CSPI02G05250 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G05250
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	F-box protein
Location	Chr2: 3731771 .. 3733997 (+)
RNA-Seq Expression	CSPI02G05250
Synteny	CSPI02G05250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTAGTTGAAAATGGTTTTTGCAACTTTTTCGATTAAGAAAAGGGTCGGTTGAGACTATCTCCATTCTCACGCCAAATGATCGGATTGCGCTTTTGCTTCTACTCCGCGCATCTCAACGAAAACTCCAAACGAAAAGAAAAATAAAAACCTCTATTTCCTTTCTTCATTCCTAAATTTATTTCTAAGGTCACCCAAAAAATGGCGGAGCCGTCACCATGGGCGGAGCTGACTCACGAGTGTCTAACCAACATCCTCTCTCGTCTAACCATGGAGCAGCGGTGGCGCGGCCCTATGCTCGTTTGCAAACACTGGTTCCGTGCCGCCACGGATCCTTCTCTTTTTTCACACTTCGATCTCGAAAAAAGGTTCGAGTCTGCCCCCACCGAGCCTCCGGCCTGGTGGTTGCCGGAGTTCGAGACCAAAATTGATTCCATGCTCCGATCTGCCGTCCGTTGGAGCCTTGGATCTCTTTCAGTTATTCGGATTAGACACTGCTCCGATTCTTCTCTCGATTTAGTCGCTCAAGGGTAATTAAATTAACTTTTCTTCTTTTAATACTAATTTTAATTTTATTGTTGGGGCCAAAAATGGAGCTTTATTGTTTGGTTATTAGGGTAGAAGATTTCATTTTTATTCTTCTCATATTTTTTTTATTCAGCAAGCATCTTGATTGTGAGTTTTTTGTTTTCATTTTATAATTAAGTTAAGCATTATCACTTGATTTTTGCATCTGCTTTCAATTTTCAACAATCGATGTGCAGTTTTTTAGAATTAAAATTGTTGGGTTCCTCATTCAAGATGGGTTTTTTTAGGATGGTGGATGGGATGGGATGGGATGAATTTAGAAATTCTAATTGGTTAGGGATGTACCTTATAGAAAGGATTCCTTGTTTTGGAAACATGGTTTTTTTTTTTCAATTCATAAATATTTCATGGAATTTGATGTTCTCATAAATAGTCCACTTAGGGACTACGAGGATCTTTCTCAAACAATAGGGAATGAATTCTAATAGTAAACCATATGAACTCAATTTGAACTTTTTCCATATCGTATGGATAGTTTAATTGCAAAAAAAAGCAATTTCTAAAGATTGTTTGGATTGATTTTTTAAGTGCTTAGGAGTGTTTTTCAAGAGAGAAAAAATAGTGTTTTTAAAAGTCCATACAGAGTTTTGACTCTAAATAGTCGATGAGGTCATGAGTATGGGCTTTGCAACAAAAATGGCTGTAGAATCTGGCATTGGAGATGAGTAAGATAGCATGGACACTAGGGATTATCAAAAGGGAAAAGGAAATCATATTATGGGTTGGCATATATTGATGGCTTTCAACTTACTTCACATTTTAGATGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCGCCAATGTTACTGATAGATCAATGGCTAAGATTGCTTTTGGCTGCCAAAAGCTCCGGGAAGTAGATATCAGCTACTGTCACGAAATCTCAAACGTGTCTTTGGCATTAATCGGCAGGCATTGTCCAAATATCAAGACTCTAAAACGAAACTTTTTTAACAATCTAGATCCTTCCCAACATAAGGGAATTGTCCCTGACAATTATCTAGATGCCCGCCCACAAGATGTGGATTCAGAAGCTGCCGCTATTGCAAAATTCATGCACAACTTGGAGTACCTTGAACTCGGTTTCTCTAAACTATCAGCTAAAGCTCTAACTTTGATCTGTGAAGGATGTCCTAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACCAGCCGAGATATAATGAATGCTACATCAAGTTTGGAGCATTTGGAGATTAGGAAACCAAATTTCTACATTCCAAGGTCGGTCTTTCACACGGAGAGGTATGATCATTGGAGGTTGTATGATGAGAGATTCCAAACTGATATTTTCCGAATTTGATGATTCTGCAAGTGCACTTTTAATACTATATGTATAGCTGCACTTAGAAACCAAGTTTAATGTTGCTTTCCTAAGTTGTACAGTTTTTAATTTACCTGTTCTGTTTTATGACAGTTACAAGTCTGTATTATATTTGTAACTTGTATGGTGGACTGATGTGGCACAAGGTTGGTACTCTTGTAGTTATTGTTATGGGTTTCAGGTTTCACCCTGTACATCTCTAATCTCTTAATATGCTAATGATGGGACAATTCACATGATATTACAACATTTAGAAAATTAATTTCTAAATATGTAGTCACCAGGG

