCAGTTACAACTCTAGAAAATATAGGAGAAGGGAAAGTTCGTCAAACAGGTGATGTCTTGTTTCCAGTTATTTTTAGTGGTATCACCTTCAAACTTTATAGGGGAGAGATCTTGGAAGGGGTTGTTCACAAGGTTCTCAAGCATGGTGTTTTCTTGAGATGTGGCCCCGTCGAGAACATTTATCTCTCTTACCTAAAAATGCCAGACTACCGCTATGTGCCGGGCGAGAATCCCGTTTTCCTGAACGACAAGCTCTCAAAGATTGAGAAAGATGTGGTAGTTCGTTTTATTGTGATTGGAACAAAGTGGCTTGAGGCCGAAAGAGAGTTTCAAGCACTTGTAAGTTTGGAAGGTGATTATCTAGGGCCTGTTTCTTAGTGATTTTTTTGGCACTGCAAGTATGTACTCTGTATATATAAACCCAAATCAAGTTTTCTTCAGGATGGAACAATGTGTAGGTGACATTATCAATTGAAGCTAAATGCTTGTAGGAAGTTTCTTTGACGATCAACAGTAGGCCTGTAATGCAATTATGCTATCCTGTTATTTTCTTCATCTTTGTTAAGCTTAAAGACTTGATTTTCATTAAATCTTATGTATCATGCATACAGATATATAATATCTTGGATATTTAATTTCC ATGTTTCTCAAAGTGCAGTTACCATGGAATGTCATAATTCCTGCTGAAAACTTAGATGCAAAGGGCTTGATGCTCCAGAGGTCAATTATAATCCGTCTACTAGATGAATTTGCCACCAAAAAGGCCACCAAGGATCTCGGCTATTTCCTTGCAGTTACAACTCTAGAAAATATAGGAGAAGGGAAAGTTCGTCAAACAGGTGATGTCTTGTTTCCAGTTATTTTTAGTGGTATCACCTTCAAACTTTATAGGGGAGAGATCTTGGAAGGGGTTGTTCACAAGGTTCTCAAGCATGGTGTTTTCTTGAGATGTGGCCCCGTCGAGAACATTTATCTCTCTTACCTAAAAATGCCAGACTACCGCTATGTGCCGGGCGAGAATCCCGTTTTCCTGAACGACAAGCTCTCAAAGATTGAGAAAGATGTGGTAGTTCGTTTTATTGTGATTGGAACAAAGTGGCTTGAGGCCGAAAGAGAGTTTCAAGCACTTGTAAGTTTGGAAGGTGATTATCTAGGGCCTGTTTCTTAG MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGEGKVRQTGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPDYRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS* Homology
BLAST of CSPI02G10660 vs. ExPASy Swiss-Prot
Match: A6QRA1 (DNA-directed RNA polymerase V subunit 7 OS=Arabidopsis thaliana OX=3702 GN=NRPE7 PE=1 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 5.1e-77 Identity = 127/176 (72.16%), Postives = 162/176 (92.05%), Query Frame = 0
BLAST of CSPI02G10660 vs. ExPASy Swiss-Prot
Match: Q8LE42 (DNA-directed RNA polymerase IV subunit 7 OS=Arabidopsis thaliana OX=3702 GN=NRPD7 PE=1 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 8.2e-59 Identity = 105/174 (60.34%), Postives = 142/174 (81.61%), Query Frame = 0
BLAST of CSPI02G10660 vs. ExPASy Swiss-Prot
Match: Q6NML5 (DNA-directed RNA polymerase subunit 7-like protein OS=Arabidopsis thaliana OX=3702 GN=NRPB7L PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.9e-24 Identity = 74/193 (38.34%), Postives = 107/193 (55.44%), Query Frame = 0
BLAST of CSPI02G10660 vs. ExPASy Swiss-Prot
Match: P46279 (DNA-directed RNA polymerase II subunit RPB7 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.1e-15 Identity = 50/131 (38.17%), Postives = 79/131 (60.31%), Query Frame = 0
BLAST of CSPI02G10660 vs. ExPASy Swiss-Prot
Match: P38421 (DNA-directed RNA polymerase II subunit 7 OS=Arabidopsis thaliana OX=3702 GN=NRPB7 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 4.7e-14 Identity = 53/165 (32.12%), Postives = 87/165 (52.73%), Query Frame = 0
BLAST of CSPI02G10660 vs. ExPASy TrEMBL
Match: A0A0A0LKQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G193330 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 2.1e-94 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of CSPI02G10660 vs. ExPASy TrEMBL
Match: A0A6J1KYN2 (DNA-directed RNA polymerase V subunit 7 OS=Cucurbita maxima OX=3661 GN=LOC111499394 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 8.1e-94 Identity = 173/175 (98.86%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of CSPI02G10660 vs. ExPASy TrEMBL
Match: A0A5D3CAJ0 (DNA-directed RNA polymerase V subunit 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00140 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 8.1e-94 Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0
BLAST of CSPI02G10660 vs. ExPASy TrEMBL
Match: A0A1S3CNB4 (DNA-directed RNA polymerase V subunit 7 OS=Cucumis melo OX=3656 GN=LOC103502854 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 8.1e-94 Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0
BLAST of CSPI02G10660 vs. ExPASy TrEMBL
Match: A0A6J1H315 (DNA-directed RNA polymerase V subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111459953 PE=4 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.1e-93 Identity = 172/175 (98.29%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of CSPI02G10660 vs. NCBI nr
Match: XP_004150402.1 (DNA-directed RNA polymerase V subunit 7 [Cucumis sativus] >XP_038875656.1 DNA-directed RNA polymerase V subunit 7 [Benincasa hispida] >XP_038875657.1 DNA-directed RNA polymerase V subunit 7 [Benincasa hispida] >KGN61629.1 hypothetical protein Csa_005986 [Cucumis sativus]) HSP 1 Score: 354.8 bits (909), Expect = 4.4e-94 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of CSPI02G10660 vs. NCBI nr
Match: XP_023006755.1 (DNA-directed RNA polymerase V subunit 7 [Cucurbita maxima] >XP_023006756.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita maxima] >XP_023006757.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita maxima] >XP_023548587.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita pepo subsp. pepo] >XP_023548589.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita pepo subsp. pepo] >XP_023548590.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93 Identity = 173/175 (98.86%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of CSPI02G10660 vs. NCBI nr
Match: XP_008465191.1 (PREDICTED: DNA-directed RNA polymerase V subunit 7 [Cucumis melo] >KAA0057517.1 DNA-directed RNA polymerase V subunit 7 [Cucumis melo var. makuwa] >TYK08198.1 DNA-directed RNA polymerase V subunit 7 [Cucumis melo var. makuwa]) HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93 Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0
BLAST of CSPI02G10660 vs. NCBI nr
Match: XP_022958784.1 (DNA-directed RNA polymerase V subunit 7 [Cucurbita moschata] >XP_022958785.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita moschata] >XP_022958786.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita moschata] >XP_022958787.1 DNA-directed RNA polymerase V subunit 7 [Cucurbita moschata] >KAG6574936.1 DNA-directed RNA polymerase V subunit 7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013504.1 DNA-directed RNA polymerase V subunit 7, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 352.4 bits (903), Expect = 2.2e-93 Identity = 172/175 (98.29%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of CSPI02G10660 vs. NCBI nr
Match: XP_022138329.1 (DNA-directed RNA polymerase V subunit 7 [Momordica charantia]) HSP 1 Score: 352.4 bits (903), Expect = 2.2e-93 Identity = 172/175 (98.29%), Postives = 175/175 (100.00%), Query Frame = 0
BLAST of CSPI02G10660 vs. TAIR 10
Match: AT4G14660.1 (RNA polymerase Rpb7-like, N-terminal domain ) HSP 1 Score: 288.5 bits (737), Expect = 3.6e-78 Identity = 127/176 (72.16%), Postives = 162/176 (92.05%), Query Frame = 0
BLAST of CSPI02G10660 vs. TAIR 10
Match: AT3G22900.1 (RNA polymerase Rpb7-like, N-terminal domain ) HSP 1 Score: 228.0 bits (580), Expect = 5.8e-60 Identity = 105/174 (60.34%), Postives = 142/174 (81.61%), Query Frame = 0
BLAST of CSPI02G10660 vs. TAIR 10
Match: AT4G14520.1 (DNA-directed RNA polymerase II-related ) HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25 Identity = 74/193 (38.34%), Postives = 107/193 (55.44%), Query Frame = 0
BLAST of CSPI02G10660 vs. TAIR 10
Match: AT4G14520.2 (DNA-directed RNA polymerase II-related ) HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25 Identity = 74/193 (38.34%), Postives = 107/193 (55.44%), Query Frame = 0
BLAST of CSPI02G10660 vs. TAIR 10
Match: AT4G14520.3 (DNA-directed RNA polymerase II-related ) HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25 Identity = 74/193 (38.34%), Postives = 107/193 (55.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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