CSPI02G07640 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G07640
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 6622128 .. 6622397 (+)
RNA-Seq ExpressionCSPI02G07640
SyntenyCSPI02G07640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAATTGATTCATCCCCTTCAAGGCAAGAACCTAAAAACTTCCTTGCCTTGGTACAATTTGACCCAATTAGCCAAACTGAATTGCCTGGTCAAGAAGATTCAATTCAGAAGGAATTTCAAGACCCTCTAATTGATCTTAACGCGTCCAGTGATGATGCATTCATCAAGCAAAAAAATGGGGCAGATGGCCCAAACCTATTCTCAGAAAGGAATAAAGTTCCTGAGGAGGTAATTAATGATCCACACTTCACAGGGAGAAAGAAATAA

mRNA sequence

ATGCAAATTGATTCATCCCCTTCAAGGCAAGAACCTAAAAACTTCCTTGCCTTGGTACAATTTGACCCAATTAGCCAAACTGAATTGCCTGGTCAAGAAGATTCAATTCAGAAGGAATTTCAAGACCCTCTAATTGATCTTAACGCGTCCAGTGATGATGCATTCATCAAGCAAAAAAATGGGGCAGATGGCCCAAACCTATTCTCAGAAAGGAATAAAGTTCCTGAGGAGGTAATTAATGATCCACACTTCACAGGGAGAAAGAAATAA

Coding sequence (CDS)

ATGCAAATTGATTCATCCCCTTCAAGGCAAGAACCTAAAAACTTCCTTGCCTTGGTACAATTTGACCCAATTAGCCAAACTGAATTGCCTGGTCAAGAAGATTCAATTCAGAAGGAATTTCAAGACCCTCTAATTGATCTTAACGCGTCCAGTGATGATGCATTCATCAAGCAAAAAAATGGGGCAGATGGCCCAAACCTATTCTCAGAAAGGAATAAAGTTCCTGAGGAGGTAATTAATGATCCACACTTCACAGGGAGAAAGAAATAA

Protein sequence

MQIDSSPSRQEPKNFLALVQFDPISQTELPGQEDSIQKEFQDPLIDLNASSDDAFIKQKNGADGPNLFSERNKVPEEVINDPHFTGRKK*
Homology
[Close]
BLAST of CSPI02G07640 vs. ExPASy TrEMBL
Match: A0A0A0LHN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G079110 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 9.1e-41
Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 0 

Query: 1  MQIDSSPSRQEPKNFLALVQFDPISQTELPGQEDSIQKEFQDPLIDLNASSDDAFIKQKN 60
          MQIDSSPSRQEPKNFLALVQFDPISQTELPGQEDSIQKEFQDPLIDLNASSDDAFIKQKN
Sbjct: 1  MQIDSSPSRQEPKNFLALVQFDPISQTELPGQEDSIQKEFQDPLIDLNASSDDAFIKQKN 60

Query: 61 GADGPNLFSERNKVPEEVINDPHFTGRKK 90
          GADGPNLFSERNKVPEEVINDP+FT RKK
Sbjct: 61 GADGPNLFSERNKVPEEVINDPYFTWRKK 89

[Close]
BLAST of CSPI02G07640 vs. NCBI nr
Match: KAE8651723.1 (hypothetical protein Csa_006188 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 1.5e-34
Identity = 80/92 (86.96%), Postives = 82/92 (89.13%), Query Frame = 0 

Query: 1  MQIDSSPSRQEPKNFLALVQFDPISQTELPGQEDSIQKEFQDPLIDLNASSDDAFIKQKN 60
          MQIDSSPSRQEPKNFLALVQFDPISQTELPGQEDSIQKEFQDPLIDLNASSDDAFIKQKN
Sbjct: 1  MQIDSSPSRQEPKNFLALVQFDPISQTELPGQEDSIQKEFQDPLIDLNASSDDAFIKQKN 60

Query: 61 GADGPNLFSERNKVPEEV---INDPHFTGRKK 90
          GADGPNLFSERNKVPEE    I + H    K+
Sbjct: 61 GADGPNLFSERNKVPEECQRNIQEMHLRSEKQ 92

The following BLAST results are available for this feature:
BLAST of CSPI02G07640 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G07640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHN29.1e-4197.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G079110 PE=4 SV=1[more]
BLAST of CSPI02G07640 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8651723.11.5e-3486.96hypothetical protein Csa_006188 [Cucumis sativus][more]
BLAST of CSPI02G07640 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G07640.1CSPI02G07640.1mRNA