CSPI02G09450 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGATAAGAAACAATGACAAAGCCAAGAGCAAAGAAATCAAGGGCAAAGTCAATGGAACCAGTGGCAAAATAGCAACAGAAGAGGACAAAATAATAATGATGGTGGAAATTGAGGAAGAGGAAGAAAATCTTGGAACAACTCAAACCACAATGCTAAATTTGTGGAAAATTTGGCCACACAACCATGAGATGCTATTTTTTATATGCCCGAACTTTCAAAAACAGTTCACTAGTAATACTCCACCTGGAATGCCAAGGTTCAATAAGCAGGATCAGTTCGGAAATAATCCCCATCAAGCTTATATGAGTTCAACTTCACAAGACAAGAATAGTAATATATGGTATCGTGCAACTAATCACATCACAAATGATCTTGCTAACCTCAATTACAGCACAAACTACAACGAAGTAGAACAAGTTCATGTTGGTAATGGAACAAGTTTAAAAATTCTAAACTCTGGTCATTCTTTCTTTATTCCTTCGGATATTTTAATTTCTCCTAATAATCATTGTCCTATTCTCTCCATACCAAATCTTCTTCATGTTCCCCACATAAAGAAAAATCTCCTAAGTGTAAGTCAATTTACAAAAGATAATAATTGTTTCTTTGAATTCCATCCAACAATTTGTTTTGTTAAGTGTCAGGAAACTGAAAAATTTTTACTCCAAGGACAACTTCATGAAGGACTATATCATTTCTCACTAGTGAAAGCTCATCCCAATTCAGAGTCAGTCACCTCTCATCAATCTCAACTTGAGAAACCACATGCTCTAGTAGTCTCCACAAATCATTTTCCTATCAATTCAAGCACTCAAACTCTTTGGCACAATAGATTAGGCCATCCATCTACTACCGTTGTAAACGAAGTACTAAACAAATGTAATATTTCCTTACCAAATCCAAATAAAATAGCTATAACTTGTCATTCATGTGCTCTTGGAAAAAGTCACAAACTACCCTTTTCCAAATCAAAAACAAATTAATCTGCACCTCTTGAGCTTGTAGAGTCTGATTTATGGGGACCATCACATACCATTTCAAGAAATGGGTTTCGCTATTATATCACCTTTGTTGACATGTTCTCCCGCCACACTTGGATATATTTTCTCCAATCCAAGTCTGAAGCCTTAA ATGTTGATAAGAAACAATGACAAAGCCAAGAGCAAAGAAATCAAGGGCAAAGTCAATGGAACCAGTGGCAAAATAGCAACAGAAGAGGACAAAATAATAATGATGGTGGAAATTGAGGAAGAGGAAGAAAATCTTGGAACAACTCAAACCACAATGCTAAATTTGTGGAAAATTTGGCCACACAACCATGAGATGCTATTTTTTATATGCCCGAACTTTCAAAAACAGTTCACTAGTAATACTCCACCTGGAATGCCAAGGTTCAATAAGCAGGATCAGTTCGGAAATAATCCCCATCAAGCTTATATGAGTTCAACTTCACAAGACAAGAATAGTAATATATGGTATCGTGCAACTAATCACATCACAAATGATCTTGCTAACCTCAATTACAGCACAAACTACAACGAAGTAGAACAAGTTCATGTTGGTAATGGAACAAGTTTAAAAATTCTAAACTCTGGTCATTCTTTCTTTATTCCTTCGGATATTTTAATTTCTCCTAATAATCATTGTCCTATTCTCTCCATACCAAATCTTCTTCATGTTCCCCACATAAAGAAAAATCTCCTAAGTGAAACTGAAAAATTTTTACTCCAAGGACAACTTCATGAAGGACTATATCATTTCTCACTAGTGAAAGCTCATCCCAATTCAGAGTCAGTCACCTCTCATCAATCTCAACTTGAGAAACCACATGCTCTAGTAGTCTCCACAAATCATTTTCCTATCAATTCAAGCACTCAAACTCTTTGGCACAATAGATTAGGCCATCCATCTACTACCGTTGTAAACGAAAGTCTGATTTATGGGGACCATCACATACCATTTCAAGAAATGGGTTTCGCTATTATATCACCTTTGTTGACATGTTCTCCCGCCACACTTGGATATATTTTCTCCAATCCAAGTCTGAAGCCTTAA ATGTTGATAAGAAACAATGACAAAGCCAAGAGCAAAGAAATCAAGGGCAAAGTCAATGGAACCAGTGGCAAAATAGCAACAGAAGAGGACAAAATAATAATGATGGTGGAAATTGAGGAAGAGGAAGAAAATCTTGGAACAACTCAAACCACAATGCTAAATTTGTGGAAAATTTGGCCACACAACCATGAGATGCTATTTTTTATATGCCCGAACTTTCAAAAACAGTTCACTAGTAATACTCCACCTGGAATGCCAAGGTTCAATAAGCAGGATCAGTTCGGAAATAATCCCCATCAAGCTTATATGAGTTCAACTTCACAAGACAAGAATAGTAATATATGGTATCGTGCAACTAATCACATCACAAATGATCTTGCTAACCTCAATTACAGCACAAACTACAACGAAGTAGAACAAGTTCATGTTGGTAATGGAACAAGTTTAAAAATTCTAAACTCTGGTCATTCTTTCTTTATTCCTTCGGATATTTTAATTTCTCCTAATAATCATTGTCCTATTCTCTCCATACCAAATCTTCTTCATGTTCCCCACATAAAGAAAAATCTCCTAAGTGAAACTGAAAAATTTTTACTCCAAGGACAACTTCATGAAGGACTATATCATTTCTCACTAGTGAAAGCTCATCCCAATTCAGAGTCAGTCACCTCTCATCAATCTCAACTTGAGAAACCACATGCTCTAGTAGTCTCCACAAATCATTTTCCTATCAATTCAAGCACTCAAACTCTTTGGCACAATAGATTAGGCCATCCATCTACTACCGTTGTAAACGAAAGTCTGATTTATGGGGACCATCACATACCATTTCAAGAAATGGGTTTCGCTATTATATCACCTTTGTTGACATGTTCTCCCGCCACACTTGGATATATTTTCTCCAATCCAAGTCTGAAGCCTTAA MLIRNNDKAKSKEIKGKVNGTSGKIATEEDKIIMMVEIEEEEENLGTTQTTMLNLWKIWPHNHEMLFFICPNFQKQFTSNTPPGMPRFNKQDQFGNNPHQAYMSSTSQDKNSNIWYRATNHITNDLANLNYSTNYNEVEQVHVGNGTSLKILNSGHSFFIPSDILISPNNHCPILSIPNLLHVPHIKKNLLSETEKFLLQGQLHEGLYHFSLVKAHPNSESVTSHQSQLEKPHALVVSTNHFPINSSTQTLWHNRLGHPSTTVVNESLIYGDHHIPFQEMGFAIISPLLTCSPATLGYIFSNPSLKP* Homology
BLAST of CSPI02G09450 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.5e-07 Identity = 61/240 (25.42%), Postives = 105/240 (43.75%), Query Frame = 0
BLAST of CSPI02G09450 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.8e-06 Identity = 48/182 (26.37%), Postives = 79/182 (43.41%), Query Frame = 0
BLAST of CSPI02G09450 vs. ExPASy TrEMBL
Match: A0A5D3CWR9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001470 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 8.8e-35 Identity = 83/116 (71.55%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of CSPI02G09450 vs. ExPASy TrEMBL
Match: A0A5D3CJL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00550 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 9.1e-24 Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 0
BLAST of CSPI02G09450 vs. ExPASy TrEMBL
Match: A0A438FJP6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1134 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.5e-18 Identity = 82/231 (35.50%), Postives = 117/231 (50.65%), Query Frame = 0
BLAST of CSPI02G09450 vs. ExPASy TrEMBL
Match: A0A438EA49 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2917 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.5e-18 Identity = 82/231 (35.50%), Postives = 117/231 (50.65%), Query Frame = 0
BLAST of CSPI02G09450 vs. ExPASy TrEMBL
Match: A0A5A7SX68 (Calcium-transporting ATPase 9, plasma membrane-type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00470 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 5.7e-18 Identity = 68/147 (46.26%), Postives = 87/147 (59.18%), Query Frame = 0
BLAST of CSPI02G09450 vs. NCBI nr
Match: KAE8651778.1 (hypothetical protein Csa_006130, partial [Cucumis sativus]) HSP 1 Score: 513.5 bits (1321), Expect = 1.3e-141 Identity = 262/293 (89.42%), Postives = 262/293 (89.42%), Query Frame = 0
BLAST of CSPI02G09450 vs. NCBI nr
Match: KAA0062985.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK16361.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 157.5 bits (397), Expect = 1.8e-34 Identity = 83/116 (71.55%), Postives = 91/116 (78.45%), Query Frame = 0
BLAST of CSPI02G09450 vs. NCBI nr
Match: KAA0026150.1 (uncharacterized protein E6C27_scaffold19G001020 [Cucumis melo var. makuwa] >TYK11610.1 uncharacterized protein E5676_scaffold263G00550 [Cucumis melo var. makuwa]) HSP 1 Score: 120.9 bits (302), Expect = 1.9e-23 Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 0
BLAST of CSPI02G09450 vs. NCBI nr
Match: KAE8651681.1 (hypothetical protein Csa_021152 [Cucumis sativus]) HSP 1 Score: 118.2 bits (295), Expect = 1.2e-22 Identity = 68/109 (62.39%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of CSPI02G09450 vs. NCBI nr
Match: RVW60229.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]) HSP 1 Score: 103.6 bits (257), Expect = 3.1e-18 Identity = 82/231 (35.50%), Postives = 117/231 (50.65%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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