CSPI02G07250 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G07250
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Auxin efflux carrier component
Location	Chr2: 6083899 .. 6084698 (+)
RNA-Seq Expression	CSPI02G07250
Synteny	CSPI02G07250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTACAGTGTTGCAAAGATGCGTATTAATGTTATCAGACACAGGCCAAGCTCTCTCCATGTTCACCTTAGGCATTTTCATGGCAACACAACCAAACATCATTGCTTGTTCGCTGTCCGAAGCTGCCTCCGCCATGCTTGTTCGGTTCCTCGTTAGTCCCATGCTCATAGCTGCCATTTCCAAACTCATCAACCTTCGTGGGATTGCATTGCATACCGCTATTATTCAGGTTTTACTTGGCTCTCTAAACTCTTCCATGTTAATTTATATTGTTTGAATTAGCTAAAGTGATTGAAAATGATACATTAAAAGGATACAAACCATTCTAATTTTATTTTAAGATGGTAGATGTGAAAATGCCATGGAGATTAAAAAAAAAGTACAAAAGTAATTCAACGTTAAAAACATATATACTTTCGATCAAGAAGTCAAATATTTCTAGATTACCTTATCTTCGCCAATTATATTATAATTACAATTTATATTAATAAAGGAGATTAAAATTAGAAAAAAAGTAAAACTCCTCCAAACATTTACAAATATAATAAAAAATTTAATCAGTATATATTCTTAATAGGTTTTATAAGTTTGTTATATTATTGGTAAACATCTTGATTTTTTTTGTAATATTATCCATTAATGGCTCTTTTTTTAATCAATGATTCTCATTTTGTTTTTTATTTTCTTAATTTTGAACTTGAATTTATGATGTGTTAGGCTGCTTTTCCTCAAGGAGTTGTTTCATTTGTATTGGCTAAGGAATACAATGTTCATCCAAACGTACTAAGTACTTCGTAA

mRNA sequence

ATGCCTACAGTGTTGCAAAGATGCGTATTAATGTTATCAGACACAGGCCAAGCTCTCTCCATGTTCACCTTAGGCATTTTCATGGCAACACAACCAAACATCATTGCTTGTTCGCTGTCCGAAGCTGCCTCCGCCATGCTTGTTCGGTTCCTCGTTAGTCCCATGCTCATAGCTGCCATTTCCAAACTCATCAACCTTCGTGGGATTGCATTGCATACCGCTATTATTCAGGCTGCTTTTCCTCAAGGAGTTGTTTCATTTGTATTGGCTAAGGAATACAATGTTCATCCAAACGTACTAAGTACTTCGTAA

Coding sequence (CDS)

ATGCCTACAGTGTTGCAAAGATGCGTATTAATGTTATCAGACACAGGCCAAGCTCTCTCCATGTTCACCTTAGGCATTTTCATGGCAACACAACCAAACATCATTGCTTGTTCGCTGTCCGAAGCTGCCTCCGCCATGCTTGTTCGGTTCCTCGTTAGTCCCATGCTCATAGCTGCCATTTCCAAACTCATCAACCTTCGTGGGATTGCATTGCATACCGCTATTATTCAGGCTGCTTTTCCTCAAGGAGTTGTTTCATTTGTATTGGCTAAGGAATACAATGTTCATCCAAACGTACTAAGTACTTCGTAA

Protein sequence

MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAISKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS*

Homology

[Close]

BLAST of CSPI02G07250 vs. ExPASy Swiss-Prot
Match: P0C0X5 (Probable auxin efflux carrier component 1b OS=Oryza sativa subsp. japonica OX=39947 GN=PIN1B PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.4e-27
Identity = 61/103 (59.22%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MP ++ R + +LSD G  ++MF+LG+FMA QP IIAC  S A+ AM VRFLV P ++AA 
Sbjct: 431 MPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGNSLASYAMAVRFLVGPAVMAAA 490

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S  + LRG+ LH AI+QAA PQG+V FV AKEYNVHPN+LST+
Sbjct: 491 SIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPNILSTA 533

[Close]

BLAST of CSPI02G07250 vs. ExPASy Swiss-Prot
Match: Q0IQA5 (Probable auxin efflux carrier component 1d OS=Oryza sativa subsp. japonica OX=39947 GN=PIN1D PE=2 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 6.4e-27
Identity = 61/103 (59.22%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MP ++ R + +LSD G  ++MF+LG+FMA QP IIAC  S A+ AM VRFLV P ++AA 
Sbjct: 435 MPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGNSLASYAMAVRFLVGPAVMAAA 494

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S  + LRG+ LH AI+QAA PQG+V FV AKEYNVHPN+LST+
Sbjct: 495 SIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPNILSTA 537

[Close]

BLAST of CSPI02G07250 vs. ExPASy Swiss-Prot
Match: Q9LU77 (Auxin efflux carrier component 2 OS=Arabidopsis thaliana OX=3702 GN=PIN2 PE=1 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 2.0e-25
Identity = 60/103 (58.25%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MPT++   + +LSD G  ++MF+LG+FMA QP IIAC  S A  AM VRFL  P +IAA 
Sbjct: 524 MPTIMSGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAGFAMAVRFLTGPAVIAAT 583

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S  I +RG  LH AI+QAA PQG+V FV AKEYNVHP++LST+
Sbjct: 584 SIAIGIRGDLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTA 626

[Close]

BLAST of CSPI02G07250 vs. ExPASy Swiss-Prot
Match: Q5VP70 (Auxin efflux carrier component 3a OS=Oryza sativa subsp. japonica OX=39947 GN=PIN3A PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.5e-25
Identity = 58/103 (56.31%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MP ++++ + +LSD G  ++MF+LG+FMA QP+IIAC  S A  +M VRFL  P ++AA 
Sbjct: 495 MPAIVEKSISILSDAGLGMAMFSLGLFMALQPSIIACGKSAAVVSMAVRFLAGPAVMAAA 554

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S  I LRG  LH AI+QAA PQG+V FV AKEYNVHP +LST+
Sbjct: 555 SIAIGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTA 597

[Close]

BLAST of CSPI02G07250 vs. ExPASy Swiss-Prot
Match: Q651V6 (Auxin efflux carrier component 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PIN2 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-24
Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MP++++  + +LSD G  ++MF+LG+FMA QP II+C  + A  AM VRFL  P +IAA 
Sbjct: 507 MPSIIKGSISILSDAGLGMAMFSLGLFMALQPKIISCGKTVATFAMAVRFLTGPAVIAAT 566

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S  I LRG+ LH AI+QAA PQG+V FV AKEYN HP +LST+
Sbjct: 567 SIAIGLRGVLLHVAIVQAALPQGIVPFVFAKEYNCHPQILSTA 609

[Close]

BLAST of CSPI02G07250 vs. ExPASy TrEMBL
Match: A0A0A0LMR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G074270 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.4e-45
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI
Sbjct: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS
Sbjct: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 103

[Close]

BLAST of CSPI02G07250 vs. ExPASy TrEMBL
Match: A0A6J1KEF2 (Auxin efflux carrier component OS=Cucurbita maxima OX=3661 GN=LOC111492489 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.0e-36
Identity = 83/103 (80.58%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MPTVLQRCVLM +DTGQAL+MF+LGIFMA QP II CS+S+ A AMLVRFL+SPML AA 
Sbjct: 300 MPTVLQRCVLMFADTGQALAMFSLGIFMAAQPTIIDCSMSQVAIAMLVRFLISPMLSAAT 359

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           SKL+ LRGI LHTAIIQAAFPQGVVSFVLAK+YNV+PNV+STS
Sbjct: 360 SKLVGLRGIILHTAIIQAAFPQGVVSFVLAKQYNVYPNVMSTS 402

[Close]

BLAST of CSPI02G07250 vs. ExPASy TrEMBL
Match: A0A6J1EV74 (Auxin efflux carrier component OS=Cucurbita moschata OX=3662 GN=LOC111436245 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.0e-36
Identity = 83/103 (80.58%), Postives = 92/103 (89.32%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MPTVLQRCVLM +DTGQAL+MF+LGIFMA QP II CS+SE A AMLVRFL+SPML AA 
Sbjct: 300 MPTVLQRCVLMFADTGQALAMFSLGIFMAAQPTIIDCSMSEVAIAMLVRFLISPMLSAAT 359

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           SKL+ LRGI LHTAIIQAAFPQGVVSFV AK+YNV+PNV+STS
Sbjct: 360 SKLVGLRGIVLHTAIIQAAFPQGVVSFVFAKQYNVYPNVMSTS 402

[Close]

BLAST of CSPI02G07250 vs. ExPASy TrEMBL
Match: A0A6J1D9A5 (probable auxin efflux carrier component 1b OS=Momordica charantia OX=3673 GN=LOC111018214 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.7e-35
Identity = 80/103 (77.67%), Postives = 92/103 (89.32%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MPT++ +C+ MLSDTG ALSMF+LG FMA QPNIIACS+S+AA+AM  RFL+SPML+AAI
Sbjct: 39  MPTLMHKCISMLSDTGLALSMFSLGTFMAVQPNIIACSMSQAATAMAARFLISPMLVAAI 98

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S L+ L GI LHTAIIQAAFPQGV+SFVLAKEYNVHPNVLSTS
Sbjct: 99  SMLVGLHGIVLHTAIIQAAFPQGVLSFVLAKEYNVHPNVLSTS 141

[Close]

BLAST of CSPI02G07250 vs. ExPASy TrEMBL
Match: A0A5A7U1Y8 (Putative auxin efflux carrier component 1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00300 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 8.1e-33
Identity = 80/83 (96.39%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 21  MFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAISKLINLRGIALHTAIIQAAF 80
           MFTLGIFMA QPNIIACS+SEAASAMLVRFLVSPMLIAAISKLINL GIALHTAIIQAAF
Sbjct: 1   MFTLGIFMAAQPNIIACSMSEAASAMLVRFLVSPMLIAAISKLINLHGIALHTAIIQAAF 60

Query: 81  PQGVVSFVLAKEYNVHPNVLSTS 104
           PQGVVSFVLAKEYNVHPNVLSTS
Sbjct: 61  PQGVVSFVLAKEYNVHPNVLSTS 83

[Close]

BLAST of CSPI02G07250 vs. NCBI nr
Match: KAE8651711.1 (hypothetical protein Csa_006143 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 5.0e-45
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI
Sbjct: 294 MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 353

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS
Sbjct: 354 SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 396

[Close]

BLAST of CSPI02G07250 vs. NCBI nr
Match: XP_011648997.2 (probable auxin efflux carrier component 1d [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 5.0e-45
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI
Sbjct: 294 MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 353

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS
Sbjct: 354 SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 396

[Close]

BLAST of CSPI02G07250 vs. NCBI nr
Match: XP_038889292.1 (auxin efflux carrier component 2-like [Benincasa hispida])

HSP 1 Score: 178.3 bits (451), Expect = 3.3e-41
Identity = 93/103 (90.29%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MPT+LQRCVLMLSDTGQALSMF+LGIFMA QPNII+CS+SEAASAMLVRFL+SP+LIAAI
Sbjct: 296 MPTLLQRCVLMLSDTGQALSMFSLGIFMAAQPNIISCSMSEAASAMLVRFLLSPILIAAI 355

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           +KL+NL GIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS
Sbjct: 356 TKLVNLHGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 398

[Close]

BLAST of CSPI02G07250 vs. NCBI nr
Match: XP_038889293.1 (probable auxin efflux carrier component 1b [Benincasa hispida])

HSP 1 Score: 164.9 bits (416), Expect = 3.8e-37
Identity = 83/103 (80.58%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           +PT+LQRCVLM SDTGQAL++F+LGIFMA QPNIIACS+ E ASAMLVRFLVSPML+AAI
Sbjct: 274 LPTLLQRCVLMFSDTGQALALFSLGIFMAAQPNIIACSILEIASAMLVRFLVSPMLVAAI 333

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           SKL++L GIAL+TAI+QAAFP G+VSFVLAKEYNVHPN++STS
Sbjct: 334 SKLVDLHGIALYTAILQAAFPPGIVSFVLAKEYNVHPNIISTS 376

[Close]

BLAST of CSPI02G07250 vs. NCBI nr
Match: XP_022929755.1 (auxin efflux carrier component 2-like [Cucurbita moschata])

HSP 1 Score: 159.8 bits (403), Expect = 1.2e-35
Identity = 83/103 (80.58%), Postives = 92/103 (89.32%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MPTVLQRCVLM +DTGQAL+MF+LGIFMA QP II CS+SE A AMLVRFL+SPML AA 
Sbjct: 300 MPTVLQRCVLMFADTGQALAMFSLGIFMAAQPTIIDCSMSEVAIAMLVRFLISPMLSAAT 359

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           SKL+ LRGI LHTAIIQAAFPQGVVSFV AK+YNV+PNV+STS
Sbjct: 360 SKLVGLRGIVLHTAIIQAAFPQGVVSFVFAKQYNVYPNVMSTS 402

[Close]

BLAST of CSPI02G07250 vs. TAIR 10
Match: AT5G57090.1 (Auxin efflux carrier family protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-26
Identity = 60/103 (58.25%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MPT++   + +LSD G  ++MF+LG+FMA QP IIAC  S A  AM VRFL  P +IAA 
Sbjct: 524 MPTIMSGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAGFAMAVRFLTGPAVIAAT 583

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S  I +RG  LH AI+QAA PQG+V FV AKEYNVHP++LST+
Sbjct: 584 SIAIGIRGDLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTA 626

[Close]

BLAST of CSPI02G07250 vs. TAIR 10
Match: AT1G73590.1 (Auxin efflux carrier family protein )

HSP 1 Score: 109.0 bits (271), Expect = 2.3e-24
Identity = 54/103 (52.43%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MP ++ + + +LSD G  ++MF+LG+FMA  P IIAC    AA A  +RF+V P ++   
Sbjct: 499 MPALIAKSISILSDAGLGMAMFSLGLFMALNPRIIACGNRRAAFAAAMRFVVGPAVMLVA 558

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLSTS 104
           S  + LRG+ LH AIIQAA PQG+V FV AKEYNVHP++LST+
Sbjct: 559 SYAVGLRGVLLHVAIIQAALPQGIVPFVFAKEYNVHPDILSTA 601

[Close]

BLAST of CSPI02G07250 vs. TAIR 10
Match: AT1G70940.1 (Auxin efflux carrier family protein )

HSP 1 Score: 108.2 bits (269), Expect = 4.0e-24
Identity = 56/102 (54.90%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MP ++Q+ + +LSD G  ++MF+LG+FMA QP +IAC  S A  AM VRFL  P ++A  
Sbjct: 517 MPKIIQQSISILSDAGLGMAMFSLGLFMALQPKLIACGNSVATFAMAVRFLTGPAVMAVA 576

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLST 103
           +  I LRG  L  AI+QAA PQG+V FV AKEYNVHP +LST
Sbjct: 577 AIAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILST 618

[Close]

BLAST of CSPI02G07250 vs. TAIR 10
Match: AT1G23080.1 (Auxin efflux carrier family protein )

HSP 1 Score: 107.8 bits (268), Expect = 5.2e-24
Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MP ++Q+ + +LSD G  ++MF+LG+FMA QP +IAC  S A  AM VRF   P ++A  
Sbjct: 496 MPKIIQQSISILSDAGLGMAMFSLGLFMALQPKLIACGNSTATFAMAVRFFTGPAVMAVA 555

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLST 103
           +  I LRG  L  AI+QAA PQG+V FV AKEYNVHP +LST
Sbjct: 556 AMAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILST 597

[Close]

BLAST of CSPI02G07250 vs. TAIR 10
Match: AT1G23080.3 (Auxin efflux carrier family protein )

HSP 1 Score: 107.8 bits (268), Expect = 5.2e-24
Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 1   MPTVLQRCVLMLSDTGQALSMFTLGIFMATQPNIIACSLSEAASAMLVRFLVSPMLIAAI 60
           MP ++Q+ + +LSD G  ++MF+LG+FMA QP +IAC  S A  AM VRF   P ++A  
Sbjct: 492 MPKIIQQSISILSDAGLGMAMFSLGLFMALQPKLIACGNSTATFAMAVRFFTGPAVMAVA 551

Query: 61  SKLINLRGIALHTAIIQAAFPQGVVSFVLAKEYNVHPNVLST 103
           +  I LRG  L  AI+QAA PQG+V FV AKEYNVHP +LST
Sbjct: 552 AMAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILST 593

The following BLAST results are available for this feature:

BLAST of CSPI02G07250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C0X5	6.4e-27	59.22	Probable auxin efflux carrier component 1b OS=Oryza sativa subsp. japonica OX=39...	[more]
Q0IQA5	6.4e-27	59.22	Probable auxin efflux carrier component 1d OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9LU77	2.0e-25	58.25	Auxin efflux carrier component 2 OS=Arabidopsis thaliana OX=3702 GN=PIN2 PE=1 SV...	[more]
Q5VP70	3.5e-25	56.31	Auxin efflux carrier component 3a OS=Oryza sativa subsp. japonica OX=39947 GN=PI...	[more]
Q651V6	1.0e-24	55.34	Auxin efflux carrier component 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PIN...	[more]

BLAST of CSPI02G07250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMR0	2.4e-45	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G074270 PE=4 SV=1	[more]
A0A6J1KEF2	6.0e-36	80.58	Auxin efflux carrier component OS=Cucurbita maxima OX=3661 GN=LOC111492489 PE=3 ...	[more]
A0A6J1EV74	6.0e-36	80.58	Auxin efflux carrier component OS=Cucurbita moschata OX=3662 GN=LOC111436245 PE=...	[more]
A0A6J1D9A5	1.7e-35	77.67	probable auxin efflux carrier component 1b OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5A7U1Y8	8.1e-33	96.39	Putative auxin efflux carrier component 1b OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of CSPI02G07250 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651711.1	5.0e-45	100.00	hypothetical protein Csa_006143 [Cucumis sativus]	[more]
XP_011648997.2	5.0e-45	100.00	probable auxin efflux carrier component 1d [Cucumis sativus]	[more]
XP_038889292.1	3.3e-41	90.29	auxin efflux carrier component 2-like [Benincasa hispida]	[more]
XP_038889293.1	3.8e-37	80.58	probable auxin efflux carrier component 1b [Benincasa hispida]	[more]
XP_022929755.1	1.2e-35	80.58	auxin efflux carrier component 2-like [Cucurbita moschata]	[more]

BLAST of CSPI02G07250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57090.1	1.5e-26	58.25	Auxin efflux carrier family protein	[more]
AT1G73590.1	2.3e-24	52.43	Auxin efflux carrier family protein	[more]
AT1G70940.1	4.0e-24	54.90	Auxin efflux carrier family protein	[more]
AT1G23080.1	5.2e-24	53.92	Auxin efflux carrier family protein	[more]
AT1G23080.3	5.2e-24	53.92	Auxin efflux carrier family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004776	Membrane transport protein	PFAM	PF03547	Mem_trans	coord: 1..102 e-value: 1.1E-30 score: 106.3
None	No IPR available	PANTHER	PTHR31752	AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED	coord: 1..103
IPR033526	Auxin efflux carrier component 2	PANTHER	PTHR31752:SF4	AUXIN EFFLUX CARRIER COMPONENT 2	coord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G07250.1	CSPI02G07250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010315	auxin efflux
biological_process	GO:0010252	auxin homeostasis
biological_process	GO:0009926	auxin polar transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0010329	auxin efflux transmembrane transporter activity