CSPI02G05500 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G05500
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	TF-B3 domain-containing protein
Location	Chr2: 3973469 .. 3974146 (+)
RNA-Seq Expression	CSPI02G05500
Synteny	CSPI02G05500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAAGGTACGATACACTTACAATAACAAAATAGTTGAAAAGCACGTATATGAAGCATCTTTGGCTCTTTGTCACATGAAAAATAGTAGATGTTTGAAACCATTTGAGAAACCAGTAACTCGTTTAAACAATCGATTTTCAAGTTCAACTTCCATTTCTATACTCAACAAACAACCTCCGATACTCATTGAACGTGCTCCGGTAGTCAATGAAGCTTTACTCAACAACAACAACAACAATGAAAATGTGGCTGTAGTTGTGGCTGATAGAGATCGGGGTAGAGTTCCGCCAATGGCAGTGATCCAAAACATAATTGGAGAGTGCAGTCCACCGTTTGTGAAGCAATTGATGAAAACAGATGTGACAGAAAGTCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGACTCGTAATTTGATTCCAATGTTCAATAGAGGTGAGAATTTGAAGAATGGAATTAGTGTTACGGTTTATGATAGTGAAGGAAGAGAATACGACATGATATTCAAGTTTTGGACTTCTAAACTTTATGTGCTAACGAAAAGTTGGAATAAGTTTTACAAGAGCAATAATTTGACGCGACCCGGTGAGTTTATTAGTGTTTGGATGTTTCGACATGTCGTCAATCGTAAGCTTTGCTTTGCTATCATGAGAGGAGATGCTGAACAACGGTGA

mRNA sequence

ATGGTTAAGGTACGATACACTTACAATAACAAAATAGTTGAAAAGCACGTATATGAAGCATCTTTGGCTCTTTGTCACATGAAAAATAGTAGATGTTTGAAACCATTTGAGAAACCAGTAACTCGTTTAAACAATCGATTTTCAAGTTCAACTTCCATTTCTATACTCAACAAACAACCTCCGATACTCATTGAACGTGCTCCGGTAGTCAATGAAGCTTTACTCAACAACAACAACAACAATGAAAATGTGGCTGTAGTTGTGGCTGATAGAGATCGGGGTAGAGTTCCGCCAATGGCAGTGATCCAAAACATAATTGGAGAGTGCAGTCCACCGTTTGTGAAGCAATTGATGAAAACAGATGTGACAGAAAGTCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGACTCGTAATTTGATTCCAATGTTCAATAGAGGTGAGAATTTGAAGAATGGAATTAGTGTTACGGTTTATGATAGTGAAGGAAGAGAATACGACATGATATTCAAGTTTTGGACTTCTAAACTTTATGTGCTAACGAAAAGTTGGAATAAGTTTTACAAGAGCAATAATTTGACGCGACCCGGTGAGTTTATTAGTGTTTGGATGTTTCGACATGTCGTCAATCGTAAGCTTTGCTTTGCTATCATGAGAGGAGATGCTGAACAACGGTGA

Coding sequence (CDS)

ATGGTTAAGGTACGATACACTTACAATAACAAAATAGTTGAAAAGCACGTATATGAAGCATCTTTGGCTCTTTGTCACATGAAAAATAGTAGATGTTTGAAACCATTTGAGAAACCAGTAACTCGTTTAAACAATCGATTTTCAAGTTCAACTTCCATTTCTATACTCAACAAACAACCTCCGATACTCATTGAACGTGCTCCGGTAGTCAATGAAGCTTTACTCAACAACAACAACAACAATGAAAATGTGGCTGTAGTTGTGGCTGATAGAGATCGGGGTAGAGTTCCGCCAATGGCAGTGATCCAAAACATAATTGGAGAGTGCAGTCCACCGTTTGTGAAGCAATTGATGAAAACAGATGTGACAGAAAGTCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGACTCGTAATTTGATTCCAATGTTCAATAGAGGTGAGAATTTGAAGAATGGAATTAGTGTTACGGTTTATGATAGTGAAGGAAGAGAATACGACATGATATTCAAGTTTTGGACTTCTAAACTTTATGTGCTAACGAAAAGTTGGAATAAGTTTTACAAGAGCAATAATTTGACGCGACCCGGTGAGTTTATTAGTGTTTGGATGTTTCGACATGTCGTCAATCGTAAGCTTTGCTTTGCTATCATGAGAGGAGATGCTGAACAACGGTGA

Protein sequence

MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQPPILIERAPVVNEALLNNNNNNENVAVVVADRDRGRVPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDAEQR*

Homology

[Close]

BLAST of CSPI02G05500 vs. ExPASy Swiss-Prot
Match: Q9ZR14 (Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana OX=3702 GN=At4g03170 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-18
Identity = 48/109 (44.04%), Postives = 62/109 (56.88%), Query Frame = 0


Query: 110 SPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMI 169
           S P  KQLM +DV + Q  L L KE V   ++P     EN   GI V+VY  +G+   M 
Sbjct: 133 SRPIKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVYGPDGKVQQME 192

Query: 170 FKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAI 218
           FK W   K  VLT  W +F +   L+   +F++VWMFRH+  RKLCFAI
Sbjct: 193 FKMWNGDKTPVLTSGWKQFVEDYGLSMTCDFVTVWMFRHIKTRKLCFAI 241

[Close]

BLAST of CSPI02G05500 vs. ExPASy Swiss-Prot
Match: Q9ZR15 (Putative B3 domain-containing protein At4g03160 OS=Arabidopsis thaliana OX=3702 GN=At4g03160 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.6e-14
Identity = 41/104 (39.42%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 115 KQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENL-KNGISVTVYDSEGREYDMIFKFW 174
           +QLM +DV ++Q RL L KE V + ++    + E L   G++V+VY   G  + M+ K W
Sbjct: 67  EQLMDSDVKDNQYRLMLGKEPV-KKMMDALGKTEKLGTKGLNVSVYGPNGENHKMVLKIW 126

Query: 175 TSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAI 218
                VLT  W  F KS  L +  +F+++WMFRH   R++CFAI
Sbjct: 127 IKGTPVLTSGWKNFVKSYKLEKHVDFLTIWMFRHKKTREICFAI 169

[Close]

BLAST of CSPI02G05500 vs. ExPASy Swiss-Prot
Match: Q9LM90 (B3 domain-containing protein At1g20600 OS=Arabidopsis thaliana OX=3702 GN=At1g20600 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 45/165 (27.27%), Postives = 70/165 (42.42%), Query Frame = 0


Query: 40  VTRLNNRFSSSTSISILNKQPPILIERAPVVNEALLNNNNNNENVAVVVADRDRGRVPPM 99
           V++ N + S          QP    +R    N   +N ++ +E    ++ D     + P 
Sbjct: 54  VSQANQKQSRKREEKTEKNQP----KRVKNQNIMKINIHDFSEETLRLIEDWYNAELDPQ 113

Query: 100 AVI--QNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVT 159
            +     +    S P  KQLM +DV   Q RL L KE V   ++P     E+   G+ V+
Sbjct: 114 DIFGDDEVTRRFSRPIKKQLMSSDVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVS 173

Query: 160 VYDSEGREYDMIFKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFIS 202
           VY  +G    M FK W   K  VLT  W +F     L +  +F++
Sbjct: 174 VYGPDGEVQQMKFKMWNGDKTPVLTSGWMQFVADYGLLKTSDFVT 214

[Close]

BLAST of CSPI02G05500 vs. ExPASy TrEMBL
Match: A0A5D3BAS8 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00040 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.3e-88
Identity = 174/231 (75.32%), Postives = 189/231 (81.82%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSIS------ 60
           MVKV Y YNNKIV+K VYEA LALC MK S   +PFE+P     N+F SSTSIS      
Sbjct: 1   MVKVGYIYNNKIVKKEVYEACLALCEMKKSS--EPFEEP-----NQFPSSTSISMVDDQP 60

Query: 61  -ILNKQPPILIERAPVVNEALL-NNNNNNENVAVVVADRDRGRVPPMAVIQNIIGECSPP 120
            ++N+QPPI+ E APVVNEALL NNNNNNENVA VVADRD GR+PPMAVIQNIIGECSPP
Sbjct: 61  PVVNEQPPIVNEHAPVVNEALLNNNNNNNENVAAVVADRDLGRLPPMAVIQNIIGECSPP 120

Query: 121 FVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKF 180
           FVKQL KTDVT+SQGRLALHKEFV RNL+PMFN  E L NGISVTVYDSEGREYDM F+ 
Sbjct: 121 FVKQLTKTDVTDSQGRLALHKEFVNRNLVPMFNGDEILTNGISVTVYDSEGREYDMTFRL 180

Query: 181 WTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDAE 224
           WTSKLYVLTKSW KFY  N LTRP EFI++WMFRHVVN KLCFAIMRG+ E
Sbjct: 181 WTSKLYVLTKSWKKFYHDNGLTRPDEFITLWMFRHVVNHKLCFAIMRGNVE 224

[Close]

BLAST of CSPI02G05500 vs. ExPASy TrEMBL
Match: A0A0A0L7L0 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073910 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 9.2e-82
Identity = 160/226 (70.80%), Postives = 184/226 (81.42%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQP 60
           MV V YTYNNKIV + VY+ASL L  M  S+ ++PFE+P+ R NN+  SSTS S++N+Q 
Sbjct: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQL-SSTSTSLVNEQS 60

Query: 61  PILIERAPVVNEALLNN---NNNNENV-AVVVADRDRGRVPPMAVIQNIIGECSPPFVKQ 120
           P++ E APVVNE L NN   N NNENV A VV  RD+GR PPMAVIQNIIGECSPPFVKQ
Sbjct: 61  PVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQ 120

Query: 121 LMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSK 180
           L KTDVT++QGRLALHKEFV  NL PMFN  E+L++GISV VYD EGREYDMIFK W SK
Sbjct: 121 LTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASK 180

Query: 181 LYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDA 223
           LYVLTKSW +FYK+N+LT+PGEFISVWMFRHVV +KLCFAIMRG A
Sbjct: 181 LYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQA 225

[Close]

BLAST of CSPI02G05500 vs. ExPASy TrEMBL
Match: A0A0A0LC65 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G609250 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 9.8e-68
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 99  MAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTV 158
           MAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTV
Sbjct: 1   MAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTV 60

Query: 159 YDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIM 218
           YDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIM
Sbjct: 61  YDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIM 120

Query: 219 RGDAEQR 226
           RGDAEQR
Sbjct: 121 RGDAEQR 127

[Close]

BLAST of CSPI02G05500 vs. ExPASy TrEMBL
Match: A0A6J1CTE7 (putative B3 domain-containing protein At4g03170 OS=Momordica charantia OX=3673 GN=LOC111014582 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.1e-34
Identity = 93/238 (39.08%), Postives = 133/238 (55.88%), Query Frame = 0


Query: 9   NNKIVEKHVYEASLALCHMKNS------------------RCLKPFEKPVTR---LNNRF 68
           N K  +  VYEA++ L  M  S                  + +  F+KP  +   +N+  
Sbjct: 6   NKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNV 65

Query: 69  SSSTSISILNKQPPILIERAPVVNEALLNNNNNNENVAVVVADRDRGRVPPMAVIQNIIG 128
            ++ ++++  ++ P       V  EA  +  NNN +        +R  +PP+  I+++IG
Sbjct: 66  HNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNND------GEERRGMPPVPAIRDVIG 125

Query: 129 ECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFN---RGENLKNGISVTVYDSEGR 188
           +CS  + K+L  +DV E+QGRLA+ KEFVT+ L PMFN     ENL+ GI VTVY+ EGR
Sbjct: 126 QCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGR 185

Query: 189 EYDMIFKFWTSKLYVLTKSWNKFYKSNNLT--RPGEFISVWMFRHVVNRKLCFAIMRG 221
           E+ M FK W SKLYVL K W  F K+NNLT    GEF+++WMFRH     LCFAI+ G
Sbjct: 186 EFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILG 237

[Close]

BLAST of CSPI02G05500 vs. ExPASy TrEMBL
Match: A0A4Y1RVH6 (AP2/B3-like transcriptional factor family protein OS=Prunus dulcis OX=3755 GN=Prudu_020535 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.9e-27
Identity = 58/122 (47.54%), Postives = 81/122 (66.39%), Query Frame = 0


Query: 96  VPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGIS 155
           +PP+  +QN+I +CS PF KQL ++DV E Q RL+++KE V  N++P+   G+NL  GI 
Sbjct: 127 LPPIPSLQNLIQDCSKPFEKQLTRSDVKEDQCRLSMNKEDVEYNIMPLLRNGDNLNEGID 186

Query: 156 VTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCF 215
           VT YD  G EY M+FK W +K++VLT  W  F     L    +F+++W+FRHV N  LCF
Sbjct: 187 VTTYDMAGNEYPMVFKIWATKIHVLTGGWKTFCNDLGLVENQDFVTLWVFRHVDNGGLCF 246

Query: 216 AI 218
           AI
Sbjct: 247 AI 248

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BLAST of CSPI02G05500 vs. NCBI nr
Match: XP_031736688.1 (uncharacterized protein LOC116402065 [Cucumis sativus])

HSP 1 Score: 438.3 bits (1126), Expect = 3.9e-119
Identity = 218/225 (96.89%), Postives = 219/225 (97.33%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQP 60
           MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQP
Sbjct: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQP 60

Query: 61  PILIERAPVVNEALLNNNNNNENVAVVVADRDRGRVPPMAVIQNIIGECSPPFVKQLMKT 120
           PILIERAP+VNEAL   NNNNENVAV VA RD GRVPPMAVIQNIIGECSPPFVKQLMKT
Sbjct: 61  PILIERAPIVNEAL--PNNNNENVAVAVAGRDWGRVPPMAVIQNIIGECSPPFVKQLMKT 120

Query: 121 DVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVL 180
           DVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVL
Sbjct: 121 DVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVL 180

Query: 181 TKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDAEQR 226
           TKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDAEQR
Sbjct: 181 TKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDAEQR 223

[Close]

BLAST of CSPI02G05500 vs. NCBI nr
Match: KAA0043114.1 (putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYJ96217.1 putative B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 335.9 bits (860), Expect = 2.7e-88
Identity = 174/231 (75.32%), Postives = 189/231 (81.82%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSIS------ 60
           MVKV Y YNNKIV+K VYEA LALC MK S   +PFE+P     N+F SSTSIS      
Sbjct: 1   MVKVGYIYNNKIVKKEVYEACLALCEMKKSS--EPFEEP-----NQFPSSTSISMVDDQP 60

Query: 61  -ILNKQPPILIERAPVVNEALL-NNNNNNENVAVVVADRDRGRVPPMAVIQNIIGECSPP 120
            ++N+QPPI+ E APVVNEALL NNNNNNENVA VVADRD GR+PPMAVIQNIIGECSPP
Sbjct: 61  PVVNEQPPIVNEHAPVVNEALLNNNNNNNENVAAVVADRDLGRLPPMAVIQNIIGECSPP 120

Query: 121 FVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKF 180
           FVKQL KTDVT+SQGRLALHKEFV RNL+PMFN  E L NGISVTVYDSEGREYDM F+ 
Sbjct: 121 FVKQLTKTDVTDSQGRLALHKEFVNRNLVPMFNGDEILTNGISVTVYDSEGREYDMTFRL 180

Query: 181 WTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDAE 224
           WTSKLYVLTKSW KFY  N LTRP EFI++WMFRHVVN KLCFAIMRG+ E
Sbjct: 181 WTSKLYVLTKSWKKFYHDNGLTRPDEFITLWMFRHVVNHKLCFAIMRGNVE 224

[Close]

BLAST of CSPI02G05500 vs. NCBI nr
Match: KGN56101.1 (hypothetical protein Csa_010492 [Cucumis sativus])

HSP 1 Score: 313.2 bits (801), Expect = 1.9e-81
Identity = 160/226 (70.80%), Postives = 184/226 (81.42%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQP 60
           MV V YTYNNKIV + VY+ASL L  M  S+ ++PFE+P+ R NN+  SSTS S++N+Q 
Sbjct: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQL-SSTSTSLVNEQS 60

Query: 61  PILIERAPVVNEALLNN---NNNNENV-AVVVADRDRGRVPPMAVIQNIIGECSPPFVKQ 120
           P++ E APVVNE L NN   N NNENV A VV  RD+GR PPMAVIQNIIGECSPPFVKQ
Sbjct: 61  PVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQ 120

Query: 121 LMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSK 180
           L KTDVT++QGRLALHKEFV  NL PMFN  E+L++GISV VYD EGREYDMIFK W SK
Sbjct: 121 LTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASK 180

Query: 181 LYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDA 223
           LYVLTKSW +FYK+N+LT+PGEFISVWMFRHVV +KLCFAIMRG A
Sbjct: 181 LYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQA 225

[Close]

BLAST of CSPI02G05500 vs. NCBI nr
Match: KAG6589940.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-43
Identity = 106/226 (46.90%), Postives = 140/226 (61.95%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCL---KPFEKPVTRLNNRFSSSTSISILN 60
           MV+V Y +NN+I+EK VYE +      +   CL   + F +P    + + S STS  + +
Sbjct: 1   MVRVHYRHNNRIIEKDVYETA------RIFHCLCTGEQFPEPSYSSDEQVSGSTSGDMDD 60

Query: 61  KQPPILIERAPVVN---EALLNNNNNNENVAVVVADRDRGRVPPMAVIQNIIGECSPPFV 120
           +        AP +N   +  L      E VA VV       +P +AVI NIIG  SPP+ 
Sbjct: 61  E------NEAPSINGDEDVALEVEEVAEVVAPVV-------IPALAVIMNIIGARSPPWE 120

Query: 121 KQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWT 180
           K+L K+DV+E QGRL + KEFVT +L+PMFN  E+   GI VTVY+ EGR+YDM FK W 
Sbjct: 121 KRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWA 180

Query: 181 SKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRG 221
           SKLYVLTK WN FYK+NNLT PG ++++WMFRHV   K+CFA+  G
Sbjct: 181 SKLYVLTKGWNDFYKTNNLTDPGLYVTLWMFRHVETHKICFAVTAG 207

[Close]

BLAST of CSPI02G05500 vs. NCBI nr
Match: KAG7023605.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 173.3 bits (438), Expect = 2.3e-39
Identity = 83/139 (59.71%), Postives = 102/139 (73.38%), Query Frame = 0


Query: 82  ENVAVVVADRDRGRVPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLI 141
           E VA VVA      +P +AVI NIIG  SPP+ K+L K+DV+E QGRL + KEFVT +L+
Sbjct: 21  EEVAEVVAP---VVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLL 80

Query: 142 PMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFIS 201
           PMFN  E+   GI VTVY+ EGR+YDM FK W SKLYVLTK WN FYK+NNLT PG +++
Sbjct: 81  PMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVT 140

Query: 202 VWMFRHVVNRKLCFAIMRG 221
           +WMFRHV   K+CFA+  G
Sbjct: 141 LWMFRHVETHKICFAVTAG 156

[Close]

BLAST of CSPI02G05500 vs. TAIR 10
Match: AT4G03170.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 95.1 bits (235), Expect = 7.5e-20
Identity = 48/109 (44.04%), Postives = 62/109 (56.88%), Query Frame = 0


Query: 110 SPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMI 169
           S P  KQLM +DV + Q  L L KE V   ++P     EN   GI V+VY  +G+   M 
Sbjct: 133 SRPIKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVYGPDGKVQQME 192

Query: 170 FKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAI 218
           FK W   K  VLT  W +F +   L+   +F++VWMFRH+  RKLCFAI
Sbjct: 193 FKMWNGDKTPVLTSGWKQFVEDYGLSMTCDFVTVWMFRHIKTRKLCFAI 241

[Close]

BLAST of CSPI02G05500 vs. TAIR 10
Match: AT4G03160.1 (BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1); Has 46 Blast hits to 46 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 41/104 (39.42%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 115 KQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENL-KNGISVTVYDSEGREYDMIFKFW 174
           +QLM +DV ++Q RL L KE V + ++    + E L   G++V+VY   G  + M+ K W
Sbjct: 67  EQLMDSDVKDNQYRLMLGKEPV-KKMMDALGKTEKLGTKGLNVSVYGPNGENHKMVLKIW 126

Query: 175 TSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAI 218
                VLT  W  F KS  L +  +F+++WMFRH   R++CFAI
Sbjct: 127 IKGTPVLTSGWKNFVKSYKLEKHVDFLTIWMFRHKKTREICFAI 169

[Close]

BLAST of CSPI02G05500 vs. TAIR 10
Match: AT1G20600.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 45/165 (27.27%), Postives = 70/165 (42.42%), Query Frame = 0


Query: 40  VTRLNNRFSSSTSISILNKQPPILIERAPVVNEALLNNNNNNENVAVVVADRDRGRVPPM 99
           V++ N + S          QP    +R    N   +N ++ +E    ++ D     + P 
Sbjct: 54  VSQANQKQSRKREEKTEKNQP----KRVKNQNIMKINIHDFSEETLRLIEDWYNAELDPQ 113

Query: 100 AVI--QNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVT 159
            +     +    S P  KQLM +DV   Q RL L KE V   ++P     E+   G+ V+
Sbjct: 114 DIFGDDEVTRRFSRPIKKQLMSSDVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVS 173

Query: 160 VYDSEGREYDMIFKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFIS 202
           VY  +G    M FK W   K  VLT  W +F     L +  +F++
Sbjct: 174 VYGPDGEVQQMKFKMWNGDKTPVLTSGWMQFVADYGLLKTSDFVT 214

The following BLAST results are available for this feature:

BLAST of CSPI02G05500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR14	1.1e-18	44.04	Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZR15	1.6e-14	39.42	Putative B3 domain-containing protein At4g03160 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LM90	1.5e-09	27.27	B3 domain-containing protein At1g20600 OS=Arabidopsis thaliana OX=3702 GN=At1g20...	[more]

BLAST of CSPI02G05500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BAS8	1.3e-88	75.32	Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0L7L0	9.2e-82	70.80	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073910 PE=4 ...	[more]
A0A0A0LC65	9.8e-68	100.00	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G609250 PE=4 ...	[more]
A0A6J1CTE7	1.1e-34	39.08	putative B3 domain-containing protein At4g03170 OS=Momordica charantia OX=3673 G...	[more]
A0A4Y1RVH6	2.9e-27	47.54	AP2/B3-like transcriptional factor family protein OS=Prunus dulcis OX=3755 GN=Pr...	[more]

BLAST of CSPI02G05500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736688.1	3.9e-119	96.89	uncharacterized protein LOC116402065 [Cucumis sativus]	[more]
KAA0043114.1	2.7e-88	75.32	putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYJ96217.1 put...	[more]
KGN56101.1	1.9e-81	70.80	hypothetical protein Csa_010492 [Cucumis sativus]	[more]
KAG6589940.1	1.2e-43	46.90	putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7023605.1	2.3e-39	59.71	putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. ar...	[more]

BLAST of CSPI02G05500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03170.1	7.5e-20	44.04	AP2/B3-like transcriptional factor family protein	[more]
AT4G03160.1	1.1e-15	39.42	BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor f...	[more]
AT1G20600.1	1.1e-10	27.27	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 113..221 e-value: 3.1E-7 score: 40.0
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 113..219 e-value: 2.4E-9 score: 37.0
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 114..221 score: 9.629154
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 111..217 e-value: 1.91537E-15 score: 67.3529
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 103..224 e-value: 2.2E-20 score: 74.3
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 111..208
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 7..219
None	No IPR available	PANTHER	PTHR31541:SF28	B3 DOMAIN PLANT PROTEIN	coord: 7..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G05500.1	CSPI02G05500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding