CSPI02G09780 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G09780
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ty3/gypsy retrotransposon protein
Location	Chr2: 9778779 .. 9779849 (+)
RNA-Seq Expression	CSPI02G09780
Synteny	CSPI02G09780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGATTGGTGGAGGAAATGCTGGCATCAGGAGTAATAAGGCCGAGTACAAGCCCTTATTCCAGTCCCGTATTGTTGGTGAGAAAAAAAGATGGAAGTTGGCGCTTTTGTGTAGATTACAGGGCTTTAAATAATGTAACCATACCTAATAAGTTTCTGATCCCAGTGATTGAGGAGTTGTTTGATGAGTTGAATGGAGCTACAATTTTCACGAAGATTCATCTTAAACCAGGGTACCATCAAATTAGGATGCGTACATATGACATTGACAAGACAACATTCAAAACTCATGAGGGTCACTATGAGTTTATGGTAATGTTGTTTGGATTGACCAATGCGTCATCCACTTTCCAATCGTTGATGAACACTATATTCAGACCGTACCTCCGAAAATTCGTATTAGTGTTTTTTGATGATATCTTAATCTATAGTAAGGGGTTGAAAGATCACTTGAATCATTTGAGAGCAATATTGGAAGTACTGAGGAAGAATGAACTGTATGCTAATAAGAAGAAATGCAGCTTTACTCAGTCTCGAGTAAATTACTTGGGACATATTATTTCGGGAGATGGAGTTGAGGTGGATCCTGAAAAGATCATAGTTATAAAGGCGTGGCCAGTTCCTGCTAACGTGAGGGAAGTAAGAGGATTTCTTGGGCTGACTGGATACTATCGCAAGTTTGTCCAGAATTATGGGACAATTGCGGCTCCTTTGACGCAATTATTGAAGATAGGAGGGTTTAAGTGGACAGAAGAAGTTCAAGAAGCGTTCAATAGGCTGAAACAAGCCATGATGACGCTTCTGGTATTGGCTCTGCCTGATTTTAATGTGTCTTTTGAAATAGAAAGCAATGCTTCTGGATATGGATTTGGGGTTGTATTAGTACATAACCAACGTCCAATTGCATATTATAGCCATACATTGGCAGTAAGGGATAGGGTGAAACCTGTATATGAAAGGGAGTTAATGGCAGTAGTAATGGCGGTGCAAAGATGGTGTCCGTACTTATTGGGAAAGAAGTTTCTAGTCAAGACTGATCAACGGTCCTTAAAGTTTCTGTTGGAATAG

mRNA sequence

ATGGAGAGATTGGTGGAGGAAATGCTGGCATCAGGAGTAATAAGGCCGAGTACAAGCCCTTATTCCAGTCCCGTATTGTTGGTGAGAAAAAAAGATGGAAGTTGGCGCTTTTGTGTAGATTACAGGGCTTTAAATAATGTAACCATACCTAATAAGTTTCTGATCCCAGTGATTGAGGAGTTGTTTGATGAGTTGAATGGAGCTACAATTTTCACGAAGATTCATCTTAAACCAGGGTACCATCAAATTAGGATGCGTACATATGACATTGACAAGACAACATTCAAAACTCATGAGGGTCACTATGAGTTTATGGTAATGTTGTTTGGATTGACCAATGCGTCATCCACTTTCCAATCGTTGATGAACACTATATTCAGACCGTACCTCCGAAAATTCGTATTAGTGTTTTTTGATGATATCTTAATCTATAGTAAGGGGTTGAAAGATCACTTGAATCATTTGAGAGCAATATTGGAAGTACTGAGGAAGAATGAACTGTATGCTAATAAGAAGAAATGCAGCTTTACTCAGTCTCGAGTAAATTACTTGGGACATATTATTTCGGGAGATGGAGTTGAGGTGGATCCTGAAAAGATCATAGTTATAAAGGCGTGGCCAGTTCCTGCTAACGTGAGGGAAGTAAGAGGATTTCTTGGGCTGACTGGATACTATCGCAAGTTTGTCCAGAATTATGGGACAATTGCGGCTCCTTTGACGCAATTATTGAAGATAGGAGGGTTTAAGTGGACAGAAGAAGTTCAAGAAGCGTTCAATAGGCTGAAACAAGCCATGATGACGCTTCTGGTATTGGCTCTGCCTGATTTTAATGTGTCTTTTGAAATAGAAAGCAATGCTTCTGGATATGGATTTGGGGTTGTATTAGTACATAACCAACGTCCAATTGCATATTATAGCCATACATTGGCAGTAAGGGATAGGGTGAAACCTGTATATGAAAGGGAGTTAATGGCAGTAGTAATGGCGGTGCAAAGATGGTGTCCGTACTTATTGGGAAAGAAGTTTCTAGTCAAGACTGATCAACGGTCCTTAAAGTTTCTGTTGGAATAG

Coding sequence (CDS)

ATGGAGAGATTGGTGGAGGAAATGCTGGCATCAGGAGTAATAAGGCCGAGTACAAGCCCTTATTCCAGTCCCGTATTGTTGGTGAGAAAAAAAGATGGAAGTTGGCGCTTTTGTGTAGATTACAGGGCTTTAAATAATGTAACCATACCTAATAAGTTTCTGATCCCAGTGATTGAGGAGTTGTTTGATGAGTTGAATGGAGCTACAATTTTCACGAAGATTCATCTTAAACCAGGGTACCATCAAATTAGGATGCGTACATATGACATTGACAAGACAACATTCAAAACTCATGAGGGTCACTATGAGTTTATGGTAATGTTGTTTGGATTGACCAATGCGTCATCCACTTTCCAATCGTTGATGAACACTATATTCAGACCGTACCTCCGAAAATTCGTATTAGTGTTTTTTGATGATATCTTAATCTATAGTAAGGGGTTGAAAGATCACTTGAATCATTTGAGAGCAATATTGGAAGTACTGAGGAAGAATGAACTGTATGCTAATAAGAAGAAATGCAGCTTTACTCAGTCTCGAGTAAATTACTTGGGACATATTATTTCGGGAGATGGAGTTGAGGTGGATCCTGAAAAGATCATAGTTATAAAGGCGTGGCCAGTTCCTGCTAACGTGAGGGAAGTAAGAGGATTTCTTGGGCTGACTGGATACTATCGCAAGTTTGTCCAGAATTATGGGACAATTGCGGCTCCTTTGACGCAATTATTGAAGATAGGAGGGTTTAAGTGGACAGAAGAAGTTCAAGAAGCGTTCAATAGGCTGAAACAAGCCATGATGACGCTTCTGGTATTGGCTCTGCCTGATTTTAATGTGTCTTTTGAAATAGAAAGCAATGCTTCTGGATATGGATTTGGGGTTGTATTAGTACATAACCAACGTCCAATTGCATATTATAGCCATACATTGGCAGTAAGGGATAGGGTGAAACCTGTATATGAAAGGGAGTTAATGGCAGTAGTAATGGCGGTGCAAAGATGGTGTCCGTACTTATTGGGAAAGAAGTTTCTAGTCAAGACTGATCAACGGTCCTTAAAGTTTCTGTTGGAATAG

Protein sequence

MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNASSTFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSRVNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQRPIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE*

Homology

[Close]

BLAST of CSPI02G09780 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 4.2e-78
Identity = 151/361 (41.83%), Postives = 218/361 (60.39%), Query Frame = 0


Query: 1   MERLVEEMLASGVIRPSTSPYSSPVLLVRKKD-----GSWRFCVDYRALNNVTIPNKFLI 60
           +E  V+EML  G+IR S SPY+SP  +V KK        +R  +DYR LN +TIP+++ I
Sbjct: 222 VENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPI 281

Query: 61  PVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNAS 120
           P ++E+  +L     FT I L  G+HQI M    I KT F T  GHYE++ M FGL NA 
Sbjct: 282 PNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAP 341

Query: 121 STFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCS 180
           +TFQ  MN I RP L K  LV+ DDI+I+S  L +HLN ++ +   L    L     KC 
Sbjct: 342 ATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCE 401

Query: 181 FTQSRVNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTI 240
           F +   N+LGHI++ DG++ +P K+  I ++P+P   +E+R FLGLTGYYRKF+ NY  I
Sbjct: 402 FLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADI 461

Query: 241 AAPLTQLLKIGGFKWTEEVQ--EAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGV 300
           A P+T  LK      T++++  EAF +LK  ++   +L LPDF   F + ++AS    G 
Sbjct: 462 AKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGA 521

Query: 301 VLVHNQRPIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKF 355
           VL  N  PI++ S TL   +      E+EL+A+V A + +  YLLG++FL+ +D + L++
Sbjct: 522 VLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRW 581

[Close]

BLAST of CSPI02G09780 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.1e-73
Identity = 141/361 (39.06%), Postives = 211/361 (58.45%), Query Frame = 0


Query: 1   MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGS-----WRFCVDYRALNNVTIPNKFLI 60
           +E  +++ML  G+IR S SPY+SP+ +V KK  +     +R  +DYR LN +T+ ++  I
Sbjct: 223 VESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPI 282

Query: 61  PVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNAS 120
           P ++E+  +L     FT I L  G+HQI M    + KT F T  GHYE++ M FGL NA 
Sbjct: 283 PNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAP 342

Query: 121 STFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCS 180
           +TFQ  MN I RP L K  LV+ DDI+++S  L +HL  L  + E L K  L     KC 
Sbjct: 343 ATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCE 402

Query: 181 FTQSRVNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTI 240
           F +    +LGH+++ DG++ +PEKI  I+ +P+P   +E++ FLGLTGYYRKF+ N+  I
Sbjct: 403 FLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADI 462

Query: 241 AAPLTQLLK--IGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGV 300
           A P+T+ LK  +       E   AF +LK  +    +L +PDF   F + ++AS    G 
Sbjct: 463 AKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGA 522

Query: 301 VLVHNQRPIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKF 355
           VL  +  P++Y S TL   +      E+EL+A+V A + +  YLLG+ F + +D + L +
Sbjct: 523 VLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSW 582

[Close]

BLAST of CSPI02G09780 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 7.4e-67
Identity = 139/377 (36.87%), Postives = 213/377 (56.50%), Query Frame = 0


Query: 1   MERLVEEMLASGVIRPSTSPYSSPVLLVRKK-----DGSWRFCVDYRALNNVTIPNKFLI 60
           +ER ++E+L  G+IRPS SPY+SP+ +V KK     +  +R  VD++ LN VTIP+ + I
Sbjct: 139 VERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPI 198

Query: 61  PVIEELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNAS 120
           P I      L  A  FT + L  G+HQI M+  DI KT F T  G YEF+ + FGL NA 
Sbjct: 199 PDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAP 258

Query: 121 STFQSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCS 180
           + FQ +++ I R ++ K   V+ DDI+++S+    H  +LR +L  L K  L  N +K  
Sbjct: 259 AIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSH 318

Query: 181 FTQSRVNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTI 240
           F  ++V +LG+I++ DG++ DP+K+  I   P P +V+E++ FLG+T YYRKF+Q+Y  +
Sbjct: 319 FLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKV 378

Query: 241 AAPLTQLLK--IGGFKWT----------EEVQEAFNRLKQAMMTLLVLALPDFNVSFEIE 300
           A PLT L +      K +          E   ++FN LK  + +  +LA P F   F + 
Sbjct: 379 AKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLT 438

Query: 301 SNASGYGFGVVLVHN----QRPIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLG 356
           ++AS +  G VL  +     RPIAY S +L   +      E+E++A++ ++     YL G
Sbjct: 439 TDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYG 498

[Close]

BLAST of CSPI02G09780 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 6.5e-63
Identity = 134/369 (36.31%), Postives = 209/369 (56.64%), Query Frame = 0


Query: 5   VEEMLASGVIRPSTSPYSSPVLLVRKK------DGSWRFCVDYRALNNVTIPNKFLIPVI 64
           V+++L  G+IRPS SPY+SP  +V KK      + + R  +D+R LN  TIP+++ +P I
Sbjct: 201 VKQLLKDGIIRPSRSPYNSPTWVVDKKGTDAFGNPNKRLVIDFRKLNEKTIPDRYPMPSI 260

Query: 65  EELFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNASSTF 124
             +   L  A  FT + LK GYHQI +  +D +KT+F  + G YEF  + FGL NASS F
Sbjct: 261 PMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIF 320

Query: 125 QSLMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQ 184
           Q  ++ + R  + K   V+ DD++I+S+   DH+ H+  +L+ L    +  +++K  F +
Sbjct: 321 QRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCLIDANMRVSQEKTRFFK 380

Query: 185 SRVNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAP 244
             V YLG I+S DG + DPEK+  I+ +P P  V +VR FLGL  YYR F++++  IA P
Sbjct: 381 ESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARP 440

Query: 245 LTQLLKIGG------------FKWTEEVQEAFNRLKQAMMTL-LVLALPDFNVSFEIESN 304
           +T +LK                ++ E  + AF RL+  + +  ++L  PDF   F++ ++
Sbjct: 441 ITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTD 500

Query: 305 ASGYGFGVVLVHNQRPIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFL-V 354
           AS  G G VL    RPI   S TL   ++     EREL+A+V A+ +   +L G + + +
Sbjct: 501 ASASGIGAVLSQEGRPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINI 560

[Close]

BLAST of CSPI02G09780 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-62
Identity = 138/357 (38.66%), Postives = 198/357 (55.46%), Query Frame = 0


Query: 1   MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEE 60
           + ++V+++L +  I PS SP SSPV+LV KKDG++R CVDYR LN  TI + F +P I+ 
Sbjct: 612 INKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDN 671

Query: 61  LFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNASSTFQS 120
           L   +  A IFT + L  GYHQI M   D  KT F T  G YE+ VM FGL NA STF  
Sbjct: 672 LLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR 731

Query: 121 LMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSR 180
            M   FR    +FV V+ DDILI+S+  ++H  HL  +LE L+   L   KKKC F    
Sbjct: 732 YMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEE 791

Query: 181 VNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLT 240
             +LG+ I    +     K   I+ +P P  V++ + FLG+  YYR+F+ N   IA P+ 
Sbjct: 792 TEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI- 851

Query: 241 QLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVL--VHN 300
           QL      +WTE+  +A ++LK A+    VL   +   ++ + ++AS  G G VL  V N
Sbjct: 852 QLFICDKSQWTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDN 911

Query: 301 QRP----IAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSL 352
           +      + Y+S +L    +  P  E EL+ ++ A+  +   L GK F ++TD  SL
Sbjct: 912 KNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISL 965

[Close]

BLAST of CSPI02G09780 vs. ExPASy TrEMBL
Match: A0A5A7T5N7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00890 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 5.6e-158
Identity = 267/356 (75.00%), Postives = 312/356 (87.64%), Query Frame = 0


Query: 1   MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEE 60
           MERLV+EML SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EE
Sbjct: 52  MERLVDEMLTSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 111

Query: 61  LFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNASSTFQS 120
           LFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEGHYEFMVM FGLTNA STFQ+
Sbjct: 112 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQA 171

Query: 121 LMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSR 180
           LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F +SR
Sbjct: 172 LMNQVFKPFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKSR 231

Query: 181 VNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLT 240
           ++YLGH IS  G+EVDPEKI  +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLT
Sbjct: 232 ISYLGHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLT 291

Query: 241 QLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR 300
           QLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV ++R
Sbjct: 292 QLLKSGAYKWTEETEAAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKR 351

Query: 301 PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE 357
           P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Sbjct: 352 PVAYFSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLE 407

[Close]

BLAST of CSPI02G09780 vs. ExPASy TrEMBL
Match: A0A5D3CXB1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G001180 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 2.1e-157
Identity = 265/356 (74.44%), Postives = 313/356 (87.92%), Query Frame = 0


Query: 1    MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEE 60
            MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EE
Sbjct: 698  MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 757

Query: 61   LFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNASSTFQS 120
            LFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEGHYEFMVM FGLTNA STFQ+
Sbjct: 758  LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQA 817

Query: 121  LMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSR 180
            LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R
Sbjct: 818  LMNQVFKPFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTR 877

Query: 181  VNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLT 240
            ++YLGH IS  G+EVDPEKI  +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLT
Sbjct: 878  ISYLGHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLT 937

Query: 241  QLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR 300
            QLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Sbjct: 938  QLLKSGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKK 997

Query: 301  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE 357
            P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Sbjct: 998  PVAYFSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLE 1053

[Close]

BLAST of CSPI02G09780 vs. ExPASy TrEMBL
Match: A0A5A7U2S1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00940 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 2.1e-157
Identity = 265/356 (74.44%), Postives = 313/356 (87.92%), Query Frame = 0


Query: 1    MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEE 60
            MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EE
Sbjct: 698  MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 757

Query: 61   LFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNASSTFQS 120
            LFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEGHYEFMVM FGLTNA STFQ+
Sbjct: 758  LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQA 817

Query: 121  LMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSR 180
            LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R
Sbjct: 818  LMNQVFKPFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTR 877

Query: 181  VNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLT 240
            ++YLGH IS  G+EVDPEKI  +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLT
Sbjct: 878  ISYLGHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLT 937

Query: 241  QLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR 300
            QLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Sbjct: 938  QLLKSGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKK 997

Query: 301  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE 357
            P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Sbjct: 998  PVAYFSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLE 1053

[Close]

BLAST of CSPI02G09780 vs. ExPASy TrEMBL
Match: A0A5D3DI73 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00700 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 2.1e-157
Identity = 265/356 (74.44%), Postives = 313/356 (87.92%), Query Frame = 0


Query: 1   MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEE 60
           MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EE
Sbjct: 638 MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 697

Query: 61  LFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNASSTFQS 120
           LFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEGHYEFMVM FGLTNA STFQ+
Sbjct: 698 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQA 757

Query: 121 LMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSR 180
           LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R
Sbjct: 758 LMNQVFKPFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTR 817

Query: 181 VNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLT 240
           ++YLGH IS  G+EVDPEKI  +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLT
Sbjct: 818 ISYLGHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLT 877

Query: 241 QLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR 300
           QLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Sbjct: 878 QLLKSGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKK 937

Query: 301 PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE 357
           P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Sbjct: 938 PVAYFSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLE 993

[Close]

BLAST of CSPI02G09780 vs. ExPASy TrEMBL
Match: A0A5A7U6J3 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001310 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 2.1e-157
Identity = 265/356 (74.44%), Postives = 313/356 (87.92%), Query Frame = 0


Query: 1   MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEE 60
           MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EE
Sbjct: 638 MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 697

Query: 61  LFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNASSTFQS 120
           LFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEGHYEFMVM FGLTNA STFQ+
Sbjct: 698 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQA 757

Query: 121 LMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSR 180
           LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R
Sbjct: 758 LMNQVFKPFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTR 817

Query: 181 VNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLT 240
           ++YLGH IS  G+EVDPEKI  +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLT
Sbjct: 818 ISYLGHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLT 877

Query: 241 QLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR 300
           QLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Sbjct: 878 QLLKSGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKK 937

Query: 301 PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE 357
           P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Sbjct: 938 PVAYFSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLE 993

[Close]

BLAST of CSPI02G09780 vs. NCBI nr
Match: KAA0038243.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 567.0 bits (1460), Expect = 1.1e-157
Identity = 267/356 (75.00%), Postives = 312/356 (87.64%), Query Frame = 0


Query: 1   MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEE 60
           MERLV+EML SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EE
Sbjct: 52  MERLVDEMLTSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 111

Query: 61  LFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNASSTFQS 120
           LFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEGHYEFMVM FGLTNA STFQ+
Sbjct: 112 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQA 171

Query: 121 LMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSR 180
           LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F +SR
Sbjct: 172 LMNQVFKPFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKSR 231

Query: 181 VNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLT 240
           ++YLGH IS  G+EVDPEKI  +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLT
Sbjct: 232 ISYLGHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLT 291

Query: 241 QLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR 300
           QLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV ++R
Sbjct: 292 QLLKSGAYKWTEETEAAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKR 351

Query: 301 PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE 357
           P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Sbjct: 352 PVAYFSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLE 407

[Close]

BLAST of CSPI02G09780 vs. NCBI nr
Match: TYK23090.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 565.1 bits (1455), Expect = 4.4e-157
Identity = 265/356 (74.44%), Postives = 313/356 (87.92%), Query Frame = 0


Query: 1   MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEE 60
           MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EE
Sbjct: 638 MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 697

Query: 61  LFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNASSTFQS 120
           LFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEGHYEFMVM FGLTNA STFQ+
Sbjct: 698 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQA 757

Query: 121 LMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSR 180
           LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R
Sbjct: 758 LMNQVFKPFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTR 817

Query: 181 VNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLT 240
           ++YLGH IS  G+EVDPEKI  +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLT
Sbjct: 818 ISYLGHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLT 877

Query: 241 QLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR 300
           QLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Sbjct: 878 QLLKSGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKK 937

Query: 301 PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE 357
           P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Sbjct: 938 PVAYFSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLE 993

[Close]

BLAST of CSPI02G09780 vs. NCBI nr
Match: TYK15990.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 565.1 bits (1455), Expect = 4.4e-157
Identity = 265/356 (74.44%), Postives = 313/356 (87.92%), Query Frame = 0


Query: 1    MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEE 60
            MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EE
Sbjct: 698  MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 757

Query: 61   LFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNASSTFQS 120
            LFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEGHYEFMVM FGLTNA STFQ+
Sbjct: 758  LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQA 817

Query: 121  LMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSR 180
            LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R
Sbjct: 818  LMNQVFKPFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTR 877

Query: 181  VNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLT 240
            ++YLGH IS  G+EVDPEKI  +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLT
Sbjct: 878  ISYLGHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLT 937

Query: 241  QLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR 300
            QLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Sbjct: 938  QLLKSGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKK 997

Query: 301  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE 357
            P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Sbjct: 998  PVAYFSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLE 1053

[Close]

BLAST of CSPI02G09780 vs. NCBI nr
Match: KAA0049776.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 565.1 bits (1455), Expect = 4.4e-157
Identity = 265/356 (74.44%), Postives = 313/356 (87.92%), Query Frame = 0


Query: 1   MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEE 60
           MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EE
Sbjct: 638 MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 697

Query: 61  LFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNASSTFQS 120
           LFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEGHYEFMVM FGLTNA STFQ+
Sbjct: 698 LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQA 757

Query: 121 LMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSR 180
           LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R
Sbjct: 758 LMNQVFKPFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTR 817

Query: 181 VNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLT 240
           ++YLGH IS  G+EVDPEKI  +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLT
Sbjct: 818 ISYLGHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLT 877

Query: 241 QLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR 300
           QLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Sbjct: 878 QLLKSGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKK 937

Query: 301 PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE 357
           P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Sbjct: 938 PVAYFSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLE 993

[Close]

BLAST of CSPI02G09780 vs. NCBI nr
Match: KAA0049630.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 565.1 bits (1455), Expect = 4.4e-157
Identity = 265/356 (74.44%), Postives = 313/356 (87.92%), Query Frame = 0


Query: 1    MERLVEEMLASGVIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPNKFLIPVIEE 60
            MERLV+EML+SG+IRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVT+P+KF IPV+EE
Sbjct: 698  MERLVDEMLSSGIIRPSTSPYSSPVLLVRKKDGSWRFCVDYRALNNVTVPDKFPIPVVEE 757

Query: 61   LFDELNGATIFTKIHLKPGYHQIRMRTYDIDKTTFKTHEGHYEFMVMLFGLTNASSTFQS 120
            LFDELNGA +F+KI LK GYHQIRM   DI+KT F+THEGHYEFMVM FGLTNA STFQ+
Sbjct: 758  LFDELNGADVFSKIDLKAGYHQIRMHPEDIEKTAFRTHEGHYEFMVMPFGLTNAPSTFQA 817

Query: 121  LMNTIFRPYLRKFVLVFFDDILIYSKGLKDHLNHLRAILEVLRKNELYANKKKCSFTQSR 180
            LMN +F+P+LR+FVLVFFDDILIYSKG+++H  HL  +LE+LR++ELYAN  KC F ++R
Sbjct: 818  LMNQVFKPFLRRFVLVFFDDILIYSKGMEEHGQHLEVVLEILRESELYANFDKCHFAKTR 877

Query: 181  VNYLGHIISGDGVEVDPEKIIVIKAWPVPANVREVRGFLGLTGYYRKFVQNYGTIAAPLT 240
            ++YLGH IS  G+EVDPEKI  +K WP PANVRE+RGFLGLTGYYR+FVQNYG+I+APLT
Sbjct: 878  ISYLGHYISKKGIEVDPEKIRAVKEWPAPANVRELRGFLGLTGYYRRFVQNYGSISAPLT 937

Query: 241  QLLKIGGFKWTEEVQEAFNRLKQAMMTLLVLALPDFNVSFEIESNASGYGFGVVLVHNQR 300
            QLLK G +KWTEE + AF +LK+AMMTL VLA+PDFN+ FEIES+ASG+G G VLV +++
Sbjct: 938  QLLKSGAYKWTEETETAFEKLKKAMMTLPVLAMPDFNLPFEIESDASGFGVGAVLVQDKK 997

Query: 301  PIAYYSHTLAVRDRVKPVYERELMAVVMAVQRWCPYLLGKKFLVKTDQRSLKFLLE 357
            P+AY+S  L+ RDR +PVYERELMAVV AVQRW PYLLG+KF VKTDQRSLKFLLE
Sbjct: 998  PVAYFSKVLSTRDRARPVYERELMAVVWAVQRWRPYLLGRKFTVKTDQRSLKFLLE 1053

[Close]

BLAST of CSPI02G09780 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.8e-36
Identity = 71/131 (54.20%), Postives = 91/131 (69.47%), Query Frame = 0


Query: 152 LNHLRAILEVLRKNELYANKKKCSFTQSRVNYLG--HIISGDGVEVDPEKIIVIKAWPVP 211
           +NHL  +L++  +++ YAN+KKC+F Q ++ YLG  HIISG+GV  DP K+  +  WP P
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 212 ANVREVRGFLGLTGYYRKFVQNYGTIAAPLTQLLKIGGFKWTEEVQEAFNRLKQAMMTLL 271
            N  E+RGFLGLTGYYR+FV+NYG I  PLT+LLK    KWTE    AF  LK A+ TL 
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLP 120

Query: 272 VLALPDFNVSF 281
           VLALPD  + F
Sbjct: 121 VLALPDLKLPF 131

[Close]

BLAST of CSPI02G09780 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 9.8e-06
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = 0


Query: 7  EMLASGVIRPSTSPYSSPVLLVRKKDGSW 36
          EML + +I+PS SPYSSPVLLV+KKDG W
Sbjct: 51 EMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:

BLAST of CSPI02G09780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	4.2e-78	41.83	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	1.1e-73	39.06	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	7.4e-67	36.87	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P10401	6.5e-63	36.31	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]
Q99315	1.1e-62	38.66	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of CSPI02G09780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T5N7	5.6e-158	75.00	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CXB1	2.1e-157	74.44	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7U2S1	2.1e-157	74.44	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DI73	2.1e-157	74.44	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7U6J3	2.1e-157	74.44	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of CSPI02G09780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038243.1	1.1e-157	75.00	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK23090.1	4.4e-157	74.44	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK15990.1	4.4e-157	74.44	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0049776.1	4.4e-157	74.44	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0049630.1	4.4e-157	74.44	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of CSPI02G09780 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.8e-36	54.20	DNA/RNA polymerases superfamily protein	[more]
ATMG00850.1	9.8e-06	72.41	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..113 e-value: 1.6E-79 score: 268.1
None	No IPR available	GENE3D	3.10.20.370		coord: 280..346 e-value: 5.3E-5 score: 25.1
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 8..353
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 8..353
None	No IPR available	CDD	cd01647	RT_LTR	coord: 12..188 e-value: 3.49723E-91 score: 268.695
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 198..279 e-value: 1.3E-26 score: 94.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 53..188 e-value: 1.6E-79 score: 268.1
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 28..188 e-value: 1.5E-26 score: 93.3
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 9..188 score: 12.729429
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 250..344 e-value: 1.4E-26 score: 92.4
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..355

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G09780.1	CSPI02G09780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0005768	endosome
molecular_function	GO:0003676	nucleic acid binding