mRNA sequence

CGTAGTTGAAAATGGTTTTTGCAACTTTTTCGATTAAGAAAAGGGTCGGTTGAGACTATCTCCATTCTCACGCCAAATGATCGGATTGCGCTTTTGCTTCTACTCCGCGCATCTCAACGAAAACTCCAAACGAAAAGAAAAATAAAAACCTCTATTTCCTTTCTTCATTCCTAAATTTATTTCTAAGGTCACCCAAAAAATGGCGGAGCCGTCACCATGGGCGGAGCTGACTCACGAGTGTCTAACCAACATCCTCTCTCGTCTAACCATGGAGCAGCGGTGGCGCGGCCCTATGCTCGTTTGCAAACACTGGTTCCGTGCCGCCACGGATCCTTCTCTTTTTTCACACTTCGATCTCGAAAAAAGGTTCGAGTCTGCCCCCACCGAGCCTCCGGCCTGGTGGTTGCCGGAGTTCGAGACCAAAATTGATTCCATGCTCCGATCTGCCGTCCGTTGGAGCCTTGGATCTCTTTCAGTTATTCGGATTAGACACTGCTCCGATTCTTCTCTCGATTTAGTCGCTCAAGGATGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCGCCAATGTTACTGATAGATCAATGGCTAAGATTGCTTTTGGCTGCCAAAAGCTCCGGGAAGTAGATATCAGCTACTGTCACGAAATCTCAAACGTGTCTTTGGCATTAATCGGCAGGCATTGTCCAAATATCAAGACTCTAAAACGAAACTTTTTTAACAATCTAGATCCTTCCCAACATAAGGGAATTGTCCCTGACAATTATCTAGATGCCCGCCCACAAGATGTGGATTCAGAAGCTGCCGCTATTGCAAAATTCATGCACAACTTGGAGTACCTTGAACTCGGTTTCTCTAAACTATCAGCTAAAGCTCTAACTTTGATCTGTGAAGGATGTCCTAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACCAGCCGAGATATAATGAATGCTACATCAAGTTTGGAGCATTTGGAGATTAGGAAACCAAATTTCTACATTCCAAGGTCGGTCTTTCACACGGAGAGGTATGATCATTGGAGGTTGTATGATGAGAGATTCCAAACTGATATTTTCCGAATTTGATGATTCTGCAAGTGCACTTTTAATACTATATGTATAGCTGCACTTAGAAACCAAGTTTAATGTTGCTTTCCTAAGTTGTACAGTTTTTAATTTACCTGTTCTGTTTTATGACAGTTACAAGTCTGTATTATATTTGTAACTTGTATGGTGGACTGATGTGGCACAAGGTTGGTACTCTTGTAGTTATTGTTATGGGTTTCAGGTTTCACCCTGTACATCTCTAATCTCTTAATATGCTAATGATGGGACAATTCACATGATATTACAACATTTAGAAAATTAATTTCTAAATATGTAGTCACCAGGG

Coding sequence (CDS)

ATGGCGGAGCCGTCACCATGGGCGGAGCTGACTCACGAGTGTCTAACCAACATCCTCTCTCGTCTAACCATGGAGCAGCGGTGGCGCGGCCCTATGCTCGTTTGCAAACACTGGTTCCGTGCCGCCACGGATCCTTCTCTTTTTTCACACTTCGATCTCGAAAAAAGGTTCGAGTCTGCCCCCACCGAGCCTCCGGCCTGGTGGTTGCCGGAGTTCGAGACCAAAATTGATTCCATGCTCCGATCTGCCGTCCGTTGGAGCCTTGGATCTCTTTCAGTTATTCGGATTAGACACTGCTCCGATTCTTCTCTCGATTTAGTCGCTCAAGGATGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCGCCAATGTTACTGATAGATCAATGGCTAAGATTGCTTTTGGCTGCCAAAAGCTCCGGGAAGTAGATATCAGCTACTGTCACGAAATCTCAAACGTGTCTTTGGCATTAATCGGCAGGCATTGTCCAAATATCAAGACTCTAAAACGAAACTTTTTTAACAATCTAGATCCTTCCCAACATAAGGGAATTGTCCCTGACAATTATCTAGATGCCCGCCCACAAGATGTGGATTCAGAAGCTGCCGCTATTGCAAAATTCATGCACAACTTGGAGTACCTTGAACTCGGTTTCTCTAAACTATCAGCTAAAGCTCTAACTTTGATCTGTGAAGGATGTCCTAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACCAGCCGAGATATAATGAATGCTACATCAAGTTTGGAGCATTTGGAGATTAGGAAACCAAATTTCTACATTCCAAGGTCGGTCTTTCACACGGAGAGGTATGATCATTGGAGGTTGTATGATGAGAGATTCCAAACTGATATTTTCCGAATTTGA

Protein sequence

MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI*

Homology

[Close]

BLAST of CSPI02G05250 vs. ExPASy Swiss-Prot
Match: Q9FDX1 (F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.1e-91
Identity = 172/298 (57.72%), Postives = 209/298 (70.13%), Query Frame = 0


Query: 5   SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEP 64
           S W  L  E L NI+SRLT+++ W GPM V K W     DP L+S FDLE  F+S P E 
Sbjct: 6   SDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYP-ES 65

Query: 65  PAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVLSIKSCAN 124
              W PEFE K+D MLRS V WS G L+ IR+RHCSD +L   A  CPNL+VL+I+S  N
Sbjct: 66  THLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHCSDHALSYAADRCPNLQVLAIRSSPN 125

Query: 125 VTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKG 184
           VTD SM KIAF C+ L+E+DISYCHEIS+ +L +IGR+CPN++ LKRN  +    S+H G
Sbjct: 126 VTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMD--WSSRHIG 185

Query: 185 IVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFG 244
            VP  YLDA PQD D+EA AI K M NLE+LE+ FS+LS K L  ICEGCP L+YLDLFG
Sbjct: 186 SVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFG 245

Query: 245 CVNLTSRDIMNATSSLEHL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI 300
           CV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERY HWRLYDERF     RI
Sbjct: 246 CVHLSSRDITSNVSRLKWLKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQAMRI 300

[Close]

BLAST of CSPI02G05250 vs. ExPASy Swiss-Prot
Match: Q9M096 (Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana OX=3702 GN=FBL19 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.0e-73
Identity = 144/276 (52.17%), Postives = 183/276 (66.30%), Query Frame = 0


Query: 7   WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPA 66
           W+ELT ECL +I SRL+ EQRW GPMLV K+W  A  DP+L + FDLE RF S P E   
Sbjct: 20  WSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLETRFLSFP-ESIN 79

Query: 67  WWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVLSIKSCANVT 126
           WW PEFE K+DS LRS V  S G L+ IRIRHC++ SL   A+ CPNLEVL IK+C NVT
Sbjct: 80  WWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCTERSLSYAAERCPNLEVLWIKNCPNVT 139

Query: 127 DRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIV 186
           D SM KIA  C  LRE+DISY + I++ SL  +GR C N+K LKRN    L PS    + 
Sbjct: 140 DASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTIVA 199

Query: 187 PDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCV 246
           P +YL   P+  + EA  I K+M  L++LE+ +S L+A+ L  +C+GC NL+Y+DL GC+
Sbjct: 200 PLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRGCI 259

Query: 247 NLTSRDIMNATSSLEHL-EIRKPNFYIPRSVFHTER 282
           +LT  DI   TS L++L EI KP+F  P +V    R
Sbjct: 260 SLTRSDINTNTSGLKNLTEIIKPDFNPPIAVLRVPR 294

[Close]

BLAST of CSPI02G05250 vs. ExPASy Swiss-Prot
Match: Q9S9V8 (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.7e-22
Identity = 76/243 (31.28%), Postives = 115/243 (47.33%), Query Frame = 0


Query: 7   WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPA 66
           WAEL  E  ++IL RL   +  +    VCK W R   DPS++   D+  + E+       
Sbjct: 21  WAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIK-ENLVNSVEL 80

Query: 67  WWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSS-LDLVAQGCPNLEVLSIKSCANV 126
           +++      I+ +   AV  S G L  I I +  ++S L+ +A    NL  L +  CA V
Sbjct: 81  FYV------IEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPV 140

Query: 127 TDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGI 186
             R + + A     L E+DI+Y   I    L ++G+ CPN++TLK N   ++        
Sbjct: 141 LSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDV-------- 200

Query: 187 VPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGC 246
                     +  D  A AIA+ M  L +L+L  + LS   L  I EGCP+LK L L  C
Sbjct: 201 ----------KCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQC 238

Query: 247 VNL 249
           +N+
Sbjct: 261 LNI 238

[Close]

BLAST of CSPI02G05250 vs. ExPASy Swiss-Prot
Match: Q9M0U8 (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.4e-18
Identity = 74/253 (29.25%), Postives = 108/253 (42.69%), Query Frame = 0


Query: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60
           M E   W +L  E  T+IL RL++         VCK W R   DPS++   +        
Sbjct: 40  MKERRNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTRDCL--- 99

Query: 61  PTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI--RHCSDSSLDLVAQGCPNLEVLS 120
                      +     SM R  V  S G L  I +     SDS L  +     NL  L 
Sbjct: 100 ----------MYNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITD--RNLRSLG 159

Query: 121 IKSC-ANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNL 180
           +  C   VT   +         L  ++++  H    + L  IG  CP +KTLK N    L
Sbjct: 160 LGMCFPRVTKLGVVNAIAKIPLLETLEVT--HSCIKLDLKAIGHACPQLKTLKLNSLGRL 219

Query: 181 DPSQHKGIVPDNYL-DARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPN 240
            P+  K     N L D  P + D +A AIA+ M  L +L+L  ++L+   L  I +GCP+
Sbjct: 220 WPASDK--YDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPH 273

Query: 241 LKYLDLFGCVNLT 250
           L++LD+  C  ++
Sbjct: 280 LEHLDVRKCFRIS 273

[Close]

BLAST of CSPI02G05250 vs. ExPASy Swiss-Prot
Match: Q9M0U6 (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.6e-16
Identity = 72/252 (28.57%), Postives = 114/252 (45.24%), Query Frame = 0


Query: 3   EPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLE--KRFESA 62
           +PS WAEL  + L++IL RL+  +       VC+ W R + DP ++   D+   +R    
Sbjct: 23  KPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLYCI 82

Query: 63  PTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI---RHCSDSSLDLVAQGCPNLEVL 122
                          +++  R  V  S G L    I   R  + S L+ +A+   NL  L
Sbjct: 83  -------------YAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRL 142

Query: 123 SIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKR-NFFNN 182
            +K    +T   + +       L E+++ YC  I       IG+ CPN+KTLK   F+++
Sbjct: 143 RVKG-GQITSVGIFEAIVKLPLLEELELLYC-SIEEEHFKTIGQACPNLKTLKLVGFWSH 202

Query: 183 LDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPN 242
           L+ S                  D++A AIA  M  L +L+L  + L+   L  I +GCP+
Sbjct: 203 LNES------------------DNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPH 241

Query: 243 LKYLDLFGCVNL 249
           L+ LDL  C N+
Sbjct: 263 LECLDLRQCFNI 241

[Close]

BLAST of CSPI02G05250 vs. ExPASy TrEMBL
Match: A0A0A0LM72 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G036050 PE=4 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 5.5e-175
Identity = 298/299 (99.67%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60
           MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA
Sbjct: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60

Query: 61  PTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVLSIK 120
           PTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVLSIK
Sbjct: 61  PTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVLSIK 120

Query: 121 SCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPS 180
           SCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPS
Sbjct: 121 SCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPS 180

Query: 181 QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL 240
           QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL
Sbjct: 181 QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL 240

Query: 241 DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 300
           DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI
Sbjct: 241 DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 299

[Close]

BLAST of CSPI02G05250 vs. ExPASy TrEMBL
Match: A0A5D3BD72 (F-box protein SKIP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00320 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.0e-165
Identity = 284/303 (93.73%), Postives = 290/303 (95.71%), Query Frame = 0


Query: 1   MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKR 60
           MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWFRAA DPSLFSHFDLE R
Sbjct: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60

Query: 61  FESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEV 120
           FESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+RHCSDSSLD VAQGCPNLEV
Sbjct: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120

Query: 121 LSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNN 180
           LSIKSCANVTD SMAKIAFGCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRN+FNN
Sbjct: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180

Query: 181 LDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPN 240
           LDPSQHKGIVPDNYLDA PQDVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPN
Sbjct: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240

Query: 241 LKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300

[Close]

BLAST of CSPI02G05250 vs. ExPASy TrEMBL
Match: A0A1S3BUE6 (F-box protein SKIP1 OS=Cucumis melo OX=3656 GN=LOC103493639 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.0e-165
Identity = 284/303 (93.73%), Postives = 290/303 (95.71%), Query Frame = 0


Query: 1   MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKR 60
           MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWFRAA DPSLFSHFDLE R
Sbjct: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60

Query: 61  FESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEV 120
           FESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+RHCSDSSLD VAQGCPNLEV
Sbjct: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120

Query: 121 LSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNN 180
           LSIKSCANVTD SMAKIAFGCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRN+FNN
Sbjct: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180

Query: 181 LDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPN 240
           LDPSQHKGIVPDNYLDA PQDVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPN
Sbjct: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240

Query: 241 LKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300

[Close]

BLAST of CSPI02G05250 vs. ExPASy TrEMBL
Match: A0A5A7UJH9 (F-box protein SKIP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold323G00770 PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.1e-164
Identity = 283/303 (93.40%), Postives = 289/303 (95.38%), Query Frame = 0


Query: 1   MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKR 60
           MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWF AA DPSLFSHFDLE R
Sbjct: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFHAARDPSLFSHFDLEPR 60

Query: 61  FESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEV 120
           FESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+RHCSDSSLD VAQGCPNLEV
Sbjct: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120

Query: 121 LSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNN 180
           LSIKSCANVTD SMAKIAFGCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRN+FNN
Sbjct: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180

Query: 181 LDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPN 240
           LDPSQHKGIVPDNYLDA PQDVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPN
Sbjct: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240

Query: 241 LKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300

[Close]

BLAST of CSPI02G05250 vs. ExPASy TrEMBL
Match: A0A6J1G461 (F-box protein SKIP1-like OS=Cucurbita moschata OX=3662 GN=LOC111450576 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.5e-151
Identity = 263/299 (87.96%), Postives = 279/299 (93.31%), Query Frame = 0


Query: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60
           MAEPS WAELT ECLTNI SRLT+EQRWRGPMLVCK W RAATD SLFSHFDLE RF+S 
Sbjct: 1   MAEPS-WAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDST 60

Query: 61  PTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVLSIK 120
           PTE PAWW P+FE KIDSMLRSAV+WSLGSLS+IRIRHCSDSSL LVAQGCPNLEVLSIK
Sbjct: 61  PTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVLSIK 120

Query: 121 SCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPS 180
           SCANVTDRSMAKIA GCQKL+EVDISYCHEISNVSL+LIG+HCPNIKTLKRNFFN LDPS
Sbjct: 121 SCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPS 180

Query: 181 QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL 240
           Q KGIVPD+YL+A PQDVDSEA AIAKFM NLE+L+L FSKLSAKALTLIC+GCPNLKYL
Sbjct: 181 QQKGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYL 240

Query: 241 DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 300
           DLFGCVNLTSRDI+NATS+LE+LEIRKPNFYIPRSVFHTERY HWRLYDERFQTDIFRI
Sbjct: 241 DLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

[Close]

BLAST of CSPI02G05250 vs. NCBI nr
Match: XP_004144728.1 (F-box protein SKIP1 [Cucumis sativus] >KGN61056.1 hypothetical protein Csa_021226 [Cucumis sativus])

HSP 1 Score: 623.2 bits (1606), Expect = 1.1e-174
Identity = 298/299 (99.67%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60
           MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA
Sbjct: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60

Query: 61  PTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVLSIK 120
           PTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVLSIK
Sbjct: 61  PTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVLSIK 120

Query: 121 SCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPS 180
           SCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPS
Sbjct: 121 SCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPS 180

Query: 181 QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL 240
           QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL
Sbjct: 181 QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL 240

Query: 241 DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 300
           DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI
Sbjct: 241 DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 299

[Close]

BLAST of CSPI02G05250 vs. NCBI nr
Match: XP_008452697.1 (PREDICTED: F-box protein SKIP1 [Cucumis melo] >TYJ96405.1 F-box protein SKIP1 [Cucumis melo var. makuwa])

HSP 1 Score: 590.9 bits (1522), Expect = 6.2e-165
Identity = 284/303 (93.73%), Postives = 290/303 (95.71%), Query Frame = 0


Query: 1   MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKR 60
           MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWFRAA DPSLFSHFDLE R
Sbjct: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60

Query: 61  FESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEV 120
           FESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+RHCSDSSLD VAQGCPNLEV
Sbjct: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120

Query: 121 LSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNN 180
           LSIKSCANVTD SMAKIAFGCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRN+FNN
Sbjct: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180

Query: 181 LDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPN 240
           LDPSQHKGIVPDNYLDA PQDVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPN
Sbjct: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240

Query: 241 LKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300

[Close]

BLAST of CSPI02G05250 vs. NCBI nr
Match: KAA0056113.1 (F-box protein SKIP1 [Cucumis melo var. makuwa])

HSP 1 Score: 589.0 bits (1517), Expect = 2.4e-164
Identity = 283/303 (93.40%), Postives = 289/303 (95.38%), Query Frame = 0


Query: 1   MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKR 60
           MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWF AA DPSLFSHFDLE R
Sbjct: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFHAARDPSLFSHFDLEPR 60

Query: 61  FESAPTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEV 120
           FESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+RHCSDSSLD VAQGCPNLEV
Sbjct: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120

Query: 121 LSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNN 180
           LSIKSCANVTD SMAKIAFGCQKLREVDISYCHEISN+SLALIGRHCPNIKTLKRN+FNN
Sbjct: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180

Query: 181 LDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPN 240
           LDPSQHKGIVPDNYLDA PQDVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPN
Sbjct: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240

Query: 241 LKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300

[Close]

BLAST of CSPI02G05250 vs. NCBI nr
Match: XP_038890479.1 (F-box protein SKIP1 [Benincasa hispida])

HSP 1 Score: 565.8 bits (1457), Expect = 2.2e-157
Identity = 269/299 (89.97%), Postives = 283/299 (94.65%), Query Frame = 0


Query: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60
           ++E S WAELTHECLTNILSRLT+EQRWRGPMLVCK W RAATDPSLFSHFDLE RFES 
Sbjct: 5   LSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFEST 64

Query: 61  PTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVLSIK 120
           PTE PAWW PEFETKIDSMLRSAV WSLGSLS+IRIRHCSDSSLD VAQGCPNLEVLSIK
Sbjct: 65  PTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDSSLDFVAQGCPNLEVLSIK 124

Query: 121 SCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPS 180
           SCANVTDRSMAKIA GCQKLREVDISYCHEISN+SLALIG+HCPNIKT+KRNFFNNLDPS
Sbjct: 125 SCANVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTIKRNFFNNLDPS 184

Query: 181 QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL 240
           QHKGIVPDNYL++ PQDVDSEAAAIAKFM NLE+LELGFSKLSAKAL+LICEGCP LK+L
Sbjct: 185 QHKGIVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKFL 244

Query: 241 DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 300
           DLFGCVNLTSRDI NATSS+E+LEIRKPNFYIPRSVFHTERY HWRLYDERFQTDIFRI
Sbjct: 245 DLFGCVNLTSRDIANATSSMENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 303

[Close]

BLAST of CSPI02G05250 vs. NCBI nr
Match: KAG6599142.1 (F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030085.1 F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 546.6 bits (1407), Expect = 1.4e-151
Identity = 264/299 (88.29%), Postives = 279/299 (93.31%), Query Frame = 0


Query: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60
           MAEPS WAELT ECLTNI SRLT+EQRWRGPMLVCK W RAATD SLFSHFDLE RF+S 
Sbjct: 1   MAEPS-WAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDST 60

Query: 61  PTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVLSIK 120
           PTE PAWW P+FE KIDSMLRSAV+WSLGSLS+IRIRHCSDSSL LVAQGCPNLEVLSIK
Sbjct: 61  PTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVLSIK 120

Query: 121 SCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPS 180
           SCANVTDRSMAKIA GCQKL+EVDISYCHEISNVSL+LIG+HCPNIKTLKRNFFN LDPS
Sbjct: 121 SCANVTDRSMAKIALGCQKLQEVDISYCHEISNVSLSLIGKHCPNIKTLKRNFFNTLDPS 180

Query: 181 QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL 240
           Q KGIVPD+YL+A PQDVDSEA AIAKFM NLE+L+L FSKLSAKALTLIC+GCPNLKYL
Sbjct: 181 QQKGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYL 240

Query: 241 DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 300
           DLFGCVNLTSRDI+NATSSLE+LEIRKPNFYIPRSVFHTERY HWRLYDERFQTDIFRI
Sbjct: 241 DLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

[Close]

BLAST of CSPI02G05250 vs. TAIR 10
Match: AT5G57900.1 (SKP1 interacting partner 1 )

HSP 1 Score: 337.0 bits (863), Expect = 1.5e-92
Identity = 172/298 (57.72%), Postives = 209/298 (70.13%), Query Frame = 0


Query: 5   SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEP 64
           S W  L  E L NI+SRLT+++ W GPM V K W     DP L+S FDLE  F+S P E 
Sbjct: 6   SDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYP-ES 65

Query: 65  PAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVLSIKSCAN 124
              W PEFE K+D MLRS V WS G L+ IR+RHCSD +L   A  CPNL+VL+I+S  N
Sbjct: 66  THLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHCSDHALSYAADRCPNLQVLAIRSSPN 125

Query: 125 VTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKG 184
           VTD SM KIAF C+ L+E+DISYCHEIS+ +L +IGR+CPN++ LKRN  +    S+H G
Sbjct: 126 VTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMD--WSSRHIG 185

Query: 185 IVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFG 244
            VP  YLDA PQD D+EA AI K M NLE+LE+ FS+LS K L  ICEGCP L+YLDLFG
Sbjct: 186 SVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFG 245

Query: 245 CVNLTSRDIMNATSSLEHL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI 300
           CV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERY HWRLYDERF     RI
Sbjct: 246 CVHLSSRDITSNVSRLKWLKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQAMRI 300

[Close]

BLAST of CSPI02G05250 vs. TAIR 10
Match: AT4G30640.1 (RNI-like superfamily protein )

HSP 1 Score: 277.3 bits (708), Expect = 1.4e-74
Identity = 144/276 (52.17%), Postives = 183/276 (66.30%), Query Frame = 0


Query: 7   WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPA 66
           W+ELT ECL +I SRL+ EQRW GPMLV K+W  A  DP+L + FDLE RF S P E   
Sbjct: 20  WSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLETRFLSFP-ESIN 79

Query: 67  WWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVLSIKSCANVT 126
           WW PEFE K+DS LRS V  S G L+ IRIRHC++ SL   A+ CPNLEVL IK+C NVT
Sbjct: 80  WWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCTERSLSYAAERCPNLEVLWIKNCPNVT 139

Query: 127 DRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIV 186
           D SM KIA  C  LRE+DISY + I++ SL  +GR C N+K LKRN    L PS    + 
Sbjct: 140 DASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTIVA 199

Query: 187 PDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCV 246
           P +YL   P+  + EA  I K+M  L++LE+ +S L+A+ L  +C+GC NL+Y+DL GC+
Sbjct: 200 PLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRGCI 259

Query: 247 NLTSRDIMNATSSLEHL-EIRKPNFYIPRSVFHTER 282
           +LT  DI   TS L++L EI KP+F  P +V    R
Sbjct: 260 SLTRSDINTNTSGLKNLTEIIKPDFNPPIAVLRVPR 294

[Close]

BLAST of CSPI02G05250 vs. TAIR 10
Match: AT4G05497.1 (RNI-like superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 3.3e-23
Identity = 76/243 (31.28%), Postives = 115/243 (47.33%), Query Frame = 0


Query: 7   WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEPPA 66
           WAEL  E  ++IL RL   +  +    VCK W R   DPS++   D+  + E+       
Sbjct: 21  WAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIK-ENLVNSVEL 80

Query: 67  WWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSS-LDLVAQGCPNLEVLSIKSCANV 126
           +++      I+ +   AV  S G L  I I +  ++S L+ +A    NL  L +  CA V
Sbjct: 81  FYV------IEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPV 140

Query: 127 TDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGI 186
             R + + A     L E+DI+Y   I    L ++G+ CPN++TLK N   ++        
Sbjct: 141 LSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDV-------- 200

Query: 187 VPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGC 246
                     +  D  A AIA+ M  L +L+L  + LS   L  I EGCP+LK L L  C
Sbjct: 201 ----------KCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQC 238

Query: 247 VNL 249
           +N+
Sbjct: 261 LNI 238

[Close]

BLAST of CSPI02G05250 vs. TAIR 10
Match: AT4G05470.1 (RNI-like superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 3.8e-19
Identity = 74/253 (29.25%), Postives = 108/253 (42.69%), Query Frame = 0


Query: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60
           M E   W +L  E  T+IL RL++         VCK W R   DPS++   +        
Sbjct: 40  MKERRNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTRDCL--- 99

Query: 61  PTEPPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRI--RHCSDSSLDLVAQGCPNLEVLS 120
                      +     SM R  V  S G L  I +     SDS L  +     NL  L 
Sbjct: 100 ----------MYNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITD--RNLRSLG 159

Query: 121 IKSC-ANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNL 180
           +  C   VT   +         L  ++++  H    + L  IG  CP +KTLK N    L
Sbjct: 160 LGMCFPRVTKLGVVNAIAKIPLLETLEVT--HSCIKLDLKAIGHACPQLKTLKLNSLGRL 219

Query: 181 DPSQHKGIVPDNYL-DARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPN 240
            P+  K     N L D  P + D +A AIA+ M  L +L+L  ++L+   L  I +GCP+
Sbjct: 220 WPASDK--YDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPH 273

Query: 241 LKYLDLFGCVNLT 250
           L++LD+  C  ++
Sbjct: 280 LEHLDVRKCFRIS 273

[Close]

BLAST of CSPI02G05250 vs. TAIR 10
Match: AT5G52480.1 (RNI-like superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 5.7e-15
Identity = 59/175 (33.71%), Postives = 88/175 (50.29%), Query Frame = 0


Query: 77  DSMLRSAVRWSLGSLSVIRIRHC-SDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAF 136
           +++ R+AV  S G L  I I    SDS L  +A+   NL  L +  C+ +TD    +   
Sbjct: 16  EAICRNAVDRSEGGLLEINIGDFGSDSLLTYIAERSSNLRSLRL-MCSEITDDGFVQAVV 75

Query: 137 GCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRN--FFNNLDPSQHKGIVPDNYLDA 196
               L E+++S    +S  S+ L G  CPN+KTL  N  F+ + D               
Sbjct: 76  KLPMLEELEVSGI-SLSGESMKLAGLSCPNLKTLMLNRLFYLSSD--------------- 135

Query: 197 RPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL 249
              D D +A AIA+ M  L +L+L  +KL+   L  I +GCP+L++LDL  C+NL
Sbjct: 136 ---DDDHDAIAIAESMPKLRHLQLCGNKLTKTGLNAILDGCPHLEHLDLRQCINL 170

The following BLAST results are available for this feature:

BLAST of CSPI02G05250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FDX1	2.1e-91	57.72	F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1	[more]
Q9M096	2.0e-73	52.17	Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana OX=3702 GN=FBL19 PE...	[more]
Q9S9V8	4.7e-22	31.28	Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4...	[more]
Q9M0U8	5.4e-18	29.25	Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE...	[more]
Q9M0U6	8.6e-16	28.57	Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE...	[more]

BLAST of CSPI02G05250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM72	5.5e-175	99.67	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G036050 PE=4 ...	[more]
A0A5D3BD72	3.0e-165	93.73	F-box protein SKIP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G...	[more]
A0A1S3BUE6	3.0e-165	93.73	F-box protein SKIP1 OS=Cucumis melo OX=3656 GN=LOC103493639 PE=4 SV=1	[more]
A0A5A7UJH9	1.1e-164	93.40	F-box protein SKIP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold323G...	[more]
A0A6J1G461	1.5e-151	87.96	F-box protein SKIP1-like OS=Cucurbita moschata OX=3662 GN=LOC111450576 PE=4 SV=1	[more]

BLAST of CSPI02G05250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144728.1	1.1e-174	99.67	F-box protein SKIP1 [Cucumis sativus] >KGN61056.1 hypothetical protein Csa_02122...	[more]
XP_008452697.1	6.2e-165	93.73	PREDICTED: F-box protein SKIP1 [Cucumis melo] >TYJ96405.1 F-box protein SKIP1 [C...	[more]
KAA0056113.1	2.4e-164	93.40	F-box protein SKIP1 [Cucumis melo var. makuwa]	[more]
XP_038890479.1	2.2e-157	89.97	F-box protein SKIP1 [Benincasa hispida]	[more]
KAG6599142.1	1.4e-151	88.29	F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030085...	[more]

BLAST of CSPI02G05250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57900.1	1.5e-92	57.72	SKP1 interacting partner 1	[more]
AT4G30640.1	1.4e-74	52.17	RNI-like superfamily protein	[more]
AT4G05497.1	3.3e-23	31.28	RNI-like superfamily protein	[more]
AT4G05470.1	3.8e-19	29.25	RNI-like superfamily protein	[more]
AT5G52480.1	5.7e-15	33.71	RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 234..259 e-value: 0.014 score: 24.5 coord: 209..233 e-value: 590.0 score: 0.7 coord: 137..162 e-value: 0.0086 score: 25.3 coord: 111..136 e-value: 0.0012 score: 28.1
None	No IPR available	GENE3D	1.20.1280.50		coord: 6..47 e-value: 6.6E-9 score: 37.5
None	No IPR available	PANTHER	PTHR16134:SF29	F-BOX PROTEIN SKIP1	coord: 7..299
None	No IPR available	PANTHER	PTHR16134	F-BOX/TPR REPEAT PROTEIN POF3	coord: 7..299
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 81..262
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 137..156 e-value: 0.44 score: 10.8
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 12..52 e-value: 1.2E-5 score: 25.0
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 75..272 e-value: 1.9E-34 score: 120.8
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 2..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G05250.1	CSPI02G05250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding