CSPI02G01780 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCTAAAAAGCCCATCAACTCCAATTCTCAATACATGGAAACCCCATTTCAAAGAATCCTCTCCGGAGACTGTAATCCTCCACCAATTTTGTAAATCACGGCTCCCCACACTCTCTGCTTCTTCGAAATTGTTGCCGGCGCCATGCATGATCGGCGGTCAGGCGATCAAGACGATGCTGAGTAACATTTCAGTGGTGGCGAAGAGGATTCCGAGAATGGCGGTTTTGGATGAGGGATTGTGCTGTGGTGTGGATGACGTAGGGGAGAGTTCCGATTGCGGTGGCGAAATGGTCGGTGGTTTTGTTGATGGTAAAGTCAACCGTGATGGTTGTAATGGCAATGACAATGGGAATGGTGGTTGTTTTGTTTCTTGGGATGGGGATACTGAAGAGGACATGGCGGAAATGCATTTTCAGAGAATGATAAAGACGAACCCCAAGGATTCGTTGTTACTAAGCAATTATGCTCAGTTCTTGAAGGAGGTACGTTGTATGAGAATTGAAATTACTATCTTTTTTTAATTTGATTCAAATTTTTTTAACTTTACGTTTGGAGATGATCATTCATTTTATTTTCTCTATTAGATGGAGATATGGAAATCTTGTTGTCTCAAATAGAAGTTCTTGCAAAATCTTGTTCTGATCCTTTACCATTGTCCATTCCTTTTCTTGGTGTTTGTACGAATCTTGATCTTGATCGCCTGAAATTATGTTATTTAAAAGATCTTGAATCTGCATTTGTTTCTTAGAACTTTTGGGTTAGAATAGGCCGGGTTTGAAATATATACTAGAAGATGAACAAAGTGGATTTTAGGAATCGTTTTGTGTTAAAAAAAAAATACACAACACGCTAGAATTGATGTAATCTTTACGAAAGCAAAGATTTGATTCTTGAAACTTTTCAATTTTTAACAATTTAGTCTTTTGGAGAACTAACAAATCTCAATAGATCTTTCTAAAATTTGAAAGTACAATTGGTTTTTCTATTGAAGTTGCTACAAGAATGTAAAATGCATTGGGCGTAAAGTTTGAACTATTGTTTATTCTCAAGCAATTTGTTGACTTTATCTGCTAATAAACAGGTTCGTGGAGACCTTATAAAAGCTGAAGAGTATTGTGGAAGAGCAATGTTAGCACGAGGCAATAATGGAAGTGTCATATCAATGTATGCCGATTTGATATGGAGTAATTATATGGATGCCTCCCGAGCTGAGAGTTACCATCTTCAAGCTACTAAAACTTCCCCCGATAATAGGTATGAAAAAACTAAATCTAATATAATCACCCAATCGGAGCATATATAGCTTAATAACGTGGATAACGAACACCAATTATCATTTCAGAAGAACGATCAAAACTTTTGATGATCTGCAAGAGAAAGAGAGCTTTCTGTTTAACTCCATCTGCTAATTGGGACATTGTAATTGATTTGTTGGGTTAATCTTGTCTTGTTTGTTTAACTGGTACGGTGCAGTTTTGTTTTTGCTGCTTATGCACGGTTTCTCTGGGAGGTTGAGAAAGAAGTGGACAAGGGAGAAGCTGAAACGGACAGCTTTGGTGGCAACCCATTCTCTCCTCCTCCTTGTTTTGGACCTCAGTCTCATCCGACTCCTCCTCCTGATTCTTAGTTTCTCTCTCAAGTACATTTATATAATGAGTGCAGATTTTCTTAGGAAGTCTTTCTTTATACACAGAAAGCTCTAATGATTTTTTTTCCCCTCACCAATTTGATTCTCAATTTGTGCTTTGTTTGTGTATAGACAATGCAGCAAACAAAGAATCTCAATTTTGCAAAGGATCTTCCTCTCTCGAAGATTAGAAATATGGGTACATCGAGTGGCCGTTAGGGGCCAAATAAATAATAGAATGTCATGGTAGTTACATTTACATAGGATTTAATGTTCAATCAATGATACTTTACATATTGGTGAAGTTGTCTCCCATATTTTCTTAGACGGGGTTAAACATATATCTTTTAATATTTCATAAACGAAA ATGCTTCTAAAAAGCCCATCAACTCCAATTCTCAATACATGGAAACCCCATTTCAAAGAATCCTCTCCGGAGACTGTAATCCTCCACCAATTTTGTAAATCACGGCTCCCCACACTCTCTGCTTCTTCGAAATTGTTGCCGGCGCCATGCATGATCGGCGGTCAGGCGATCAAGACGATGCTGAGTAACATTTCAGTGGTGGCGAAGAGGATTCCGAGAATGGCGGTTTTGGATGAGGGATTGTGCTGTGGTGTGGATGACGTAGGGGAGAGTTCCGATTGCGGTGGCGAAATGGTCGGTGGTTTTGTTGATGGTAAAGTCAACCGTGATGGTTGTAATGGCAATGACAATGGGAATGGTGGTTGTTTTGTTTCTTGGGATGGGGATACTGAAGAGGACATGGCGGAAATGCATTTTCAGAGAATGATAAAGACGAACCCCAAGGATTCGTTGTTACTAAGCAATTATGCTCAGTTCTTGAAGGAGGTTCGTGGAGACCTTATAAAAGCTGAAGAGTATTGTGGAAGAGCAATGTTAGCACGAGGCAATAATGGAAGTGTCATATCAATGTATGCCGATTTGATATGGAGTAATTATATGGATGCCTCCCGAGCTGAGAGTTACCATCTTCAAGCTACTAAAACTTCCCCCGATAATAGTTTTGTTTTTGCTGCTTATGCACGGTTTCTCTGGGAGGTTGAGAAAGAAGTGGACAAGGGAGAAGCTGAAACGGACAGCTTTGGTGGCAACCCATTCTCTCCTCCTCCTTGTTTTGGACCTCAGTCTCATCCGACTCCTCCTCCTGATTCTTAGTTTCTCTCTCAAGTACATTTATATAATGAGTGCAGATTTTCTTAGGAAGTCTTTCTTTATACACAGAAAGCTCTAATGATTTTTTTTCCCCTCACCAATTTGATTCTCAATTTGTGCTTTGTTTGTGTATAGACAATGCAGCAAACAAAGAATCTCAATTTTGCAAAGGATCTTCCTCTCTCGAAGATTAGAAATATGGGTACATCGAGTGGCCGTTAGGGGCCAAATAAATAATAGAATGTCATGGTAGTTACATTTACATAGGATTTAATGTTCAATCAATGATACTTTACATATTGGTGAAGTTGTCTCCCATATTTTCTTAGACGGGGTTAAACATATATCTTTTAATATTTCATAAACGAAA ATGCTTCTAAAAAGCCCATCAACTCCAATTCTCAATACATGGAAACCCCATTTCAAAGAATCCTCTCCGGAGACTGTAATCCTCCACCAATTTTGTAAATCACGGCTCCCCACACTCTCTGCTTCTTCGAAATTGTTGCCGGCGCCATGCATGATCGGCGGTCAGGCGATCAAGACGATGCTGAGTAACATTTCAGTGGTGGCGAAGAGGATTCCGAGAATGGCGGTTTTGGATGAGGGATTGTGCTGTGGTGTGGATGACGTAGGGGAGAGTTCCGATTGCGGTGGCGAAATGGTCGGTGGTTTTGTTGATGGTAAAGTCAACCGTGATGGTTGTAATGGCAATGACAATGGGAATGGTGGTTGTTTTGTTTCTTGGGATGGGGATACTGAAGAGGACATGGCGGAAATGCATTTTCAGAGAATGATAAAGACGAACCCCAAGGATTCGTTGTTACTAAGCAATTATGCTCAGTTCTTGAAGGAGGTTCGTGGAGACCTTATAAAAGCTGAAGAGTATTGTGGAAGAGCAATGTTAGCACGAGGCAATAATGGAAGTGTCATATCAATGTATGCCGATTTGATATGGAGTAATTATATGGATGCCTCCCGAGCTGAGAGTTACCATCTTCAAGCTACTAAAACTTCCCCCGATAATAGTTTTGTTTTTGCTGCTTATGCACGGTTTCTCTGGGAGGTTGAGAAAGAAGTGGACAAGGGAGAAGCTGAAACGGACAGCTTTGGTGGCAACCCATTCTCTCCTCCTCCTTGTTTTGGACCTCAGTCTCATCCGACTCCTCCTCCTGATTCTTAG MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTMLSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDNGNGGCFVSWDGDTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKEVDKGEAETDSFGGNPFSPPPCFGPQSHPTPPPDS* Homology
BLAST of CSPI02G01780 vs. ExPASy TrEMBL
Match: A0A0A0LL02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006810 PE=4 SV=1) HSP 1 Score: 553.1 bits (1424), Expect = 6.3e-154 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0
BLAST of CSPI02G01780 vs. ExPASy TrEMBL
Match: A0A5D3BDH3 (Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00320 PE=4 SV=1) HSP 1 Score: 382.5 bits (981), Expect = 1.5e-102 Identity = 205/257 (79.77%), Postives = 213/257 (82.88%), Query Frame = 0
BLAST of CSPI02G01780 vs. ExPASy TrEMBL
Match: A0A5A7V554 (EIN3-binding F-box protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001810 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 4.4e-99 Identity = 195/240 (81.25%), Postives = 201/240 (83.75%), Query Frame = 0
BLAST of CSPI02G01780 vs. ExPASy TrEMBL
Match: A0A6J1KGA4 (uncharacterized protein LOC111493633 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493633 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 2.1e-77 Identity = 166/280 (59.29%), Postives = 197/280 (70.36%), Query Frame = 0
BLAST of CSPI02G01780 vs. ExPASy TrEMBL
Match: A0A6J1G2S9 (uncharacterized protein LOC111450271 OS=Cucurbita moschata OX=3662 GN=LOC111450271 PE=4 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 3.8e-74 Identity = 163/273 (59.71%), Postives = 193/273 (70.70%), Query Frame = 0
BLAST of CSPI02G01780 vs. NCBI nr
Match: XP_011648683.2 (uncharacterized protein LOC105434540 [Cucumis sativus] >KGN60686.1 hypothetical protein Csa_019377 [Cucumis sativus]) HSP 1 Score: 553.1 bits (1424), Expect = 1.3e-153 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0
BLAST of CSPI02G01780 vs. NCBI nr
Match: TYJ97822.1 (putative Tetratricopeptide repeat-like superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 382.5 bits (981), Expect = 3.0e-102 Identity = 205/257 (79.77%), Postives = 213/257 (82.88%), Query Frame = 0
BLAST of CSPI02G01780 vs. NCBI nr
Match: KAA0061616.1 (EIN3-binding F-box protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 370.9 bits (951), Expect = 9.2e-99 Identity = 195/240 (81.25%), Postives = 201/240 (83.75%), Query Frame = 0
BLAST of CSPI02G01780 vs. NCBI nr
Match: KAG6599396.1 (hypothetical protein SDJN03_09174, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030381.1 hypothetical protein SDJN02_08728 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 307.4 bits (786), Expect = 1.2e-79 Identity = 171/276 (61.96%), Postives = 198/276 (71.74%), Query Frame = 0
BLAST of CSPI02G01780 vs. NCBI nr
Match: XP_023545630.1 (uncharacterized protein LOC111805006 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 302.8 bits (774), Expect = 3.1e-78 Identity = 170/278 (61.15%), Postives = 197/278 (70.86%), Query Frame = 0
BLAST of CSPI02G01780 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 139.8 bits (351), Expect = 3.2e-33 Identity = 99/270 (36.67%), Postives = 152/270 (56.30%), Query Frame = 0
BLAST of CSPI02G01780 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 136.7 bits (343), Expect = 2.7e-32 Identity = 109/298 (36.58%), Postives = 151/298 (50.67%), Query Frame = 0
BLAST of CSPI02G01780 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 132.9 bits (333), Expect = 3.9e-31 Identity = 70/152 (46.05%), Postives = 101/152 (66.45%), Query Frame = 0
BLAST of CSPI02G01780 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 105.5 bits (262), Expect = 6.7e-23 Identity = 64/168 (38.10%), Postives = 92/168 (54.76%), Query Frame = 0
BLAST of CSPI02G01780 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 81.3 bits (199), Expect = 1.4e-15 Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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