CSPI02G02410 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGAATATATATATATACCATCAAATCAAAAACTCAAAAAAGATACTCAAAGTTAGAATCTTGTCTTCATTCTCGTCGCCATTGTTGCTCTAAACCAAAAGCTTAGCTTTCTTGTTCATACAGTACTATATTCCAAATGAAGCTCCCTCCAATGGCGGTTCTTCTTCTTTTCCTTATGATCATGCTTCAAGCTCAAGGTATGTACCAACTTTATTGTTAATTAGTTTTGATCTCAAATATATACTTTTCCAACTTGGGTTTTGTTTAGTTATCTTTAGAAACATTATTACTCTATCTTGATTTTTCTTTGTTTTCAAAATCAAGTTAACGTTTTGAAAACGTTTTTGGGTTTTTTTAATGATTATATCTTTTACGATTCTTCTTTATTTCGTTTTAAATACTTAAAGAAAGTTCAAATATTCTGTTAAGAAAAGAAAAACTTAAGGAAACATAAATTTCATAACAAAATACTACAATTTTAACATACATTAATAGTGTTTTTATGCACTTACAAAGTTATTCGATGTCCTTTGTCAAGCAGAAAAAATGAATTTTCTTTTTGAACTTTTTGAAGGGATTCGGTTGTTGGAGAAAGGGATGAGCAAAGAGTACAAGAAAAGTGGAGGTTTTTTGGTAAATAAAAATGGTGGAGATTCATTGATGACAATGAAGAAGAGAGCCCCAATTAGGGCTTTAAGAAAACCATATTCACATTGGCTTCCAGGCATTCAAGAAGATTATCATGGACCAAGAAGCCATAAATCTAGGCACCATTGACTCTTTTTTTTTTTTTTTTCTTTTTTATGAGATTAATTATTATTATTTGAGGCGTACATATAGAATCCGAACGTTGGATCGTCGTTATATTCTTTAGTAAAATTAGTTAACAAAGATGGAACAGATTGAAGAAATCATTCGAAGAGCTAGAAACGCAACGTGGTTGTCAACTTTTTATATGTACGATAGAGAAATTAACCATGTTTGAGGTAGCTACGTTGTGTAGTTTTAGCTTTTAACTAGATCAGTTGAGACTGATTATAAATTTTGAGAATAAAATTCTTTATTAAATAAGATTCAAGAAAATGTTGAATCTTCATTTATTTACTCTCCTACCTGAATTATTTGTATGTGTTTTATTCTACCAC AAAAGAATATATATATATACCATCAAATCAAAAACTCAAAAAAGATACTCAAAGTTAGAATCTTGTCTTCATTCTCGTCGCCATTGTTGCTCTAAACCAAAAGCTTAGCTTTCTTGTTCATACAGTACTATATTCCAAATGAAGCTCCCTCCAATGGCGGTTCTTCTTCTTTTCCTTATGATCATGCTTCAAGCTCAAGGGATTCGGTTGTTGGAGAAAGGGATGAGCAAAGAGTACAAGAAAAGTGGAGGTTTTTTGGTAAATAAAAATGGTGGAGATTCATTGATGACAATGAAGAAGAGAGCCCCAATTAGGGCTTTAAGAAAACCATATTCACATTGGCTTCCAGGCATTCAAGAAGATTATCATGGACCAAGAAGCCATAAATCTAGGCACCATTGACTCTTTTTTTTTTTTTTTTCTTTTTTATGAGATTAATTATTATTATTTGAGGCGTACATATAGAATCCGAACGTTGGATCGTCGTTATATTCTTTAGTAAAATTAGTTAACAAAGATGGAACAGATTGAAGAAATCATTCGAAGAGCTAGAAACGCAACGTGGTTGTCAACTTTTTATATGTACGATAGAGAAATTAACCATGTTTGAGGTAGCTACGTTGTGTAGTTTTAGCTTTTAACTAGATCAGTTGAGACTGATTATAAATTTTGAGAATAAAATTCTTTATTAAATAAGATTCAAGAAAATGTTGAATCTTCATTTATTTACTCTCCTACCTGAATTATTTGTATGTGTTTTATTCTACCAC ATGAAGCTCCCTCCAATGGCGGTTCTTCTTCTTTTCCTTATGATCATGCTTCAAGCTCAAGGGATTCGGTTGTTGGAGAAAGGGATGAGCAAAGAGTACAAGAAAAGTGGAGGTTTTTTGGTAAATAAAAATGGTGGAGATTCATTGATGACAATGAAGAAGAGAGCCCCAATTAGGGCTTTAAGAAAACCATATTCACATTGGCTTCCAGGCATTCAAGAAGATTATCATGGACCAAGAAGCCATAAATCTAGGCACCATTGA MKLPPMAVLLLFLMIMLQAQGIRLLEKGMSKEYKKSGGFLVNKNGGDSLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH* Homology
BLAST of CSPI02G02410 vs. ExPASy TrEMBL
Match: A0A0A0LJ48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009400 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.2e-37 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of CSPI02G02410 vs. ExPASy TrEMBL
Match: A0A5N6RX03 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_020903 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.9e-07 Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 0
BLAST of CSPI02G02410 vs. ExPASy TrEMBL
Match: A0A6M2ES64 (Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.5e-05 Identity = 42/103 (40.78%), Postives = 51/103 (49.51%), Query Frame = 0
BLAST of CSPI02G02410 vs. ExPASy TrEMBL
Match: A0A5D2PE55 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A08G105700v1 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.8e-04 Identity = 33/88 (37.50%), Postives = 48/88 (54.55%), Query Frame = 0
BLAST of CSPI02G02410 vs. ExPASy TrEMBL
Match: A0A0D2U6Z9 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G057200 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.3e-04 Identity = 33/86 (38.37%), Postives = 49/86 (56.98%), Query Frame = 0
BLAST of CSPI02G02410 vs. NCBI nr
Match: KAG6586348.1 (Ubiquitin-like domain-containing protein CIP73, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 85.9 bits (211), Expect = 1.9e-13 Identity = 51/77 (66.23%), Postives = 57/77 (74.03%), Query Frame = 0
BLAST of CSPI02G02410 vs. NCBI nr
Match: KAE8126159.1 (hypothetical protein FH972_020903 [Carpinus fangiana]) HSP 1 Score: 64.3 bits (155), Expect = 6.0e-07 Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 0
BLAST of CSPI02G02410 vs. NCBI nr
Match: KAG6769267.1 (hypothetical protein POTOM_024887 [Populus tomentosa]) HSP 1 Score: 59.7 bits (143), Expect = 1.5e-05 Identity = 42/102 (41.18%), Postives = 53/102 (51.96%), Query Frame = 0
BLAST of CSPI02G02410 vs. NCBI nr
Match: TYI14153.1 (hypothetical protein ES332_A08G105700v1 [Gossypium tomentosum]) HSP 1 Score: 55.1 bits (131), Expect = 3.6e-04 Identity = 33/88 (37.50%), Postives = 48/88 (54.55%), Query Frame = 0
BLAST of CSPI02G02410 vs. NCBI nr
Match: KAG4187193.1 (hypothetical protein ERO13_A08G092000v2 [Gossypium hirsutum] >KAG8485841.1 hypothetical protein CXB51_019232 [Gossypium anomalum]) HSP 1 Score: 54.7 bits (130), Expect = 4.7e-04 Identity = 33/88 (37.50%), Postives = 48/88 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|