CSPI02G05270 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G05270
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Translation initiation factor IF-3
Location	Chr2: 3739969 .. 3743100 (-)
RNA-Seq Expression	CSPI02G05270
Synteny	CSPI02G05270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAATATAGAGTTAGAGTGATGAGTCGACTCCAAAACTCAAAAACTATTGTGGATAAGATTTTTCCTTTTCTTTTTTCTTAAAAATTAATTAAAAAAGAATCCCCAAACTCCCTCCCACCACTGCCCCCTCCACAGCTCAAAGCTATGGCTGGGCTCTCCGGCAGTTTCCCTTTCAAATCTCTCTTATCCCAATCCTCCGCCGCTGCCACCACCACCTCCTCCTCCTCCGCCGCACCTCCCCCAACCTCCTCCTCTTCCACTACTCCCTTCCGAACCTCATTCCCCTCTCTTCCCATCTCCTCCTCTAATTCCAATGCTTTCAAATTCCGCCTTCACAAATCCAACTCTCTACGTCTCCTCTTTTCCTCTCCCGTTTCCTCTCCTATTCGTACTTCTGTATTTGCTCGACTCGGCGGCGCTCCTCGATCTTCTGGACCGCCTGATTCTAAGCGCTCTAACGATGAAATTGGTCTCGATATTTCCGCCATCAAGTTTGTGTCCTGTACTTGTACTAGTATGATTTATGGATTTTTTTTATATATTTGGAGTTCTTAATTGTTTGGTTGCGTTTTTTGTGATTTATTTGTACAGGTCAATTAATGTGAGGCTTATCGATGCTGAACAGAATATGGTAGGTGTATGGTTTGTGCTTTGGGAAATATATATGTGTGTGTGTGTGTGTGTTTGTCTGTTTCCTTTTGCTACAATGCAATACTTGTATGCTAGGTGTGGTAGTTTGAAACGTTCATGTTCTTATAATGAATAGGTTGGAGTTGTGTCGAAGGCCCAAGCCATTCAAATGGCTGAAGATGCTGAACTTGATTTGGTATGTCTTCTTGCATCGTTTGTTGTTAAAATAATTGTTTGTCTATGAATTCCAAAGAACCTTGCACCAAAATTTAATCGCCTTTTGAGGAAACATTGTATAGTTCATATTTCTTTTACTAAAAATGGAATTAAAAGCATATAATGATAAACTATTCGAAAAATTATAGATATAAGTTATAGCCTTTCATCCATAGCTAGAAGAACCATCGCATAGTGAATGGATTTCATTTCACAGCTGTGCATTAGGCCAATTTTACTGTTTGCTCTGATATAAAATTGTAATTTCCTTCTCCTATTTGTCAACACGAGACTTGGATAAATGCTGGATAATGCCTTGTTATTAAGATATATGATTAAAAATTTCTTAGAACCTTTGAGTTGTCTGGATGCTCCTGGTGCAATAAACGATGCTCATTTCACATTCTGTTTTTTACTTCTTAACTTGGATAAAGAAGGTCGGGGGCTAATATTTTTCCTGGAATCCTAATATTTTCGTTGCTTTATGTAAGGTTTAGCTAATTCTTTTTATTCCGTTCAGGTTGTAGTATCCCCTGATGCAGATCCTCCAGTTGTTAGAATAATGGATTACAAGTATGCCACTTTCTCTCTCTGGTTTCCCCATTCCCTCTATGCTTGTGGATAAGGTTGTATTTTGCTTGAGTTCAATGCCAATGTGATCAACTTTTATGATTAATTTCAATTCTTATGTTAAACATGTTGATGATATATTTTTACATTAATACTTTACTTTTAATTAAATGTTTCCGAGAAAGTATGGAAATATGGTGCAGTATAACGGTGACATAATGAAATAGGATGATTGTTATGTTGTTTTCACTGGGAGAATTGGAAGGCCACTTTTTTTTTTCCTTATTACTATTTTGTTACTTTTATGTTGAGAATTTTCTTTTCCCGTCTTTTGTTTCTCAGTAAATATAGGTATGAACTGCAAAAAAAGAAAAGAGGACAACAGAAGAAAAGTGCTGGTGAATCTCTTTTTTAATAGAGTCTGCATATTTTCTTTGGTACACAAATCTTTCAGATTTGTGGAAAGATACTGACAAAGTGTGGTTTTGAATGTTAGCAACTCGCATGGATTTGAAAGAGCTTAAAATGGGGTAACACATTCCTTCATCTCTCTGTCTCTTTTCTCTCTGGAGGTTTCCTTTTTTTTTCTTCTTTTTCTCGACTTAAAGCCACTTGAACTTGTGGCGTCTAAGATCAATAATCACCCAGCCTGCAAAAGCAAAGAGACATGAGAGACCTTTGTCTGCTCTTTCAGAAACATTTATGCACATGTTCCTTTTCTCAATCTCGACCTTCTGGTTGTTATTATTGTTGCACAGTTATAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCGAAGAAATTTTTAAAAGACGGTGACAAGGTTTCTTATCACATCTTCTATATCTTTCATCTTCTTTTCATGCATCCAGATATATCGTAATAGTTTGTCTGAATCACTTTGGAAGTCTTTTATCGAATATTGTAGGTTAAAGTTATAGTGAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGGGAGGTATTTATGTTGTATCAATTTTGTCTCGACTTCAATATCTGTTCATCACGGCAATACTAGAGAAAATGATTGCCCATTGTCCCTTATTGTGGTCTTGTTACTCAATACTGCAAATAATGGTTGTTTTATAGAACCATTTTTTTTAAAAGAATGCTTAGAACCTAAAACATTGTGATCATATTGCTTGTTTGTCTTGTTTCTTTCCTATTTGTGTCTGCTAATCTCTCTTTATCCCATATCCGTGCTTTGGGTTAATACCTGAAACCAAGTCTTACCTTCTCTTTATTTATCTCTCTTCCCCATTGACGTTCTCGTTATTTTATTATACACAGCTTGCAACTGAAGAGGCCAAGAACTTCAGAGACAGGAATATATTTATTGTTCTAGTCCCTAACAAGGCTGTTCTTCAAAAGGCTCAAGAACCTCCCAAGAAAAAAGATAAACCTGCAGTTAATGGAGTTTCTGCCAGTGTTTAGTCAAGCTTTCGCCAAAAATAGATGGGTTAGTTGCAACATTCTAAATCTTCTTCTACCATAGAGAAAATTTGAGAGATTAAATGTATAATGTTTTTGTTTAATCTTATGCATCAAACTGTTGTTCGTTCTATTTTTTTAGTGGAATGTTTAGAAATCAGATGTGTTACTAATTCTTTAGAAAACATCAATTCATATAACCATCCTTTGCT

mRNA sequence

AGGAATATAGAGTTAGAGTGATGAGTCGACTCCAAAACTCAAAAACTATTGTGGATAAGATTTTTCCTTTTCTTTTTTCTTAAAAATTAATTAAAAAAGAATCCCCAAACTCCCTCCCACCACTGCCCCCTCCACAGCTCAAAGCTATGGCTGGGCTCTCCGGCAGTTTCCCTTTCAAATCTCTCTTATCCCAATCCTCCGCCGCTGCCACCACCACCTCCTCCTCCTCCGCCGCACCTCCCCCAACCTCCTCCTCTTCCACTACTCCCTTCCGAACCTCATTCCCCTCTCTTCCCATCTCCTCCTCTAATTCCAATGCTTTCAAATTCCGCCTTCACAAATCCAACTCTCTACGTCTCCTCTTTTCCTCTCCCGTTTCCTCTCCTATTCGTACTTCTGTATTTGCTCGACTCGGCGGCGCTCCTCGATCTTCTGGACCGCCTGATTCTAAGCGCTCTAACGATGAAATTGGTCTCGATATTTCCGCCATCAAGTCAATTAATGTGAGGCTTATCGATGCTGAACAGAATATGGTTGGAGTTGTGTCGAAGGCCCAAGCCATTCAAATGGCTGAAGATGCTGAACTTGATTTGGTTGTAGTATCCCCTGATGCAGATCCTCCAGTTGTTAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAAAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAACTCGCATGGATTTGAAAGAGCTTAAAATGGGTTATAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCGAAGAAATTTTTAAAAGACGGTGACAAGGTTAAAGTTATAGTGAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGGGAGCTTGCAACTGAAGAGGCCAAGAACTTCAGAGACAGGAATATATTTATTGTTCTAGTCCCTAACAAGGCTGTTCTTCAAAAGGCTCAAGAACCTCCCAAGAAAAAAGATAAACCTGCAGTTAATGGAGTTTCTGCCAGTGTTTAGTCAAGCTTTCGCCAAAAATAGATGGGTTAGTTGCAACATTCTAAATCTTCTTCTACCATAGAGAAAATTTGAGAGATTAAATGTATAATGTTTTTGTTTAATCTTATGCATCAAACTGTTGTTCGTTCTATTTTTTTAGTGGAATGTTTAGAAATCAGATGTGTTACTAATTCTTTAGAAAACATCAATTCATATAACCATCCTTTGCT

Coding sequence (CDS)

ATGGCTGGGCTCTCCGGCAGTTTCCCTTTCAAATCTCTCTTATCCCAATCCTCCGCCGCTGCCACCACCACCTCCTCCTCCTCCGCCGCACCTCCCCCAACCTCCTCCTCTTCCACTACTCCCTTCCGAACCTCATTCCCCTCTCTTCCCATCTCCTCCTCTAATTCCAATGCTTTCAAATTCCGCCTTCACAAATCCAACTCTCTACGTCTCCTCTTTTCCTCTCCCGTTTCCTCTCCTATTCGTACTTCTGTATTTGCTCGACTCGGCGGCGCTCCTCGATCTTCTGGACCGCCTGATTCTAAGCGCTCTAACGATGAAATTGGTCTCGATATTTCCGCCATCAAGTCAATTAATGTGAGGCTTATCGATGCTGAACAGAATATGGTTGGAGTTGTGTCGAAGGCCCAAGCCATTCAAATGGCTGAAGATGCTGAACTTGATTTGGTTGTAGTATCCCCTGATGCAGATCCTCCAGTTGTTAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAAAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAACTCGCATGGATTTGAAAGAGCTTAAAATGGGTTATAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCGAAGAAATTTTTAAAAGACGGTGACAAGGTTAAAGTTATAGTGAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGGGAGCTTGCAACTGAAGAGGCCAAGAACTTCAGAGACAGGAATATATTTATTGTTCTAGTCCCTAACAAGGCTGTTCTTCAAAAGGCTCAAGAACCTCCCAAGAAAAAAGATAAACCTGCAGTTAATGGAGTTTCTGCCAGTGTTTAG

Protein sequence

MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV*

Homology

[Close]

BLAST of CSPI02G05270 vs. ExPASy Swiss-Prot
Match: Q94B52 (Translation initiation factor IF3-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IF3-4 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 8.7e-77
Identity = 154/214 (71.96%), Postives = 182/214 (85.05%), Query Frame = 0


Query: 90  GGAPRSSGPPD----SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDA 149
           GG   S  P D     K S D+  LDISAI+S  VRLID +QNM+G+VSK +A++ AEDA
Sbjct: 62  GGGGGSRFPGDRRGRQKESEDDDSLDISAIRSATVRLIDDQQNMIGLVSKEEAVRRAEDA 121

Query: 150 ELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY 209
           ELDLV++SPDADPPVVR+MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDY
Sbjct: 122 ELDLVILSPDADPPVVRMMDYSKYRYEQQKRKKEQQKKT--TRMDLKELKMGYNIDQHDY 181

Query: 210 SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRN 269
           SVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN
Sbjct: 182 SVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGELGTEESKNFRDRN 241

Query: 270 IFIVLVPNKAVLQKAQE-PPKKKDKPAVNGVSAS 299
           +FIVLVPNK V++K QE PPKKK KPA + VSA+
Sbjct: 242 LFIVLVPNKEVIRKVQEPPPKKKKKPADDKVSAA 273

[Close]

BLAST of CSPI02G05270 vs. ExPASy Swiss-Prot
Match: O82234 (Translation initiation factor IF3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IF3-2 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.5e-73
Identity = 163/275 (59.27%), Postives = 205/275 (74.55%), Query Frame = 0


Query: 36  SSSTTPFRTSFPSLPISSSNSNAF----KFRLHKSNSLRLLFSSPVSSPIR----TSVFA 95
           +SST  F   F  +  + S+ + F    K    + +   L F++   SP R    T  F 
Sbjct: 5   TSSTVGFNAVFTGITKTVSSHSLFSVDSKLCSLRLSKTELSFTNLTPSPRRAFAVTCRFG 64

Query: 96  RLGGAPRSSGPPDSKRSND---EIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAED 155
             GG  R SG     R  +   +  LDIS+I+S  VRLID +QNM+G+VSK +A++MA+D
Sbjct: 65  GGGGGYRFSGDNRRGRPKEAEIDEALDISSIRSATVRLIDGQQNMLGLVSKDEAVRMADD 124

Query: 156 AELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD 215
           AELDLV++SPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHD
Sbjct: 125 AELDLVILSPDADPPVVKMMDYSKYRYEQQKRKKDQQKKT--TRMDLKELKMGYNIDQHD 184

Query: 216 YSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDR 275
           YSVRL+AA+KFL+DGDKVKVIV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDR
Sbjct: 185 YSVRLRAAQKFLQDGDKVKVIVSMKGRENEFRNIAIELLRRFQTEIGELATEESKNFRDR 244

Query: 276 NIFIVLVPNKAVLQKAQEPP-KKKDKPAVNGVSAS 299
           N+FI+LVPNK +++K QEPP +KK K A N  SAS
Sbjct: 245 NMFIILVPNKEMIRKPQEPPTRKKKKTAENEASAS 277

[Close]

BLAST of CSPI02G05270 vs. ExPASy Swiss-Prot
Match: B0JKQ1 (Translation initiation factor IF-3 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=infC PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.5e-31
Identity = 72/176 (40.91%), Postives = 118/176 (67.05%), Query Frame = 0


Query: 100 DSKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPP 159
           D +R+  ++      I+   +R+ID++ + +G+++ A+A+++AE+ ELDLV+VS  A PP
Sbjct: 3   DKRRTTRDLPQINERIRFPEIRVIDSDGSQLGIITPAEALRVAEEKELDLVLVSETASPP 62

Query: 160 VVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDG 219
           V RIMDY KY++E +KK R  +KK      D+KE+KM Y ID+HDY+VR+  A++FLK G
Sbjct: 63  VCRIMDYGKYKFEQEKKAREAKKKQHTA--DIKEVKMRYKIDEHDYNVRVNQAQRFLKAG 122

Query: 220 DKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK 275
           DKVK  +  +GRE +  N+A EL+ R  +++ ++A  ++A     RN+ ++L P K
Sbjct: 123 DKVKATITFRGREIQHSNLAEELLARMAKDLQDVAEVQQAPKKEGRNMMMMLSPKK 176

[Close]

BLAST of CSPI02G05270 vs. ExPASy Swiss-Prot
Match: Q0IDZ5 (Translation initiation factor IF-3 OS=Synechococcus sp. (strain CC9311) OX=64471 GN=infC PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.7e-30
Identity = 79/175 (45.14%), Postives = 115/175 (65.71%), Query Frame = 0


Query: 120 VRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRG 179
           +R++DA+   +GV+ + QA+++A + ELDLV+VS  ADPPV RIMDY K+++E +KK + 
Sbjct: 28  LRVVDADGEQLGVIDREQALEVARERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKE 87

Query: 180 QQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIA 239
            +KKS  T  ++KE+KM Y IDQHDY VR+  A++FLK GDKVK  V  +GRE +   +A
Sbjct: 88  AKKKSHQT--EVKEVKMRYKIDQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALA 147

Query: 240 IELIRRFQEEVGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDKPAVN 294
             L+RR  +++ E A  +    R+ RN+ + L P KA L K     K KD+  VN
Sbjct: 148 EVLLRRMAKDLEEPAEVQQPPKREGRNMIMFLTPRKAPLVK-----KDKDEEVVN 195

[Close]

BLAST of CSPI02G05270 vs. ExPASy Swiss-Prot
Match: A5GI06 (Translation initiation factor IF-3 OS=Synechococcus sp. (strain WH7803) OX=32051 GN=infC PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.6e-30
Identity = 77/177 (43.50%), Postives = 116/177 (65.54%), Query Frame = 0


Query: 120 VRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRG 179
           +R++DA+   +GV+ + +A+++A++ ELDLV+VS  ADPPV RIMDY KY++E +KK + 
Sbjct: 28  LRVVDADGTQLGVIDREKALEVAQERELDLVLVSEKADPPVCRIMDYGKYKFEQEKKAKE 87

Query: 180 QQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIA 239
            +KKS  T  ++KE+KM Y IDQHDY VR+  A++FLK GDKVK  V  +GRE +   +A
Sbjct: 88  AKKKSHQT--EVKEVKMRYKIDQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALA 147

Query: 240 IELIRRFQEEVGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGV 296
             L+RR  +++ E A  +    R+ RN+ + L P K  L K  +    K++PA   V
Sbjct: 148 ETLLRRMAKDLEEPAEIQQPPKREGRNMIMFLTPRKTPLVKKDD----KEEPATRAV 198

[Close]

BLAST of CSPI02G05270 vs. ExPASy TrEMBL
Match: A0A0A0LH34 (Translation initiation factor IF-3 OS=Cucumis sativus OX=3659 GN=Csa_2G036070 PE=3 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.5e-152
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK 60
           MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK
Sbjct: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK 60

Query: 61  FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV 120
           FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV
Sbjct: 61  FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV 120

Query: 121 RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180
           RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ
Sbjct: 121 RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180

Query: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240
           QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI
Sbjct: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240

Query: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV 300
           ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV
Sbjct: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV 299

[Close]

BLAST of CSPI02G05270 vs. ExPASy TrEMBL
Match: A0A1S3BV82 (Translation initiation factor IF-3 OS=Cucumis melo OX=3656 GN=LOC103493630 PE=3 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 4.9e-139
Identity = 280/300 (93.33%), Postives = 288/300 (96.00%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSS-NSNAF 60
           MAGLSGSFPFKSLLSQSSAA+TTTS ++A   PTSSSSTTPFRTS PSLPISSS NSNAF
Sbjct: 1   MAGLSGSFPFKSLLSQSSAASTTTSPAAA---PTSSSSTTPFRTSTPSLPISSSFNSNAF 60

Query: 61  KFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSIN 120
           K RLHKSNSLRL+FS PVSSPIRTSVFARLGGAPRSSGPPDSKRSNDE GLD+SAI+S N
Sbjct: 61  KLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEFGLDVSAIRSNN 120

Query: 121 VRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRG 180
           VRLIDA+QNMVGVVSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRG
Sbjct: 121 VRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRG 180

Query: 181 QQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIA 240
           QQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIA
Sbjct: 181 QQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIA 240

Query: 241 IELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV 300
           IELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA V
Sbjct: 241 IELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV 297

[Close]

BLAST of CSPI02G05270 vs. ExPASy TrEMBL
Match: A0A6J1DYM5 (Translation initiation factor IF-3 OS=Momordica charantia OX=3673 GN=LOC111024717 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.9e-122
Identity = 248/299 (82.94%), Postives = 269/299 (89.97%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK 60
           MAGL+  FPFK LLSQSSA    T+SS+AA   +S+++  PFRTS   LP+SSS SNAF 
Sbjct: 1   MAGLTSRFPFKPLLSQSSA----TTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFG 60

Query: 61  FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV 120
           FRLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP DSKRS+D+ GLD+SAI+S NV
Sbjct: 61  FRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNV 120

Query: 121 RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180
           RLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQ
Sbjct: 121 RLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQ 180

Query: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240
           QKKSAATRMDLKELKMGYNIDQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAI
Sbjct: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAI 240

Query: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV 300
           ELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+N VSA V
Sbjct: 241 ELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV 291

[Close]

BLAST of CSPI02G05270 vs. ExPASy TrEMBL
Match: A0A6J1G3Y5 (Translation initiation factor IF-3 OS=Cucurbita moschata OX=3662 GN=LOC111450575 PE=3 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 9.9e-116
Identity = 239/300 (79.67%), Postives = 262/300 (87.33%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK 60
           MAGLSG FPFKS+ SQSSA AT T+++S      SSSS TPFRTS   LP+ SS SNAF+
Sbjct: 1   MAGLSGRFPFKSISSQSSATATATTTTS------SSSSATPFRTSIFPLPLPSSKSNAFR 60

Query: 61  FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV 120
           FRLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  SKRS D + LD+S+I+S NV
Sbjct: 61  FRLHNSNSLRL-----VSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALDVSSIRSNNV 120

Query: 121 RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180
           RLID +QNMVG+V K+QAIQMAEDAELDLVV+SPDADPPVVRIMDY+KYRY+LQKKKR Q
Sbjct: 121 RLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQ 180

Query: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240
           QKKSAATRMDLKELKMGY IDQHDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAI
Sbjct: 181 QKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAI 240

Query: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNGVSASV 300
           EL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVN VSA V
Sbjct: 241 ELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARV 289

[Close]

BLAST of CSPI02G05270 vs. ExPASy TrEMBL
Match: A0A6J1KDY9 (Translation initiation factor IF-3 OS=Cucurbita maxima OX=3661 GN=LOC111493999 PE=3 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 1.1e-114
Identity = 238/300 (79.33%), Postives = 258/300 (86.00%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK 60
           MAGLSG FPFKS+ SQSSA AT T+S        SSSS TPFRTS   LP  SS SNA +
Sbjct: 1   MAGLSGRFPFKSISSQSSATATATTS--------SSSSATPFRTSIFPLPFPSSKSNAVR 60

Query: 61  FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV 120
           FRLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  SKRS D + LD+S+I+S NV
Sbjct: 61  FRLHSSNSLRL-----VSSPIRTSVFARYGGAPRSSGPTGSKRSEDSLALDVSSIRSNNV 120

Query: 121 RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180
           RLID +QNMVG+V K+QAIQMAEDAELDLVV+SPDADPPVVRIMDY+KYRY+LQKKKR Q
Sbjct: 121 RLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQ 180

Query: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240
           QKKSAATRMDLKELKMGY IDQHDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAI
Sbjct: 181 QKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAI 240

Query: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNGVSASV 300
           EL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVN VSA V
Sbjct: 241 ELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSAGV 287

[Close]

BLAST of CSPI02G05270 vs. NCBI nr
Match: XP_004144726.1 (translation initiation factor IF3-4, chloroplastic [Cucumis sativus] >KGN61058.1 hypothetical protein Csa_021304 [Cucumis sativus])

HSP 1 Score: 546.6 bits (1407), Expect = 1.4e-151
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK 60
           MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK
Sbjct: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK 60

Query: 61  FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV 120
           FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV
Sbjct: 61  FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV 120

Query: 121 RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180
           RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ
Sbjct: 121 RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180

Query: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240
           QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI
Sbjct: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240

Query: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV 300
           ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV
Sbjct: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV 299

[Close]

BLAST of CSPI02G05270 vs. NCBI nr
Match: XP_008452687.1 (PREDICTED: translation initiation factor IF-3 [Cucumis melo])

HSP 1 Score: 503.8 bits (1296), Expect = 1.0e-138
Identity = 280/300 (93.33%), Postives = 288/300 (96.00%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSS-NSNAF 60
           MAGLSGSFPFKSLLSQSSAA+TTTS ++A   PTSSSSTTPFRTS PSLPISSS NSNAF
Sbjct: 1   MAGLSGSFPFKSLLSQSSAASTTTSPAAA---PTSSSSTTPFRTSTPSLPISSSFNSNAF 60

Query: 61  KFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSIN 120
           K RLHKSNSLRL+FS PVSSPIRTSVFARLGGAPRSSGPPDSKRSNDE GLD+SAI+S N
Sbjct: 61  KLRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEFGLDVSAIRSNN 120

Query: 121 VRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRG 180
           VRLIDA+QNMVGVVSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRG
Sbjct: 121 VRLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRG 180

Query: 181 QQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIA 240
           QQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIA
Sbjct: 181 QQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIA 240

Query: 241 IELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV 300
           IELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA V
Sbjct: 241 IELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV 297

[Close]

BLAST of CSPI02G05270 vs. NCBI nr
Match: XP_038891171.1 (translation initiation factor IF3-4, chloroplastic [Benincasa hispida])

HSP 1 Score: 464.9 bits (1195), Expect = 5.2e-127
Identity = 260/300 (86.67%), Postives = 277/300 (92.33%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK 60
           MAGLSG FPFK LLSQS+  ATTTS+++A    TSSSS TPFRTS   LP+SSS +NAFK
Sbjct: 1   MAGLSGRFPFKPLLSQST-TATTTSAAAA----TSSSSATPFRTSIRPLPLSSSKANAFK 60

Query: 61  FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV 120
           FRL KSNSLRL+ S PVSSPIRTSVF+R GGAPRSSGP DSKRS+DE GLD+SAI+S NV
Sbjct: 61  FRLRKSNSLRLVVSFPVSSPIRTSVFSRYGGAPRSSGPADSKRSDDEFGLDVSAIRSNNV 120

Query: 121 RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180
           RLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQ
Sbjct: 121 RLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQ 180

Query: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240
           QKKSAATRMDLKELKMGYNIDQHDYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAI
Sbjct: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAI 240

Query: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNGVSASV 300
           ELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQE PPKKKDKPAVN VSA V
Sbjct: 241 ELIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEQPPKKKDKPAVNEVSAGV 295

[Close]

BLAST of CSPI02G05270 vs. NCBI nr
Match: XP_022158178.1 (translation initiation factor IF3-4, chloroplastic [Momordica charantia] >XP_022158179.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia])

HSP 1 Score: 448.7 bits (1153), Expect = 3.8e-122
Identity = 248/299 (82.94%), Postives = 269/299 (89.97%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK 60
           MAGL+  FPFK LLSQSSA    T+SS+AA   +S+++  PFRTS   LP+SSS SNAF 
Sbjct: 1   MAGLTSRFPFKPLLSQSSA----TTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFG 60

Query: 61  FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV 120
           FRLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP DSKRS+D+ GLD+SAI+S NV
Sbjct: 61  FRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNV 120

Query: 121 RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180
           RLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQ
Sbjct: 121 RLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQ 180

Query: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240
           QKKSAATRMDLKELKMGYNIDQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAI
Sbjct: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAI 240

Query: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV 300
           ELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+N VSA V
Sbjct: 241 ELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV 291

[Close]

BLAST of CSPI02G05270 vs. NCBI nr
Match: XP_023547209.1 (translation initiation factor IF3-4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 426.8 bits (1096), Expect = 1.6e-115
Identity = 239/300 (79.67%), Postives = 261/300 (87.00%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK 60
           MAGLSG FPFKS+ SQSSA AT T+S        SSSS TPFRTS   LP+ SS SNAF+
Sbjct: 1   MAGLSGRFPFKSISSQSSATATATTS--------SSSSATPFRTSIFPLPLPSSKSNAFR 60

Query: 61  FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV 120
           FRLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  SKRS D + LD+S+I+S NV
Sbjct: 61  FRLHNSNSLRL-----VSSPIRTSVFARYGGAPRSSGPTGSKRSEDSLALDVSSIRSNNV 120

Query: 121 RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180
           RLID +QNMVG+V K+QAIQMAEDAELDLVV+SPDADPPVVRIMDY+KYRY+LQKKKR Q
Sbjct: 121 RLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQ 180

Query: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240
           QKKSAATRMDLKELKMGY IDQHDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAI
Sbjct: 181 QKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAI 240

Query: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNGVSASV 300
           EL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVN VSA+V
Sbjct: 241 ELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSAAV 287

[Close]

BLAST of CSPI02G05270 vs. TAIR 10
Match: AT4G30690.1 (Translation initiation factor 3 protein )

HSP 1 Score: 288.5 bits (737), Expect = 6.2e-78
Identity = 154/214 (71.96%), Postives = 182/214 (85.05%), Query Frame = 0


Query: 90  GGAPRSSGPPD----SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDA 149
           GG   S  P D     K S D+  LDISAI+S  VRLID +QNM+G+VSK +A++ AEDA
Sbjct: 62  GGGGGSRFPGDRRGRQKESEDDDSLDISAIRSATVRLIDDQQNMIGLVSKEEAVRRAEDA 121

Query: 150 ELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY 209
           ELDLV++SPDADPPVVR+MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDY
Sbjct: 122 ELDLVILSPDADPPVVRMMDYSKYRYEQQKRKKEQQKKT--TRMDLKELKMGYNIDQHDY 181

Query: 210 SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRN 269
           SVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN
Sbjct: 182 SVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGELGTEESKNFRDRN 241

Query: 270 IFIVLVPNKAVLQKAQE-PPKKKDKPAVNGVSAS 299
           +FIVLVPNK V++K QE PPKKK KPA + VSA+
Sbjct: 242 LFIVLVPNKEVIRKVQEPPPKKKKKPADDKVSAA 273

[Close]

BLAST of CSPI02G05270 vs. TAIR 10
Match: AT2G24060.1 (Translation initiation factor 3 protein )

HSP 1 Score: 276.2 bits (705), Expect = 3.2e-74
Identity = 163/275 (59.27%), Postives = 205/275 (74.55%), Query Frame = 0


Query: 36  SSSTTPFRTSFPSLPISSSNSNAF----KFRLHKSNSLRLLFSSPVSSPIR----TSVFA 95
           +SST  F   F  +  + S+ + F    K    + +   L F++   SP R    T  F 
Sbjct: 5   TSSTVGFNAVFTGITKTVSSHSLFSVDSKLCSLRLSKTELSFTNLTPSPRRAFAVTCRFG 64

Query: 96  RLGGAPRSSGPPDSKRSND---EIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAED 155
             GG  R SG     R  +   +  LDIS+I+S  VRLID +QNM+G+VSK +A++MA+D
Sbjct: 65  GGGGGYRFSGDNRRGRPKEAEIDEALDISSIRSATVRLIDGQQNMLGLVSKDEAVRMADD 124

Query: 156 AELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD 215
           AELDLV++SPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHD
Sbjct: 125 AELDLVILSPDADPPVVKMMDYSKYRYEQQKRKKDQQKKT--TRMDLKELKMGYNIDQHD 184

Query: 216 YSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDR 275
           YSVRL+AA+KFL+DGDKVKVIV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDR
Sbjct: 185 YSVRLRAAQKFLQDGDKVKVIVSMKGRENEFRNIAIELLRRFQTEIGELATEESKNFRDR 244

Query: 276 NIFIVLVPNKAVLQKAQEPP-KKKDKPAVNGVSAS 299
           N+FI+LVPNK +++K QEPP +KK K A N  SAS
Sbjct: 245 NMFIILVPNKEMIRKPQEPPTRKKKKTAENEASAS 277

[Close]

BLAST of CSPI02G05270 vs. TAIR 10
Match: AT4G30690.2 (Translation initiation factor 3 protein )

HSP 1 Score: 235.3 bits (599), Expect = 6.2e-62
Identity = 131/214 (61.21%), Postives = 156/214 (72.90%), Query Frame = 0


Query: 90  GGAPRSSGPPD----SKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDA 149
           GG   S  P D     K S D+  LDISAI+S  VRLID +QNM+G+VSK +A++ AEDA
Sbjct: 62  GGGGGSRFPGDRRGRQKESEDDDSLDISAIRSATVRLIDDQQNMIGLVSKEEAVRRAEDA 121

Query: 150 ELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY 209
           ELDLV++SPDADPPVVR+MDY+                              YNIDQHDY
Sbjct: 122 ELDLVILSPDADPPVVRMMDYS------------------------------YNIDQHDY 181

Query: 210 SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRN 269
           SVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN
Sbjct: 182 SVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGELGTEESKNFRDRN 241

Query: 270 IFIVLVPNKAVLQKAQE-PPKKKDKPAVNGVSAS 299
           +FIVLVPNK V++K QE PPKKK KPA + VSA+
Sbjct: 242 LFIVLVPNKEVIRKVQEPPPKKKKKPADDKVSAA 245

[Close]

BLAST of CSPI02G05270 vs. TAIR 10
Match: AT1G34360.1 (translation initiation factor 3 (IF-3) family protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-08
Identity = 60/191 (31.41%), Postives = 96/191 (50.26%), Query Frame = 0


Query: 100 DSKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPP 159
           D  R N++I  D        VRL+  E +   VVS  +A++ A++ + DLV V  DA PP
Sbjct: 82  DGPRLNEKITGDY-------VRLVSEEGHC--VVSLREALRRAKELQCDLVEVQRDAKPP 141

Query: 160 VVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLK 219
           V +I+ Y+   Y+  K  K+R + K++ A R D+KE++    I+  D   +   A K ++
Sbjct: 142 VCKIVKYSLELYKKAKVGKERAKAKRAEAIRPDIKEIRFTPKIEAKDLKFKSDQALKLME 201

Query: 220 DGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKA 279
            G +VK + V  K +  E      +EL+ RF   +G+ A  E+    DR   +V+V +  
Sbjct: 202 SGYRVKCLAVPDKDKHKELEPEKLLELLFRFTCFIGD-ALVESWPEADRKGAVVIVRHAK 257

Query: 280 VLQKAQEPPKK 287
                  PPKK
Sbjct: 262 F-----GPPKK 257

The following BLAST results are available for this feature:

BLAST of CSPI02G05270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94B52	8.7e-77	71.96	Translation initiation factor IF3-4, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
O82234	4.5e-73	59.27	Translation initiation factor IF3-2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
B0JKQ1	5.5e-31	40.91	Translation initiation factor IF-3 OS=Microcystis aeruginosa (strain NIES-843) O...	[more]
Q0IDZ5	2.7e-30	45.14	Translation initiation factor IF-3 OS=Synechococcus sp. (strain CC9311) OX=64471...	[more]
A5GI06	3.6e-30	43.50	Translation initiation factor IF-3 OS=Synechococcus sp. (strain WH7803) OX=32051...	[more]

BLAST of CSPI02G05270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH34	6.5e-152	100.00	Translation initiation factor IF-3 OS=Cucumis sativus OX=3659 GN=Csa_2G036070 PE...	[more]
A0A1S3BV82	4.9e-139	93.33	Translation initiation factor IF-3 OS=Cucumis melo OX=3656 GN=LOC103493630 PE=3 ...	[more]
A0A6J1DYM5	1.9e-122	82.94	Translation initiation factor IF-3 OS=Momordica charantia OX=3673 GN=LOC11102471...	[more]
A0A6J1G3Y5	9.9e-116	79.67	Translation initiation factor IF-3 OS=Cucurbita moschata OX=3662 GN=LOC111450575...	[more]
A0A6J1KDY9	1.1e-114	79.33	Translation initiation factor IF-3 OS=Cucurbita maxima OX=3661 GN=LOC111493999 P...	[more]

BLAST of CSPI02G05270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144726.1	1.4e-151	100.00	translation initiation factor IF3-4, chloroplastic [Cucumis sativus] >KGN61058.1...	[more]
XP_008452687.1	1.0e-138	93.33	PREDICTED: translation initiation factor IF-3 [Cucumis melo]	[more]
XP_038891171.1	5.2e-127	86.67	translation initiation factor IF3-4, chloroplastic [Benincasa hispida]	[more]
XP_022158178.1	3.8e-122	82.94	translation initiation factor IF3-4, chloroplastic [Momordica charantia] >XP_022...	[more]
XP_023547209.1	1.6e-115	79.67	translation initiation factor IF3-4, chloroplastic-like [Cucurbita pepo subsp. p...	[more]

BLAST of CSPI02G05270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30690.1	6.2e-78	71.96	Translation initiation factor 3 protein	[more]
AT2G24060.1	3.2e-74	59.27	Translation initiation factor 3 protein	[more]
AT4G30690.2	6.2e-62	61.21	Translation initiation factor 3 protein	[more]
AT1G34360.1	1.8e-08	31.41	translation initiation factor 3 (IF-3) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019815	Translation initiation factor 3, C-terminal	PFAM	PF00707	IF3_C	coord: 190..273 e-value: 4.4E-23 score: 81.0
IPR019814	Translation initiation factor 3, N-terminal	PFAM	PF05198	IF3_N	coord: 114..178 e-value: 2.3E-25 score: 88.6
IPR001288	Translation initiation factor 3	TIGRFAM	TIGR00168	TIGR00168	coord: 114..274 e-value: 3.0E-47 score: 158.3
IPR001288	Translation initiation factor 3	PANTHER	PTHR10938	TRANSLATION INITIATION FACTOR IF-3	coord: 52..290
IPR001288	Translation initiation factor 3	HAMAP	MF_00080	IF_3	coord: 92..275 score: 22.629017
IPR036788	Translation initiation factor 3 (IF-3), C-terminal domain superfamily	GENE3D	3.30.110.10		coord: 179..275 e-value: 1.8E-23 score: 84.4
IPR036788	Translation initiation factor 3 (IF-3), C-terminal domain superfamily	SUPERFAMILY	55200	Translation initiation factor IF3, C-terminal domain	coord: 189..274
IPR036787	Translation initiation factor 3 (IF-3), N-terminal domain superfamily	GENE3D	3.10.20.80		coord: 113..178 e-value: 5.5E-27 score: 95.6
IPR036787	Translation initiation factor 3 (IF-3), N-terminal domain superfamily	SUPERFAMILY	54364	Translation initiation factor IF3, N-terminal domain	coord: 115..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..47
None	No IPR available	PANTHER	PTHR10938:SF3	TRANSLATION INITIATION FACTOR IF3-2, CHLOROPLASTIC	coord: 52..290
IPR019813	Translation initiation factor 3, conserved site	PROSITE	PS00938	IF3	coord: 162..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G05270.1	CSPI02G05270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032790	ribosome disassembly
biological_process	GO:0006413	translational initiation
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003743	translation initiation factor activity