CSPI02G02070 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G02070
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Actin-related protein 2/3 complex subunit 3
Location	Chr2: 1456849 .. 1458693 (-)
RNA-Seq Expression	CSPI02G02070
Synteny	CSPI02G02070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGACGGTGACGGAATTATTAGAAACGAAGAAGCCCATTTCTCCGGTCCCCGTTATTTGCTTCGGTCTTCCTCCTGACATTTCCAGCGGCTATTCTGACTCCGATCCGCTCATCGGAACAGAAATATTTCCGGTAAGTAACATCGAAATCATGGTTACTCAATTCTGCTGACTGCCAAGTGAGAGTCGATCGAGCTGCGGATTTCGAAGTTTATTGGGAAATTCGATCCTTAGTCTTTGAAAGAATAGCTGTTCGCTAGATTGGATTGATATTTAAAGGATTCATTTCTGAATTACCATTTGGAGACTGGAATTATTGATTAAAGAGATTGATTCTCTTACTCTTGTTTTCTCCTACGATTTTTACAGTTGGGAAGAATTCGGAGCTTGGGAAGAAGTGTAGGACGTTGATTATTGAGAAAAATAATGGTGGGTTTTCAAGTTTTTGATGGGTTTAACGCTTTTCTCGATTTGGATATAGCGTTGGAAGGGTTAGAGGAAACTTGTTCGTATTTTTTTTTTATCGATTTTATTATATTTCAAATGGGTATTTTTTTTCTCTTCATGTGTTGAATTGGAATTGAGTTGGTGGTTTTGTTCTAGGTTCATCATTCTAGCTTTGTGGATGAGGAAGGAATAAGCAAGGCTTGTGGTTGTCCTTTACTTCCTTTGAAAAGTCACATAAAGGGTCCTGCTCCAGTTTCAGATCAAGGTTGATTAAGTTGTTTGTAGAACATCTCATCTCTCTGTATGTTTCATACTGAAATTTATGTTGTTTGGAAATTCACAGATAAGACTGATATTGTTGATGAAGCAATTACATTCTTTCGTGCCAATGTCTTCTTTAGAAATTTTGACATTAAGAGTGCTGCTGATAAGCTTCTCATCTATTTGACATTCTACATCAATGTGGCTTTGAAGAGGCTTGAAGGTTGCAGAACTTTGGCTGTAGGAACCAAGGCTATAATTAACTTGGGTTTGGAGAACGTTCCCGTGCCCGGAGAGTCAGGTTTTCCCTTTCCTGGACTCTTCCCTATTCCCCAATCTAATGAGGAAGCAGGTGAAGCTTGATCTTAGTCTTCTCTATATCTCTACTGCTAATATTTGTTAACTACAAATACCTGCATATAAAGATGCTCCACTACCCAATGATCATCAACTTTTTCATTTGCATTTGTTTTAGTTTGCTGGATACAGATTAGGCACTTTGTTCCTTTTTCAGATTTTCACACAATTTATGTCAGTACAACATTCTTTTCCCAGATGAAGATTTTTTTCCCAATTCAGTTAATGCAGATATATTGAGTTAATCTTGTGTGGCATAGACTCCTGTTTCTTGTCTTATTATTTGACAATTGTTATAAGCTTCAAATATTTTGAATTCTATATGCAGAGCTATTCAGGAATTATTTGAAGCAGATAAGAGAAGAAACAAGTGGGAGACTTTTGAGTGTTGCCTATAGAACCAATGGGACTCCAAATAAATGGTGGTTAGCATTTGCAAAGAGAAAATTCATGAACATCATCATTCCTTGATGAATTTGCTTCCAAGACTGTTGATGTGAAAGTTATGAACATCAGCATTCCTTGATCACATGGACTGCTTGTGGTTTCTACTGGTATTTTAGGAGTTAGTTTGTATGAACAGAATCTGAATGTTATATCAGTTTATGCTAATGCATATCAAATTTCATCAGAAGTTAGGTCATATTCTTTTTCTTTTTAATAATCATCTTAAATGTAATGTGCTGTCATTTTACAATTTTTGTACATCAATTACACAACCCATCTTAATCAGAGGAAATAGTTTATGTCCC

mRNA sequence

AGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGACGGTGACGGAATTATTAGAAACGAAGAAGCCCATTTCTCCGGTCCCCGTTATTTGCTTCGGTCTTCCTCCTGACATTTCCAGCGGCTATTCTGACTCCGATCCGCTCATCGGAACAGAAATATTTCCGTTGGGAAGAATTCGGAGCTTGGGAAGAAGTGTAGGACGTTGATTATTGAGAAAAATAATGGTTCATCATTCTAGCTTTGTGGATGAGGAAGGAATAAGCAAGGCTTGTGGTTGTCCTTTACTTCCTTTGAAAAGTCACATAAAGGGTCCTGCTCCAGTTTCAGATCAAGATAAGACTGATATTGTTGATGAAGCAATTACATTCTTTCGTGCCAATGTCTTCTTTAGAAATTTTGACATTAAGAGTGCTGCTGATAAGCTTCTCATCTATTTGACATTCTACATCAATGTGGCTTTGAAGAGGCTTGAAGGTTGCAGAACTTTGGCTGTAGGAACCAAGGCTATAATTAACTTGGGTTTGGAGAACGTTCCCGTGCCCGGAGAGTCAGGTTTTCCCTTTCCTGGACTCTTCCCTATTCCCCAATCTAATGAGGAAGCAGAGCTATTCAGGAATTATTTGAAGCAGATAAGAGAAGAAACAAGTGGGAGACTTTTGAGTGTTGCCTATAGAACCAATGGGACTCCAAATAAATGGTGGTTAGCATTTGCAAAGAGAAAATTCATGAACATCATCATTCCTTGATGAATTTGCTTCCAAGACTGTTGATGTGAAAGTTATGAACATCAGCATTCCTTGATCACATGGACTGCTTGTGGTTTCTACTGGTATTTTAGGAGTTAGTTTGTATGAACAGAATCTGAATGTTATATCAGTTTATGCTAATGCATATCAAATTTCATCAGAAGTTAGGTCATATTCTTTTTCTTTTTAATAATCATCTTAAATGTAATGTGCTGTCATTTTACAATTTTTGTACATCAATTACACAACCCATCTTAATCAGAGGAAATAGTTTATGTCCC

Coding sequence (CDS)

ATGGTTCATCATTCTAGCTTTGTGGATGAGGAAGGAATAAGCAAGGCTTGTGGTTGTCCTTTACTTCCTTTGAAAAGTCACATAAAGGGTCCTGCTCCAGTTTCAGATCAAGATAAGACTGATATTGTTGATGAAGCAATTACATTCTTTCGTGCCAATGTCTTCTTTAGAAATTTTGACATTAAGAGTGCTGCTGATAAGCTTCTCATCTATTTGACATTCTACATCAATGTGGCTTTGAAGAGGCTTGAAGGTTGCAGAACTTTGGCTGTAGGAACCAAGGCTATAATTAACTTGGGTTTGGAGAACGTTCCCGTGCCCGGAGAGTCAGGTTTTCCCTTTCCTGGACTCTTCCCTATTCCCCAATCTAATGAGGAAGCAGAGCTATTCAGGAATTATTTGAAGCAGATAAGAGAAGAAACAAGTGGGAGACTTTTGAGTGTTGCCTATAGAACCAATGGGACTCCAAATAAATGGTGGTTAGCATTTGCAAAGAGAAAATTCATGAACATCATCATTCCTTGA

Protein sequence

MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIPQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP*

Homology

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BLAST of CSPI02G02070 vs. ExPASy Swiss-Prot
Match: Q1ECJ7 (Actin-related protein 2/3 complex subunit 3 OS=Arabidopsis thaliana OX=3702 GN=ARPC3 PE=1 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 1.8e-90
Identity = 155/173 (89.60%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MV+HSSFVDEEG++KACGCPLLPLKSHIKGPAPVS+QDKTDIVDEAITFFRANVFF NFD
Sbjct: 1   MVYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFD 60

Query: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKS ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE++PVPGE+GFPFPGLF +
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSL 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIII 174
           PQS +EAELFRNYLKQ+REETSGRLLSVAYR NGTPNKWWLAFAKRKFMN+++
Sbjct: 121 PQSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNVVV 173

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BLAST of CSPI02G02070 vs. ExPASy Swiss-Prot
Match: Q9JM76 (Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=3)

HSP 1 Score: 162.5 bits (410), Expect = 4.2e-39
Identity = 81/170 (47.65%), Postives = 114/170 (67.06%), Query Frame = 0


Query: 3   HHSSFVDEEGISKACG-CPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 62
           +HSS +D +  +K  G   LLPL+S  KGPAP   +D TDIVDEAI +F+ANVFF+N++I
Sbjct: 4   YHSSLMDPD--TKLIGNMALLPLRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEI 63

Query: 63  KSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIP 122
           K+ AD+ LIY+T YI+  LK+L+ C + + G K +  LG+ N P+PGE GFP   ++  P
Sbjct: 64  KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 123

Query: 123 QSNEEAELFRNYLKQIREETSGRLLSVAY-RTNGTPNKWWLAFAKRKFMN 171
            S +E E+ R YL+Q+R+ET  RL    +   +  P+KWW  F KR+FMN
Sbjct: 124 ASKQEDEMMRAYLQQLRQETGLRLCEKVFDPQSDKPSKWWTCFVKRQFMN 170

[Close]

BLAST of CSPI02G02070 vs. ExPASy Swiss-Prot
Match: Q3T035 (Actin-related protein 2/3 complex subunit 3 OS=Bos taurus OX=9913 GN=ARPC3 PE=1 SV=3)

HSP 1 Score: 162.2 bits (409), Expect = 5.5e-39
Identity = 80/170 (47.06%), Postives = 114/170 (67.06%), Query Frame = 0


Query: 3   HHSSFVDEEGISKACG-CPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 62
           +HSS +D +  +K  G   LLP++S  KGPAP   +D TDIVDEAI +F+ANVFF+N++I
Sbjct: 4   YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEI 63

Query: 63  KSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIP 122
           K+ AD+ LIY+T YI+  LK+L+ C + + G K +  LG+ N P+PGE GFP   ++  P
Sbjct: 64  KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 123

Query: 123 QSNEEAELFRNYLKQIREETSGRLLSVAY-RTNGTPNKWWLAFAKRKFMN 171
            + +E E+ R YL+Q+R+ET  RL    +   N  P+KWW  F KR+FMN
Sbjct: 124 ANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170

[Close]

BLAST of CSPI02G02070 vs. ExPASy Swiss-Prot
Match: O15145 (Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens OX=9606 GN=ARPC3 PE=1 SV=3)

HSP 1 Score: 162.2 bits (409), Expect = 5.5e-39
Identity = 80/170 (47.06%), Postives = 114/170 (67.06%), Query Frame = 0


Query: 3   HHSSFVDEEGISKACG-CPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 62
           +HSS +D +  +K  G   LLP++S  KGPAP   +D TDIVDEAI +F+ANVFF+N++I
Sbjct: 4   YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEI 63

Query: 63  KSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIP 122
           K+ AD+ LIY+T YI+  LK+L+ C + + G K +  LG+ N P+PGE GFP   ++  P
Sbjct: 64  KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 123

Query: 123 QSNEEAELFRNYLKQIREETSGRLLSVAY-RTNGTPNKWWLAFAKRKFMN 171
            + +E E+ R YL+Q+R+ET  RL    +   N  P+KWW  F KR+FMN
Sbjct: 124 ANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170

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BLAST of CSPI02G02070 vs. ExPASy Swiss-Prot
Match: A1DPK7 (Actin-related protein 2/3 complex subunit 3-A OS=Xenopus laevis OX=8355 GN=arpc3-a PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-36
Identity = 71/151 (47.02%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 21  LLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSAADKLLIYLTFYINVAL 80
           +LP++S  KGPAP   +D TDI+DEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+  L
Sbjct: 21  MLPIRSQFKGPAPRETKD-TDIIDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECL 80

Query: 81  KRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIPQSNEEAELFRNYLKQIREE 140
           K+L+ C +   G K +  LG+ N P+PGE GFP   ++  P + +E E+ R YL+Q+R+E
Sbjct: 81  KKLQKCNSKGQGEKEMYTLGITNFPIPGEPGFPLNAMYVKPSNKQEDEVMRAYLQQLRQE 140

Query: 141 TSGRLLSVAY-RTNGTPNKWWLAFAKRKFMN 171
           T  RL    +      P+KWW  F KR+FMN
Sbjct: 141 TGLRLCDKVFDPQTDKPSKWWTCFVKRQFMN 170

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BLAST of CSPI02G02070 vs. ExPASy TrEMBL
Match: A0A0A0LI55 (Actin-related protein 2/3 complex subunit 3 OS=Cucumis sativus OX=3659 GN=Csa_2G008100 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.1e-96
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI
Sbjct: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 175
           PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 174

[Close]

BLAST of CSPI02G02070 vs. ExPASy TrEMBL
Match: A0A1S3C5N9 (Actin-related protein 2/3 complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103496939 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 7.3e-95
Identity = 172/174 (98.85%), Postives = 172/174 (98.85%), Query Frame = 0


Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKS ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 175
           PQSNEEAELFRNYLKQIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

[Close]

BLAST of CSPI02G02070 vs. ExPASy TrEMBL
Match: A0A6J1HLS5 (Actin-related protein 2/3 complex subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111465702 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.1e-94
Identity = 170/174 (97.70%), Postives = 171/174 (98.28%), Query Frame = 0


Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKS ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGE GFPFPGLFPI
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGELGFPFPGLFPI 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 175
           PQSNEEAELFRNYL+QIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSNEEAELFRNYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

[Close]

BLAST of CSPI02G02070 vs. ExPASy TrEMBL
Match: A0A6J1FCE9 (Actin-related protein 2/3 complex subunit 3 OS=Cucurbita moschata OX=3662 GN=LOC111444343 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.1e-94
Identity = 170/174 (97.70%), Postives = 171/174 (98.28%), Query Frame = 0


Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKS ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGE GFPFPGLFPI
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGELGFPFPGLFPI 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 175
           PQSNEEAELFRNYL+QIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSNEEAELFRNYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

[Close]

BLAST of CSPI02G02070 vs. ExPASy TrEMBL
Match: A0A6J1CN65 (Actin-related protein 2/3 complex subunit 3 OS=Momordica charantia OX=3673 GN=LOC111013027 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.4e-92
Identity = 165/174 (94.83%), Postives = 171/174 (98.28%), Query Frame = 0


Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MVHHSSFVDEEG++KACGCPLLPLKSHIKGPAPVSD+DKTDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKS ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE+VPVPGE GFPFPGLFPI
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPI 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 175
           PQSNEEA++FRNYLKQIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

[Close]

BLAST of CSPI02G02070 vs. NCBI nr
Match: XP_011648714.1 (actin-related protein 2/3 complex subunit 3 [Cucumis sativus] >KGN60719.1 hypothetical protein Csa_019304 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 1.0e-95
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI
Sbjct: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 175
           PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 174

[Close]

BLAST of CSPI02G02070 vs. NCBI nr
Match: XP_038889879.1 (actin-related protein 2/3 complex subunit 3 [Benincasa hispida] >XP_038889880.1 actin-related protein 2/3 complex subunit 3 [Benincasa hispida])

HSP 1 Score: 356.7 bits (914), Expect = 1.2e-94
Identity = 172/174 (98.85%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKS ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 175
           PQSNEEAELFRNYLKQIREETSGRLLSVAYR+NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRSNGTPNKWWLAFAKRKFMNIIIP 174

[Close]

BLAST of CSPI02G02070 vs. NCBI nr
Match: XP_008457213.1 (PREDICTED: actin-related protein 2/3 complex subunit 3 [Cucumis melo])

HSP 1 Score: 356.3 bits (913), Expect = 1.5e-94
Identity = 172/174 (98.85%), Postives = 172/174 (98.85%), Query Frame = 0


Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKS ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 175
           PQSNEEAELFRNYLKQIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

[Close]

BLAST of CSPI02G02070 vs. NCBI nr
Match: XP_022938181.1 (actin-related protein 2/3 complex subunit 3 isoform X1 [Cucurbita moschata] >XP_022965982.1 actin-related protein 2/3 complex subunit 3 [Cucurbita maxima] >KAG6586375.1 Actin-related protein 2/3 complex subunit 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 352.8 bits (904), Expect = 1.7e-93
Identity = 170/174 (97.70%), Postives = 171/174 (98.28%), Query Frame = 0


Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKS ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGE GFPFPGLFPI
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGELGFPFPGLFPI 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 175
           PQSNEEAELFRNYL+QIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSNEEAELFRNYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

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BLAST of CSPI02G02070 vs. NCBI nr
Match: XP_023536665.1 (actin-related protein 2/3 complex subunit 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 351.7 bits (901), Expect = 3.7e-93
Identity = 169/174 (97.13%), Postives = 171/174 (98.28%), Query Frame = 0


Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKS ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGE GFPFPGLFPI
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGELGFPFPGLFPI 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 175
           PQSNEEA+LFRNYL+QIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSNEEADLFRNYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

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BLAST of CSPI02G02070 vs. TAIR 10
Match: AT1G60430.1 (actin-related protein C3 )

HSP 1 Score: 333.2 bits (853), Expect = 1.3e-91
Identity = 155/173 (89.60%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MV+HSSFVDEEG++KACGCPLLPLKSHIKGPAPVS+QDKTDIVDEAITFFRANVFF NFD
Sbjct: 1   MVYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFD 60

Query: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKS ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE++PVPGE+GFPFPGLF +
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSL 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIII 174
           PQS +EAELFRNYLKQ+REETSGRLLSVAYR NGTPNKWWLAFAKRKFMN+++
Sbjct: 121 PQSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNVVV 173

[Close]

BLAST of CSPI02G02070 vs. TAIR 10
Match: AT1G60430.2 (actin-related protein C3 )

HSP 1 Score: 333.2 bits (853), Expect = 1.3e-91
Identity = 155/173 (89.60%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MV+HSSFVDEEG++KACGCPLLPLKSHIKGPAPVS+QDKTDIVDEAITFFRANVFF NFD
Sbjct: 1   MVYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFD 60

Query: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKS ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE++PVPGE+GFPFPGLF +
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSL 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIII 174
           PQS +EAELFRNYLKQ+REETSGRLLSVAYR NGTPNKWWLAFAKRKFMN+++
Sbjct: 121 PQSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNVVV 173

The following BLAST results are available for this feature:

BLAST of CSPI02G02070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1ECJ7	1.8e-90	89.60	Actin-related protein 2/3 complex subunit 3 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q9JM76	4.2e-39	47.65	Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE...	[more]
Q3T035	5.5e-39	47.06	Actin-related protein 2/3 complex subunit 3 OS=Bos taurus OX=9913 GN=ARPC3 PE=1 ...	[more]
O15145	5.5e-39	47.06	Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens OX=9606 GN=ARPC3 PE=...	[more]
A1DPK7	1.5e-36	47.02	Actin-related protein 2/3 complex subunit 3-A OS=Xenopus laevis OX=8355 GN=arpc3...	[more]

BLAST of CSPI02G02070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI55	5.1e-96	100.00	Actin-related protein 2/3 complex subunit 3 OS=Cucumis sativus OX=3659 GN=Csa_2G...	[more]
A0A1S3C5N9	7.3e-95	98.85	Actin-related protein 2/3 complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
A0A6J1HLS5	8.1e-94	97.70	Actin-related protein 2/3 complex subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FCE9	8.1e-94	97.70	Actin-related protein 2/3 complex subunit 3 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1CN65	4.4e-92	94.83	Actin-related protein 2/3 complex subunit 3 OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of CSPI02G02070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648714.1	1.0e-95	100.00	actin-related protein 2/3 complex subunit 3 [Cucumis sativus] >KGN60719.1 hypoth...	[more]
XP_038889879.1	1.2e-94	98.85	actin-related protein 2/3 complex subunit 3 [Benincasa hispida] >XP_038889880.1 ...	[more]
XP_008457213.1	1.5e-94	98.85	PREDICTED: actin-related protein 2/3 complex subunit 3 [Cucumis melo]	[more]
XP_022938181.1	1.7e-93	97.70	actin-related protein 2/3 complex subunit 3 isoform X1 [Cucurbita moschata] >XP_...	[more]
XP_023536665.1	3.7e-93	97.13	actin-related protein 2/3 complex subunit 3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI02G02070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60430.1	1.3e-91	89.60	actin-related protein C3	[more]
AT1G60430.2	1.3e-91	89.60	actin-related protein C3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036753	Actin-related protein 2/3 complex subunit 3 superfamily	GENE3D	1.10.1760.10		coord: 1..173 e-value: 4.1E-66 score: 224.1
IPR036753	Actin-related protein 2/3 complex subunit 3 superfamily	SUPERFAMILY	69060	Arp2/3 complex 21 kDa subunit ARPC3	coord: 3..170
IPR007204	Actin-related protein 2/3 complex subunit 3	PFAM	PF04062	P21-Arc	coord: 2..170 e-value: 4.5E-63 score: 212.4
IPR007204	Actin-related protein 2/3 complex subunit 3	PIRSF	PIRSF016315	p21-ARC	coord: 1..173 e-value: 2.5E-68 score: 227.3
IPR007204	Actin-related protein 2/3 complex subunit 3	PANTHER	PTHR12391	ARP2/3 COMPLEX 21 KD SUBUNIT	coord: 1..171
None	No IPR available	PANTHER	PTHR12391:SF0	ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 3	coord: 1..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G02070.1	CSPI02G02070.1	mRNA
CSPI02G02070.2	CSPI02G02070.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034314	Arp2/3 complex-mediated actin nucleation
biological_process	GO:0030833	regulation of actin filament polymerization
cellular_component	GO:0005885	Arp2/3 protein complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0051015	actin filament binding