CSPI02G01530 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G01530
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Location	Chr2: 1080250 .. 1082326 (-)
RNA-Seq Expression	CSPI02G01530
Synteny	CSPI02G01530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATACCGAGGCAATTGCGAACAATCTTCACCGGCGCCGCCGTCATCCTCGGCGGAATTTGCACTCTCAACTTGGCTTCTTTTCTCACTATTCAAACCCTTCGTGTTACTGCTGAAGCCAAACGGGTAATTCATTTTCCTCTTCCTCTAGGACTACATGTAGTATTTAAGAAAATTCGTAAATTCTGAACCAGTTCTTTAATACCATTCTATTGGGTTTTTCGATTTCTCTGCAGAGAAAGATTGGTTTGCCCTGTAAAGCTTGTAGAGGAAAAGGATTCTATATGTGCAAATTATGCAGAGGAAATGCTGTCATTCAGTGGTCGCCATTGTCTGATCCTATTGCCATGAACCCATGTGTGTGCCCTACTTGTGAGGGAAACAGGTTATACTTTGACCCCTTTTCATTTCCCCGGGGCTAAATTAATGGCATTTGCATTCTTTGTGATTTACTCAGTAGGTTCTCTGTTCATGTCAATTCTTATCCAGATTCTCATGTGTATTATGAAAATTATGCTGAACCCTAATGATATTTGTGTGTGTTTAGTTTGTTGAGAAAAATTTAAGAAGGAATAACTCGTCTTAAGTTGAATCAAAATTTTCGCTTTTAAAAAGTTGAGATTTTAAAGCTCTCTCTAATTTGTCCTGTATTGAAATTGACTGATAATAAACACAAAAGGGTAATTGGTAAAATTTTTCCTATTTCTGTGAAATTTTTTGGCTGGGCTGATATTCAATTGGTTTACGTTTTCTGGCGGTGATGTGTTTTCTCACTACTGTTGTTTATTTGCTGCATCATTTGATATTGCAGGGTACAACGTTGCCTAAATTGCCTAGGTAAAGGATATGAAGTATGATTGAACTATGACATTGGCAACAAGTGTGATTTAGCCTATATGTTTCTCAGAAAGTAAGTGATTTATCTTTGTGTTGAATTTGTTATTTTCGGAGTTTTCACTTGATAATAGTAATCTCTGGGATCATATAGCTTTTTGTACAATTGTATCGGCTATCGTATTAGCAAGAGCACTCTATATCTGATGCTTTTAATCATCAGTGTATGCTTAGCAATTTTGGGAGGGATTTTAGCGAGATTGCTGTTATTTATGCTTTTGTATAGTTGTATTTGGTCTTCATTTTAGCGAGAAGACTGTATAGTTTGTTGGCGAAGTTGTTTAGCATCAAAAAGTTCTCATAGTTGTTAAAGTTCATTAAGGGGTCTGAAAATGTCGAGGATTTTGTGGACAGAAATGAAACATCTAGGAGACAAGTGAACTCTGCTGCACATGGATAGAGCAACAGTGTAACTGCTACTGGACATGTTATGAGAATATGGCTGTTCTCTAAAACTATTAAAATTAGTGATCTAAATTCATTAACAATTCTATGACTTGCACGATCATTCAATCAACTATGAGTATAACACTCGTATAATCTGTAATAGATCTTAATCATTCTTTATCTAGGCTCTTGGATGGGTCTTACGTTGGCTGCCTGGTTGTTTCTCGTTCACCAGATAGCCATTAATTCAAGGCCAATGGTCAAGAAAGGCCACAGCTATGATTTTGATAAATTATTTGAAGGGAATGAGTGCAATCCATGATGACCACCTCCCTAGGATTTAATATCATATGAGTTTCCTTCAATTGCGAATGTTGTAGGGTTGGTTGACCCTCGAGATTAAGTCGAAGTGCGTGCAAGGTAGCCTCGAAACTCACAGTTATGAAAAACAAAGAAGAAAAACCGTCATGTCCTTTTCACAATTATAGCCTAGTGGTTATAACTTTTTTTTCATTTTTTATCATTATTGGGATGTTGTTGATCTGTTTGTAAGACTCTGGGAGTTAATTGATATAATTGCTGGTATGTGTTGTGGGCCTGTGGCCTTGTGGGTAACTTGTGAATGCATACAATAGGATATCTTTGTATACATTCTGATTCTTCTTTCATTCTTCTTTGGTGTTTTCAGTTCATTTTCTATCCATTGATTGGTGTTTCTTAGCTTTTGGAGTTGGCTTGTAACCTTAAAAGTCTCAGCGTGCCAAAGGATACGAGACCGTTCTGTGTCTCATCGTAG

mRNA sequence

ATGATACCGAGGCAATTGCGAACAATCTTCACCGGCGCCGCCGTCATCCTCGGCGGAATTTGCACTCTCAACTTGGCTTCTTTTCTCACTATTCAAACCCTTCGTGTTACTGCTGAAGCCAAACGGAGAAAGATTGGTTTGCCCTGTAAAGCTTGTAGAGGAAAAGGATTCTATATGTGCAAATTATGCAGAGGAAATGCTGTCATTCAGTGGTCGCCATTGTCTGATCCTATTGCCATGAACCCATGTGTGTGCCCTACTTGTGAGGGAAACAGGGTACAACGTTGCCTAAATTGCCTAGGTAAAGGATATGAACAAGAGCACTCTATATCTGATGCTTTTAATCATCAGTGTATGCTTAGCAATTTTGGGAGGGATTTTAGCGAGATTGCTGTTATTTATGCTTTTGAGACAAGTGAACTCTGCTGCACATGGATAGAGCAACAGTGTAACTGCTACTGGACATGTTATGAGAATATGGCTATCTTAATCATTCTTTATCTAGGCTCTTGGATGGGTCTTACGTTGGCTGCCTGGTTGTTTCTCGTTCACCAGATAGCCATTAATTCAAGGCCAATGGGTTGGTTGACCCTCGAGATTAAGTCGAAGTGCGTGCAAGGTAGCCTCGAAACTCACAGTTATGAAAAACAAAGAAGAAAAACCGTCATACTCTGGGAGTTAATTGATATAATTGCTGGTATGTGTTGTGGGCCTGTGGCCTTGTGGCTTTTGGAGTTGGCTTGTAACCTTAAAAGTCTCAGCGTGCCAAAGGATACGAGACCGTTCTGTGTCTCATCGTAG

Coding sequence (CDS)

ATGATACCGAGGCAATTGCGAACAATCTTCACCGGCGCCGCCGTCATCCTCGGCGGAATTTGCACTCTCAACTTGGCTTCTTTTCTCACTATTCAAACCCTTCGTGTTACTGCTGAAGCCAAACGGAGAAAGATTGGTTTGCCCTGTAAAGCTTGTAGAGGAAAAGGATTCTATATGTGCAAATTATGCAGAGGAAATGCTGTCATTCAGTGGTCGCCATTGTCTGATCCTATTGCCATGAACCCATGTGTGTGCCCTACTTGTGAGGGAAACAGGGTACAACGTTGCCTAAATTGCCTAGGTAAAGGATATGAACAAGAGCACTCTATATCTGATGCTTTTAATCATCAGTGTATGCTTAGCAATTTTGGGAGGGATTTTAGCGAGATTGCTGTTATTTATGCTTTTGAGACAAGTGAACTCTGCTGCACATGGATAGAGCAACAGTGTAACTGCTACTGGACATGTTATGAGAATATGGCTATCTTAATCATTCTTTATCTAGGCTCTTGGATGGGTCTTACGTTGGCTGCCTGGTTGTTTCTCGTTCACCAGATAGCCATTAATTCAAGGCCAATGGGTTGGTTGACCCTCGAGATTAAGTCGAAGTGCGTGCAAGGTAGCCTCGAAACTCACAGTTATGAAAAACAAAGAAGAAAAACCGTCATACTCTGGGAGTTAATTGATATAATTGCTGGTATGTGTTGTGGGCCTGTGGCCTTGTGGCTTTTGGAGTTGGCTTGTAACCTTAAAAGTCTCAGCGTGCCAAAGGATACGAGACCGTTCTGTGTCTCATCGTAG

