CSPI02G06060 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G06060
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	40S ribosomal protein S8
Location	Chr2: 4583090 .. 4585589 (+)
RNA-Seq Expression	CSPI02G06060
Synteny	CSPI02G06060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAACTGAAAGCAAATTAAACCTAACCCTCGCCGCATCAAAACCCTTCTCAGCCCCCTCCATTCTCTCTCTCGACCTTCTCTCGATCGTTCAAGGTTCGTTCCTTACTGAATCTGTTATCTTCTTTACAAGATTTCTTTGTGTTTTACCATTTTCACAATCTTGATTGAATGTTTGTTTGTTTAATTTTACTATTCCTTCTTTACTCACTACTCCTTCTCACAGTTCCGTCATTTTGTTTGAATGCTAAATATTGAATTGTAATTAACAATGGGTGTTCTCTCTCTGCTGCTCATGGTGATTTCATGGTTATTGTAGTAGTTTTCTTTATTACTGATGCAATGGCTATTACAATTCTTCATAACTTTTTAAATATTCTGTATATTCTCTTTGCACTTCTTCAATATTGGTTTTTGGTTATCAATTTGCTTTAGTTTTAGCTCTAAGATCTGGTTGACTTATTATTAGCTGTTGTTCGAATGGTTCCGAGGTTACCTGTGATGTTGATGGTTTTTCTTCGGACATTTATGTTACTGATTTTTTATTTACTAGTCATTGGTGCTACTGTTTAGGTTTTCAGTTTCTTTTGGCTTTCCTTGGTTTGATGTGCATTGGATTGTTGGCTTGGTCGATATTTTTTCAGGAATCCTAGACTCGTCTTTACTCCGAGAGCCCACGTCTTACCAAGATGGGTATGTGAGATAGATTTTACATATTGTTAACACACATCTAAATTCTGTACGTGTTTTCTTTTTGTTAATCTGAGAGAACTTTTTTCTTTTTCCTATAGGTATTTCCCGTGATTCTATGCACAAAAGGCGTGAAACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGCGAAAGTAACTACCACTTTTTATATTTCATCGAGTATTTTTTTAACGATCAGTTTTTATTTCCATTTCCTCACATTAACTGGTAATAGTTTCACTGGAAAGTTCGTATATCTTTTCTTTGCCCAATATTAGTACGAATCTGTACTTTTGTACGTTAGGCCGAATTTTTTGTTTTTTTTTTTTTGTGTGGATAAGTGTTGTGGAGTTAGCAGAAAGGAACTGTCATTTGTTTTCTTCTCCAATATAGATTTAATCTTCTCTTATGTCGGGTGTTTATGGTTTTTTACTCTGCATTATCTCTCTGATTCTCTCGGATGGATTGTTGTTTAATTTTATGTATCAATCACAGATGATTTCTTTTGTTCAAATCAAGATACAATTTTCATCTGCTATTGTTTCTTTCCTTGCTGTATGTGAAGGTATGAGCTTGGAAGGCAACCTGCCAACACCAAGTTATCCAGTGACAAGTCAATCAGGAGGATTAGAGTTCGAGGGGGTAATGTGAAGTGGCGTGCGTTTAGGCTGGATACTGGAAATTACTCTTGGGGTAGTGAGGCCGTGACTAGAAAGACCCGTCTTCTTGATGTGGTCTACAATGCATCTAACAACGAGCTTGTTCGTACTCAAACCTTAGTGAAGAGTGCCATAGTTCAAGTTGATGCAGCACCATTTAAGCAGTGGTATCTTCAGCATTATGGCGTGGATATTGGCCGGAAGAAGAAGACCTCTGCATCTGTTAAGAAGGAAGAGGTAGAGGATGATTCATAGATTAAATGATTGATTTGGTCTATCTAATTTTCAGTACAAGTATTTATGTGCAATTAAGTTTCTCATGAGAAGTTAGTGCGTTGGTAACCATGTCCATTAGAGATGGTTGAATGGGACACAACACAATTTCACAGCTTTATTTTTATGGTTGATAGGAAGGCGATGCTGGCACTGAGGAGGTAAAGAAGAGTAACCATGTCCAGCGCAAAATAGAGAAACGTCGGCAGGACCGCAAGCTTGACCCACATATTGAAGAACAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGGCCTGGTCAATGTGGCCGAGCAGATGGGTAAGGAATTCGAAGCTCTTAATGATTCTCTATTCTCTCATGTTCTTTCTTACTTGGATGAGCACAATCATTGAGGTATGTTGACTGACGTCTTGGAAAAATTAACAGATATATCTTGGAGGGCAAAGAGCTCGAATTCTATATGAAGAAGCTCCAAAGAAAGAAGGGAAAAGGAGCTGGTGCTGCTTAAATTTTGGTTATGGTTTCAGCCAGTATTTTCCTGTTCACTCCTTTTCTTATGAAGACAACGAGCTGTTGCAGCTATTTTGGAACTTTGATTTTGCTGGTAATAGTTTAATTATAGTACCTTTGACCTTTTTTCATGGTAACAACAGTTTGCTTAATTAGCTTGAGTTTAAGTTCAAAATTTTCTAGTCAATTTATGTAAGCGGGTTGGTTTGGTTGTTTGATCTAGAATTTATAGAAGTACAAATGGATTATAGAGTGATTTAAACTCACACTGCTTCTTTTAAAACCAATTTCGCTGAATTTCTCACTTTATAATTTTTGTTATGTCTCTGAAAGTTCGAAGTTTCCAATTCTTCTTTA

mRNA sequence

AACAAACTGAAAGCAAATTAAACCTAACCCTCGCCGCATCAAAACCCTTCTCAGCCCCCTCCATTCTCTCTCTCGACCTTCTCTCGATCGTTCAAGGAATCCTAGACTCGTCTTTACTCCGAGAGCCCACGTCTTACCAAGATGGGTATTTCCCGTGATTCTATGCACAAAAGGCGTGAAACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGCGAAAGTATGAGCTTGGAAGGCAACCTGCCAACACCAAGTTATCCAGTGACAAGTCAATCAGGAGGATTAGAGTTCGAGGGGGTAATGTGAAGTGGCGTGCGTTTAGGCTGGATACTGGAAATTACTCTTGGGGTAGTGAGGCCGTGACTAGAAAGACCCGTCTTCTTGATGTGGTCTACAATGCATCTAACAACGAGCTTGTTCGTACTCAAACCTTAGTGAAGAGTGCCATAGTTCAAGTTGATGCAGCACCATTTAAGCAGTGGTATCTTCAGCATTATGGCGTGGATATTGGCCGGAAGAAGAAGACCTCTGCATCTGTTAAGAAGGAAGAGGAAGGCGATGCTGGCACTGAGGAGGTAAAGAAGAGTAACCATGTCCAGCGCAAAATAGAGAAACGTCGGCAGGACCGCAAGCTTGACCCACATATTGAAGAACAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGGCCTGGTCAATGTGGCCGAGCAGATGGATATATCTTGGAGGGCAAAGAGCTCGAATTCTATATGAAGAAGCTCCAAAGAAAGAAGGGAAAAGGAGCTGGTGCTGCTTAAATTTTGGTTATGGTTTCAGCCAGTATTTTCCTGTTCACTCCTTTTCTTATGAAGACAACGAGCTGTTGCAGCTATTTTGGAACTTTGATTTTGCTGGTAATAGTTTAATTATAGTACCTTTGACCTTTTTTCATGGTAACAACAGTTTGCTTAATTAGCTTGAGTTTAAGTTCAAAATTTTCTAGTCAATTTATGTAAGCGGGTTGGTTTGGTTGTTTGATCTAGAATTTATAGAAGTACAAATGGATTATAGAGTGATTTAAACTCACACTGCTTCTTTTAAAACCAATTTCGCTGAATTTCTCACTTTATAATTTTTGTTATGTCTCTGAAAGTTCGAAGTTTCCAATTCTTCTTTA

Coding sequence (CDS)

ATGGGTATTTCCCGTGATTCTATGCACAAAAGGCGTGAAACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGCGAAAGTATGAGCTTGGAAGGCAACCTGCCAACACCAAGTTATCCAGTGACAAGTCAATCAGGAGGATTAGAGTTCGAGGGGGTAATGTGAAGTGGCGTGCGTTTAGGCTGGATACTGGAAATTACTCTTGGGGTAGTGAGGCCGTGACTAGAAAGACCCGTCTTCTTGATGTGGTCTACAATGCATCTAACAACGAGCTTGTTCGTACTCAAACCTTAGTGAAGAGTGCCATAGTTCAAGTTGATGCAGCACCATTTAAGCAGTGGTATCTTCAGCATTATGGCGTGGATATTGGCCGGAAGAAGAAGACCTCTGCATCTGTTAAGAAGGAAGAGGAAGGCGATGCTGGCACTGAGGAGGTAAAGAAGAGTAACCATGTCCAGCGCAAAATAGAGAAACGTCGGCAGGACCGCAAGCTTGACCCACATATTGAAGAACAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGGCCTGGTCAATGTGGCCGAGCAGATGGATATATCTTGGAGGGCAAAGAGCTCGAATTCTATATGAAGAAGCTCCAAAGAAAGAAGGGAAAAGGAGCTGGTGCTGCTTAA

Protein sequence

MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA*

Homology

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BLAST of CSPI02G06060 vs. ExPASy Swiss-Prot
Match: O81361 (40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 4.4e-102
Identity = 191/220 (86.82%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSASVK-KEEEGDAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRLMA 180
           +IGRKKKT+A+ K   EEG+A TEE KKSNHV  K+EKR+Q R LD HIEEQF  G+L+A
Sbjct: 121 EIGRKKKTAAAKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLA 180

Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           CISSRPGQCG+ADG ILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 CISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKGAGAA 220

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BLAST of CSPI02G06060 vs. ExPASy Swiss-Prot
Match: Q08069 (40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 371.3 bits (952), Expect = 7.5e-102
Identity = 189/221 (85.52%), Postives = 201/221 (90.95%), Query Frame = 0


Query: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGK+KAWRKKRKYELGRQPANTKLSS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTSASVKKEEEG---DAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRL 180
           DIGRKKKT A+ K   EG   +A  EE KKSNHV RK+EKR++ R LDPHIEEQF SGRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 219
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK A A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAVA 221

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BLAST of CSPI02G06060 vs. ExPASy Swiss-Prot
Match: P49199 (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 370.5 bits (950), Expect = 1.3e-101
Identity = 191/221 (86.43%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGK+KAWRKKRKYELGRQPANTKLSS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTSASVKKEEEG---DAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRL 180
           DIGRKKK  A+ KK+ EG   +A TEE KKSNHV RK+EKR+Q R LD HIEEQF SGRL
Sbjct: 121 DIGRKKKAPAA-KKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 219
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGASA 220

[Close]

BLAST of CSPI02G06060 vs. ExPASy Swiss-Prot
Match: Q93VG5 (40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.5e-97
Identity = 179/221 (81.00%), Postives = 202/221 (91.40%), Query Frame = 0


Query: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRR TGGK+K WRKKRKYE+GRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTSASVKKE-EEGD----AGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSG 180
           ++GRKKK+++S KK+ EEG+    A  EEVKKSNH+ RKI  R++ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 217
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]

BLAST of CSPI02G06060 vs. ExPASy Swiss-Prot
Match: Q9FIF3 (40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.5e-97
Identity = 182/219 (83.11%), Postives = 196/219 (89.50%), Query Frame = 0


Query: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRR TGGK+K WRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTR+LDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKK  A           TEEVKKSNHVQRK+E R++ R LD H+EEQFSSGRL+AC
Sbjct: 121 DIGRKKKGEA---------VTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           I+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 IASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]

BLAST of CSPI02G06060 vs. ExPASy TrEMBL
Match: A0A0A0LJA0 (40S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_2G059750 PE=3 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.5e-116
Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKR+QDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of CSPI02G06060 vs. ExPASy TrEMBL
Match: A0A5D3BT12 (40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00420 PE=3 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115
Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKTSAS KKEEEGDAGTEEVKKSNHVQRKIEKR+QDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of CSPI02G06060 vs. ExPASy TrEMBL
Match: A0A1S3BRZ4 (40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103492879 PE=3 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115
Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKTSAS KKEEEGDAGTEEVKKSNHVQRKIEKR+QDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of CSPI02G06060 vs. ExPASy TrEMBL
Match: A0A5A7UI08 (40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00400 PE=3 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.3e-114
Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 3   ISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLD 62
           ISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLD
Sbjct: 23  ISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLD 82

Query: 63  TGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDI 122
           TGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDI
Sbjct: 83  TGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDI 142

Query: 123 GRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRLMACIS 182
           GRKKKTSAS KKEEEGDAGTEEVKKSNHVQRKIEKR+QDRKLDPHIEEQFSSGRLMACIS
Sbjct: 143 GRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACIS 202

Query: 183 SRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           SRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 203 SRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 239

[Close]

BLAST of CSPI02G06060 vs. ExPASy TrEMBL
Match: A0A6J1K537 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111492371 PE=3 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.3e-112
Identity = 211/219 (96.35%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+R+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT AS KKEEEGDA TEEVKKSNHVQRKIEKR+QDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of CSPI02G06060 vs. NCBI nr
Match: XP_004148331.1 (40S ribosomal protein S8 [Cucumis sativus] >KGN61144.1 hypothetical protein Csa_021356 [Cucumis sativus])

HSP 1 Score: 427.9 bits (1099), Expect = 5.1e-116
Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKR+QDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of CSPI02G06060 vs. NCBI nr
Match: XP_008451649.1 (PREDICTED: 40S ribosomal protein S8-like [Cucumis melo] >TYK01356.1 40S ribosomal protein S8-like [Cucumis melo var. makuwa])

HSP 1 Score: 425.6 bits (1093), Expect = 2.5e-115
Identity = 216/219 (98.63%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKTSAS KKEEEGDAGTEEVKKSNHVQRKIEKR+QDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of CSPI02G06060 vs. NCBI nr
Match: KAA0055563.1 (40S ribosomal protein S8-like [Cucumis melo var. makuwa])

HSP 1 Score: 421.4 bits (1082), Expect = 4.8e-114
Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 3   ISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLD 62
           ISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLD
Sbjct: 23  ISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLD 82

Query: 63  TGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDI 122
           TGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDI
Sbjct: 83  TGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDI 142

Query: 123 GRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRLMACIS 182
           GRKKKTSAS KKEEEGDAGTEEVKKSNHVQRKIEKR+QDRKLDPHIEEQFSSGRLMACIS
Sbjct: 143 GRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACIS 202

Query: 183 SRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           SRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 203 SRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 239

[Close]

BLAST of CSPI02G06060 vs. NCBI nr
Match: XP_038891236.1 (40S ribosomal protein S8 [Benincasa hispida])

HSP 1 Score: 416.0 bits (1068), Expect = 2.0e-112
Identity = 211/219 (96.35%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT AS KK+EEGDA TEEVKKSNHVQRKIEKR+QDRKLDPHIEEQF SGRLMAC
Sbjct: 121 DIGRKKKTLASAKKDEEGDAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFGSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of CSPI02G06060 vs. NCBI nr
Match: XP_022929761.1 (40S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal protein S8-like [Cucurbita moschata] >XP_022997461.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_022997462.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_023547179.1 40S ribosomal protein S8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 415.6 bits (1067), Expect = 2.6e-112
Identity = 211/219 (96.35%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+R+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT AS KKEEEGDA TEEVKKSNHVQRKIEKR+QDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of CSPI02G06060 vs. TAIR 10
Match: AT5G59240.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 355.1 bits (910), Expect = 3.9e-98
Identity = 182/219 (83.11%), Postives = 196/219 (89.50%), Query Frame = 0


Query: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRR TGGK+K WRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTR+LDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKK  A           TEEVKKSNHVQRK+E R++ R LD H+EEQFSSGRL+AC
Sbjct: 121 DIGRKKKGEA---------VTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           I+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 IASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]

BLAST of CSPI02G06060 vs. TAIR 10
Match: AT5G20290.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 355.1 bits (910), Expect = 3.9e-98
Identity = 179/221 (81.00%), Postives = 202/221 (91.40%), Query Frame = 0


Query: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRR TGGK+K WRKKRKYE+GRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTSASVKKE-EEGD----AGTEEVKKSNHVQRKIEKRRQDRKLDPHIEEQFSSG 180
           ++GRKKK+++S KK+ EEG+    A  EEVKKSNH+ RKI  R++ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 217
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

The following BLAST results are available for this feature:

BLAST of CSPI02G06060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81361	4.4e-102	86.82	40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1	[more]
Q08069	7.5e-102	85.52	40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2	[more]
P49199	1.3e-101	86.43	40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 S...	[more]
Q93VG5	5.5e-97	81.00	40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1	[more]
Q9FIF3	5.5e-97	83.11	40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1	[more]

BLAST of CSPI02G06060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJA0	2.5e-116	99.54	40S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_2G059750 PE=3 SV=1	[more]
A0A5D3BT12	1.2e-115	98.63	40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BRZ4	1.2e-115	98.63	40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103492879 PE=3 SV=1	[more]
A0A5A7UI08	2.3e-114	98.62	40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A6J1K537	1.3e-112	96.35	40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111492371 PE=3 SV=1	[more]

BLAST of CSPI02G06060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148331.1	5.1e-116	99.54	40S ribosomal protein S8 [Cucumis sativus] >KGN61144.1 hypothetical protein Csa_...	[more]
XP_008451649.1	2.5e-115	98.63	PREDICTED: 40S ribosomal protein S8-like [Cucumis melo] >TYK01356.1 40S ribosoma...	[more]
KAA0055563.1	4.8e-114	98.62	40S ribosomal protein S8-like [Cucumis melo var. makuwa]	[more]
XP_038891236.1	2.0e-112	96.35	40S ribosomal protein S8 [Benincasa hispida]	[more]
XP_022929761.1	2.6e-112	96.35	40S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal...	[more]

BLAST of CSPI02G06060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59240.1	3.9e-98	83.11	Ribosomal protein S8e family protein	[more]
AT5G20290.1	3.9e-98	81.00	Ribosomal protein S8e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042563	Ribosomal protein S8e subdomain, eukaryotes	GENE3D	1.10.168.20	Ribosomal protein S8e, subdomain	coord: 108..175 e-value: 3.6E-27 score: 96.8
IPR001047	Ribosomal protein S8e	TIGRFAM	TIGR00307	TIGR00307	coord: 1..198 e-value: 5.3E-45 score: 150.6
IPR001047	Ribosomal protein S8e	PANTHER	PTHR10394	40S RIBOSOMAL PROTEIN S8	coord: 1..217
IPR022309	Ribosomal protein S8e/ribosomal biogenesis NSA2	PFAM	PF01201	Ribosomal_S8e	coord: 1..196 e-value: 1.6E-54 score: 183.8
None	No IPR available	GENE3D	3.10.290.70		coord: 26..212 e-value: 8.4E-55 score: 186.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..168
None	No IPR available	PANTHER	PTHR10394:SF18	40S RIBOSOMAL PROTEIN S8	coord: 1..217
None	No IPR available	CDD	cd11380	Ribosomal_S8e_like	coord: 5..196 e-value: 1.20943E-55 score: 171.934
IPR018283	Ribosomal protein S8e, conserved site	PROSITE	PS01193	RIBOSOMAL_S8E	coord: 11..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G06060.1	CSPI02G06060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome