CSPI02G09450 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G09450
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationChr2: 9267957 .. 9269091 (+)
RNA-Seq ExpressionCSPI02G09450
SyntenyCSPI02G09450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATAAGAAACAATGACAAAGCCAAGAGCAAAGAAATCAAGGGCAAAGTCAATGGAACCAGTGGCAAAATAGCAACAGAAGAGGACAAAATAATAATGATGGTGGAAATTGAGGAAGAGGAAGAAAATCTTGGAACAACTCAAACCACAATGCTAAATTTGTGGAAAATTTGGCCACACAACCATGAGATGCTATTTTTTATATGCCCGAACTTTCAAAAACAGTTCACTAGTAATACTCCACCTGGAATGCCAAGGTTCAATAAGCAGGATCAGTTCGGAAATAATCCCCATCAAGCTTATATGAGTTCAACTTCACAAGACAAGAATAGTAATATATGGTATCGTGCAACTAATCACATCACAAATGATCTTGCTAACCTCAATTACAGCACAAACTACAACGAAGTAGAACAAGTTCATGTTGGTAATGGAACAAGTTTAAAAATTCTAAACTCTGGTCATTCTTTCTTTATTCCTTCGGATATTTTAATTTCTCCTAATAATCATTGTCCTATTCTCTCCATACCAAATCTTCTTCATGTTCCCCACATAAAGAAAAATCTCCTAAGTGTAAGTCAATTTACAAAAGATAATAATTGTTTCTTTGAATTCCATCCAACAATTTGTTTTGTTAAGTGTCAGGAAACTGAAAAATTTTTACTCCAAGGACAACTTCATGAAGGACTATATCATTTCTCACTAGTGAAAGCTCATCCCAATTCAGAGTCAGTCACCTCTCATCAATCTCAACTTGAGAAACCACATGCTCTAGTAGTCTCCACAAATCATTTTCCTATCAATTCAAGCACTCAAACTCTTTGGCACAATAGATTAGGCCATCCATCTACTACCGTTGTAAACGAAGTACTAAACAAATGTAATATTTCCTTACCAAATCCAAATAAAATAGCTATAACTTGTCATTCATGTGCTCTTGGAAAAAGTCACAAACTACCCTTTTCCAAATCAAAAACAAATTAATCTGCACCTCTTGAGCTTGTAGAGTCTGATTTATGGGGACCATCACATACCATTTCAAGAAATGGGTTTCGCTATTATATCACCTTTGTTGACATGTTCTCCCGCCACACTTGGATATATTTTCTCCAATCCAAGTCTGAAGCCTTAA

mRNA sequence

ATGTTGATAAGAAACAATGACAAAGCCAAGAGCAAAGAAATCAAGGGCAAAGTCAATGGAACCAGTGGCAAAATAGCAACAGAAGAGGACAAAATAATAATGATGGTGGAAATTGAGGAAGAGGAAGAAAATCTTGGAACAACTCAAACCACAATGCTAAATTTGTGGAAAATTTGGCCACACAACCATGAGATGCTATTTTTTATATGCCCGAACTTTCAAAAACAGTTCACTAGTAATACTCCACCTGGAATGCCAAGGTTCAATAAGCAGGATCAGTTCGGAAATAATCCCCATCAAGCTTATATGAGTTCAACTTCACAAGACAAGAATAGTAATATATGGTATCGTGCAACTAATCACATCACAAATGATCTTGCTAACCTCAATTACAGCACAAACTACAACGAAGTAGAACAAGTTCATGTTGGTAATGGAACAAGTTTAAAAATTCTAAACTCTGGTCATTCTTTCTTTATTCCTTCGGATATTTTAATTTCTCCTAATAATCATTGTCCTATTCTCTCCATACCAAATCTTCTTCATGTTCCCCACATAAAGAAAAATCTCCTAAGTGAAACTGAAAAATTTTTACTCCAAGGACAACTTCATGAAGGACTATATCATTTCTCACTAGTGAAAGCTCATCCCAATTCAGAGTCAGTCACCTCTCATCAATCTCAACTTGAGAAACCACATGCTCTAGTAGTCTCCACAAATCATTTTCCTATCAATTCAAGCACTCAAACTCTTTGGCACAATAGATTAGGCCATCCATCTACTACCGTTGTAAACGAAAGTCTGATTTATGGGGACCATCACATACCATTTCAAGAAATGGGTTTCGCTATTATATCACCTTTGTTGACATGTTCTCCCGCCACACTTGGATATATTTTCTCCAATCCAAGTCTGAAGCCTTAA