Protein sequence

MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEQEHSISDAFNHQCMLSNFGRDFSEIAVIYAFETSELCCTWIEQQCNCYWTCYENMAILIILYLGSWMGLTLAAWLFLVHQIAINSRPMGWLTLEIKSKCVQGSLETHSYEKQRRKTVILWELIDIIAGMCCGPVALWLLELACNLKSLSVPKDTRPFCVSS*

Homology

[Close]

BLAST of CSPI02G01530 vs. ExPASy TrEMBL
Match: A0A0A0LI05 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006050 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 5.1e-55
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60
           MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC
Sbjct: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 106
           KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE
Sbjct: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 105

[Close]

BLAST of CSPI02G01530 vs. ExPASy TrEMBL
Match: A0A1S3C6K9 (uncharacterized protein LOC103497424 OS=Cucumis melo OX=3656 GN=LOC103497424 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.6e-53
Identity = 102/105 (97.14%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60
           MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLR+TAEAKRRKI LPCKACRGKGFY+C
Sbjct: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 106
           KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE
Sbjct: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 105

[Close]

BLAST of CSPI02G01530 vs. ExPASy TrEMBL
Match: A0A6J1CNQ8 (uncharacterized protein LOC111012944 OS=Momordica charantia OX=3673 GN=LOC111012944 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 2.4e-52
Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60
           MIPRQLRT+FTGAAVILGGICTLN ASFLTIQTLR+TAEAKRRKI LPCKACRGKGFY+C
Sbjct: 1   MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 106
           KLCRGNAVI WSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE
Sbjct: 61  KLCRGNAVIHWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 105

[Close]

BLAST of CSPI02G01530 vs. ExPASy TrEMBL
Match: A0A5D3BFD4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00060 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.1e-44
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1  MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60
          MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLR+TAEAKRRKI LPCKACRGKGFY+C
Sbjct: 1  MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61 KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNR 93
          KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNR
Sbjct: 61 KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNR 92

[Close]

BLAST of CSPI02G01530 vs. ExPASy TrEMBL
Match: A0A6P4BUI7 (uncharacterized protein LOC107435933 OS=Ziziphus jujuba OX=326968 GN=LOC107435933 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.8e-42
Identity = 79/105 (75.24%), Postives = 93/105 (88.57%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60
           MIP+QLRT+ TGAAVILGGI TLNL S  TI TLR+  EAKRRK+ LPC+ C+GKGFY+C
Sbjct: 1   MIPKQLRTMATGAAVILGGIFTLNLVSSATIATLRLATEAKRRKVALPCRVCKGKGFYIC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 106
           +LC+GNA IQWSPL DP+A+NPC+CPTC+GNRVQRCLNCLGKGY+
Sbjct: 61  RLCKGNATIQWSPLYDPVAINPCLCPTCDGNRVQRCLNCLGKGYD 105

[Close]

BLAST of CSPI02G01530 vs. NCBI nr
Match: XP_004139324.1 (uncharacterized protein LOC101203873 [Cucumis sativus] >KGN60659.1 hypothetical protein Csa_019507 [Cucumis sativus])

HSP 1 Score: 224.6 bits (571), Expect = 1.0e-54
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60
           MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC
Sbjct: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 106
           KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE
Sbjct: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 105

[Close]

BLAST of CSPI02G01530 vs. NCBI nr
Match: XP_008457839.1 (PREDICTED: uncharacterized protein LOC103497424 [Cucumis melo])

HSP 1 Score: 219.5 bits (558), Expect = 3.4e-53
Identity = 102/105 (97.14%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60
           MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLR+TAEAKRRKI LPCKACRGKGFY+C
Sbjct: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 106
           KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE
Sbjct: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 105

[Close]

BLAST of CSPI02G01530 vs. NCBI nr
Match: XP_022142951.1 (uncharacterized protein LOC111012944 [Momordica charantia])

HSP 1 Score: 215.7 bits (548), Expect = 4.9e-52
Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60
           MIPRQLRT+FTGAAVILGGICTLN ASFLTIQTLR+TAEAKRRKI LPCKACRGKGFY+C
Sbjct: 1   MIPRQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 106
           KLCRGNAVI WSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE
Sbjct: 61  KLCRGNAVIHWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 105

[Close]

BLAST of CSPI02G01530 vs. NCBI nr
Match: XP_038889623.1 (uncharacterized protein LOC120079492 [Benincasa hispida])

HSP 1 Score: 214.9 bits (546), Expect = 8.3e-52
Identity = 98/105 (93.33%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60
           MIP+QLRT+FTGAAVILGGICTLN ASFLTIQTLR+TAEAKRRKI LPCKACRGKGFY+C
Sbjct: 1   MIPKQLRTVFTGAAVILGGICTLNFASFLTIQTLRLTAEAKRRKIALPCKACRGKGFYIC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 106
           KLC+GNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE
Sbjct: 61  KLCQGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYE 105

[Close]

BLAST of CSPI02G01530 vs. NCBI nr
Match: KAG6586407.1 (hypothetical protein SDJN03_19140, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 206.1 bits (523), Expect = 3.9e-49
Identity = 96/110 (87.27%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 1   MIPRQLRTIFTGAAVILGGICTLNLASFLTIQTLRVTAEAKRRKIGLPCKACRGKGFYMC 60
           M+PRQLRTIFTGAAVI GGI TL  ASFLTIQTLR TAEAKRRKI LPC+ACRGKGFY+C
Sbjct: 1   MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYIC 60

Query: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEQEHSI 111
           KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQ CLNCLGKGYE+   I
Sbjct: 61  KLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCLGKGYEKSAKI 110

[Close]

BLAST of CSPI02G01530 vs. TAIR 10
Match: AT5G20220.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04
Identity = 24/66 (36.36%), Postives = 30/66 (45.45%), Query Frame = 0


Query: 47  LPCKACRGKGFYMCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEQ 106
           LPC  CRG+G+  C  C     I+ S L          CP C+G  +  CL CLG     
Sbjct: 90  LPCPTCRGRGYTSCSNCG----IERSRLD---------CPQCKGKGIMTCLRCLGDCVIW 142

Query: 107 EHSISD 113
           E SI +
Sbjct: 150 EESIDE 142

[Close]

BLAST of CSPI02G01530 vs. TAIR 10
Match: AT5G20220.2 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04
Identity = 24/66 (36.36%), Postives = 30/66 (45.45%), Query Frame = 0


Query: 47  LPCKACRGKGFYMCKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQRCLNCLGKGYEQ 106
           LPC  CRG+G+  C  C     I+ S L          CP C+G  +  CL CLG     
Sbjct: 90  LPCPTCRGRGYTSCSNCG----IERSRLD---------CPQCKGKGIMTCLRCLGDCVIW 142

Query: 107 EHSISD 113
           E SI +
Sbjct: 150 EESIDE 142

The following BLAST results are available for this feature:

BLAST of CSPI02G01530 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI02G01530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI05	5.1e-55	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006050 PE=4 SV=1	[more]
A0A1S3C6K9	1.6e-53	97.14	uncharacterized protein LOC103497424 OS=Cucumis melo OX=3656 GN=LOC103497424 PE=...	[more]
A0A6J1CNQ8	2.4e-52	94.29	uncharacterized protein LOC111012944 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A5D3BFD4	1.1e-44	96.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6P4BUI7	3.8e-42	75.24	uncharacterized protein LOC107435933 OS=Ziziphus jujuba OX=326968 GN=LOC10743593...	[more]

BLAST of CSPI02G01530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139324.1	1.0e-54	100.00	uncharacterized protein LOC101203873 [Cucumis sativus] >KGN60659.1 hypothetical ...	[more]
XP_008457839.1	3.4e-53	97.14	PREDICTED: uncharacterized protein LOC103497424 [Cucumis melo]	[more]
XP_022142951.1	4.9e-52	94.29	uncharacterized protein LOC111012944 [Momordica charantia]	[more]
XP_038889623.1	8.3e-52	93.33	uncharacterized protein LOC120079492 [Benincasa hispida]	[more]
KAG6586407.1	3.9e-49	87.27	hypothetical protein SDJN03_19140, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CSPI02G01530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20220.1	1.4e-04	36.36	zinc knuckle (CCHC-type) family protein	[more]
AT5G20220.2	1.4e-04	36.36	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 12..104
None	No IPR available	PANTHER	PTHR15852:SF63	BNAA02G17140D PROTEIN	coord: 12..104
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 46..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G01530.1	CSPI02G01530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane