CSPI02G06500 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G06500
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DUF4283 domain-containing protein
Location	Chr2: 5171797 .. 5172165 (+)
RNA-Seq Expression	CSPI02G06500
Synteny	CSPI02G06500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAGTCATGTTTACTTTGATCAACACCCCAAAGAACAACAGATTCTTTCAGAAAAAAAGAGATAACAGACAATGTATGTGGATTAGTAAAACGCAAAATAAGAAAGGGAACTTAGCTGAGATCTTCAAGGTGGACGACAAAGGAAGAAAAGGCTATAAATTGGTGCAAGAAAGTGTTGAAAAAACAGGATGGAGCGATTTTTTAAAAATGCTAAACTACAAGGCTGAAAGAGAAACGAAAGCATTGCATGCAGGGTACCATAGTCGCAAGTTTGAAGTGGACACATCATCAGCAGAATCGGATACAGATGAAAGGAATAAAAAAAGAACATATGCAGAAGTGTTATATTCCGAAAGTAACTAG

mRNA sequence

ATGAAGAAAGTCATGTTTACTTTGATCAACACCCCAAAGAACAACAGATTCTTTCAGAAAAAAAGAGATAACAGACAATGTATGTGGATTAGTAAAACGCAAAATAAGAAAGGGAACTTAGCTGAGATCTTCAAGGTGGACGACAAAGGAAGAAAAGGCTATAAATTGGTGCAAGAAAGTGTTGAAAAAACAGGATGGAGCGATTTTTTAAAAATGCTAAACTACAAGGCTGAAAGAGAAACGAAAGCATTGCATGCAGGGTACCATAGTCGCAAGTTTGAAGTGGACACATCATCAGCAGAATCGGATACAGATGAAAGGAATAAAAAAAGAACATATGCAGAAGTGTTATATTCCGAAAGTAACTAG

Coding sequence (CDS)

ATGAAGAAAGTCATGTTTACTTTGATCAACACCCCAAAGAACAACAGATTCTTTCAGAAAAAAAGAGATAACAGACAATGTATGTGGATTAGTAAAACGCAAAATAAGAAAGGGAACTTAGCTGAGATCTTCAAGGTGGACGACAAAGGAAGAAAAGGCTATAAATTGGTGCAAGAAAGTGTTGAAAAAACAGGATGGAGCGATTTTTTAAAAATGCTAAACTACAAGGCTGAAAGAGAAACGAAAGCATTGCATGCAGGGTACCATAGTCGCAAGTTTGAAGTGGACACATCATCAGCAGAATCGGATACAGATGAAAGGAATAAAAAAAGAACATATGCAGAAGTGTTATATTCCGAAAGTAACTAG

Protein sequence

MKKVMFTLINTPKNNRFFQKKRDNRQCMWISKTQNKKGNLAEIFKVDDKGRKGYKLVQESVEKTGWSDFLKMLNYKAERETKALHAGYHSRKFEVDTSSAESDTDERNKKRTYAEVLYSESN*

Homology

[Close]

BLAST of CSPI02G06500 vs. ExPASy TrEMBL
Match: A0A5A7VKI3 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00160 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 6.2e-16
Identity = 50/122 (40.98%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 1   MKKVMFTLINTPKNNRFFQKKRDNRQCMWISKTQNKKGNLAEIFKVDDKGRKGYKLVQES 60
           +K    TL++TP+  RFF KKR    C+W+ KT N+KG +AEI++VDD+GRK   LV E 
Sbjct: 24  LKSTFKTLLDTPRTTRFFLKKRFEEYCLWVQKTYNRKGYIAEIYRVDDRGRKCCILVPEG 83

Query: 61  VEKTGWSDFLKMLNYKAERETKALHAGYHSRKFEVDTSSAESDTDERNKKRTYAEVLYSE 120
            EK+GW+ F+ +L+ K +  TK  +      K +   SS+ES  D+  K+R+YA+ +   
Sbjct: 84  SEKSGWAQFVSLLHGKKDASTKENYKTLLGTKMKDRLSSSESGDDK--KRRSYAKAVIKG 143

Query: 121 SN 123
           S+
Sbjct: 144 SS 143

[Close]

BLAST of CSPI02G06500 vs. ExPASy TrEMBL
Match: A0A5D3CFS8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00330 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.0e-15
Identity = 50/122 (40.98%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 1   MKKVMFTLINTPKNNRFFQKKRDNRQCMWISKTQNKKGNLAEIFKVDDKGRKGYKLVQES 60
           +K    TL++TP+  RFF +KR    C+W+ KT N+KG +AEI++VDD+GRK   LV E 
Sbjct: 144 LKSSFRTLLDTPRTTRFFLEKRFEDYCLWVQKTYNRKGYIAEIYRVDDRGRKCCILVPEG 203

Query: 61  VEKTGWSDFLKMLNYKAERETKALHAGYHSRKFEVDTSSAESDTDERNKKRTYAEVLYSE 120
            EK+GW+ F+ +L  K +  TK  +    + K +   SS+ES  D   K+R+YAE +   
Sbjct: 204 SEKSGWAQFVSLLYGKKDSSTKTNYRTLLNTKLKDRFSSSESGDD--TKRRSYAEAVIKG 263

Query: 121 SN 123
           S+
Sbjct: 264 SS 263

[Close]

BLAST of CSPI02G06500 vs. ExPASy TrEMBL
Match: A0A5A7TFK7 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00060 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 9.0e-15
Identity = 49/122 (40.16%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 1   MKKVMFTLINTPKNNRFFQKKRDNRQCMWISKTQNKKGNLAEIFKVDDKGRKGYKLVQES 60
           +K    TL++TP+  RFF +KR    C+W+ KT N+KG +AEI++VDD+GRK   LV E 
Sbjct: 54  LKSSFRTLLDTPRTTRFFLEKRFEECCLWVQKTYNRKGYIAEIYRVDDRGRKCCILVPEG 113

Query: 61  VEKTGWSDFLKMLNYKAERETKALHAGYHSRKFEVDTSSAESDTDERNKKRTYAEVLYSE 120
            EK+GW+ F+ +L+ K +  +K  +    + K     SS  SD+ E  K+R+YAE +   
Sbjct: 114 AEKSGWAHFVSLLHGKKDPSSKTNYRTILNTKMRDGFSS--SDSGEDTKRRSYAEAVIKG 173

Query: 121 SN 123
           S+
Sbjct: 174 SS 173

[Close]

BLAST of CSPI02G06500 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.2e-13
Identity = 48/122 (39.34%), Postives = 73/122 (59.84%), Query Frame = 0


Query: 1   MKKVMFTLINTPKNNRFFQKKRDNRQCMWISKTQNKKGNLAEIFKVDDKGRKGYKLVQES 60
           +K    TL++T +  RFF +KR    C+W+ KT N+KG +AEI++VDD+GRK   LV E 
Sbjct: 92  LKSSFRTLLDTLRTTRFFLEKRFEDYCLWVQKTYNRKGYIAEIYRVDDRGRKCCILVPEG 151

Query: 61  VEKTGWSDFLKMLNYKAERETKALHAGYHSRKFEVDTSSAESDTDERNKKRTYAEVLYSE 120
            EK+GW+ F+ +L  K +   K  +    + K +   SS+ES  D   K+R+YAE +   
Sbjct: 152 SEKSGWAQFVSLLYGKKDSSKKTNYRTLLNTKLKDGFSSSESGDD--TKRRSYAEAVIKG 211

Query: 121 SN 123
           S+
Sbjct: 212 SS 211

[Close]

BLAST of CSPI02G06500 vs. ExPASy TrEMBL
Match: A0A5D3E0Y8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001820 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.9e-13
Identity = 48/125 (38.40%), Postives = 72/125 (57.60%), Query Frame = 0


Query: 1   MKKVMFTLINTPKNNRFFQKKRDNRQCMWISKTQNKKGNLAEIFKVDDKGRKGYKLVQES 60
           +K     L+NTP+  RFF +KR    C+W+    N++G +AEI++VDD+GRK   LV E 
Sbjct: 54  LKMTFKALLNTPRTTRFFVEKRYVDFCLWVQTIHNRRGYIAEIYRVDDRGRKCCILVPEG 113

Query: 61  VEKTGWSDFLKMLNYKA---ERETKALHAGYHSRKFEVDTSSAESDTDERNKKRTYAEVL 120
           ++KTGW+ F  ML  K    ++ET   H     +  E    S +S TD  + ++TYAE +
Sbjct: 114 LDKTGWALFNDMLTCKKTSDKKETPTRHYYNQDKGKEKIQQSYDSSTDSESPRKTYAEAV 173

Query: 121 YSESN 123
            S S+
Sbjct: 174 SSSSS 178

[Close]

BLAST of CSPI02G06500 vs. NCBI nr
Match: KAE8651685.1 (hypothetical protein Csa_023958 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 5.7e-24
Identity = 61/64 (95.31%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 1  MKKVMFTLINTPKNNRFFQKKRDNRQCMWISKTQNKKGNLAEIFKVDDKGRKGYKLVQES 60
          MKKVMFTLINT KNNRFFQKKRDNRQCMWISKTQNKKGNLAEIFKVDDKGRK YKLVQES
Sbjct: 1  MKKVMFTLINTLKNNRFFQKKRDNRQCMWISKTQNKKGNLAEIFKVDDKGRKCYKLVQES 60

Query: 61 VEKT 65
          VE T
Sbjct: 61 VEIT 64

[Close]

BLAST of CSPI02G06500 vs. NCBI nr
Match: KAA0067710.1 (hypothetical protein E6C27_scaffold352G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-15
Identity = 50/122 (40.98%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 1   MKKVMFTLINTPKNNRFFQKKRDNRQCMWISKTQNKKGNLAEIFKVDDKGRKGYKLVQES 60
           +K    TL++TP+  RFF KKR    C+W+ KT N+KG +AEI++VDD+GRK   LV E 
Sbjct: 24  LKSTFKTLLDTPRTTRFFLKKRFEEYCLWVQKTYNRKGYIAEIYRVDDRGRKCCILVPEG 83

Query: 61  VEKTGWSDFLKMLNYKAERETKALHAGYHSRKFEVDTSSAESDTDERNKKRTYAEVLYSE 120
            EK+GW+ F+ +L+ K +  TK  +      K +   SS+ES  D+  K+R+YA+ +   
Sbjct: 84  SEKSGWAQFVSLLHGKKDASTKENYKTLLGTKMKDRLSSSESGDDK--KRRSYAKAVIKG 143

Query: 121 SN 123
           S+
Sbjct: 144 SS 143

[Close]

BLAST of CSPI02G06500 vs. NCBI nr
Match: TYK10355.1 (hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 8.3e-15
Identity = 50/122 (40.98%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 1   MKKVMFTLINTPKNNRFFQKKRDNRQCMWISKTQNKKGNLAEIFKVDDKGRKGYKLVQES 60
           +K    TL++TP+  RFF +KR    C+W+ KT N+KG +AEI++VDD+GRK   LV E 
Sbjct: 144 LKSSFRTLLDTPRTTRFFLEKRFEDYCLWVQKTYNRKGYIAEIYRVDDRGRKCCILVPEG 203

Query: 61  VEKTGWSDFLKMLNYKAERETKALHAGYHSRKFEVDTSSAESDTDERNKKRTYAEVLYSE 120
            EK+GW+ F+ +L  K +  TK  +    + K +   SS+ES  D   K+R+YAE +   
Sbjct: 204 SEKSGWAQFVSLLYGKKDSSTKTNYRTLLNTKLKDRFSSSESGDD--TKRRSYAEAVIKG 263

Query: 121 SN 123
           S+
Sbjct: 264 SS 263

[Close]

BLAST of CSPI02G06500 vs. NCBI nr
Match: KAA0040039.1 (hypothetical protein E6C27_scaffold366G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 1.9e-14
Identity = 49/122 (40.16%), Postives = 75/122 (61.48%), Query Frame = 0


Query: 1   MKKVMFTLINTPKNNRFFQKKRDNRQCMWISKTQNKKGNLAEIFKVDDKGRKGYKLVQES 60
           +K    TL++TP+  RFF +KR    C+W+ KT N+KG +AEI++VDD+GRK   LV E 
Sbjct: 54  LKSSFRTLLDTPRTTRFFLEKRFEECCLWVQKTYNRKGYIAEIYRVDDRGRKCCILVPEG 113

Query: 61  VEKTGWSDFLKMLNYKAERETKALHAGYHSRKFEVDTSSAESDTDERNKKRTYAEVLYSE 120
            EK+GW+ F+ +L+ K +  +K  +    + K     SS  SD+ E  K+R+YAE +   
Sbjct: 114 AEKSGWAHFVSLLHGKKDPSSKTNYRTILNTKMRDGFSS--SDSGEDTKRRSYAEAVIKG 173

Query: 121 SN 123
           S+
Sbjct: 174 SS 173

[Close]

BLAST of CSPI02G06500 vs. NCBI nr
Match: KAA0050054.1 (hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 4.6e-13
Identity = 48/122 (39.34%), Postives = 73/122 (59.84%), Query Frame = 0


Query: 1   MKKVMFTLINTPKNNRFFQKKRDNRQCMWISKTQNKKGNLAEIFKVDDKGRKGYKLVQES 60
           +K    TL++T +  RFF +KR    C+W+ KT N+KG +AEI++VDD+GRK   LV E 
Sbjct: 92  LKSSFRTLLDTLRTTRFFLEKRFEDYCLWVQKTYNRKGYIAEIYRVDDRGRKCCILVPEG 151

Query: 61  VEKTGWSDFLKMLNYKAERETKALHAGYHSRKFEVDTSSAESDTDERNKKRTYAEVLYSE 120
            EK+GW+ F+ +L  K +   K  +    + K +   SS+ES  D   K+R+YAE +   
Sbjct: 152 SEKSGWAQFVSLLYGKKDSSKKTNYRTLLNTKLKDGFSSSESGDD--TKRRSYAEAVIKG 211

Query: 121 SN 123
           S+
Sbjct: 212 SS 211

The following BLAST results are available for this feature:

BLAST of CSPI02G06500 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI02G06500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VKI3	6.2e-16	40.98	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CFS8	4.0e-15	40.98	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TFK7	9.0e-15	40.16	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7U495	2.2e-13	39.34	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3E0Y8	2.9e-13	38.40	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of CSPI02G06500 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651685.1	5.7e-24	95.31	hypothetical protein Csa_023958 [Cucumis sativus]	[more]
KAA0067710.1	1.3e-15	40.98	hypothetical protein E6C27_scaffold352G00160 [Cucumis melo var. makuwa]	[more]
TYK10355.1	8.3e-15	40.98	hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa]	[more]
KAA0040039.1	1.9e-14	40.16	hypothetical protein E6C27_scaffold366G00060 [Cucumis melo var. makuwa]	[more]
KAA0050054.1	4.6e-13	39.34	hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]	[more]

BLAST of CSPI02G06500 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G06500.1	CSPI02G06500.1	mRNA