Coding sequence (CDS)

ATGTTGATAAGAAACAATGACAAAGCCAAGAGCAAAGAAATCAAGGGCAAAGTCAATGGAACCAGTGGCAAAATAGCAACAGAAGAGGACAAAATAATAATGATGGTGGAAATTGAGGAAGAGGAAGAAAATCTTGGAACAACTCAAACCACAATGCTAAATTTGTGGAAAATTTGGCCACACAACCATGAGATGCTATTTTTTATATGCCCGAACTTTCAAAAACAGTTCACTAGTAATACTCCACCTGGAATGCCAAGGTTCAATAAGCAGGATCAGTTCGGAAATAATCCCCATCAAGCTTATATGAGTTCAACTTCACAAGACAAGAATAGTAATATATGGTATCGTGCAACTAATCACATCACAAATGATCTTGCTAACCTCAATTACAGCACAAACTACAACGAAGTAGAACAAGTTCATGTTGGTAATGGAACAAGTTTAAAAATTCTAAACTCTGGTCATTCTTTCTTTATTCCTTCGGATATTTTAATTTCTCCTAATAATCATTGTCCTATTCTCTCCATACCAAATCTTCTTCATGTTCCCCACATAAAGAAAAATCTCCTAAGTGAAACTGAAAAATTTTTACTCCAAGGACAACTTCATGAAGGACTATATCATTTCTCACTAGTGAAAGCTCATCCCAATTCAGAGTCAGTCACCTCTCATCAATCTCAACTTGAGAAACCACATGCTCTAGTAGTCTCCACAAATCATTTTCCTATCAATTCAAGCACTCAAACTCTTTGGCACAATAGATTAGGCCATCCATCTACTACCGTTGTAAACGAAAGTCTGATTTATGGGGACCATCACATACCATTTCAAGAAATGGGTTTCGCTATTATATCACCTTTGTTGACATGTTCTCCCGCCACACTTGGATATATTTTCTCCAATCCAAGTCTGAAGCCTTAA

Protein sequence

MLIRNNDKAKSKEIKGKVNGTSGKIATEEDKIIMMVEIEEEEENLGTTQTTMLNLWKIWPHNHEMLFFICPNFQKQFTSNTPPGMPRFNKQDQFGNNPHQAYMSSTSQDKNSNIWYRATNHITNDLANLNYSTNYNEVEQVHVGNGTSLKILNSGHSFFIPSDILISPNNHCPILSIPNLLHVPHIKKNLLSETEKFLLQGQLHEGLYHFSLVKAHPNSESVTSHQSQLEKPHALVVSTNHFPINSSTQTLWHNRLGHPSTTVVNESLIYGDHHIPFQEMGFAIISPLLTCSPATLGYIFSNPSLKP*
Homology
BLAST of CSPI02G09450 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-07
Identity = 61/240 (25.42%), Postives = 105/240 (43.75%), Query Frame = 0

Query: 74  QKQFTSNTPPGMPRFNKQDQFGNNPHQAYMSSTSQDKNSNIWY---RATNHITNDLANLN 133
           Q+Q TS   P  PR N      N+P+           N+N W     AT+HIT+D  NL+
Sbjct: 283 QQQSTSPFTPWQPRANLA---VNSPY-----------NANNWLLDSGATHHITSDFNNLS 342

Query: 134 YSTNYNEVEQVHVGNGTSLKILNSGHSFFIPSD-------ILISPNNHCPILSIPNLLHV 193
           +   Y   + V + +G+++ I ++G +    S        +L  PN H  ++S+  L + 
Sbjct: 343 FHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNT 402

Query: 194 PHIKKNLLS--------ETEKFLLQGQLHEGLYHFSLVKAHPNSESVTSHQSQLEKPHAL 253
             +               T   LLQG+  + LY + +     +S++V+   S        
Sbjct: 403 NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIA----SSQAVSMFAS-------- 462

Query: 254 VVSTNHFPINSSTQTLWHNRLGHPSTTVVNESLIYGDHHIPFQEMGFAIISP---LLTCS 293
                  P + +T + WH+RLGHPS  ++N   +  +H +P       +++P   LL+CS
Sbjct: 463 -------PCSKATHSSWHSRLGHPSLAILNS--VISNHSLP-------VLNPSHKLLSCS 480

BLAST of CSPI02G09450 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.8e-06
Identity = 48/182 (26.37%), Postives = 79/182 (43.41%), Query Frame = 0

Query: 111 NSNIWY---RATNHITNDLANLNYSTNYNEVEQVHVGNGTSLKILNSGHSFFIPSDILIS 170
           +SN W     AT+HIT+D  NL+    Y   + V V +G+++ I ++G +         S
Sbjct: 327 SSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGST---------S 386

Query: 171 PNNHCPILSIPNLLHVPHIKKNLLS------------------------ETEKFLLQGQL 230
            +     L++ N+L+VP+I KNL+S                         T   LLQG+ 
Sbjct: 387 LSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKT 446

Query: 231 HEGLYHFSLVKAHPNSESVTSHQSQLEKPHALVVSTNHFPINSSTQTLWHNRLGHPSTTV 266
            + LY + +  + P                   VS    P + +T + WH RLGHP+ ++
Sbjct: 447 KDELYEWPIASSQP-------------------VSLFASPSSKATHSSWHARLGHPAPSI 480

BLAST of CSPI02G09450 vs. ExPASy TrEMBL
Match: A0A5D3CWR9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001470 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 8.8e-35
Identity = 83/116 (71.55%), Postives = 91/116 (78.45%), Query Frame = 0

Query: 85  MPRFNKQDQFGNNPHQAYMSSTSQDKNSNIWY---RATNHITNDLANLNYSTNYNEVEQV 144
           MPRFN Q+QF NN HQAY    +Q  +SN WY    ATNHITNDL NLNYSTNY+ VEQV
Sbjct: 1   MPRFNNQNQFRNNHHQAY----TQHNSSNGWYPDTSATNHITNDLTNLNYSTNYSGVEQV 60

Query: 145 HVGNGTSLKILNSGHSFFIPSDILISPNNHCPILSIPNLLHVPHIKKNLLSETEKF 198
           HV +GT LKILN GHSF IP DI IS +NHCPILS+PN+LHVPHIKKNLLS T KF
Sbjct: 61  HVRDGTGLKILNPGHSFLIPFDISISSDNHCPILSMPNVLHVPHIKKNLLSVTGKF 112

BLAST of CSPI02G09450 vs. ExPASy TrEMBL
Match: A0A5D3CJL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00550 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 9.1e-24
Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 0

Query: 71  PNFQKQFTSNTPPGMPRFNKQDQFGNNPHQAYMSSTSQDKNSNIWY---RATNHITNDLA 130
           PNFQKQFTSNTPPGMP+FN Q+QF NNP+QAYM+STSQD N   WY    ATNHITNDLA
Sbjct: 138 PNFQKQFTSNTPPGMPKFNNQNQFRNNPYQAYMTSTSQDNNG--WYLDIGATNHITNDLA 197

Query: 131 NLNYSTNYNEVEQVHVGNGT 148
           NLNY T+Y+ VEQVH+G+GT
Sbjct: 198 NLNYRTDYSGVEQVHIGDGT 215

BLAST of CSPI02G09450 vs. ExPASy TrEMBL
Match: A0A438FJP6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1134 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-18
Identity = 82/231 (35.50%), Postives = 117/231 (50.65%), Query Frame = 0

Query: 103 MSSTSQDKNSNIWY---RATNHITNDLANLNYSTNYNEVEQVHVGNGTSLKILNSGHSFF 162
           M +T +D  +  W+    ATNH+T+DL NLN    YN   ++H+GNGT LKI + G S F
Sbjct: 482 MVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGNSKIHMGNGTGLKISHIGLSVF 541

Query: 163 IPSDILISPNNHCPILSIPNLLHVPHIKKNLLSETE------------------------ 222
             S    SPN    +L + N+L VP IKKNLLS ++                        
Sbjct: 542 PSSS---SPNK---VLFLKNILRVPAIKKNLLSVSQFARDNNVYFEFHPKVCFVKDKSNH 601

Query: 223 KFLLQGQLHEGLYHFSLVK---AHPNSESVTSHQSQLEKPHALVVSTNH--FP--INSST 282
             LLQG LH+GLY F+L K      +  S+++ +++L   +A +V  ++  FP   NSS 
Sbjct: 602 SLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNELTCCNASLVHNDNSDFPEKTNSSF 661

Query: 283 QT--LWHNRLGHPSTTVVNESLIYGDHHIPFQEMGFAIISPLLTCSPATLG 298
               LWH RLGHP++ +V +  +  D+ IPF     + I     CS   LG
Sbjct: 662 HVFDLWHKRLGHPASKIVTQ--VLNDNKIPFSTKSGSSI-----CSACQLG 699

BLAST of CSPI02G09450 vs. ExPASy TrEMBL
Match: A0A438EA49 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2917 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-18
Identity = 82/231 (35.50%), Postives = 117/231 (50.65%), Query Frame = 0

Query: 103 MSSTSQDKNSNIWY---RATNHITNDLANLNYSTNYNEVEQVHVGNGTSLKILNSGHSFF 162
           M +T +D  +  W+    ATNH+T+DL NLN    YN   ++H+GNGT LKI + G S F
Sbjct: 346 MVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGNSKIHMGNGTGLKISHIGLSVF 405

Query: 163 IPSDILISPNNHCPILSIPNLLHVPHIKKNLLSETE------------------------ 222
             S    SPN    +L + N+L VP IKKNLLS ++                        
Sbjct: 406 PSSS---SPNK---VLFLKNILRVPAIKKNLLSVSQFARDNNVYFEFHPKVCFVKDKSNH 465

Query: 223 KFLLQGQLHEGLYHFSLVK---AHPNSESVTSHQSQLEKPHALVVSTNH--FP--INSST 282
             LLQG LH+GLY F+L K      +  S+++ +++L   +A +V  ++  FP   NSS 
Sbjct: 466 SLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNELTCCNASLVHNDNSDFPEKTNSSF 525

Query: 283 QT--LWHNRLGHPSTTVVNESLIYGDHHIPFQEMGFAIISPLLTCSPATLG 298
               LWH RLGHP++ +V +  +  D+ IPF     + I     CS   LG
Sbjct: 526 HVFDLWHKRLGHPASKIVTQ--VLNDNKIPFSTKSGSSI-----CSACQLG 563

BLAST of CSPI02G09450 vs. ExPASy TrEMBL
Match: A0A5A7SX68 (Calcium-transporting ATPase 9, plasma membrane-type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00470 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.7e-18
Identity = 68/147 (46.26%), Postives = 87/147 (59.18%), Query Frame = 0

Query: 12  KEIKGKVNGT-SGKIATEEDKIIMMVEIEEEEENLGTTQTTMLNLWKIWPHNHEMLFFIC 71
           KEI+  ++GT SGKI TEED+I M++ +  EE N GT Q   +          +      
Sbjct: 12  KEIEINLSGTISGKI-TEEDEIAMVIMV--EERNFGTIQNHNVKCNGFGHTAMKCYSLYD 71

Query: 72  PNFQKQFTSNTPPGMP-------RFNKQDQFGNNPHQAYMSSTSQDKNSNIWY---RATN 131
           PNFQ+QF +   P           FN+Q+  GNN  QAYM+STSQ  N+N WY    A+N
Sbjct: 72  PNFQRQFINTPAPNQTNFGQRFNHFNRQNTTGNNHFQAYMASTSQSNNTNGWYPDTGASN 131

Query: 132 HITNDLANLNYSTNYNEVEQVHVGNGT 148
           H+TNDLANL+  TNYN  EQVHVG+GT
Sbjct: 132 HVTNDLANLSLGTNYNGAEQVHVGDGT 155

BLAST of CSPI02G09450 vs. NCBI nr
Match: KAE8651778.1 (hypothetical protein Csa_006130, partial [Cucumis sativus])

HSP 1 Score: 513.5 bits (1321), Expect = 1.3e-141
Identity = 262/293 (89.42%), Postives = 262/293 (89.42%), Query Frame = 0

Query: 1   MLIRNNDKAKSKEIKGKVNGTSGKIATEEDKIIMMVEIEEEEENLGTTQTTMLNLWKIWP 60
           MLIRNNDKAKSKEIKGKVNGTSGKIATEEDK IMMVEIEEEEENLGTTQTTMLNLWKIWP
Sbjct: 1   MLIRNNDKAKSKEIKGKVNGTSGKIATEEDKTIMMVEIEEEEENLGTTQTTMLNLWKIWP 60

Query: 61  HNHEMLFFICPNFQKQFTSNTPPGMPRFNKQDQFGNNPHQAYMSSTSQDKNSNIWY---R 120
           HNHEMLFFICPNFQKQFTSNTPPGMPRFNKQDQFGNNPHQAYMSSTSQDKNSN WY    
Sbjct: 61  HNHEMLFFICPNFQKQFTSNTPPGMPRFNKQDQFGNNPHQAYMSSTSQDKNSNRWYPDTG 120

Query: 121 ATNHITNDLANLNYSTNYNEVEQVHVGNGTSLKILNSGHSFFIPSDILISPNNHCPILSI 180
           ATNHITNDLANLNYSTNYNEVEQVHVGNGTSLKILNSGHSFFIPSDILISPNNHCPILSI
Sbjct: 121 ATNHITNDLANLNYSTNYNEVEQVHVGNGTSLKILNSGHSFFIPSDILISPNNHCPILSI 180

Query: 181 PNLLHVPHIKKNLLS------------------------ETEKFLLQGQLHEGLYHFSLV 240
           PNLLHVPHIKKNLLS                        ETEKFLLQGQLHEGLY FSLV
Sbjct: 181 PNLLHVPHIKKNLLSVSQFTKDNNCFFEFHPTICFVKCQETEKFLLQGQLHEGLYRFSLV 240

Query: 241 KAHPNSESVTSHQSQLEKPHALVVSTNHFPINSSTQTLWHNRLGHPSTTVVNE 267
           KAHPNSESVTSHQSQLEKPHALVVSTNHFPINSSTQTLWHNRLGHPSTTVVNE
Sbjct: 241 KAHPNSESVTSHQSQLEKPHALVVSTNHFPINSSTQTLWHNRLGHPSTTVVNE 293

BLAST of CSPI02G09450 vs. NCBI nr
Match: KAA0062985.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK16361.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 157.5 bits (397), Expect = 1.8e-34
Identity = 83/116 (71.55%), Postives = 91/116 (78.45%), Query Frame = 0

Query: 85  MPRFNKQDQFGNNPHQAYMSSTSQDKNSNIWY---RATNHITNDLANLNYSTNYNEVEQV 144
           MPRFN Q+QF NN HQAY    +Q  +SN WY    ATNHITNDL NLNYSTNY+ VEQV
Sbjct: 1   MPRFNNQNQFRNNHHQAY----TQHNSSNGWYPDTSATNHITNDLTNLNYSTNYSGVEQV 60

Query: 145 HVGNGTSLKILNSGHSFFIPSDILISPNNHCPILSIPNLLHVPHIKKNLLSETEKF 198
           HV +GT LKILN GHSF IP DI IS +NHCPILS+PN+LHVPHIKKNLLS T KF
Sbjct: 61  HVRDGTGLKILNPGHSFLIPFDISISSDNHCPILSMPNVLHVPHIKKNLLSVTGKF 112

BLAST of CSPI02G09450 vs. NCBI nr
Match: KAA0026150.1 (uncharacterized protein E6C27_scaffold19G001020 [Cucumis melo var. makuwa] >TYK11610.1 uncharacterized protein E5676_scaffold263G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-23
Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 0

Query: 71  PNFQKQFTSNTPPGMPRFNKQDQFGNNPHQAYMSSTSQDKNSNIWY---RATNHITNDLA 130
           PNFQKQFTSNTPPGMP+FN Q+QF NNP+QAYM+STSQD N   WY    ATNHITNDLA
Sbjct: 138 PNFQKQFTSNTPPGMPKFNNQNQFRNNPYQAYMTSTSQDNNG--WYLDIGATNHITNDLA 197

Query: 131 NLNYSTNYNEVEQVHVGNGT 148
           NLNY T+Y+ VEQVH+G+GT
Sbjct: 198 NLNYRTDYSGVEQVHIGDGT 215

BLAST of CSPI02G09450 vs. NCBI nr
Match: KAE8651681.1 (hypothetical protein Csa_021152 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-22
Identity = 68/109 (62.39%), Postives = 76/109 (69.72%), Query Frame = 0

Query: 74  QKQFTSNTPPGMPRFNKQDQFGNNPHQAYMSSTSQDKNSNIWY---RATNHITNDLANLN 133
           +KQFT NTP GMP          +P QAYM+S+SQD N N WY    AT HITNDLAN N
Sbjct: 59  EKQFTGNTPLGMP----------SPDQAYMASSSQDNNINGWYGKTGATTHITNDLANFN 118

Query: 134 YSTNYNEVEQVHVGNGTSLKILNSGHSFFIPSDILISPNNHCPILSIPN 180
           +ST Y+     HVG+ TSLKILNSGHSFFI  DI IS +NHCPILSIPN
Sbjct: 119 FSTIYS----AHVGDRTSLKILNSGHSFFISFDISISFDNHCPILSIPN 153

BLAST of CSPI02G09450 vs. NCBI nr
Match: RVW60229.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 103.6 bits (257), Expect = 3.1e-18
Identity = 82/231 (35.50%), Postives = 117/231 (50.65%), Query Frame = 0

Query: 103 MSSTSQDKNSNIWY---RATNHITNDLANLNYSTNYNEVEQVHVGNGTSLKILNSGHSFF 162
           M +T +D  +  W+    ATNH+T+DL NLN    YN   ++H+GNGT LKI + G S F
Sbjct: 482 MVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGNSKIHMGNGTGLKISHIGLSVF 541

Query: 163 IPSDILISPNNHCPILSIPNLLHVPHIKKNLLSETE------------------------ 222
             S    SPN    +L + N+L VP IKKNLLS ++                        
Sbjct: 542 PSSS---SPNK---VLFLKNILRVPAIKKNLLSVSQFARDNNVYFEFHPKVCFVKDKSNH 601

Query: 223 KFLLQGQLHEGLYHFSLVK---AHPNSESVTSHQSQLEKPHALVVSTNH--FP--INSST 282
             LLQG LH+GLY F+L K      +  S+++ +++L   +A +V  ++  FP   NSS 
Sbjct: 602 SLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNELTCCNASLVHNDNSDFPEKTNSSF 661

Query: 283 QT--LWHNRLGHPSTTVVNESLIYGDHHIPFQEMGFAIISPLLTCSPATLG 298
               LWH RLGHP++ +V +  +  D+ IPF     + I     CS   LG
Sbjct: 662 HVFDLWHKRLGHPASKIVTQ--VLNDNKIPFSTKSGSSI-----CSACQLG 699

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9ZT941.5e-0725.42Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW24.8e-0626.37Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A5D3CWR98.8e-3571.55Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3CJL79.1e-2475.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A438FJP61.5e-1835.50Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A438EA491.5e-1835.50Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A5A7SX685.7e-1846.26Calcium-transporting ATPase 9, plasma membrane-type OS=Cucumis melo var. makuwa ... [more]
Match NameE-valueIdentityDescription
KAE8651778.11.3e-14189.42hypothetical protein Csa_006130, partial [Cucumis sativus][more]
KAA0062985.11.8e-3471.55Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0026150.11.9e-2375.00uncharacterized protein E6C27_scaffold19G001020 [Cucumis melo var. makuwa] >TYK1... [more]
KAE8651681.11.2e-2262.39hypothetical protein Csa_021152 [Cucumis sativus][more]
RVW60229.13.1e-1835.50Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G09450.1CSPI02G09450.1mRNA