CSPI02G07380 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G07380
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 6313334 .. 6313645 (+)
RNA-Seq ExpressionCSPI02G07380
SyntenyCSPI02G07380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTGAAGTGGGTATTGTTTTGTTCATCAAGTGAATGGGAGTTTCTTGCTTGGGATTTCGTTCTTTGGGGCTTTCAAGCTCTGTGTTTACTTTATTTATAAATGGGTTTTCATTCTGTTTATTGTTTCTTCTGCAGATTTGGGGTTTCTGATTGCTTCATTGTGTGGCAGAAGGCAGCAGAGTTTGAGATCAGGCTGTTTGTGTGGTGTCTGTCAGTTCAGTTAGCTGCTGAAAATGGTCGAGATTTGAGGACGACGAAGTTATGTGAGTTATCTGATTTGAGGCTCTTTCGGTTGTCTAGCTACTGA

mRNA sequence

ATGGAATTGAAGTGGGTATTGTTTTGTTCATCAAGTGAATGGGAGTTTCTTGCTTGGGATTTCGTTCTTTGGGGCTTTCAAGCTCTATTTGGGGTTTCTGATTGCTTCATTGTGTGGCAGAAGGCAGCAGAGTTTGAGATCAGGCTGTTTGTGTGGTGTCTGTCAGTTCAGTTAGCTGCTGAAAATGGTCGAGATTTGAGGACGACGAAGTTATGTGAGTTATCTGATTTGAGGCTCTTTCGGTTGTCTAGCTACTGA

Coding sequence (CDS)

ATGGAATTGAAGTGGGTATTGTTTTGTTCATCAAGTGAATGGGAGTTTCTTGCTTGGGATTTCGTTCTTTGGGGCTTTCAAGCTCTATTTGGGGTTTCTGATTGCTTCATTGTGTGGCAGAAGGCAGCAGAGTTTGAGATCAGGCTGTTTGTGTGGTGTCTGTCAGTTCAGTTAGCTGCTGAAAATGGTCGAGATTTGAGGACGACGAAGTTATGTGAGTTATCTGATTTGAGGCTCTTTCGGTTGTCTAGCTACTGA

Protein sequence

MELKWVLFCSSSEWEFLAWDFVLWGFQALFGVSDCFIVWQKAAEFEIRLFVWCLSVQLAAENGRDLRTTKLCELSDLRLFRLSSY*
Homology
[Close]
BLAST of CSPI02G07380 vs. ExPASy TrEMBL
Match: A0A0A0LH52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G075390 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.0e-41
Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0 

Query: 1  MELKWVLFCSSSEWEFLAWDFVLWGFQALFGVSDCFIVWQKAAEFEIRLFVWCLSVQLAA 60
          MELKWVL CSSSEWEFLAWDFVLWGFQALFGVSDCFIVWQKAAEFEIRLFVWCLSVQLAA
Sbjct: 1  MELKWVLLCSSSEWEFLAWDFVLWGFQALFGVSDCFIVWQKAAEFEIRLFVWCLSVQLAA 60

Query: 61 ENGRDLRTTKLCELSDLRLFRLSSY 86
          ENGRDLRTTKLCELSDLRLFRLSSY
Sbjct: 61 ENGRDLRTTKLCELSDLRLFRLSSY 85

[Close]
BLAST of CSPI02G07380 vs. ExPASy TrEMBL
Match: A0A5A7U2B7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00990 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 50/54 (92.59%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 32 VSDCFIVWQKAAEFEIRLFVWCLSVQLAAENGRDLRTTKLCELSDLRLFRLSSY 86
          VSDCF VWQKAAEFEIRLFVWCLSV LAAENGRDLRTTKLCEL DL LFRLSSY
Sbjct: 13 VSDCFTVWQKAAEFEIRLFVWCLSVHLAAENGRDLRTTKLCELPDLGLFRLSSY 66

[Close]
BLAST of CSPI02G07380 vs. NCBI nr
Match: KAE8651716.1 (hypothetical protein Csa_006031 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 3.4e-23
Identity = 57/60 (95.00%), Postives = 57/60 (95.00%), Query Frame = 0 

Query: 26 FQALFGVSDCFIVWQKAAEFEIRLFVWCLSVQLAAENGRDLRTTKLCELSDLRLFRLSSY 85
          F   FGVSDCFIVWQKAAEFEIRLFVWCLSVQLAAENGRDLRTTKLCELSDLRLFRLSSY
Sbjct: 9  FFCRFGVSDCFIVWQKAAEFEIRLFVWCLSVQLAAENGRDLRTTKLCELSDLRLFRLSSY 68

[Close]
BLAST of CSPI02G07380 vs. NCBI nr
Match: KAA0049952.1 (hypothetical protein E6C27_scaffold13G001160 [Cucumis melo var. makuwa] >TYK07684.1 hypothetical protein E5676_scaffold105G00990 [Cucumis melo var. makuwa])

HSP 1 Score: 105.1 bits (261), Expect = 3.0e-19
Identity = 50/54 (92.59%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 32 VSDCFIVWQKAAEFEIRLFVWCLSVQLAAENGRDLRTTKLCELSDLRLFRLSSY 86
          VSDCF VWQKAAEFEIRLFVWCLSV LAAENGRDLRTTKLCEL DL LFRLSSY
Sbjct: 13 VSDCFTVWQKAAEFEIRLFVWCLSVHLAAENGRDLRTTKLCELPDLGLFRLSSY 66

The following BLAST results are available for this feature:
BLAST of CSPI02G07380 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G07380 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH521.0e-4198.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G075390 PE=4 SV=1[more]
A0A5A7U2B71.4e-1992.59Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CSPI02G07380 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8651716.13.4e-2395.00hypothetical protein Csa_006031 [Cucumis sativus][more]
KAA0049952.13.0e-1992.59hypothetical protein E6C27_scaffold13G001160 [Cucumis melo var. makuwa] >TYK0768... [more]
BLAST of CSPI02G07380 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G07380.1CSPI02G07380.1mRNA