CSPI02G06890 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G06890
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	LOB domain-containing protein
Location	Chr2: 5693646 .. 5694349 (+)
RNA-Seq Expression	CSPI02G06890
Synteny	CSPI02G06890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGAATTGGAAGATGGCTTCGAGTTCCTCGAATTCGCCCTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGCCAGCCGGAATGTGTTTTTGCGCCGTATTTTCCACCGGATCAGCCTCAGAAATTCGCAAATGTTCACAAGGTATTCGGAGCTAGTAATGTAACAAAACTTCTCAACGAATTACATCCTCACCAGAGAGAAGACGCTGTCAATTCCCTCGCTTACGAAGCCGATATGCGCCTTCGTGACCCTGTCTACGGCTGTGTTGGCGTAATTTCTCTGCTTCAACACCAACTCTGTAAACTCCAAATGGATCTCACTTGCGCAAAATCTGAACTCTCCAAATATCAAAACCTAGGGATTGGTAACCACGCTACCCTGATTTCGCCGCCTTCCACCCTTTCTACCGTCCCTCATGGACAGAGAAACCACCAGCCGGCGTTCAATTTCGCTCGAGATCAACCGCATAGTCTTTATCACGACCAATTTTTCCCTCGAGATCAACAACAACCACAGATGATGCTACGACGGAACTTCGACGGCGGTAGCAACTACGACGGACTTTTGGCCGTTAATGTCACCGCAAGTATCGGTAACCTCAGCCACCAGTTCCAGCAAACTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAGGGTTTCGTTTTGTTTCTCTTTTTCTCTTTTTTTC

mRNA sequence

GAGGAATTGGAAGATGGCTTCGAGTTCCTCGAATTCGCCCTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGCCAGCCGGAATGTGTTTTTGCGCCGTATTTTCCACCGGATCAGCCTCAGAAATTCGCAAATGTTCACAAGGTATTCGGAGCTAGTAATGTAACAAAACTTCTCAACGAATTACATCCTCACCAGAGAGAAGACGCTGTCAATTCCCTCGCTTACGAAGCCGATATGCGCCTTCGTGACCCTGTCTACGGCTGTGTTGGCGTAATTTCTCTGCTTCAACACCAACTCTGTAAACTCCAAATGGATCTCACTTGCGCAAAATCTGAACTCTCCAAATATCAAAACCTAGGGATTGGTAACCACGCTACCCTGATTTCGCCGCCTTCCACCCTTTCTACCGTCCCTCATGGACAGAGAAACCACCAGCCGGCGTTCAATTTCGCTCGAGATCAACCGCATAGTCTTTATCACGACCAATTTTTCCCTCGAGATCAACAACAACCACAGATGATGCTACGACGGAACTTCGACGGCGGTAGCAACTACGACGGACTTTTGGCCGTTAATGTCACCGCAAGTATCGGTAACCTCAGCCACCAGTTCCAGCAAACTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAGGGTTTCGTTTTGTTTCTCTTTTTCTCTTTTTTTC

Coding sequence (CDS)

ATGGCTTCGAGTTCCTCGAATTCGCCCTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGCCAGCCGGAATGTGTTTTTGCGCCGTATTTTCCACCGGATCAGCCTCAGAAATTCGCAAATGTTCACAAGGTATTCGGAGCTAGTAATGTAACAAAACTTCTCAACGAATTACATCCTCACCAGAGAGAAGACGCTGTCAATTCCCTCGCTTACGAAGCCGATATGCGCCTTCGTGACCCTGTCTACGGCTGTGTTGGCGTAATTTCTCTGCTTCAACACCAACTCTGTAAACTCCAAATGGATCTCACTTGCGCAAAATCTGAACTCTCCAAATATCAAAACCTAGGGATTGGTAACCACGCTACCCTGATTTCGCCGCCTTCCACCCTTTCTACCGTCCCTCATGGACAGAGAAACCACCAGCCGGCGTTCAATTTCGCTCGAGATCAACCGCATAGTCTTTATCACGACCAATTTTTCCCTCGAGATCAACAACAACCACAGATGATGCTACGACGGAACTTCGACGGCGGTAGCAACTACGACGGACTTTTGGCCGTTAATGTCACCGCAAGTATCGGTAACCTCAGCCACCAGTTCCAGCAAACTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAG

Protein sequence

MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS*

Homology

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BLAST of CSPI02G06890 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-67
Identity = 147/220 (66.82%), Postives = 163/220 (74.09%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSS+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 121 NHATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGG 180
            H +L    + L+    G           RD  H   H QFFPR+    QM    +   G
Sbjct: 121 THQSL--GINLLAGAADG------TATAVRDHYH---HHQFFPRE----QMFGGLDVPAG 180

Query: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           +NYDG +      +IG ++ QFQQ RAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

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BLAST of CSPI02G06890 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.7e-50
Identity = 108/187 (57.75%), Postives = 125/187 (66.84%), Query Frame = 0


Query: 2   ASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           A   + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP Q
Sbjct: 26  AVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQ 85

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHA 121
           REDAVNSLAYEADMRLRDPVYGCVGVIS+LQH L +LQ DL  AK ELSKYQ     + +
Sbjct: 86  REDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASAS 145

Query: 122 TLISPPSTL-----STVPHGQRN-----HQPAFNFARDQPHSLYHDQFFPRDQQQPQMML 179
           T  + P  +     + +P+G  N     H  A                F ++Q     ML
Sbjct: 146 TAPTGPQAMAEFIGNAMPNGAHNFINIGHSAALGSLGGSA------SVFGQEQFGNAQML 205

[Close]

BLAST of CSPI02G06890 vs. ExPASy Swiss-Prot
Match: A1YKY7 (Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 9.5e-49
Identity = 103/184 (55.98%), Postives = 123/184 (66.85%), Query Frame = 0


Query: 6   SNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDA 65
           + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF  VH+VFGASNVTKL+NE+HP QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVRVHRVFGASNVTKLMNEIHPLQREDA 89

Query: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHATLIS 125
           +NSLAYEADMR+RDPVYGCVGVIS+LQH L +LQ DL  AK ELSKYQ     + +T  +
Sbjct: 90  MNSLAYEADMRIRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPT 149

Query: 126 PPSTL-----STVPHGQRN------HQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRN 179
            P  +     S +P+G  +      H  A              + F  + Q    ML R+
Sbjct: 150 GPQAMAEFIGSAMPNGAAHNFINLGHSAALGSLGGSTAMFGQQEQFGSNAQ----MLSRS 209

[Close]

BLAST of CSPI02G06890 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.2e-48
Identity = 90/112 (80.36%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 2   ASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           A+  + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP+Q
Sbjct: 31  AACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQ 90

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQ 114
           REDAVNSLAYEADMRLRDPVYGCV +IS+LQ  L +LQ DL  AK ELSKYQ
Sbjct: 91  REDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQ 142

[Close]

BLAST of CSPI02G06890 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.2e-48
Identity = 90/112 (80.36%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 2   ASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           A+  + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP+Q
Sbjct: 31  AACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQ 90

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQ 114
           REDAVNSLAYEADMRLRDPVYGCV +IS+LQ  L +LQ DL  AK ELSKYQ
Sbjct: 91  REDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQ 142

[Close]

BLAST of CSPI02G06890 vs. ExPASy TrEMBL
Match: A0A0A0LML7 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070920 PE=3 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.2e-123
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180
           ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN
Sbjct: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180

Query: 181 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 218

[Close]

BLAST of CSPI02G06890 vs. ExPASy TrEMBL
Match: A0A1S3B5A0 (LOB domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103485916 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.3e-120
Identity = 216/220 (98.18%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD--QQQPQMMLRRNFDGG 180
           ATLISPPS LSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD  QQQ QMMLRRNFDGG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQQQMMLRRNFDGG 180

Query: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 220

[Close]

BLAST of CSPI02G06890 vs. ExPASy TrEMBL
Match: A0A5A7TVS1 (LOB domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G001440 PE=3 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.7e-120
Identity = 216/221 (97.74%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD---QQQPQMMLRRNFDG 180
           ATLISPPS LSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD   QQQ QMMLRRNFDG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQQQQMMLRRNFDG 180

Query: 181 GSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           GSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 GSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 221

[Close]

BLAST of CSPI02G06890 vs. ExPASy TrEMBL
Match: A0A6J1D6T8 (LOB domain-containing protein 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018161 PE=3 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.7e-107
Identity = 197/219 (89.95%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 17  MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 76

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 77  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 136

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180
           A LISPPS      HG R++QPAFNF RDQPHSLYHDQ FPRDQQQ QMM+R  FDGGSN
Sbjct: 137 AALISPPSAAVATAHGPRSNQPAFNFVRDQPHSLYHDQIFPRDQQQ-QMMIRSGFDGGSN 196

Query: 181 YD-GLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           YD GLLAVNVT SI NL HQFQQ RAAAG DRRGTLDHS
Sbjct: 197 YDAGLLAVNVTPSIANLGHQFQQPRAAAGVDRRGTLDHS 234

[Close]

BLAST of CSPI02G06890 vs. ExPASy TrEMBL
Match: A0A6J1D9K0 (LOB domain-containing protein 6 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018161 PE=3 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.7e-107
Identity = 197/219 (89.95%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180
           A LISPPS      HG R++QPAFNF RDQPHSLYHDQ FPRDQQQ QMM+R  FDGGSN
Sbjct: 121 AALISPPSAAVATAHGPRSNQPAFNFVRDQPHSLYHDQIFPRDQQQ-QMMIRSGFDGGSN 180

Query: 181 YD-GLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           YD GLLAVNVT SI NL HQFQQ RAAAG DRRGTLDHS
Sbjct: 181 YDAGLLAVNVTPSIANLGHQFQQPRAAAGVDRRGTLDHS 218

[Close]

BLAST of CSPI02G06890 vs. NCBI nr
Match: XP_004152887.1 (protein ASYMMETRIC LEAVES 2 [Cucumis sativus] >XP_011648980.1 protein ASYMMETRIC LEAVES 2 [Cucumis sativus] >KGN61226.1 hypothetical protein Csa_006748 [Cucumis sativus])

HSP 1 Score: 452.2 bits (1162), Expect = 2.5e-123
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180
           ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN
Sbjct: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180

Query: 181 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 218

[Close]

BLAST of CSPI02G06890 vs. NCBI nr
Match: XP_008441920.1 (PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441921.1 PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441922.1 PREDICTED: LOB domain-containing protein 6 [Cucumis melo])

HSP 1 Score: 442.2 bits (1136), Expect = 2.6e-120
Identity = 216/220 (98.18%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD--QQQPQMMLRRNFDGG 180
           ATLISPPS LSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD  QQQ QMMLRRNFDGG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQQQMMLRRNFDGG 180

Query: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 220

[Close]

BLAST of CSPI02G06890 vs. NCBI nr
Match: KAA0047653.1 (LOB domain-containing protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 441.8 bits (1135), Expect = 3.4e-120
Identity = 216/221 (97.74%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD---QQQPQMMLRRNFDG 180
           ATLISPPS LSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRD   QQQ QMMLRRNFDG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQQQQMMLRRNFDG 180

Query: 181 GSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           GSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS
Sbjct: 181 GSNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 221

[Close]

BLAST of CSPI02G06890 vs. NCBI nr
Match: XP_038889589.1 (protein ASYMMETRIC LEAVES 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 432.6 bits (1111), Expect = 2.1e-117
Identity = 209/218 (95.87%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 16  MASSSSNSPCAACKFLRRKCQLECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 75

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 76  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 135

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180
           A LISPPS +STV HGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQ QMMLRR+FDGGSN
Sbjct: 136 AALISPPSAVSTVAHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQMMLRRSFDGGSN 195

Query: 181 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           YDGLL+VNVTASIGNLSHQFQQ+RAAAGDDRRGTLDHS
Sbjct: 196 YDGLLSVNVTASIGNLSHQFQQSRAAAGDDRRGTLDHS 233

[Close]

BLAST of CSPI02G06890 vs. NCBI nr
Match: XP_038889590.1 (protein ASYMMETRIC LEAVES 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 432.6 bits (1111), Expect = 2.1e-117
Identity = 209/218 (95.87%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSSSNSPCAACKFLRRKCQ ECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQLECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGGSN 180
           A LISPPS +STV HGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQ QMMLRR+FDGGSN
Sbjct: 121 AALISPPSAVSTVAHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQMMLRRSFDGGSN 180

Query: 181 YDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           YDGLL+VNVTASIGNLSHQFQQ+RAAAGDDRRGTLDHS
Sbjct: 181 YDGLLSVNVTASIGNLSHQFQQSRAAAGDDRRGTLDHS 218

[Close]

BLAST of CSPI02G06890 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 257.7 bits (657), Expect = 8.5e-69
Identity = 147/220 (66.82%), Postives = 163/220 (74.09%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSS+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 121 NHATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGG 180
            H +L    + L+    G           RD  H   H QFFPR+    QM    +   G
Sbjct: 121 THQSL--GINLLAGAADG------TATAVRDHYH---HHQFFPRE----QMFGGLDVPAG 180

Query: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           +NYDG +      +IG ++ QFQQ RAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

[Close]

BLAST of CSPI02G06890 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 257.7 bits (657), Expect = 8.5e-69
Identity = 147/220 (66.82%), Postives = 163/220 (74.09%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSS+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 121 NHATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGG 180
            H +L    + L+    G           RD  H   H QFFPR+    QM    +   G
Sbjct: 121 THQSL--GINLLAGAADG------TATAVRDHYH---HHQFFPRE----QMFGGLDVPAG 180

Query: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           +NYDG +      +IG ++ QFQQ RAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

[Close]

BLAST of CSPI02G06890 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 257.7 bits (657), Expect = 8.5e-69
Identity = 147/220 (66.82%), Postives = 163/220 (74.09%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSS+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 121 NHATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGG 180
            H +L    + L+    G           RD  H   H QFFPR+    QM    +   G
Sbjct: 121 THQSL--GINLLAGAADG------TATAVRDHYH---HHQFFPRE----QMFGGLDVPAG 180

Query: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           +NYDG +      +IG ++ QFQQ RAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

[Close]

BLAST of CSPI02G06890 vs. TAIR 10
Match: AT1G65620.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 257.7 bits (657), Expect = 8.5e-69
Identity = 147/220 (66.82%), Postives = 163/220 (74.09%), Query Frame = 0


Query: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASSS+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGI--G 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+CAKSELSKYQ+LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAA 120

Query: 121 NHATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQMMLRRNFDGG 180
            H +L    + L+    G           RD  H   H QFFPR+    QM    +   G
Sbjct: 121 THQSL--GINLLAGAADG------TATAVRDHYH---HHQFFPRE----QMFGGLDVPAG 180

Query: 181 SNYDGLLAVNVTASIGNLSHQFQQTRAAAGDDRRGTLDHS 219
           +NYDG +      +IG ++ QFQQ RAAAGDD R T+D S
Sbjct: 181 NNYDGGI-----LAIGQIT-QFQQPRAAAGDDGRRTVDPS 199

[Close]

BLAST of CSPI02G06890 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 179.5 bits (454), Expect = 2.9e-45
Identity = 85/114 (74.56%), Postives = 98/114 (85.96%), Query Frame = 0


Query: 1   MASSSS--NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELH 60
           MASSS+  NSPCAACKFLRRKC P C+FAPYFPP++P KFANVHK+FGASNVTKLLNEL 
Sbjct: 1   MASSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELL 60

Query: 61  PHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKY 113
           PHQREDAVNSLAYEA+ R+RDPVYGCVG IS LQ Q+ +LQ +L  A ++L+ Y
Sbjct: 61  PHQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHY 114

The following BLAST results are available for this feature:

BLAST of CSPI02G06890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04479	1.2e-67	66.82	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q32SG3	1.7e-50	57.75	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]
A1YKY7	9.5e-49	55.98	Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1	[more]
A2WXT0	6.2e-48	80.36	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
Q8LQH4	6.2e-48	80.36	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]

BLAST of CSPI02G06890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LML7	1.2e-123	100.00	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070920 PE=3 SV...	[more]
A0A1S3B5A0	1.3e-120	98.18	LOB domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103485916 PE=3 SV=...	[more]
A0A5A7TVS1	1.7e-120	97.74	LOB domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A6J1D6T8	2.7e-107	89.95	LOB domain-containing protein 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1D9K0	2.7e-107	89.95	LOB domain-containing protein 6 isoform X2 OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of CSPI02G06890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152887.1	2.5e-123	100.00	protein ASYMMETRIC LEAVES 2 [Cucumis sativus] >XP_011648980.1 protein ASYMMETRIC...	[more]
XP_008441920.1	2.6e-120	98.18	PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441921.1 PREDIC...	[more]
KAA0047653.1	3.4e-120	97.74	LOB domain-containing protein 6 [Cucumis melo var. makuwa]	[more]
XP_038889589.1	2.1e-117	95.87	protein ASYMMETRIC LEAVES 2 isoform X1 [Benincasa hispida]	[more]
XP_038889590.1	2.1e-117	95.87	protein ASYMMETRIC LEAVES 2 isoform X2 [Benincasa hispida]	[more]

BLAST of CSPI02G06890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65620.1	8.5e-69	66.82	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.2	8.5e-69	66.82	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.3	8.5e-69	66.82	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.4	8.5e-69	66.82	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.2	2.9e-45	74.56	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 9..106 e-value: 4.1E-43 score: 146.0
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 8..109 score: 27.115797
None	No IPR available	PANTHER	PTHR31301:SF76	LOB DOMAIN-CONTAINING PROTEIN 6-LIKE	coord: 3..183
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 3..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G06890.1	CSPI02G06890.1	mRNA