CSPI02G01780 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G01780
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
LocationChr2: 1234536 .. 1236533 (+)
RNA-Seq ExpressionCSPI02G01780
SyntenyCSPI02G01780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCTAAAAAGCCCATCAACTCCAATTCTCAATACATGGAAACCCCATTTCAAAGAATCCTCTCCGGAGACTGTAATCCTCCACCAATTTTGTAAATCACGGCTCCCCACACTCTCTGCTTCTTCGAAATTGTTGCCGGCGCCATGCATGATCGGCGGTCAGGCGATCAAGACGATGCTGAGTAACATTTCAGTGGTGGCGAAGAGGATTCCGAGAATGGCGGTTTTGGATGAGGGATTGTGCTGTGGTGTGGATGACGTAGGGGAGAGTTCCGATTGCGGTGGCGAAATGGTCGGTGGTTTTGTTGATGGTAAAGTCAACCGTGATGGTTGTAATGGCAATGACAATGGGAATGGTGGTTGTTTTGTTTCTTGGGATGGGGATACTGAAGAGGACATGGCGGAAATGCATTTTCAGAGAATGATAAAGACGAACCCCAAGGATTCGTTGTTACTAAGCAATTATGCTCAGTTCTTGAAGGAGGTACGTTGTATGAGAATTGAAATTACTATCTTTTTTTAATTTGATTCAAATTTTTTTAACTTTACGTTTGGAGATGATCATTCATTTTATTTTCTCTATTAGATGGAGATATGGAAATCTTGTTGTCTCAAATAGAAGTTCTTGCAAAATCTTGTTCTGATCCTTTACCATTGTCCATTCCTTTTCTTGGTGTTTGTACGAATCTTGATCTTGATCGCCTGAAATTATGTTATTTAAAAGATCTTGAATCTGCATTTGTTTCTTAGAACTTTTGGGTTAGAATAGGCCGGGTTTGAAATATATACTAGAAGATGAACAAAGTGGATTTTAGGAATCGTTTTGTGTTAAAAAAAAAATACACAACACGCTAGAATTGATGTAATCTTTACGAAAGCAAAGATTTGATTCTTGAAACTTTTCAATTTTTAACAATTTAGTCTTTTGGAGAACTAACAAATCTCAATAGATCTTTCTAAAATTTGAAAGTACAATTGGTTTTTCTATTGAAGTTGCTACAAGAATGTAAAATGCATTGGGCGTAAAGTTTGAACTATTGTTTATTCTCAAGCAATTTGTTGACTTTATCTGCTAATAAACAGGTTCGTGGAGACCTTATAAAAGCTGAAGAGTATTGTGGAAGAGCAATGTTAGCACGAGGCAATAATGGAAGTGTCATATCAATGTATGCCGATTTGATATGGAGTAATTATATGGATGCCTCCCGAGCTGAGAGTTACCATCTTCAAGCTACTAAAACTTCCCCCGATAATAGGTATGAAAAAACTAAATCTAATATAATCACCCAATCGGAGCATATATAGCTTAATAACGTGGATAACGAACACCAATTATCATTTCAGAAGAACGATCAAAACTTTTGATGATCTGCAAGAGAAAGAGAGCTTTCTGTTTAACTCCATCTGCTAATTGGGACATTGTAATTGATTTGTTGGGTTAATCTTGTCTTGTTTGTTTAACTGGTACGGTGCAGTTTTGTTTTTGCTGCTTATGCACGGTTTCTCTGGGAGGTTGAGAAAGAAGTGGACAAGGGAGAAGCTGAAACGGACAGCTTTGGTGGCAACCCATTCTCTCCTCCTCCTTGTTTTGGACCTCAGTCTCATCCGACTCCTCCTCCTGATTCTTAGTTTCTCTCTCAAGTACATTTATATAATGAGTGCAGATTTTCTTAGGAAGTCTTTCTTTATACACAGAAAGCTCTAATGATTTTTTTTCCCCTCACCAATTTGATTCTCAATTTGTGCTTTGTTTGTGTATAGACAATGCAGCAAACAAAGAATCTCAATTTTGCAAAGGATCTTCCTCTCTCGAAGATTAGAAATATGGGTACATCGAGTGGCCGTTAGGGGCCAAATAAATAATAGAATGTCATGGTAGTTACATTTACATAGGATTTAATGTTCAATCAATGATACTTTACATATTGGTGAAGTTGTCTCCCATATTTTCTTAGACGGGGTTAAACATATATCTTTTAATATTTCATAAACGAAA

mRNA sequence

ATGCTTCTAAAAAGCCCATCAACTCCAATTCTCAATACATGGAAACCCCATTTCAAAGAATCCTCTCCGGAGACTGTAATCCTCCACCAATTTTGTAAATCACGGCTCCCCACACTCTCTGCTTCTTCGAAATTGTTGCCGGCGCCATGCATGATCGGCGGTCAGGCGATCAAGACGATGCTGAGTAACATTTCAGTGGTGGCGAAGAGGATTCCGAGAATGGCGGTTTTGGATGAGGGATTGTGCTGTGGTGTGGATGACGTAGGGGAGAGTTCCGATTGCGGTGGCGAAATGGTCGGTGGTTTTGTTGATGGTAAAGTCAACCGTGATGGTTGTAATGGCAATGACAATGGGAATGGTGGTTGTTTTGTTTCTTGGGATGGGGATACTGAAGAGGACATGGCGGAAATGCATTTTCAGAGAATGATAAAGACGAACCCCAAGGATTCGTTGTTACTAAGCAATTATGCTCAGTTCTTGAAGGAGGTTCGTGGAGACCTTATAAAAGCTGAAGAGTATTGTGGAAGAGCAATGTTAGCACGAGGCAATAATGGAAGTGTCATATCAATGTATGCCGATTTGATATGGAGTAATTATATGGATGCCTCCCGAGCTGAGAGTTACCATCTTCAAGCTACTAAAACTTCCCCCGATAATAGTTTTGTTTTTGCTGCTTATGCACGGTTTCTCTGGGAGGTTGAGAAAGAAGTGGACAAGGGAGAAGCTGAAACGGACAGCTTTGGTGGCAACCCATTCTCTCCTCCTCCTTGTTTTGGACCTCAGTCTCATCCGACTCCTCCTCCTGATTCTTAGTTTCTCTCTCAAGTACATTTATATAATGAGTGCAGATTTTCTTAGGAAGTCTTTCTTTATACACAGAAAGCTCTAATGATTTTTTTTCCCCTCACCAATTTGATTCTCAATTTGTGCTTTGTTTGTGTATAGACAATGCAGCAAACAAAGAATCTCAATTTTGCAAAGGATCTTCCTCTCTCGAAGATTAGAAATATGGGTACATCGAGTGGCCGTTAGGGGCCAAATAAATAATAGAATGTCATGGTAGTTACATTTACATAGGATTTAATGTTCAATCAATGATACTTTACATATTGGTGAAGTTGTCTCCCATATTTTCTTAGACGGGGTTAAACATATATCTTTTAATATTTCATAAACGAAA

Coding sequence (CDS)

ATGCTTCTAAAAAGCCCATCAACTCCAATTCTCAATACATGGAAACCCCATTTCAAAGAATCCTCTCCGGAGACTGTAATCCTCCACCAATTTTGTAAATCACGGCTCCCCACACTCTCTGCTTCTTCGAAATTGTTGCCGGCGCCATGCATGATCGGCGGTCAGGCGATCAAGACGATGCTGAGTAACATTTCAGTGGTGGCGAAGAGGATTCCGAGAATGGCGGTTTTGGATGAGGGATTGTGCTGTGGTGTGGATGACGTAGGGGAGAGTTCCGATTGCGGTGGCGAAATGGTCGGTGGTTTTGTTGATGGTAAAGTCAACCGTGATGGTTGTAATGGCAATGACAATGGGAATGGTGGTTGTTTTGTTTCTTGGGATGGGGATACTGAAGAGGACATGGCGGAAATGCATTTTCAGAGAATGATAAAGACGAACCCCAAGGATTCGTTGTTACTAAGCAATTATGCTCAGTTCTTGAAGGAGGTTCGTGGAGACCTTATAAAAGCTGAAGAGTATTGTGGAAGAGCAATGTTAGCACGAGGCAATAATGGAAGTGTCATATCAATGTATGCCGATTTGATATGGAGTAATTATATGGATGCCTCCCGAGCTGAGAGTTACCATCTTCAAGCTACTAAAACTTCCCCCGATAATAGTTTTGTTTTTGCTGCTTATGCACGGTTTCTCTGGGAGGTTGAGAAAGAAGTGGACAAGGGAGAAGCTGAAACGGACAGCTTTGGTGGCAACCCATTCTCTCCTCCTCCTTGTTTTGGACCTCAGTCTCATCCGACTCCTCCTCCTGATTCTTAG

Protein sequence

MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTMLSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDNGNGGCFVSWDGDTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKEVDKGEAETDSFGGNPFSPPPCFGPQSHPTPPPDS*
Homology
BLAST of CSPI02G01780 vs. ExPASy TrEMBL
Match: A0A0A0LL02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006810 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 6.3e-154
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0

Query: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60
           MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM
Sbjct: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60

Query: 61  LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDNGNG 120
           LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDNGNG
Sbjct: 61  LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDNGNG 120

Query: 121 GCFVSWDGDTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLA 180
           GCFVSWDGDTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLA
Sbjct: 121 GCFVSWDGDTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLA 180

Query: 181 RGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKEVDKG 240
           RGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKEVDKG
Sbjct: 181 RGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKEVDKG 240

Query: 241 EAETDSFGGNPFSPPPCFGPQSHPTPPPDS 271
           EAETDSFGGNPFSPPPCFGPQSHPTPPPDS
Sbjct: 241 EAETDSFGGNPFSPPPCFGPQSHPTPPPDS 270

BLAST of CSPI02G01780 vs. ExPASy TrEMBL
Match: A0A5D3BDH3 (Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00320 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.5e-102
Identity = 205/257 (79.77%), Postives = 213/257 (82.88%), Query Frame = 0

Query: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60
           MLL+SPST ILN WKPHFKESS ETVILHQF KSRL TLSASSKLLP P MIG       
Sbjct: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIG------- 60

Query: 61  LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDN--- 120
                      P + +   GLCCGVDDVGESSDCG EMVGGFVDGK N +G NGNDN   
Sbjct: 61  -----------PGIKMKMMGLCCGVDDVGESSDCGAEMVGGFVDGKFNCNG-NGNDNDNG 120

Query: 121 GNGGCFVSWDGD-TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR 180
           G+GGCF SWDGD TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR
Sbjct: 121 GDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR 180

Query: 181 AMLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKE 240
           AMLARGNNGSVISMYA+LIWSN+MDASRAESYHLQATKTSPDNSFVFAAYARFLWEV+KE
Sbjct: 181 AMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKE 238

Query: 241 VDKGEAETDSFGGNPFS 254
           V  GEA  D FGGNPFS
Sbjct: 241 VLDGEALMDIFGGNPFS 238

BLAST of CSPI02G01780 vs. ExPASy TrEMBL
Match: A0A5A7V554 (EIN3-binding F-box protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001810 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 4.4e-99
Identity = 195/240 (81.25%), Postives = 201/240 (83.75%), Query Frame = 0

Query: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60
           MLL+SPST ILN WKPHFKESS ETVILHQF KSRL TLSASSKLLP P MIG       
Sbjct: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMIG------- 60

Query: 61  LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDNGN- 120
                      P + +   GLCCGVDDVGESSDCG EMVGGFVDGK NRD CNGN NGN 
Sbjct: 61  -----------PGIKMKMMGLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNGNGNG 120

Query: 121 --GGCFVSWDGD-TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR 180
             GGCF SWDGD TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR
Sbjct: 121 GDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR 180

Query: 181 AMLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKE 237
           AMLARGNNGSVISMYA+LIWSN+MDASRAESYHLQATKTSPDNSFVFAAYARFLWEV+KE
Sbjct: 181 AMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKE 222

BLAST of CSPI02G01780 vs. ExPASy TrEMBL
Match: A0A6J1KGA4 (uncharacterized protein LOC111493633 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493633 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 2.1e-77
Identity = 166/280 (59.29%), Postives = 197/280 (70.36%), Query Frame = 0

Query: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60
           MLL+S ST ILN WKPH KESS E  I++Q  KSR  TL ASSKLLP P +IGG AI  M
Sbjct: 1   MLLRSASTSILNPWKPHLKESSMEAEIVNQISKSRSLTLCASSKLLPPPLIIGGPAINMM 60

Query: 61  -------LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGC- 120
                  LSN+S VAKR P    L+ GLCCG+  V  SSDCGG +VG  VDG + RDGC 
Sbjct: 61  RTLSVPDLSNLSAVAKRSP---FLNGGLCCGIAKVRGSSDCGGGVVGVSVDGGIGRDGCG 120

Query: 121 ---NGNDNGNGGCFVSWDGDTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIK 180
               G+D G+ GCF SWD D E D A++++Q+MI+ NP++SLLLSNYA+FL EVRGDL+K
Sbjct: 121 GDGGGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLK 180

Query: 181 AEEYCGRAMLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARF 240
           AEEYCGR++ A  N+G+VISMYADLIW N+ DASRAESYHLQA KTSPD+SFV A+YA+F
Sbjct: 181 AEEYCGRSISANPNDGNVISMYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYAQF 240

Query: 241 LWEVEKEVDKGEAETDSFG--GNPFSPPPC-FGPQSHPTP 267
           LW+  +EV     E D F   G P S  P  FG Q   TP
Sbjct: 241 LWDAGEEVKDDNDEEDGFDSFGKPCSSRPFDFGVQPQLTP 277

BLAST of CSPI02G01780 vs. ExPASy TrEMBL
Match: A0A6J1G2S9 (uncharacterized protein LOC111450271 OS=Cucurbita moschata OX=3662 GN=LOC111450271 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.8e-74
Identity = 163/273 (59.71%), Postives = 193/273 (70.70%), Query Frame = 0

Query: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60
           MLL+S ST ILN WKPH KE+S E  I+HQ  KSR  TL ASSKLLP P MIGG AI  M
Sbjct: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60

Query: 61  -------LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCN 120
                  LSN+S VAKR P    LD GLCCGV +VGESSDCGG+  GG            
Sbjct: 61  RTLSVPDLSNLSAVAKRSP---FLDGGLCCGVAEVGESSDCGGD--GG------------ 120

Query: 121 GNDNGNGGCFVSWDGDTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEY 180
           G+D G+ GCF SWD D E D A++++Q+MI+ NP++SLLLSNYA+FL EVRGDL+KAEEY
Sbjct: 121 GSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEEY 180

Query: 181 CGRAMLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEV 240
           CGR++ A  N+G+VIS+YADLIW N+ DASRAESYHLQA KTSPD+SFV A+YARFLW+ 
Sbjct: 181 CGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWDA 240

Query: 241 EKEV--DKGEAETDSFG--GNPFSPPPC-FGPQ 262
            +EV  D  + E D F   G P+S  P  FG Q
Sbjct: 241 GEEVKDDDDDEEEDGFDSFGEPYSSRPFDFGVQ 256

BLAST of CSPI02G01780 vs. NCBI nr
Match: XP_011648683.2 (uncharacterized protein LOC105434540 [Cucumis sativus] >KGN60686.1 hypothetical protein Csa_019377 [Cucumis sativus])

HSP 1 Score: 553.1 bits (1424), Expect = 1.3e-153
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0

Query: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60
           MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM
Sbjct: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60

Query: 61  LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDNGNG 120
           LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDNGNG
Sbjct: 61  LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDNGNG 120

Query: 121 GCFVSWDGDTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLA 180
           GCFVSWDGDTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLA
Sbjct: 121 GCFVSWDGDTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLA 180

Query: 181 RGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKEVDKG 240
           RGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKEVDKG
Sbjct: 181 RGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKEVDKG 240

Query: 241 EAETDSFGGNPFSPPPCFGPQSHPTPPPDS 271
           EAETDSFGGNPFSPPPCFGPQSHPTPPPDS
Sbjct: 241 EAETDSFGGNPFSPPPCFGPQSHPTPPPDS 270

BLAST of CSPI02G01780 vs. NCBI nr
Match: TYJ97822.1 (putative Tetratricopeptide repeat-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 382.5 bits (981), Expect = 3.0e-102
Identity = 205/257 (79.77%), Postives = 213/257 (82.88%), Query Frame = 0

Query: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60
           MLL+SPST ILN WKPHFKESS ETVILHQF KSRL TLSASSKLLP P MIG       
Sbjct: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIG------- 60

Query: 61  LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDN--- 120
                      P + +   GLCCGVDDVGESSDCG EMVGGFVDGK N +G NGNDN   
Sbjct: 61  -----------PGIKMKMMGLCCGVDDVGESSDCGAEMVGGFVDGKFNCNG-NGNDNDNG 120

Query: 121 GNGGCFVSWDGD-TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR 180
           G+GGCF SWDGD TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR
Sbjct: 121 GDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR 180

Query: 181 AMLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKE 240
           AMLARGNNGSVISMYA+LIWSN+MDASRAESYHLQATKTSPDNSFVFAAYARFLWEV+KE
Sbjct: 181 AMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKE 238

Query: 241 VDKGEAETDSFGGNPFS 254
           V  GEA  D FGGNPFS
Sbjct: 241 VLDGEALMDIFGGNPFS 238

BLAST of CSPI02G01780 vs. NCBI nr
Match: KAA0061616.1 (EIN3-binding F-box protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 370.9 bits (951), Expect = 9.2e-99
Identity = 195/240 (81.25%), Postives = 201/240 (83.75%), Query Frame = 0

Query: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60
           MLL+SPST ILN WKPHFKESS ETVILHQF KSRL TLSASSKLLP P MIG       
Sbjct: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMIG------- 60

Query: 61  LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDNGN- 120
                      P + +   GLCCGVDDVGESSDCG EMVGGFVDGK NRD CNGN NGN 
Sbjct: 61  -----------PGIKMKMMGLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNGNGNG 120

Query: 121 --GGCFVSWDGD-TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR 180
             GGCF SWDGD TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR
Sbjct: 121 GDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGR 180

Query: 181 AMLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKE 237
           AMLARGNNGSVISMYA+LIWSN+MDASRAESYHLQATKTSPDNSFVFAAYARFLWEV+KE
Sbjct: 181 AMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKE 222

BLAST of CSPI02G01780 vs. NCBI nr
Match: KAG6599396.1 (hypothetical protein SDJN03_09174, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030381.1 hypothetical protein SDJN02_08728 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 307.4 bits (786), Expect = 1.2e-79
Identity = 171/276 (61.96%), Postives = 198/276 (71.74%), Query Frame = 0

Query: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60
           MLL+S ST ILN WKPH KE+S E  I+HQ  KSR  TL ASSKLLP P MIGG AI  M
Sbjct: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60

Query: 61  -------LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGC- 120
                  LSN+S VAKR P    LD GLCCGV +VGESSDCGG MVG  VDG +  DGC 
Sbjct: 61  RTLSVPDLSNLSAVAKRSP---FLDGGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCG 120

Query: 121 ---NGNDNGNGGCFVSWDGDTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIK 180
               G+D G+ GCF SWD D E D A++++Q+MI+ NP++SLLLSNYA+FL EVRGDL+K
Sbjct: 121 GDGGGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLK 180

Query: 181 AEEYCGRAMLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARF 240
           AEEYCGR++ A  N+G+VIS+YADLIW N+ DASRAESYHLQA KTSPD+SFV A+YARF
Sbjct: 181 AEEYCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARF 240

Query: 241 LW----EVEKEVDKGEAETDSFGGNPFSPPPCFGPQ 262
           LW    EVE + D  E   DSFG    S P  FG Q
Sbjct: 241 LWDAGEEVEDDDDNEEDGFDSFGEPYSSRPFDFGVQ 273

BLAST of CSPI02G01780 vs. NCBI nr
Match: XP_023545630.1 (uncharacterized protein LOC111805006 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.8 bits (774), Expect = 3.1e-78
Identity = 170/278 (61.15%), Postives = 197/278 (70.86%), Query Frame = 0

Query: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60
           MLL+S ST ILN WKPH KE+S E  I HQ  KSR  TL ASSKLLP P MIGG AI  M
Sbjct: 1   MLLRSASTSILNPWKPHLKEASMEAEIAHQIPKSRPLTLCASSKLLPPPPMIGGPAINMM 60

Query: 61  -------LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGC- 120
                  LSN+S VAKR P    L+ GL CGV +VGESSDCGG MVG  VDG + RDGC 
Sbjct: 61  RTLSVPDLSNLSAVAKRSP---FLNGGLFCGVAEVGESSDCGGGMVGVSVDGGIGRDGCG 120

Query: 121 ---NGNDNGNGGCFVSWDGDTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIK 180
               G+D G+ GCF SWD D E D A++++Q+MI+ NP++SLLLSNYA+FL EVRGDL+K
Sbjct: 121 GDGGGSDGGDDGCFGSWDADRENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLK 180

