CSPI02G07450 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G07450
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	splicing factor 3B subunit 2
Location	Chr2: 6364786 .. 6372355 (+)
RNA-Seq Expression	CSPI02G07450
Synteny	CSPI02G07450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTAATTGAGCTGAGTGTATGTTAGCAATTGAATCTCCAACTTTGATAGAACATCTGCATGACTTAAGAGAAAGAGAAGGTGTTCTATTTTCGAAGGGTGAAAACGATTAATTTGGACAATTTACCGAAACAATCCTTAGGGCCTTCGGACTCTTCCTTTTCATCCCTTTCTCTTTCTCTTAGTTTCCCCCTCTCTCCCATCGACCTCCACCCAGGTTTCTTTCTTCTCCACCATCCCTTGTAGCGCCACACATCGCCACTTCGGCCTCACTCCTAACTTTCATTCATTCATTTCTTTATCCCTCAACCTCCACCATTTCTATTTGCGGTCGTCGGCGCATCTTTCCATCCATTTTCTTTTCTGCAACCTCACGTCGCAAGCTACCCTTTCCACAAATTCTCTCCCAATATATTTCTATGATTTTCCGCTCCTAACTTCTCCTTGTCTCTCGTTTTCTGCCCTCTCCGGAGAACCGACTAATAACCTGCTTATCTTCTTACCCTTGTTATCCTCCACCGCCGTGGCCTTGCAGGAAACAGGTTCGTATTCTTCTTTACCCTATGGTTTTTTTTTGGGGTTATTTTTCTGCCTCTTACTCGGTTTTGTTTCTTTTTCTGTTCATCATCTGCTGATTTCCGTACATTTCCATTTTGATTTGTTATGTTTCGTTCTTCTCTCAATTCTCACAGCTGCGTGCGGGTTTGTTTATTGGTCGATTTGTGTGAAGACTGAATCCGAGCATGACTGTGGAGGTTTCTCAGCCAAATGGAGTTGTCTCGAATGGCGACTTGGACCTCAATTCTAACCCTAAATCTGGCGCCGTCAAGAAGTCACGAGAAAATGAACGACGTCGTCGTCGACGAAAGCAGAAGAAAAACCAGAAGGCTTCTAAGGTGAAGGAGGCTGCTGGTGGAGAAGACAGTGACGCTTCCGGCGATGACACGAAGGAGAATGATGATCCACTGCAGGTGTGTTTTCTTACGTTTTTTTTTTTTTTTTTAATTTTATGCTAAGGAAATGTTTGTCGGCTTGTGGTTTTAGGGTTATGTTCTCTAAGTGTTTCGAGTTTTCTTGGCAAATACTGGTTTTTGGAATGAAGGTTGAACTAGATAGGTAGAATTGCGATTGTTGAGGAAGGAGAGTGGATATCTAAGAGACTAGGACGTCTATCATTCTTTTTACCATAAGAAGTAGATTTAAGTTGAGATTTAGATGATGCTGTACGTGAGTTTAGAAAGTGAGTACGTAGCACCGAGCCCTACCTGTACCAGATAAAGCTACGCTCATTTGTTTAAGTTTCCATTATCTTTTGAAAGTTCGTAGAGAATAATACATTGAGAAACAAATCTGTTTGTAATTCCAGTATTTTTCTTGCTTTATAGTCCATAGGTGTCATGATACGAATCATGTTATGGCTATGATTCATTAGAGTCTTTTCTTATTCTTAACCTTTCCATTTAGCTGAAGTTTAGTCTCTTTGTTGAAGGACAAGGTGCTGCTAATTTATCTCTGATAGTTCTGCCTGGAATTTGGTTAATAAGGTTAGTAGGACTTAGGGTTTTGTAACTTTAGCTAGCTAATGATGATTAACGTCTTCAATTGTAATATTCCTTTAGCCTTGCGGAGGGTTTATAGACCTTGACCCCTACATTGTTCGTTTTCCTTCTTTTGAGAAATGTACATGTTCCTATTGTTTCTTATTTAAACAAGGAACTTAGAACCTTGATTGTTGGACAGCAAGAACATTCATGAGTCATTTCCCTCTTCTTTTTGCTGTGTGTGCCATATAATGAGCCATTCAAATTGCATTTATTTGTTTTTGAATTTATAGGTTGTTGAGAAAGTAGAAATTGAATATATACCTGAGAAGGCTGAACTAGATGATAGCTTGGATGAAGATTTTAGAAAAGTTTTTGAGAAATTCAGTTTCAGTGAGGTTGCTGGTGCTGAGGTAAGTTTAAACCTACTTGTGTAATTTTGCTCATCAGTTCAGTTTCTTCAGTCATGATGCAATCCGCGTAAATCTCTGCTTTTTATTTATACATAGGAGAATGAAGACAAAGATGAGTCTGCCCAAAATGCAACATCTAAGAAGTCAGACTCGGATTCTGATGATGAAGAACATGATAACCAACAAAAGGAAAAAGGCTTGTCAAACAAGAAAAAGAAGGTATAGAGCTTGCTATTATCTTACCATTTATGCATGAAGGGTGGCCTTGGTTATTTATTGTCATAATGATCTGGAAGTAATGGTTGCCACTTTCAGCTGCAACGGCGTATGAAAATTGCAGAATTGAAGCAGATTTGTTCGAGACCAGATGTTGTTGAGGTATTTATAGAGCACTTTGTACTGTATTGCACGTATCTTTTACCTTACAAAATCTTCATAAAACCTGACACCAGGGAGTGAAGTGCCAGTTTGCATTTTCTGTTTATGATATTCTTGTGTGCTTATCTATGTACCTTTCAGATCTGGGACGCAACTGCAGCTGATCCCAAGTTACTTGTTTATCTAAAATCTTATCGCAATACAGTTCCTGTGCCAAGGCATTGGTGTCAGAAAAGGAAATTTTTACAGGTCAGTAATTCTGCTGGTATTAAGTTTACGTCTGCATACATCTATGCACAATTGATGGGTATGTTCAACATGAGGAAATGAGAGAGTTGAGTGAGGGAAGATCATGTTGATAAGGTTTCTCTTATATGTACATATCTGATTCTTGCAGGGGTGTGGCTGTGACACTGTTGGAGCCGGAACTTGTAGGTGTTTGCTAAGAGCACCCATGGATTATTTCTATTTTAGTATATTTTGTGGTGTGGGCTGGGATGTGAACAATTTTATGTCGCATGGGCAAATTTGTTCTGCATGATAATTTTCGTTGTATACTACATCAATATGATAATCATTCTGTTTTAAAATCTTAGCTGCCTTTCTGTTAATAATGACACTGCCATTTTATGATTTTGTTGATGAATTAATATCTTTGTTTGATTGGATCTTAGATATGGTTGAATTTATTTGCAGGGGAAGCGTGGTATCGAGAAGCAACCATTCCAACTTCCAGATTTTATTGCAGCAACAGGAATTGAGAAAATTCGACAGGTAGCTCTTACTACAACTTTTGTTCATATTACGCTGGGGAAACCATGTTCAGTCTAAATTTATTTCAATGCACATGCTAGGCCTGGAATTGTCAATTCTTATCCAGAAAAGTAATATCCAATTCTTTATTATATTTGTTATGCAGGCGTACATAGAAAAAGAGGACAGTAAGAAATTGAAGCAAAAGCAAAGAGAACGAATGCAGCCAAAGATGGGAAAGATGGATATTGATTATCAGGTTTTTTACTACCTTTAGATTTGATATGTATTTGACTGACAATATCTAGTTTTACATCTGCTTCTAGGTGTCCTTGTTGTCAAGAATCTGAACATTCTAACTAATTAAATTGGTTATTGTGCATTAGGTTCTTCATGATGCTTTTTTCAAGTACCAAACGAAGCCAAAGCTGACAACTCTTGGAGATCTGTACTACGAAGGGAAAGAATTCGAGGTATTAGGCTATTACTATTATTTATCCACGATGTTCTTTGGTCAATGTGCATTTCAAGTTCATAAATAAGGAGGTGGTATAGAAGTAACTATTTTAACATTGTCGCTGCTTGTATACAGCTATTGAGTAGTTAATCTGTGGGAATTTAGCTTCCTTACTTGCTTGTTCATTGGCATACAGGTTAAGTTAAGGGAGATGAAACCAGGCATGCTGTCACAAGAACTGAAAGAAGCGCTCGGTATGCCAGAAGGCGCTCCTCCTCCATGGCTCATCAACATGCAGGTTGGATGACTAAACTTATTGTCAAACTGAAATCTGATCGTGTTTTCTTGAAGATGTTTGTATTTGTGATCTTTCACTTATATTTGTGTTTTTTTTTCCATAGAGATATGGTCCTCCACCATCCTATCCAGATCTCAAGATTCCAGGACTCAATGCTCCCATTCCACCTGGAGCTAGCTTTGGTTACCATCCTGGTGGCTGGGGCAAGCCTCCTGTGGATGAAGTGAGTATTTGACTTGTCATACTTTTTTCTTCATTTTAATCTGCTAAATCTTATCATTGTTCTTTCTGTTTTCATGGATAGTACGGCCGTCCACTGTATGGAGATGTGTTTGGTGTTCAGCAACAGGAGCAAGCTAACTACGAGGTATCTTATTTATTCTGTATCAACAGGTTTTTTTATTGAAATTTAGTGAAGGATGGATACATGAAAAGCAGAACTAAATATCCAACATTTAGGTTCCTTATAAGACTTGCTCAAACTCCCCCTTCGAGGACATAAAATAAAATTGGAACGATATAAAATGTGCTCAAGCTAGATCTATAGAAAAGGGGTAAAATTTGAAATATTAATGGTGAACAGCAATTTGGAGATGTGAATTTATCAAATTCAGTATTTGCTCTTAATCTCTTATGTTTGTGATTCTTCACTGCTGATTCCCTTTTTAACTCCAACATGGTTTATCTTTTAGTTTATGCCAATTTCTTTCCGTGGAGCACGCAGATTTTGAGACATTCCTTTATACTAAGCTTCTTTTAGGAAGAAATATTTGATAATAGTGCCATTCTCTTATCCACCCTTTTGTGAGGTCTGCGTATATGTCTTTATTTGATTGTCTGATGCCTCATTTAGGAGGAACCTGTTGATAAGACCAAGCATTGGGGTGATTTGGAGGAAGAGGAAGAGGAAGAGGTGGAGGAAGAAGATGAGGAGGAACTTGAAGAAGAAGAAATGGAAGATGGCATTGAATCTGTGGATAGTCAATCGAGGTATGGTATCAATTCATTGCCATTTTATTCCTTGGGTGTCTGTTTATAAAGACTTTGGTAATTATCCCATAGTTCTCATTTTGTTTAAATTGAGCCCCTCTTTAGCATAGTTGTGTTAGGTACTAGATATTTGGTATGATGTTAGTTAAGGGATATAAGGGTAATTAGGGAGGTAGGAACCTTCTAGTAGTAAGGGTGATGAAGGGTAAGTGAGAGTAAGATTATTTTGTGGAGTGATCTAGGGCTTGGGCGAGAGTATTCAAAAGGGGGGTTTCAAGTGCCTTATACTTGAGCTTCTTTCTAGTTATATTTCATTATATTCAGATCTTGTTCTTGTTGGGAAGTATCCTAACAAGTGGCTGTTTGGCTGTTCTGGGGGCTCTTTTTACATTATTATTATTTCTTTGTGTATTCTTTCATTTATTCTCGGTTGTTTATTCATAGAGGAAAAAATTGTTGCCATCTTAAAAACAAGCTCACCTATTCCCGATGCACTTTTAAATTTATCATTAGTTTTTCATTATTAGCTACTTAATTTTACTCTATGTATTGAACAGACAAATTATCTACTCAACTTAATTCTACCCTAAATTGTTGCCATCTTATGTCAAGCTCTAGTTTTGAAATCTTTTTCTTGGTTTAACCATCTTGAACGTTCTTATCTGAAAAAAATTACAGATAAATAAAAGAATGTTAACACTTCCAAACAAGACATAATGAAGAAAAGTTAAGGATACGGCATGCTATTTCAACATCATCAACATAGTTTGATTAAGACACTTAAGTTAGTATGCATACTTTGAATGTATTTGAATGGGTTTATTTACTGGGGTAATCCTGCCAAAAGAGTTGATATTCCAATTTGAGTTGGTATGTGGTTGGTAGCATGGTTTGAGGTTCTTTGTTTTTCAATAAAAGCCTTATCTTTAGCTATAATAGACTGAATTAAATAATTAAAACCAGTATACTACCCAAAACTGTTATATTCTGTTCCAATCATGTCCAAGTCCAATCCAACTGCATGTTTAAAATGAATAACTAATAGATGGAATGCTTATTTAGTTTTGTCTTATATGCATCTGCGTTTGCATGCCTTCATGACTGCATCCCAGATGTTTTGGACATCAAAACACGAACTTCGGAGTTTGTTTTTGCTTCTCTGTTCATTCTATTCTCCAGATTGATTAATGTCTATCCAAATTCTTAACCGTTGTGCTTATTCTTTAAAGCTGTTTAGTAACTGAAATTTCTGTTTCACGCAGCACTCCTACTGGCGTGGAGACACCTGATGTTATTGACCTTCGGAAACAACAGAGAAAGGAACCAGACAGGCCCCTTTACCAAGTAAGCAAACATCCTGTGAATGTTATTTTATCAGAACTTGTCTTCTTTCTATTTTTCTTTTTCAAACTGAAATATAATTTACTCTTTTATCTGTTTGGTTTTTGAAGGTCCTTGAAGAAAAGGAAGAGAGAGTTGCCCCTGGGACTTTGCTTGGAACTTCACATACGTATGGAATTTATTTGCTTTTATTTTTTTTATGATGGCCATCTAACTTTTCTTTCTTTTTGTGCTTAAATTGACACTTTGGTATGTTTGCCATTCTTCAGCTATGTTATTAGTGGTGGTACTCAAGATAAGACAGGAGCCAAAAGGGTAAGGAACTTTTTGATTTTGCCTTTTGAACATTGGAAAGGGTGTCGCTGATTACTCGACGATAAGTTAATCTGTCTTTTGTGGTTGTTTATCTTGTAGGTTGATTTGCTTAGAGGTCAAAAGTCTGATAAAGTGGATGTTACTTTACGACCTGAAGAATTGGAAGCTATGGAAAACGTTCTACCTGCGAAGTACGTAATTTCACCTGGATGTATAGTTTTAGCATTCATGTCATGCTGCAGGTGGCCAGCTCCTAATTCTCTATGTTCTCTTTCAACAGGTACGAGGAAGCTAGAGAAGAGGAGAAGTTACGGAGTCAGAGGGAGGACTTCAGCGACATGGTTGCAGAGGTTCAATTTTTTCTTGTCTTTTTTCTTTTTTAATCTAACGAATTAACCTATCAGTTCTTTCTTCTTTGTTTTTGTGGTAATGAGAAATTCTTTTGTCAAAAAACATATTTTGATCCAGAAAACTTTCTTGCAGAATGAGAAGAAAAGAAAACGTAAGATGCAAGAGAAGGAAGGGAAGTCTAAGAAGAAGGATTTCAAGTTCTAGACAATCTTTTGTTATGATAATCAAAAATCACTATTTGATCGAATTTGACTGCCATGCCCATCGTGCTTTTACTTGAAGCTGCTTTTGCTTTTGGTGGAGATGTTCTGATCTTGTGTAGTACCAAAATATGTGCAATCCTATATAAACTTCGGGATTGTAAGAGTTATTTCTAAAACCAGATCCTCTTTGTAGGATAATCTACATTGTAGTTAGTTGCATACGACTTTCCATGATGTAGTTTGCCATATTTAGTAGGGCACTGTATTCACTCTTTTCGATTCCCGAGCTTAGAATTGGCTACTGTGGTGTGACCGACTTATTTGAACAGTAGGTGCGATGGAAGAAGAGATAGGGCTCTTCCACAATGAGTTTTATGCTGTTTTGTCATGGCCTCTATGCCTTTTGTACTTTAAACACCAATTAACTCCTTGAAAAAGCATAAAATGGTGTTGCTCCTCAGTTATGGCCACTTGCATATACTTTCTTAAATTCTTTTGAAATGCCATTCAAATATGAGTTGGTTTACTAGG

mRNA sequence

ATCTAATTGAGCTGAGTGTATGTTAGCAATTGAATCTCCAACTTTGATAGAACATCTGCATGACTTAAGAGAAAGAGAAGGTGTTCTATTTTCGAAGGGTGAAAACGATTAATTTGGACAATTTACCGAAACAATCCTTAGGGCCTTCGGACTCTTCCTTTTCATCCCTTTCTCTTTCTCTTAGTTTCCCCCTCTCTCCCATCGACCTCCACCCAGGTTTCTTTCTTCTCCACCATCCCTTGTAGCGCCACACATCGCCACTTCGGCCTCACTCCTAACTTTCATTCATTCATTTCTTTATCCCTCAACCTCCACCATTTCTATTTGCGGTCGTCGGCGCATCTTTCCATCCATTTTCTTTTCTGCAACCTCACGTCGCAAGCTACCCTTTCCACAAATTCTCTCCCAATATATTTCTATGATTTTCCGCTCCTAACTTCTCCTTGTCTCTCGTTTTCTGCCCTCTCCGGAGAACCGACTAATAACCTGCTTATCTTCTTACCCTTGTTATCCTCCACCGCCGTGGCCTTGCAGGAAACAGCTGCGTGCGGGTTTGTTTATTGGTCGATTTGTGTGAAGACTGAATCCGAGCATGACTGTGGAGGTTTCTCAGCCAAATGGAGTTGTCTCGAATGGCGACTTGGACCTCAATTCTAACCCTAAATCTGGCGCCGTCAAGAAGTCACGAGAAAATGAACGACGTCGTCGTCGACGAAAGCAGAAGAAAAACCAGAAGGCTTCTAAGGTGAAGGAGGCTGCTGGTGGAGAAGACAGTGACGCTTCCGGCGATGACACGAAGGAGAATGATGATCCACTGCAGGTTGTTGAGAAAGTAGAAATTGAATATATACCTGAGAAGGCTGAACTAGATGATAGCTTGGATGAAGATTTTAGAAAAGTTTTTGAGAAATTCAGTTTCAGTGAGGTTGCTGGTGCTGAGGAGAATGAAGACAAAGATGAGTCTGCCCAAAATGCAACATCTAAGAAGTCAGACTCGGATTCTGATGATGAAGAACATGATAACCAACAAAAGGAAAAAGGCTTGTCAAACAAGAAAAAGAAGCTGCAACGGCGTATGAAAATTGCAGAATTGAAGCAGATTTGTTCGAGACCAGATGTTGTTGAGATCTGGGACGCAACTGCAGCTGATCCCAAGTTACTTGTTTATCTAAAATCTTATCGCAATACAGTTCCTGTGCCAAGGCATTGGTGTCAGAAAAGGAAATTTTTACAGGGGAAGCGTGGTATCGAGAAGCAACCATTCCAACTTCCAGATTTTATTGCAGCAACAGGAATTGAGAAAATTCGACAGGCGTACATAGAAAAAGAGGACAGTAAGAAATTGAAGCAAAAGCAAAGAGAACGAATGCAGCCAAAGATGGGAAAGATGGATATTGATTATCAGGTTCTTCATGATGCTTTTTTCAAGTACCAAACGAAGCCAAAGCTGACAACTCTTGGAGATCTGTACTACGAAGGGAAAGAATTCGAGGTTAAGTTAAGGGAGATGAAACCAGGCATGCTGTCACAAGAACTGAAAGAAGCGCTCGGTATGCCAGAAGGCGCTCCTCCTCCATGGCTCATCAACATGCAGAGATATGGTCCTCCACCATCCTATCCAGATCTCAAGATTCCAGGACTCAATGCTCCCATTCCACCTGGAGCTAGCTTTGGTTACCATCCTGGTGGCTGGGGCAAGCCTCCTGTGGATGAATACGGCCGTCCACTGTATGGAGATGTGTTTGGTGTTCAGCAACAGGAGCAAGCTAACTACGAGGAGGAACCTGTTGATAAGACCAAGCATTGGGGTGATTTGGAGGAAGAGGAAGAGGAAGAGGTGGAGGAAGAAGATGAGGAGGAACTTGAAGAAGAAGAAATGGAAGATGGCATTGAATCTGTGGATAGTCAATCGAGCACTCCTACTGGCGTGGAGACACCTGATGTTATTGACCTTCGGAAACAACAGAGAAAGGAACCAGACAGGCCCCTTTACCAAGTCCTTGAAGAAAAGGAAGAGAGAGTTGCCCCTGGGACTTTGCTTGGAACTTCACATACCTATGTTATTAGTGGTGGTACTCAAGATAAGACAGGAGCCAAAAGGGTTGATTTGCTTAGAGGTCAAAAGTCTGATAAAGTGGATGTTACTTTACGACCTGAAGAATTGGAAGCTATGGAAAACGTTCTACCTGCGAAGTACGAGGAAGCTAGAGAAGAGGAGAAGTTACGGAGTCAGAGGGAGGACTTCAGCGACATGGTTGCAGAGAATGAGAAGAAAAGAAAACGTAAGATGCAAGAGAAGGAAGGGAAGTCTAAGAAGAAGGATTTCAAGTTCTAGACAATCTTTTGTTATGATAATCAAAAATCACTATTTGATCGAATTTGACTGCCATGCCCATCGTGCTTTTACTTGAAGCTGCTTTTGCTTTTGGTGGAGATGTTCTGATCTTGTGTAGTACCAAAATATGTGCAATCCTATATAAACTTCGGGATTGTAAGAGTTATTTCTAAAACCAGATCCTCTTTGTAGGATAATCTACATTGTAGTTAGTTGCATACGACTTTCCATGATGTAGTTTGCCATATTTAGTAGGGCACTGTATTCACTCTTTTCGATTCCCGAGCTTAGAATTGGCTACTGTGGTGTGACCGACTTATTTGAACAGTAGGTGCGATGGAAGAAGAGATAGGGCTCTTCCACAATGAGTTTTATGCTGTTTTGTCATGGCCTCTATGCCTTTTGTACTTTAAACACCAATTAACTCCTTGAAAAAGCATAAAATGGTGTTGCTCCTCAGTTATGGCCACTTGCATATACTTTCTTAAATTCTTTTGAAATGCCATTCAAATATGAGTTGGTTTACTAGG

Coding sequence (CDS)

ATGACTGTGGAGGTTTCTCAGCCAAATGGAGTTGTCTCGAATGGCGACTTGGACCTCAATTCTAACCCTAAATCTGGCGCCGTCAAGAAGTCACGAGAAAATGAACGACGTCGTCGTCGACGAAAGCAGAAGAAAAACCAGAAGGCTTCTAAGGTGAAGGAGGCTGCTGGTGGAGAAGACAGTGACGCTTCCGGCGATGACACGAAGGAGAATGATGATCCACTGCAGGTTGTTGAGAAAGTAGAAATTGAATATATACCTGAGAAGGCTGAACTAGATGATAGCTTGGATGAAGATTTTAGAAAAGTTTTTGAGAAATTCAGTTTCAGTGAGGTTGCTGGTGCTGAGGAGAATGAAGACAAAGATGAGTCTGCCCAAAATGCAACATCTAAGAAGTCAGACTCGGATTCTGATGATGAAGAACATGATAACCAACAAAAGGAAAAAGGCTTGTCAAACAAGAAAAAGAAGCTGCAACGGCGTATGAAAATTGCAGAATTGAAGCAGATTTGTTCGAGACCAGATGTTGTTGAGATCTGGGACGCAACTGCAGCTGATCCCAAGTTACTTGTTTATCTAAAATCTTATCGCAATACAGTTCCTGTGCCAAGGCATTGGTGTCAGAAAAGGAAATTTTTACAGGGGAAGCGTGGTATCGAGAAGCAACCATTCCAACTTCCAGATTTTATTGCAGCAACAGGAATTGAGAAAATTCGACAGGCGTACATAGAAAAAGAGGACAGTAAGAAATTGAAGCAAAAGCAAAGAGAACGAATGCAGCCAAAGATGGGAAAGATGGATATTGATTATCAGGTTCTTCATGATGCTTTTTTCAAGTACCAAACGAAGCCAAAGCTGACAACTCTTGGAGATCTGTACTACGAAGGGAAAGAATTCGAGGTTAAGTTAAGGGAGATGAAACCAGGCATGCTGTCACAAGAACTGAAAGAAGCGCTCGGTATGCCAGAAGGCGCTCCTCCTCCATGGCTCATCAACATGCAGAGATATGGTCCTCCACCATCCTATCCAGATCTCAAGATTCCAGGACTCAATGCTCCCATTCCACCTGGAGCTAGCTTTGGTTACCATCCTGGTGGCTGGGGCAAGCCTCCTGTGGATGAATACGGCCGTCCACTGTATGGAGATGTGTTTGGTGTTCAGCAACAGGAGCAAGCTAACTACGAGGAGGAACCTGTTGATAAGACCAAGCATTGGGGTGATTTGGAGGAAGAGGAAGAGGAAGAGGTGGAGGAAGAAGATGAGGAGGAACTTGAAGAAGAAGAAATGGAAGATGGCATTGAATCTGTGGATAGTCAATCGAGCACTCCTACTGGCGTGGAGACACCTGATGTTATTGACCTTCGGAAACAACAGAGAAAGGAACCAGACAGGCCCCTTTACCAAGTCCTTGAAGAAAAGGAAGAGAGAGTTGCCCCTGGGACTTTGCTTGGAACTTCACATACCTATGTTATTAGTGGTGGTACTCAAGATAAGACAGGAGCCAAAAGGGTTGATTTGCTTAGAGGTCAAAAGTCTGATAAAGTGGATGTTACTTTACGACCTGAAGAATTGGAAGCTATGGAAAACGTTCTACCTGCGAAGTACGAGGAAGCTAGAGAAGAGGAGAAGTTACGGAGTCAGAGGGAGGACTTCAGCGACATGGTTGCAGAGAATGAGAAGAAAAGAAAACGTAAGATGCAAGAGAAGGAAGGGAAGTCTAAGAAGAAGGATTTCAAGTTCTAG

Protein sequence

MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGEDSDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENEDKDESAQNATSKKSDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEEDEEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPGTLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEAREEEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF*

Homology

[Close]

BLAST of CSPI02G07450 vs. ExPASy Swiss-Prot
Match: Q13435 (Splicing factor 3B subunit 2 OS=Homo sapiens OX=9606 GN=SF3B2 PE=1 SV=2)

HSP 1 Score: 436.8 bits (1122), Expect = 3.8e-121
Identity = 291/592 (49.16%), Postives = 384/592 (64.86%), Query Frame = 0


Query: 27  AVKKSRENERRRRRRKQKKNQKASKVKEAAGGEDSDASGDDTKENDDPLQVVEKVEIEYI 86
           +V K  +N +RR R+K+KK Q+   V   + G D +     ++ +D P      VEIEY+
Sbjct: 317 SVSKKEKNRKRRNRKKKKKPQRVRGVSSESSG-DREKDSTRSRGSDSP---AADVEIEYV 376

Query: 87  PEKAELDDSLDEDFRKVFEKFSFSEVAGAE---ENEDKDESAQNATSKK---------SD 146
            E+ E+ +     F+++FE F  ++    E   E E  D+   +A  KK         SD
Sbjct: 377 TEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAPKKKGFEEEHKDSD 436

Query: 147 SDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIWDATAADPKLLVYLK 206
            DS D+E + + +   LS KK +   R  +AELKQ+ +RPDVVE+ D TA DPKLLV+LK
Sbjct: 437 DDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDVTAQDPKLLVHLK 496

Query: 207 SYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQK 266
           + RN+VPVPRHWC KRK+LQGKRGIEK PF+LPDFI  TGI+++R+A  EKE+ K +K K
Sbjct: 497 ATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREALQEKEEQKTMKSK 556

Query: 267 QRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFEVKLREMKPGMLSQE 326
            RE+++PKMGK+DIDYQ LHDAFFK+QTKPKLT  GDLYYEGKEFE +L+E KPG LS E
Sbjct: 557 MREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDE 616

Query: 327 LKEALGMPEG-----APPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASFGYHPGGWGK 386
           L+ +LGMP G      PPPWLI MQRYGPPPSYP+LKIPGLN+PIP   SFGYH GGWGK
Sbjct: 617 LRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPESCSFGYHAGGWGK 676

Query: 387 PPVDEYGRPLYGDVFGVQQQE-QANYEEEPVDKTKHWGDLEEEEEEEVEEEDEEELEEEE 446
           PPVDE G+PLYGDVFG    E Q   EEE +D+T  WG+LE  +EE  EEE+EEE +E++
Sbjct: 677 PPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTP-WGELEPSDEESSEEEEEEESDEDK 736

Query: 447 MED---------GIESVDSQSSTPTGVETPDVIDLRKQQRKE----PDRP-LYQVLEEKE 506
            ++         G+ +    SS P G+ETP++I+LRK++ +E     + P L+ VL EK 
Sbjct: 737 PDETGFITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGSETPQLFTVLPEKR 796

Query: 507 ERVAPGTLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAK 566
                G ++G++H Y +S     K  A     L+G     V+V L PEELE     +  K
Sbjct: 797 TATVGGAMMGSTHIYDMSTVMSRKGPAPE---LQG-----VEVALAPEELELDPMAMTQK 856

Query: 567 YEEAREEEKLRSQREDFSDMVAEN-----EKKRKRKMQEKEGKSKK-KDFKF 581
           YEE   E++ + ++EDFSDMVAE+     +KKRK + Q+  G SKK K+FKF
Sbjct: 857 YEEHVREQQAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDSRGGSKKYKEFKF 895

[Close]

BLAST of CSPI02G07450 vs. ExPASy Swiss-Prot
Match: Q9UUI3 (Pre-mRNA-splicing factor sap145 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sap145 PE=1 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.6e-87
Identity = 244/579 (42.14%), Postives = 334/579 (57.69%), Query Frame = 0


Query: 17  LDLNSNPKSGAVKKSRENERRRRRR--KQKKNQKASKVKEAAGGEDSDASGDDTKEND-- 76
           L+ N+  K+   KKSR   RR +++  ++K N  A   ++ +  +D     +D   ND  
Sbjct: 34  LERNNKQKN---KKSRNQVRREKKKLLREKTNSGAKLAEKNSDDKDQLTENNDNLYNDKK 93

Query: 77  --------DPLQVVEKVEIEYIPEKAELD--DSLDEDFRKVFEKFSFSEVAGAEEN-EDK 136
                   +    V+ +    I +  ELD  D L E F+ VF +F   +  G E++ ED 
Sbjct: 94  SNGNFYDTNKTDSVDGMVYTTIVDSVELDPNDPLIEQFKDVFNRF---KADGQEKDFEDT 153

Query: 137 DESAQNATSKKSDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIWD 196
           D+     +  +  S+ +++    QQ+EK LS KK +  +RM +A+LK +  + DVVE WD
Sbjct: 154 DKGQIMYSDDEILSEGEEDALQKQQEEK-LSKKKLRKLKRMTVAQLKMLSEKADVVEWWD 213

Query: 197 ATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQA 256
            ++ DP  L +LK+Y NTVPVPRHW QKR +L G+RGIE+Q F+LP +I ATGI ++R A
Sbjct: 214 VSSLDPLFLTHLKAYPNTVPVPRHWNQKRDYLSGQRGIERQLFELPSYIRATGIVQMRNA 273

Query: 257 YIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFEV 316
             E E    L+QK RER+QPKMGK+DIDYQ LHDAFF+YQTKP LT  G+ Y+EGKE E 
Sbjct: 274 VHENEADMPLRQKMRERVQPKMGKLDIDYQKLHDAFFRYQTKPVLTGFGECYFEGKELEA 333

Query: 317 KLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASFG 376
            ++E +PG +S+EL+EALG+  GAPPPWL  MQRYGPPPSYPDLKIPG+N PIP GA +G
Sbjct: 334 DVKEKRPGDISEELREALGIAPGAPPPWLFAMQRYGPPPSYPDLKIPGVNCPIPTGAQWG 393

Query: 377 YHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEEDE 436
           +HPGGWGKPPVD++ RPLYGDVFG  +         PV  T+HWG+LEE EEEE  EE+E
Sbjct: 394 FHPGGWGKPPVDQFNRPLYGDVFGNVKPRIHAGTGSPV-STQHWGELEEFEEEESSEEEE 453

Query: 437 --------EELEEEEMEDGIESVDSQSS-------------TPTGVETPDVIDLRKQQRK 496
                   EE+ E E  +  +S     S               + VE  D ++LRK  + 
Sbjct: 454 SEDVEYPTEEITERETIEEYQSASEPRSQREDLHAEPLTYFNQSNVEV-DNVELRKNTQP 513

Query: 497 EPD---RPLYQVLEEKEERVAPGTLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDV 552
             D   R LYQVL EK   ++    +G  H Y I    +D    KR        ++K DV
Sbjct: 514 SSDAANRDLYQVLPEKSTNIS--GFMGPQHQYDIP-TAEDTLPQKRNAHSMLSSTNKGDV 573

[Close]

BLAST of CSPI02G07450 vs. ExPASy Swiss-Prot
Match: Q02554 (Cold sensitive U2 snRNA suppressor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CUS1 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 4.1e-30
Identity = 123/383 (32.11%), Postives = 201/383 (52.48%), Query Frame = 0


Query: 92  LDDSLDEDFRKVFEKFSFSEVAGAEENEDKDESAQNAT--------SKKSDSDSDDEEHD 151
           +D  L+++F+ V ++F   E    +E   KDE   +          ++K  ++ + E+  
Sbjct: 55  VDAKLEKEFKDVLQRFQVQENDTPKE-ITKDEKNNHVVIVEKNPVMNRKHTAEDELEDTP 114

Query: 152 NQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIWDATAADPKLLVYLKSYRNTVPVP 211
           +   E+ LS +K++   +  +++LK     P ++E +D  A  P LL  +K  +N +PVP
Sbjct: 115 SDGIEEHLSARKRRKTEKPSLSQLKSQVPYPQIIEWYDCDARYPGLLASIKCTKNVIPVP 174

Query: 212 RHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIR----QAYIEKEDSKKLKQKQRERM 271
            HW  K+++L G+  + K+PF+LPD I  T IE++R    Q+ ++ +D K LK+  R R+
Sbjct: 175 SHWQSKKEYLSGRSLLGKRPFELPDIIKKTNIEQMRSTLPQSGLDGQDEKSLKEASRARV 234

Query: 272 QPKMGKMDIDYQVLHDAFFKYQTKPK---LTTLGDLYYEGKEF--EVKLREM----KPGM 331
           QPKMG +D+DY+ LHD FFK     K   L   GD+YYE +    E   + M    +PG 
Sbjct: 235 QPKMGALDLDYKKLHDVFFKIGANWKPDHLLCFGDVYYENRNLFEETNWKRMVDHKRPGR 294

Query: 332 LSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIP--PGASFG-YHPGGW 391
           +SQEL+  + +PEG  PPW + M+  G P  YPDLKI GLN  I    G  +G   P   
Sbjct: 295 ISQELRAIMNLPEGQLPPWCMKMKDIGLPTGYPDLKIAGLNWDITNLKGDVYGKIIPNHH 354

Query: 392 GKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE------EEDE 443
            +    + GR  +G +   +  E  N +E+     ++ G  +++ ++EVE      +ED 
Sbjct: 355 SRS--KKQGRNYFGALISFETPEFENSKEDTQANAEN-GRQDDKIDDEVEHKLDHFQEDI 414

[Close]

BLAST of CSPI02G07450 vs. ExPASy TrEMBL
Match: A0A0A0LMT1 (PSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G075450 PE=4 SV=1)

HSP 1 Score: 1082.4 bits (2798), Expect = 0.0e+00
Identity = 580/580 (100.00%), Postives = 580/580 (100.00%), Query Frame = 0


Query: 1   MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGED 60
           MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGED
Sbjct: 1   MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGED 60

Query: 61  SDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENED 120
           SDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENED
Sbjct: 61  SDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENED 120

Query: 121 KDESAQNATSKKSDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180
           KDESAQNATSKKSDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW
Sbjct: 121 KDESAQNATSKKSDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180

Query: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240
           DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ
Sbjct: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240

Query: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300
           AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE
Sbjct: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300

Query: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360
           VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF
Sbjct: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360

Query: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED 420
           GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED
Sbjct: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED 420

Query: 421 EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG 480
           EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG
Sbjct: 421 EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG 480

Query: 481 TLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE 540
           TLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE
Sbjct: 481 TLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE 540

Query: 541 EEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF 581
           EEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF
Sbjct: 541 EEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF 580

[Close]

BLAST of CSPI02G07450 vs. ExPASy TrEMBL
Match: A0A1S3B4C3 (splicing factor 3B subunit 2 OS=Cucumis melo OX=3656 GN=LOC103485870 PE=4 SV=1)

HSP 1 Score: 1070.5 bits (2767), Expect = 2.6e-309
Identity = 573/580 (98.79%), Postives = 579/580 (99.83%), Query Frame = 0


Query: 1   MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGED 60
           MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRE+ERRRRRRKQKKNQKASKVKEAAGG+D
Sbjct: 1   MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRESERRRRRRKQKKNQKASKVKEAAGGDD 60

Query: 61  SDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENED 120
           SDASGDDTKENDDPLQVVEKVEIEY+PEKAELDDSLDEDFRKVFEKF+FSEVAGAEENE+
Sbjct: 61  SDASGDDTKENDDPLQVVEKVEIEYVPEKAELDDSLDEDFRKVFEKFTFSEVAGAEENEN 120

Query: 121 KDESAQNATSKKSDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180
           KDESAQNATSKKSDSDSDDEE DNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW
Sbjct: 121 KDESAQNATSKKSDSDSDDEELDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180

Query: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240
           DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ
Sbjct: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240

Query: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300
           AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE
Sbjct: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300

Query: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360
           VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF
Sbjct: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360

Query: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED 420
           GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED
Sbjct: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED 420

Query: 421 EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG 480
           EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG
Sbjct: 421 EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG 480

Query: 481 TLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE 540
           TLLGT+HTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE
Sbjct: 481 TLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE 540

Query: 541 EEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF 581
           EEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF
Sbjct: 541 EEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF 580

[Close]

BLAST of CSPI02G07450 vs. ExPASy TrEMBL
Match: A0A5D3C716 (Splicing factor 3B subunit 2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G001390 PE=4 SV=1)

HSP 1 Score: 1034.2 bits (2673), Expect = 2.0e-298
Identity = 550/557 (98.74%), Postives = 556/557 (99.82%), Query Frame = 0


Query: 1   MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGED 60
           MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRE+ERRRRRRKQKKNQKASKVKEAAGG+D
Sbjct: 1   MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRESERRRRRRKQKKNQKASKVKEAAGGDD 60

Query: 61  SDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENED 120
           SDASGDDTKENDDPLQVVEKVEIEY+PEKAELDDSLDEDFRKVFEKF+FSEVAGAEENE+
Sbjct: 61  SDASGDDTKENDDPLQVVEKVEIEYVPEKAELDDSLDEDFRKVFEKFTFSEVAGAEENEN 120

Query: 121 KDESAQNATSKKSDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180
           KDESAQNATSKKSDSDSDDEE DNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW
Sbjct: 121 KDESAQNATSKKSDSDSDDEELDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180

Query: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240
           DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ
Sbjct: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240

Query: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300
           AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE
Sbjct: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300

Query: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360
           VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF
Sbjct: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360

Query: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED 420
           GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED
Sbjct: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED 420

Query: 421 EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG 480
           EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG
Sbjct: 421 EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG 480

Query: 481 TLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE 540
           TLLGT+HTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE
Sbjct: 481 TLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE 540

Query: 541 EEKLRSQREDFSDMVAE 558
           EEKLRSQREDFSDMVAE
Sbjct: 541 EEKLRSQREDFSDMVAE 557

[Close]

BLAST of CSPI02G07450 vs. ExPASy TrEMBL
Match: A0A6J1EV51 (splicing factor 3B subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111436228 PE=4 SV=1)

HSP 1 Score: 1032.3 bits (2668), Expect = 7.6e-298
Identity = 556/581 (95.70%), Postives = 568/581 (97.76%), Query Frame = 0


Query: 1   MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGED 60
           MT EVSQ NGVVSNGDLDLNSNPKSGA KKSRE+ERRRRRRKQKKNQKASKV EA  GED
Sbjct: 1   MTAEVSQSNGVVSNGDLDLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKV-EATAGED 60

Query: 61  SDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENED 120
           SDASGDDTKEND+PLQVVEKVEIEY+PEKAELDDSLDE+FRKVFEKFSFSE+AG EENE+
Sbjct: 61  SDASGDDTKENDNPLQVVEKVEIEYVPEKAELDDSLDEEFRKVFEKFSFSEIAGTEENEN 120

Query: 121 KDESAQNATSKKSDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180
           KDESAQNA SKKSDSDSDDEE DNQQKEKGLSNKKKKLQRRMKIAELKQIC RPDVVEIW
Sbjct: 121 KDESAQNAASKKSDSDSDDEELDNQQKEKGLSNKKKKLQRRMKIAELKQICLRPDVVEIW 180

Query: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240
           DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ
Sbjct: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240

Query: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300
           AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE
Sbjct: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300

Query: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360
           VKLREMKPGMLS ELKEALGMP+GAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF
Sbjct: 301 VKLREMKPGMLSHELKEALGMPDGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360

Query: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEV-EEE 420
           GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEV EEE
Sbjct: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEEE 420

Query: 421 DEEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAP 480
           DEEELEEEEM+DGIESVDS SSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEE+VAP
Sbjct: 421 DEEELEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEEKVAP 480

Query: 481 GTLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEAR 540
           GTLLGT+HTYVISGGTQDKTGAKRVDLLRGQK+DKVDVTLRPEELEAMENVLPAKYEEAR
Sbjct: 481 GTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKTDKVDVTLRPEELEAMENVLPAKYEEAR 540

Query: 541 EEEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF 581
           EEEKLRSQREDFSDMVAENEKKRKRKMQEK+GKSKKKDFKF
Sbjct: 541 EEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF 580

[Close]

BLAST of CSPI02G07450 vs. ExPASy TrEMBL
Match: A0A6J1FHL4 (splicing factor 3B subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111444220 PE=4 SV=1)

HSP 1 Score: 1031.6 bits (2666), Expect = 1.3e-297
Identity = 558/583 (95.71%), Postives = 571/583 (97.94%), Query Frame = 0


Query: 1   MTVEV-SQPNGVVSN-GDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGG 60
           MT EV SQPNGVV+N GD DLNSNPKSGA KKSRE+ERRRRRRKQKKNQKASKVKEAAGG
Sbjct: 1   MTAEVISQPNGVVANGGDFDLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKVKEAAGG 60

Query: 61  EDSDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEEN 120
           EDSDASGDDTKENDD LQVVEKVEIEY+PEKAELDDSLDE+FR+VFEKF+FS+VAG EEN
Sbjct: 61  EDSDASGDDTKENDDLLQVVEKVEIEYVPEKAELDDSLDEEFRRVFEKFNFSDVAGVEEN 120

Query: 121 EDKDESAQNATSKKSDSDSDDEEHDNQQKEK-GLSNKKKKLQRRMKIAELKQICSRPDVV 180
           E+KDESAQNA SKKSDSDSDDEE DNQQKEK GLSNKKKKLQRRMKIAELKQIC RPDVV
Sbjct: 121 ENKDESAQNAASKKSDSDSDDEELDNQQKEKGGLSNKKKKLQRRMKIAELKQICLRPDVV 180

Query: 181 EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK 240
           EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK
Sbjct: 181 EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK 240

Query: 241 IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK 300
           IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK
Sbjct: 241 IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK 300

Query: 301 EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG 360
           EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG
Sbjct: 301 EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG 360

Query: 361 ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE 420
           ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE
Sbjct: 361 ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVE 420

Query: 421 EEDEEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERV 480
           EEDEEE+EEEEM+DGIESVDS SSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEE+V
Sbjct: 421 EEDEEEIEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEEKV 480

Query: 481 APGTLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE 540
           APGTLLGT+HTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE
Sbjct: 481 APGTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE 540

Query: 541 AREEEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF 581
           AREEEKLRSQREDFSDMVAENEKKRKRKMQEK+GKSKKKDFKF
Sbjct: 541 AREEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF 583

[Close]

BLAST of CSPI02G07450 vs. NCBI nr
Match: XP_004152814.1 (splicing factor 3B subunit 2 [Cucumis sativus] >KGN61286.1 hypothetical protein Csa_006058 [Cucumis sativus])

HSP 1 Score: 1082.4 bits (2798), Expect = 0.0e+00
Identity = 580/580 (100.00%), Postives = 580/580 (100.00%), Query Frame = 0


Query: 1   MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGED 60
           MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGED
Sbjct: 1   MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGED 60

Query: 61  SDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENED 120
           SDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENED
Sbjct: 61  SDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENED 120

Query: 121 KDESAQNATSKKSDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180
           KDESAQNATSKKSDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW
Sbjct: 121 KDESAQNATSKKSDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180

Query: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240
           DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ
Sbjct: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240

Query: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300
           AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE
Sbjct: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300

Query: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360
           VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF
Sbjct: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360

Query: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED 420
           GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED
Sbjct: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED 420

Query: 421 EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG 480
           EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG
Sbjct: 421 EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG 480

Query: 481 TLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE 540
           TLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE
Sbjct: 481 TLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE 540

Query: 541 EEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF 581
           EEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF
Sbjct: 541 EEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF 580

[Close]

BLAST of CSPI02G07450 vs. NCBI nr
Match: XP_008441818.1 (PREDICTED: splicing factor 3B subunit 2 [Cucumis melo])

HSP 1 Score: 1070.5 bits (2767), Expect = 5.4e-309
Identity = 573/580 (98.79%), Postives = 579/580 (99.83%), Query Frame = 0


Query: 1   MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGED 60
           MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRE+ERRRRRRKQKKNQKASKVKEAAGG+D
Sbjct: 1   MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRESERRRRRRKQKKNQKASKVKEAAGGDD 60

Query: 61  SDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENED 120
           SDASGDDTKENDDPLQVVEKVEIEY+PEKAELDDSLDEDFRKVFEKF+FSEVAGAEENE+
Sbjct: 61  SDASGDDTKENDDPLQVVEKVEIEYVPEKAELDDSLDEDFRKVFEKFTFSEVAGAEENEN 120

Query: 121 KDESAQNATSKKSDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180
           KDESAQNATSKKSDSDSDDEE DNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW
Sbjct: 121 KDESAQNATSKKSDSDSDDEELDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180

Query: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240
           DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ
Sbjct: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240

Query: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300
           AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE
Sbjct: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300

Query: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360
           VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF
Sbjct: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360

Query: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED 420
           GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED
Sbjct: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED 420

Query: 421 EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG 480
           EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG
Sbjct: 421 EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG 480

Query: 481 TLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE 540
           TLLGT+HTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE
Sbjct: 481 TLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE 540

Query: 541 EEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF 581
           EEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF
Sbjct: 541 EEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF 580

[Close]

BLAST of CSPI02G07450 vs. NCBI nr
Match: XP_038890808.1 (splicing factor 3B subunit 2 [Benincasa hispida] >XP_038890809.1 splicing factor 3B subunit 2 [Benincasa hispida] >XP_038890810.1 splicing factor 3B subunit 2 [Benincasa hispida])

HSP 1 Score: 1056.6 bits (2731), Expect = 7.8e-305
Identity = 567/580 (97.76%), Postives = 573/580 (98.79%), Query Frame = 0


Query: 1   MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGED 60
           MT EVSQPNGVVSNGDLDLNSNPKSGA KKSRE+ERRRRRRKQKKNQKASKVKEAA GED
Sbjct: 1   MTAEVSQPNGVVSNGDLDLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKVKEAAAGED 60

Query: 61  SDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENED 120
           SDASGDDTKENDDPLQVVEKVEIEY+PEKAELDD+LDE+FRKVFEKFSFSEVAGAEENE+
Sbjct: 61  SDASGDDTKENDDPLQVVEKVEIEYVPEKAELDDNLDEEFRKVFEKFSFSEVAGAEENEN 120

Query: 121 KDESAQNATSKKSDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180
           KDESAQNA SKKSDSDSDDEE D QQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW
Sbjct: 121 KDESAQNAASKKSDSDSDDEELDIQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180

Query: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240
           DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ
Sbjct: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240

Query: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300
           AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE
Sbjct: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300

Query: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360
           VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF
Sbjct: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360

Query: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED 420
           GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED
Sbjct: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED 420

Query: 421 EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG 480
           EEELEEEEMEDGIESVDS SSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG
Sbjct: 421 EEELEEEEMEDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG 480

Query: 481 TLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE 540
           TLLGT+HTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE
Sbjct: 481 TLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE 540

Query: 541 EEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF 581
           EEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF
Sbjct: 541 EEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF 580

[Close]

BLAST of CSPI02G07450 vs. NCBI nr
Match: TYK07713.1 (splicing factor 3B subunit 2 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 1034.2 bits (2673), Expect = 4.1e-298
Identity = 550/557 (98.74%), Postives = 556/557 (99.82%), Query Frame = 0


Query: 1   MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGED 60
           MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRE+ERRRRRRKQKKNQKASKVKEAAGG+D
Sbjct: 1   MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRESERRRRRRKQKKNQKASKVKEAAGGDD 60

Query: 61  SDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENED 120
           SDASGDDTKENDDPLQVVEKVEIEY+PEKAELDDSLDEDFRKVFEKF+FSEVAGAEENE+
Sbjct: 61  SDASGDDTKENDDPLQVVEKVEIEYVPEKAELDDSLDEDFRKVFEKFTFSEVAGAEENEN 120

Query: 121 KDESAQNATSKKSDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180
           KDESAQNATSKKSDSDSDDEE DNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW
Sbjct: 121 KDESAQNATSKKSDSDSDDEELDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180

Query: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240
           DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ
Sbjct: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240

Query: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300
           AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE
Sbjct: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300

Query: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360
           VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF
Sbjct: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360

Query: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED 420
           GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED
Sbjct: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEED 420

Query: 421 EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG 480
           EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG
Sbjct: 421 EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAPG 480

Query: 481 TLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE 540
           TLLGT+HTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE
Sbjct: 481 TLLGTTHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEARE 540

Query: 541 EEKLRSQREDFSDMVAE 558
           EEKLRSQREDFSDMVAE
Sbjct: 541 EEKLRSQREDFSDMVAE 557

[Close]

BLAST of CSPI02G07450 vs. NCBI nr
Match: XP_022929730.1 (splicing factor 3B subunit 2-like [Cucurbita moschata])

HSP 1 Score: 1032.3 bits (2668), Expect = 1.6e-297
Identity = 556/581 (95.70%), Postives = 568/581 (97.76%), Query Frame = 0


Query: 1   MTVEVSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGED 60
           MT EVSQ NGVVSNGDLDLNSNPKSGA KKSRE+ERRRRRRKQKKNQKASKV EA  GED
Sbjct: 1   MTAEVSQSNGVVSNGDLDLNSNPKSGAAKKSRESERRRRRRKQKKNQKASKV-EATAGED 60

Query: 61  SDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENED 120
           SDASGDDTKEND+PLQVVEKVEIEY+PEKAELDDSLDE+FRKVFEKFSFSE+AG EENE+
Sbjct: 61  SDASGDDTKENDNPLQVVEKVEIEYVPEKAELDDSLDEEFRKVFEKFSFSEIAGTEENEN 120

Query: 121 KDESAQNATSKKSDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEIW 180
           KDESAQNA SKKSDSDSDDEE DNQQKEKGLSNKKKKLQRRMKIAELKQIC RPDVVEIW
Sbjct: 121 KDESAQNAASKKSDSDSDDEELDNQQKEKGLSNKKKKLQRRMKIAELKQICLRPDVVEIW 180

Query: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240
           DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ
Sbjct: 181 DATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240

Query: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300
           AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE
Sbjct: 241 AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFE 300

Query: 301 VKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360
           VKLREMKPGMLS ELKEALGMP+GAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF
Sbjct: 301 VKLREMKPGMLSHELKEALGMPDGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASF 360

Query: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEV-EEE 420
           GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEV EEE
Sbjct: 361 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEEE 420

Query: 421 DEEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERVAP 480
           DEEELEEEEM+DGIESVDS SSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEE+VAP
Sbjct: 421 DEEELEEEEMQDGIESVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEEKVAP 480

Query: 481 GTLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEAR 540
           GTLLGT+HTYVISGGTQDKTGAKRVDLLRGQK+DKVDVTLRPEELEAMENVLPAKYEEAR
Sbjct: 481 GTLLGTTHTYVISGGTQDKTGAKRVDLLRGQKTDKVDVTLRPEELEAMENVLPAKYEEAR 540

Query: 541 EEEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF 581
           EEEKLRSQREDFSDMVAENEKKRKRKMQEK+GKSKKKDFKF
Sbjct: 541 EEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF 580

[Close]

BLAST of CSPI02G07450 vs. TAIR 10
Match: AT4G21660.1 (proline-rich spliceosome-associated (PSP) family protein )

HSP 1 Score: 795.4 bits (2053), Expect = 3.0e-230
Identity = 447/585 (76.41%), Postives = 504/585 (86.15%), Query Frame = 0


Query: 5   VSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGEDSDAS 64
           V+  + VVSNGD+  N N  S + KKSRE +RRRRRRKQKKN KAS+    A  + SD S
Sbjct: 7   VALVHSVVSNGDVS-NGN-TSASSKKSREIDRRRRRRKQKKNNKASQ----ADVDASDVS 66

Query: 65  -GDDTKENDDPL-QVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENEDKD 124
              ++KEN DP  QV E++ IEY+PE+AE +D  +++F+++FEKF+F E   +EE+  KD
Sbjct: 67  AASESKENTDPQPQVCEQIVIEYVPEQAEFEDGFNDEFKEIFEKFNFREPLASEEDGTKD 126

Query: 125 ESAQNATSKK---SDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEI 184
           ES +    KK   SDSDSDD+E DNQ KEKG+SNKKKKLQRRMKIAELKQ+ +RPDVVE+
Sbjct: 127 ESEEKEDVKKKVNSDSDSDDDEQDNQNKEKGISNKKKKLQRRMKIAELKQVSARPDVVEV 186

Query: 185 WDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIR 244
           WDAT+ADPKLLV+LKSYRNTVPVPRHW QKRK+LQGKRGIEKQPF LPDFIAATGIEKIR
Sbjct: 187 WDATSADPKLLVFLKSYRNTVPVPRHWSQKRKYLQGKRGIEKQPFHLPDFIAATGIEKIR 246

Query: 245 QAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEF 304
           QAYIEKED KKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKL+ LGDLY+EGKEF
Sbjct: 247 QAYIEKEDGKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLSALGDLYFEGKEF 306

Query: 305 EVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGAS 364
           EVKLRE KPG LS +LKEALGMPEGAPPPWLINMQRYGPPPSYP LKIPGLNAPIP GAS
Sbjct: 307 EVKLRETKPGFLSNDLKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPIGAS 366

Query: 365 FGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLEEEEEEEVEEE 424
           FG+H GGWGKPPVDEYGRPLYGDVFGVQQQ+Q NYEEEP+DK+KHWGDLEEEEEEE EEE
Sbjct: 367 FGFHAGGWGKPPVDEYGRPLYGDVFGVQQQDQPNYEEEPIDKSKHWGDLEEEEEEEEEEE 426

Query: 425 D--EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEERV 484
           +  EEE++EEE+EDG ESVD+ SSTPTG+ETPD I+LRK QRKEPDR LYQVLEEK E V
Sbjct: 427 EEQEEEMDEEELEDGTESVDTLSSTPTGIETPDAIELRKDQRKEPDRALYQVLEEKGESV 486

Query: 485 APGTLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEE 544
           APGTLLGTSHTYVI  GTQ+KTGAKRVDLLRGQK+D+VDV+L+PEEL+AMENVLPAKYEE
Sbjct: 487 APGTLLGTSHTYVIKTGTQEKTGAKRVDLLRGQKTDRVDVSLQPEELDAMENVLPAKYEE 546

Query: 545 AREEEKLRSQREDFSDMVAEN--EKKRKRKMQEKEGKSKKKDFKF 581
           AREEEKLR++  D SDMV E+  +  RKRKM +KEGK KKKDFKF
Sbjct: 547 AREEEKLRNKPVDLSDMVVEHVQQNSRKRKMHDKEGK-KKKDFKF 584

[Close]

BLAST of CSPI02G07450 vs. TAIR 10
Match: AT4G21660.2 (proline-rich spliceosome-associated (PSP) family protein )

HSP 1 Score: 785.8 bits (2028), Expect = 2.4e-227
Identity = 447/599 (74.62%), Postives = 504/599 (84.14%), Query Frame = 0


Query: 5   VSQPNGVVSNGDLDLNSNPKSGAVKKSRENERRRRRRKQKKNQKASKVKEAAGGEDSDAS 64
           V+  + VVSNGD+  N N  S + KKSRE +RRRRRRKQKKN KAS+    A  + SD S
Sbjct: 7   VALVHSVVSNGDVS-NGN-TSASSKKSREIDRRRRRRKQKKNNKASQ----ADVDASDVS 66

Query: 65  -GDDTKENDDPL-QVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENEDKD 124
              ++KEN DP  QV E++ IEY+PE+AE +D  +++F+++FEKF+F E   +EE+  KD
Sbjct: 67  AASESKENTDPQPQVCEQIVIEYVPEQAEFEDGFNDEFKEIFEKFNFREPLASEEDGTKD 126

Query: 125 ESAQNATSKK---SDSDSDDEEHDNQQKEKGLSNKKKKLQRRMKIAELKQICSRPDVVEI 184
           ES +    KK   SDSDSDD+E DNQ KEKG+SNKKKKLQRRMKIAELKQ+ +RPDVVE+
Sbjct: 127 ESEEKEDVKKKVNSDSDSDDDEQDNQNKEKGISNKKKKLQRRMKIAELKQVSARPDVVEV 186

Query: 185 WDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQ--------------GKRGIEKQPFQ 244
           WDAT+ADPKLLV+LKSYRNTVPVPRHW QKRK+LQ              GKRGIEKQPF 
Sbjct: 187 WDATSADPKLLVFLKSYRNTVPVPRHWSQKRKYLQGNYIKRDRNVCDNHGKRGIEKQPFH 246

Query: 245 LPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPK 304
           LPDFIAATGIEKIRQAYIEKED KKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPK
Sbjct: 247 LPDFIAATGIEKIRQAYIEKEDGKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPK 306

Query: 305 LTTLGDLYYEGKEFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDL 364
           L+ LGDLY+EGKEFEVKLRE KPG LS +LKEALGMPEGAPPPWLINMQRYGPPPSYP L
Sbjct: 307 LSALGDLYFEGKEFEVKLRETKPGFLSNDLKEALGMPEGAPPPWLINMQRYGPPPSYPHL 366

Query: 365 KIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHW 424
           KIPGLNAPIP GASFG+H GGWGKPPVDEYGRPLYGDVFGVQQQ+Q NYEEEP+DK+KHW
Sbjct: 367 KIPGLNAPIPIGASFGFHAGGWGKPPVDEYGRPLYGDVFGVQQQDQPNYEEEPIDKSKHW 426

Query: 425 GDLEEEEEEEVEEED--EEELEEEEMEDGIESVDSQSSTPTGVETPDVIDLRKQQRKEPD 484
           GDLEEEEEEE EEE+  EEE++EEE+EDG ESVD+ SSTPTG+ETPD I+LRK QRKEPD
Sbjct: 427 GDLEEEEEEEEEEEEEQEEEMDEEELEDGTESVDTLSSTPTGIETPDAIELRKDQRKEPD 486

Query: 485 RPLYQVLEEKEERVAPGTLLGTSHTYVISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEE 544
           R LYQVLEEK E VAPGTLLGTSHTYVI  GTQ+KTGAKRVDLLRGQK+D+VDV+L+PEE
Sbjct: 487 RALYQVLEEKGESVAPGTLLGTSHTYVIKTGTQEKTGAKRVDLLRGQKTDRVDVSLQPEE 546

Query: 545 LEAMENVLPAKYEEAREEEKLRSQREDFSDMVAEN--EKKRKRKMQEKEGKSKKKDFKF 581
           L+AMENVLPAKYEEAREEEKLR++  D SDMV E+  +  RKRKM +KEGK KKKDFKF
Sbjct: 547 LDAMENVLPAKYEEAREEEKLRNKPVDLSDMVVEHVQQNSRKRKMHDKEGK-KKKDFKF 598

[Close]

BLAST of CSPI02G07450 vs. TAIR 10
Match: AT1G11520.1 (pliceosome associated protein-related )

HSP 1 Score: 150.2 bits (378), Expect = 5.1e-36
Identity = 84/114 (73.68%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 431 DGIESVDSQSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEK-EERVAPGTLLGTSHTY 490
           D ++   S SSTPTG+ETPD I+LRK+QRKEPDR LYQVLEEK E  VAPGTLL T+HTY
Sbjct: 85  DAMDVSKSLSSTPTGIETPDAIELRKEQRKEPDRALYQVLEEKGESVVAPGTLLRTTHTY 144

Query: 491 VISGGTQDKTGAKRVDLLRGQKSDKVDVTLRPEELEAMENVLPAKYEEAREEEK 544
           VI  GTQDKTG KRVDLLRGQK+D+VD +L+PEEL+AM NVL  +YEEAREEEK
Sbjct: 145 VIKTGTQDKTGTKRVDLLRGQKTDRVDFSLQPEELDAMGNVL--QYEEAREEEK 196

The following BLAST results are available for this feature:

BLAST of CSPI02G07450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q13435	3.8e-121	49.16	Splicing factor 3B subunit 2 OS=Homo sapiens OX=9606 GN=SF3B2 PE=1 SV=2	[more]
Q9UUI3	1.6e-87	42.14	Pre-mRNA-splicing factor sap145 OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]
Q02554	4.1e-30	32.11	Cold sensitive U2 snRNA suppressor 1 OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of CSPI02G07450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMT1	0.0e+00	100.00	PSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G075450 PE=4 SV...	[more]
A0A1S3B4C3	2.6e-309	98.79	splicing factor 3B subunit 2 OS=Cucumis melo OX=3656 GN=LOC103485870 PE=4 SV=1	[more]
A0A5D3C716	2.0e-298	98.74	Splicing factor 3B subunit 2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1EV51	7.6e-298	95.70	splicing factor 3B subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111436228 ...	[more]
A0A6J1FHL4	1.3e-297	95.71	splicing factor 3B subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111444220 ...	[more]

BLAST of CSPI02G07450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152814.1	0.0e+00	100.00	splicing factor 3B subunit 2 [Cucumis sativus] >KGN61286.1 hypothetical protein ...	[more]
XP_008441818.1	5.4e-309	98.79	PREDICTED: splicing factor 3B subunit 2 [Cucumis melo]	[more]
XP_038890808.1	7.8e-305	97.76	splicing factor 3B subunit 2 [Benincasa hispida] >XP_038890809.1 splicing factor...	[more]
TYK07713.1	4.1e-298	98.74	splicing factor 3B subunit 2 isoform X2 [Cucumis melo var. makuwa]	[more]
XP_022929730.1	1.6e-297	95.70	splicing factor 3B subunit 2-like [Cucurbita moschata]	[more]

BLAST of CSPI02G07450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21660.1	3.0e-230	76.41	proline-rich spliceosome-associated (PSP) family protein	[more]
AT4G21660.2	2.4e-227	74.62	proline-rich spliceosome-associated (PSP) family protein	[more]
AT1G11520.1	5.1e-36	73.68	pliceosome associated protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 407..430
None	No IPR available	COILS	Coil	Coil	coord: 148..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 452..473
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 393..473
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 394..408
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 534..580
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 409..434
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..152
None	No IPR available	PANTHER	PTHR12785:SF13	SPLICING FACTOR 3B SUBUNIT 2-LIKE	coord: 11..580
None	No IPR available	PANTHER	PTHR12785	SPLICING FACTOR 3B	coord: 11..580
IPR006568	PSP, proline-rich	SMART	SM00581	testneu	coord: 303..356 e-value: 1.2E-27 score: 107.8
IPR006568	PSP, proline-rich	PFAM	PF04046	PSP	coord: 307..352 e-value: 3.6E-22 score: 78.0
IPR007180	Domain of unknown function DUF382	PFAM	PF04037	DUF382	coord: 173..298 e-value: 2.1E-59 score: 199.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G07450.1	CSPI02G07450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0071011	precatalytic spliceosome
cellular_component	GO:0005689	U12-type spliceosomal complex
cellular_component	GO:0005686	U2 snRNP
cellular_component	GO:0005684	U2-type spliceosomal complex
cellular_component	GO:0005634	nucleus