CSPI02G08120 (gene) Cucumber (PI 183967) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGCATTAACCTTATGGCCCATTAGTTCGATCTGCTGAATCCGAAACCCTAAAAAAAAAAGAAAAAAAGAAAAAAAAAATCGCCATTCGCCCATCGTTCTTCCGAAGCCCTAAAAAAGACTTCCTCCTTCTTCATTTGTTTCTCTCATATCCTCACGTCCCAACGCCGTTCGTATCACACTTCTTCTCTCACCACCCCTAAAAATGGTACTTACTCTCTACACTTTGTTTATCGCGATTCTCTACCCTGTATTTTAATGGCGCCTCTTATTACTCTTGAAATTTCTGTTCAATCTACGTACCCAACTGCTATGTTATTGTTGTTTTATTACTCATGAGCAGCAGCTCATGGCCTAGTTTTTGTTGTATCCAATCAATGATTTGTTTCTGTTCAACTCTCATGCTAGAGATCTTTAACCATTCGACGATCTCTCGAGCTTGTTTAGAGTACTTTTCGAATGTTAAACTTCTCCAACTGTTGTAGTGAATTTTTGTTGGATTTTCGTCTTCAACTTTTTAAATAACTTAACTAAGAATTTGGTGCTGGCAAGAATTTGGATGAAGTTATAATGGGGTGATTGATGGGTCCGTATTATGGTTCTTCGATTGTAAAAGGGGGTTTCTTTTTTCTGGAATAAAGAGCGTCATCTTGAAGTGTTCTTCGACATCGTTAATTATCAATCCATTTGCTGTTGCACATTACCTAATCGATTTGTTTTTTTTACGTTTCTTTTTGGACGAATTGGATAAGCCTTTTGTAATCCATTAGAATTCTCCATTCATGTACTGATTTTATTTTTGTTTCAAGTAATTCTATTCCATGTTATCTCTTGTTTATTTGTTTGTTTGATAATGTTGTGGGAGCATTCTGTCCATTGTCCTGAAACATTATTTTTCTAGCGTTTATTGATTGTAATGCATTGAATACCTGAACATAGTTGGGGTTTTATATTATGGGTTTCACGATCAAGTTTGTTGACCTTCCCACTTAGTTCACGTTGTTTCGAGCATTCCTATTAGAGCATGGGAGGTATAAATTTATCAAGCGGCATTGTTTCTGCCTTTGATATTGCCATGAATTTGTATACTTCTCTTGAAAGTGTTGATGGAATTGCATAGAAGTTTCAAAACACTAATGCTGAATCTACCTTTTGTTTCTCTTGTTGGACAGCCAAAGCAAATCCATGAGATCAAAGACTTTCTTCTCACTGCAAGAAGAAAGGATGCCCGCTCGGTCAAAATCAAGAGGAGCAAAGATGTAGTCAAGTTTAAGGTTCGCTGCTCCAAGTACCTTTACACGCTCTGCGTCTTTGACTCGGAGAAGGCTGACAAATTGAAGCAGTCTCTTCCCCCAGGTATTCTTTTAAGCTTTGTTTAATTTATTCTTATAAAAAAAAGCTCTGTTAAATTTATGTTCAGGATTTGGCCTTGATTGGTTTCAAGAATCCATGTGTTTGTTATTTTTATCATGAATTTAAATTTATACGTTTTCTTGTTTAACTACACACATGTTAAAGCGTTTTAATTCCTACATATTTTTGGTTTAAATTGTTGTAGGTTTGAGTGTGCAAGATCTTTGAAGAAGTAGTGAGCTAATTTTGGAGATTTATATGGAAAAACAAGGGCTGAAGGAAACATTTGCCAGTTATTTTTCTTTCTTATTTTCAATCATCTGCTGTGTTGAATGTTCGGATTTTTATAGGGACGGCTGTTCTTGTCACGAGTAGGAGTTGGACTGAACTTTTATAGTGTTTCTTAAATTTTATGAACCGTTCTCAGATTTTGAACTGTGAGAGATTTGTCCATCATTTAATCACAACTTCTATCATCATTTTGGCCCTTTTGTTCTATATTTTAGTTTTTCTCATCAGAAATCATTTTACTCATCAGAAATTGTCAGCCAGCATATGAATTCTCCATTGGATTTTTCTGGGTAGGTGGATGATAGAGTTAAAGGAATACTCTTCTTGTTCTAAACTTTCTGGGTCTTAAAAGATTTGGAGAAAACGTTTTTGTTTTCCTAGAACTTCTGATAATTATTCAGC AAGCATTAACCTTATGGCCCATTAGTTCGATCTGCTGAATCCGAAACCCTAAAAAAAAAAGAAAAAAAGAAAAAAAAAATCGCCATTCGCCCATCGTTCTTCCGAAGCCCTAAAAAAGACTTCCTCCTTCTTCATTTGTTTCTCTCATATCCTCACGTCCCAACGCCGTTCGTATCACACTTCTTCTCTCACCACCCCTAAAAATGCCAAAGCAAATCCATGAGATCAAAGACTTTCTTCTCACTGCAAGAAGAAAGGATGCCCGCTCGGTCAAAATCAAGAGGAGCAAAGATGTAGTCAAGTTTAAGGTTCGCTGCTCCAAGTACCTTTACACGCTCTGCGTCTTTGACTCGGAGAAGGCTGACAAATTGAAGCAGTCTCTTCCCCCAGGTTTGAGTGTGCAAGATCTTTGAAGAAGTAGTGAGCTAATTTTGGAGATTTATATGGAAAAACAAGGGCTGAAGGAAACATTTGCCAGTTATTTTTCTTTCTTATTTTCAATCATCTGCTGTGTTGAATGTTCGGATTTTTATAGGGACGGCTGTTCTTGTCACGAGTAGGAGTTGGACTGAACTTTTATAGTGTTTCTTAAATTTTATGAACCGTTCTCAGATTTTGAACTGTGAGAGATTTGTCCATCATTTAATCACAACTTCTATCATCATTTTGGCCCTTTTGTTCTATATTTTAGTTTTTCTCATCAGAAATCATTTTACTCATCAGAAATTGTCAGCCAGCATATGAATTCTCCATTGGATTTTTCTGGGTAGGTGGATGATAGAGTTAAAGGAATACTCTTCTTGTTCTAAACTTTCTGGGTCTTAAAAGATTTGGAGAAAACGTTTTTGTTTTCCTAGAACTTCTGATAATTATTCAGC ATGCCAAAGCAAATCCATGAGATCAAAGACTTTCTTCTCACTGCAAGAAGAAAGGATGCCCGCTCGGTCAAAATCAAGAGGAGCAAAGATGTAGTCAAGTTTAAGGTTCGCTGCTCCAAGTACCTTTACACGCTCTGCGTCTTTGACTCGGAGAAGGCTGACAAATTGAAGCAGTCTCTTCCCCCAGGTTTGAGTGTGCAAGATCTTTGA MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDL* Homology
BLAST of CSPI02G08120 vs. ExPASy Swiss-Prot
Match: O22860 (60S ribosomal protein L38 OS=Arabidopsis thaliana OX=3702 GN=RPL38A PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 2.2e-31 Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 0
BLAST of CSPI02G08120 vs. ExPASy Swiss-Prot
Match: P46291 (60S ribosomal protein L38 OS=Solanum lycopersicum OX=4081 GN=RPL38 PE=3 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 2.7e-29 Identity = 63/69 (91.30%), Postives = 67/69 (97.10%), Query Frame = 0
BLAST of CSPI02G08120 vs. ExPASy Swiss-Prot
Match: Q95V84 (60S ribosomal protein L38 OS=Branchiostoma belcheri OX=7741 GN=RPL38 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 3.6e-26 Identity = 57/69 (82.61%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of CSPI02G08120 vs. ExPASy Swiss-Prot
Match: Q9JJI8 (60S ribosomal protein L38 OS=Mus musculus OX=10090 GN=Rpl38 PE=1 SV=3) HSP 1 Score: 112.5 bits (280), Expect = 2.0e-24 Identity = 54/69 (78.26%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of CSPI02G08120 vs. ExPASy Swiss-Prot
Match: Q32PB9 (60S ribosomal protein L38 OS=Bos taurus OX=9913 GN=RPL38 PE=3 SV=4) HSP 1 Score: 110.9 bits (276), Expect = 5.8e-24 Identity = 53/69 (76.81%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of CSPI02G08120 vs. ExPASy TrEMBL
Match: A0A6J1I9U6 (60S ribosomal protein L38 OS=Cucurbita maxima OX=3661 GN=LOC111471374 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 9.6e-30 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of CSPI02G08120 vs. ExPASy TrEMBL
Match: A0A1S3CB44 (60S ribosomal protein L38 OS=Cucumis melo OX=3656 GN=LOC103498968 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 9.6e-30 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of CSPI02G08120 vs. ExPASy TrEMBL
Match: A0A5J5AU72 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_031170 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 9.6e-30 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of CSPI02G08120 vs. ExPASy TrEMBL
Match: A0A6J1CW23 (60S ribosomal protein L38 OS=Momordica charantia OX=3673 GN=LOC111014746 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 9.6e-30 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of CSPI02G08120 vs. ExPASy TrEMBL
Match: A0A6P6UE62 (60S ribosomal protein L38 OS=Coffea arabica OX=13443 GN=LOC113710358 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 9.6e-30 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of CSPI02G08120 vs. NCBI nr
Match: XP_038906668.1 (60S ribosomal protein L38-like [Benincasa hispida]) HSP 1 Score: 138.7 bits (348), Expect = 2.0e-29 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of CSPI02G08120 vs. NCBI nr
Match: QCG74680.1 (60S ribosomal protein L38-like protein, partial [Coffea canephora]) HSP 1 Score: 138.7 bits (348), Expect = 2.0e-29 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of CSPI02G08120 vs. NCBI nr
Match: CDP04642.1 (unnamed protein product [Coffea canephora]) HSP 1 Score: 138.7 bits (348), Expect = 2.0e-29 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of CSPI02G08120 vs. NCBI nr
Match: CDP18171.1 (unnamed protein product [Coffea canephora]) HSP 1 Score: 138.7 bits (348), Expect = 2.0e-29 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of CSPI02G08120 vs. NCBI nr
Match: XP_002514807.2 (60S ribosomal protein L38 [Ricinus communis] >XP_003631881.1 PREDICTED: 60S ribosomal protein L38 [Vitis vinifera] >XP_004145035.1 60S ribosomal protein L38 [Cucumis sativus] >XP_008441729.1 PREDICTED: 60S ribosomal protein L38 [Cucumis melo] >XP_008460031.1 PREDICTED: 60S ribosomal protein L38 [Cucumis melo] >XP_008460032.1 PREDICTED: 60S ribosomal protein L38 [Cucumis melo] >XP_010242739.1 PREDICTED: 60S ribosomal protein L38 [Nelumbo nucifera] >XP_010258506.1 PREDICTED: 60S ribosomal protein L38 [Nelumbo nucifera] >XP_010672261.1 PREDICTED: 60S ribosomal protein L38 [Beta vulgaris subsp. vulgaris] >XP_010673886.1 PREDICTED: 60S ribosomal protein L38 [Beta vulgaris subsp. vulgaris] >XP_011620720.1 60S ribosomal protein L38 [Amborella trichopoda] >XP_011649040.2 60S ribosomal protein L38 [Cucumis sativus] >XP_011656729.1 60S ribosomal protein L38 [Cucumis sativus] >XP_015583639.1 60S ribosomal protein L38 [Ricinus communis] >XP_021647103.1 60S ribosomal protein L38 [Hevea brasiliensis] >XP_021680970.1 60S ribosomal protein L38 [Hevea brasiliensis] >XP_021734344.1 60S ribosomal protein L38 [Chenopodium quinoa] >XP_021772297.1 60S ribosomal protein L38 [Chenopodium quinoa] >XP_021896712.1 60S ribosomal protein L38 [Carica papaya] >XP_021906662.1 60S ribosomal protein L38 [Carica papaya] >XP_022145242.1 60S ribosomal protein L38 [Momordica charantia] >XP_022145247.1 60S ribosomal protein L38 [Momordica charantia] >XP_022946385.1 60S ribosomal protein L38 isoform X2 [Cucurbita moschata] >XP_022946386.1 60S ribosomal protein L38 [Cucurbita moschata] >XP_022949560.1 60S ribosomal protein L38 [Cucurbita moschata] >XP_022959603.1 60S ribosomal protein L38 [Cucurbita moschata] >XP_022972864.1 60S ribosomal protein L38 isoform X2 [Cucurbita maxima] >XP_022972865.1 60S ribosomal protein L38 [Cucurbita maxima] >XP_022997957.1 60S ribosomal protein L38 [Cucurbita maxima] >XP_023004176.1 60S ribosomal protein L38 [Cucurbita maxima] >XP_023513714.1 60S ribosomal protein L38 [Cucurbita pepo subsp. pepo] >XP_023524963.1 60S ribosomal protein L38 [Cucurbita pepo subsp. pepo] >XP_023545548.1 60S ribosomal protein L38 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023545639.1 60S ribosomal protein L38 isoform X2 [Cucurbita pepo subsp. pepo] >XP_024024522.1 60S ribosomal protein L38 [Morus notabilis] >XP_024031738.1 60S ribosomal protein L38 [Morus notabilis] >XP_027075173.1 60S ribosomal protein L38 [Coffea arabica] >XP_027078788.1 60S ribosomal protein L38 [Coffea arabica] >XP_027085758.1 60S ribosomal protein L38 [Coffea arabica] >XP_027087203.1 60S ribosomal protein L38 [Coffea arabica] >XP_027089115.1 60S ribosomal protein L38 [Coffea arabica] >XP_027178642.1 60S ribosomal protein L38 [Coffea eugenioides] >XP_027184555.1 60S ribosomal protein L38 [Coffea eugenioides] >XP_030470372.1 60S ribosomal protein L38 [Syzygium oleosum] >XP_030472277.1 60S ribosomal protein L38 [Syzygium oleosum] >XP_030481021.1 60S ribosomal protein L38 [Cannabis sativa] >XP_030519369.1 60S ribosomal protein L38 [Rhodamnia argentea] >XP_030528203.1 60S ribosomal protein L38 [Rhodamnia argentea] >XP_030540781.1 60S ribosomal protein L38 [Rhodamnia argentea] >XP_030937456.1 60S ribosomal protein L38 [Quercus lobata] >XP_031273565.1 60S ribosomal protein L38 [Pistacia vera] >XP_031406357.1 60S ribosomal protein L38 [Punica granatum] >XP_031478698.1 60S ribosomal protein L38 [Nymphaea colorata] >XP_031489510.1 60S ribosomal protein L38 [Nymphaea colorata] >XP_038889432.1 60S ribosomal protein L38 [Benincasa hispida] >XP_038906588.1 60S ribosomal protein L38 isoform X2 [Benincasa hispida] >XP_039163455.1 60S ribosomal protein L38 [Eucalyptus grandis] >XP_039167128.1 60S ribosomal protein L38 [Eucalyptus grandis] >KAA8527272.1 hypothetical protein F0562_034631 [Nyssa sinensis] >KAF3972214.1 hypothetical protein CMV_004269 [Castanea mollissima] >KAF8038440.1 hypothetical protein BT93_B1090 [Corymbia citriodora subsp. variegata] >KAG6592978.1 60S ribosomal protein L38, partial [Cucurbita argyrosperma subsp. sororia] >OAY32247.1 hypothetical protein MANES_13G002900v8 [Manihot esculenta] >PON32581.1 Ribosomal protein [Parasponia andersonii] >PON93714.1 Ribosomal protein [Trema orientale]) HSP 1 Score: 138.7 bits (348), Expect = 2.0e-29 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of CSPI02G08120 vs. TAIR 10
Match: AT2G43460.1 (Ribosomal L38e protein family ) HSP 1 Score: 135.6 bits (340), Expect = 1.6e-32 Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 0
BLAST of CSPI02G08120 vs. TAIR 10
Match: AT3G59540.1 (Ribosomal L38e protein family ) HSP 1 Score: 135.6 bits (340), Expect = 1.6e-32 Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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