Query: 181 AEEYCGRAMLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARF 240
           AEEYCGR++ A  N+G+VISMYADLIW N+ DASRAESYHLQA KTSPD+SFV A+YARF
Sbjct: 181 AEEYCGRSISANPNDGNVISMYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARF 240

Query: 241 LWEVEKEV------DKGEAETDSFGGNPFSPPPCFGPQ 262
           LW+  +EV      D  E   DSFG    S P  FG Q
Sbjct: 241 LWDAGEEVEDDDDDDDKEDGFDSFGEPYSSRPFDFGVQ 275

BLAST of CSPI02G01780 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 139.8 bits (351), Expect = 3.2e-33
Identity = 99/270 (36.67%), Postives = 152/270 (56.30%), Query Frame = 0

Query: 1   MLLKSPSTPILNT--WKPHFKESSPETV-ILHQFCKSRLPTLSA-SSKLLPAPCMI---- 60
           MLL+S STP+LN+       ++S  ETV  +HQ  + R  TLSA SS    +P  +    
Sbjct: 1   MLLRSASTPLLNSLVHVSSPRDSPIETVESVHQIQRHRSITLSASSSSCCYSPMSVHSSD 60

Query: 61  ----------GGQAIKTMLSNISVVAKRIPRMAVL---DEGLCCGV------DDVGESSD 120
                         ++ + S    V+K +   A++   DEG+  G+      D +  + D
Sbjct: 61  DSSRRMKRTASDSDLRHLTSTKPPVSKFLSGGALMEDVDEGIGFGLIRTSSYDGISWALD 120

Query: 121 CGGEMVGGFVDGKVNRDGCNGNDNGNGGCFVSWDGDTEEDMAEMHFQRMIKTNPKDSLLL 180
              E+ GG   G  +  G  G   G      S  GD  +D  ++H+++MI+ NP + + L
Sbjct: 121 EDTEVAGGGGGGMFHGGG-KGRSGGR-----SDGGDGGDDNTDVHYRKMIEANPGNGIFL 180

Query: 181 SNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYADLIWSNYMDASRAESYHLQAT 240
           SNYA+FLKEVR D +KAEEYCGRA+L   N+G+V++MYA+L+W  + D+SRAE+Y  QA 
Sbjct: 181 SNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELVWKIHKDSSRAENYFNQAV 240

Query: 241 KTSPDNSFVFAAYARFLWEVEKEVDKGEAE 244
             +P++ +V A+YARFLW+ E+E ++ + E
Sbjct: 241 AAAPEDCYVQASYARFLWDAEEEEEEEKEE 264

BLAST of CSPI02G01780 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 2.7e-32
Identity = 109/298 (36.58%), Postives = 151/298 (50.67%), Query Frame = 0

Query: 1   MLLKSPSTPILNTWKPHF--KESSPETVILHQFCKSRLPTLSASSKLLPAPCMIG--GQA 60
           MLL+S S PILN+W P    +ESSPE        +S+L   S S  L  +  + G  G+ 
Sbjct: 1   MLLRSTSAPILNSWLPQHCSRESSPEP-------ESQLWRRSTSLSLFSSKSIDGHTGEQ 60

Query: 61  IKTMLSNISVV----------AKRIP-----RMAVLDEG-------------------LC 120
           +   LS+   +          + + P     R + LDE                      
Sbjct: 61  LHQALSDNKEIIILKSKSNEHSYKTPTSSRQRRSSLDETRYTKKTLDRSSPFLVERLFSS 120

Query: 121 CGVDDVGESSDCGGEMVGGFVDGKVNRDG--CNGNDNGNGGCFVSWDGDTEEDMAEMHFQ 180
            G  D   S+D    +V G   G     G  CNG   G GG  V  DG   ED  + +++
Sbjct: 121 SGQGDKASSNDRLETLVSGGGGGMGGSGGNICNGG-GGVGGSGV--DGGRSEDATDTYYR 180

Query: 181 RMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYADLIWSNYM 240
            MI +NP +SLL  NYA+FLKEV+GD+ KAEEYC RA+L   N+G+V+S+YADLI  N+ 
Sbjct: 181 EMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSLYADLILHNHQ 240

Query: 241 DASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKEVDK---GEAETDSFGGNPFSPP 256
           D  RA SY+ QA K SP++ +V A+YARFLW+V+++ +    GE E +        PP
Sbjct: 241 DRQRAHSYYKQAVKMSPEDCYVQASYARFLWDVDEDEEDEALGEEEENLSDETGHVPP 288

BLAST of CSPI02G01780 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 3.9e-31
Identity = 70/152 (46.05%), Postives = 101/152 (66.45%), Query Frame = 0

Query: 106 KVNRDGCNGNDNGNGGCFVSWDGDTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRG 165
           ++ + G NG   G GG      G       + +++ MI+  P D+LLLSNYA+FLKEV+G
Sbjct: 81  RLPQGGSNGGFGGRGGDGAGGGGGGGGGSVDGYYEEMIQRYPGDTLLLSNYARFLKEVKG 140

Query: 166 DLIKAEEYCGRAMLAR-GNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFA 225
           D  KAEEYC RAML+  G +G ++SMY DLIW N+ D  RA+SY+ QA ++SPD+  V A
Sbjct: 141 DGRKAEEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYYDQAVQSSPDDCNVLA 200

Query: 226 AYARFLWEVEKEVDKGEAE--TDSFGGNPFSP 255
           +YARFLW+ E+EV++ E++   D F  + ++P
Sbjct: 201 SYARFLWDAEEEVEEEESKHHEDGFSDSTYNP 232

BLAST of CSPI02G01780 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 6.7e-23
Identity = 64/168 (38.10%), Postives = 92/168 (54.76%), Query Frame = 0

Query: 86  DDVGES----SDCGGEMVGGF--VDGKVNRDGCNGNDNGNGGCFVSWDGDTEEDMAEM-- 145
           D+ GE     +D  G M+ G   V+ K    G  G  +G  G + +  G   ED +++  
Sbjct: 93  DEAGEEEIRFADGWGSMISGGLPVEEKCFTGGGVGGGSGYSGGYGNGGGGGYEDKSKIGD 152

Query: 146 HFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYADLIWS 205
           +++ M+++NP +SLLL NY +FL EV  D   AEEY GRA+L    +G  +SMY  LIW 
Sbjct: 153 YYREMLRSNPNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIWE 212

Query: 206 NYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKEVDKGEAETD 246
              D  RA+ Y  QA   SP++  V  +YARF+WE E + D  E E +
Sbjct: 213 TKRDEKRAQGYFDQAVNASPNDCMVLGSYARFMWEAEDDDDDDEEEEE 260

BLAST of CSPI02G01780 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.4e-15
Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 0

Query: 138 HFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYADLIWS 197
           +++ M++  P   LLL NYA+FL E +GDL  AEEY  +  +   ++G  ++ Y  L+  
Sbjct: 124 YYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVALANYGRLVMK 183

Query: 198 NYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKEVDKGEAETD 246
            + D ++A SY  +A + SPD+S V AAYA FLWE+  + D  + + D
Sbjct: 184 LHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINADDDDEDDDED 230

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LL026.3e-154100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006810 PE=4 SV=1[more]
A0A5D3BDH31.5e-10279.77Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. ... [more]
A0A5A7V5544.4e-9981.25EIN3-binding F-box protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A6J1KGA42.1e-7759.29uncharacterized protein LOC111493633 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1G2S93.8e-7459.71uncharacterized protein LOC111450271 OS=Cucurbita moschata OX=3662 GN=LOC1114502... [more]
Match NameE-valueIdentityDescription
XP_011648683.21.3e-153100.00uncharacterized protein LOC105434540 [Cucumis sativus] >KGN60686.1 hypothetical ... [more]
TYJ97822.13.0e-10279.77putative Tetratricopeptide repeat-like superfamily protein [Cucumis melo var. ma... [more]
KAA0061616.19.2e-9981.25EIN3-binding F-box protein 1 [Cucumis melo var. makuwa][more]
KAG6599396.11.2e-7961.96hypothetical protein SDJN03_09174, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023545630.13.1e-7861.15uncharacterized protein LOC111805006 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT5G20190.13.2e-3336.67Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G80130.12.7e-3236.58Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G32340.13.9e-3146.05Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G17940.16.7e-2338.10Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G04530.11.4e-1537.96Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 126..242
e-value: 1.5E-9
score: 39.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 133..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..270
NoneNo IPR availablePANTHERPTHR26312:SF73TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEINcoord: 95..262
coord: 1..46
NoneNo IPR availablePANTHERPTHR26312TETRATRICOPEPTIDE REPEAT PROTEIN 5coord: 95..262
coord: 1..46

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G01780.1CSPI02G01780.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding