CSPI02G01450 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G01450
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 1018341 .. 1018788 (+)
RNA-Seq ExpressionCSPI02G01450
SyntenyCSPI02G01450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCTTTTCATCTTTCCCATATATAAAGTACCAAAAACCACATCAAACTATAACCAAAATCTCATCAATCATAATTGACGATCCTCTCCTCTTTACTTTCTTCTGGACATCAAAACATATATCAAAAAATGGCTCCCATTTCAAGATTACCTTGTGTCTTGGGGTTGAAGAACCTTGGAGGTGATGGTGGACATGGTTATCGTGAGGGATGTGATTGTGGTTATACTACTCTTGTTTCGATGGCAGAGGAGGACAGCGACGACGACGACGATGGTGGATACGACTTTGCTCCCGCTGCTTGAGTTTTGTTTTAAGATCATCTAAAGTGACGATTAGTAAAAGTTGGAGGAAGAGAGTCGTTGAAAAGATGTGGGAATTTGAAGAGAGAATGAGCATATATATTTTGTGTGGCAGGGAAAGATTGGCAAGAGAAAGTTAGGGTTACGG

mRNA sequence

CTTTCTTTTCATCTTTCCCATATATAAAGTACCAAAAACCACATCAAACTATAACCAAAATCTCATCAATCATAATTGACGATCCTCTCCTCTTTACTTTCTTCTGGACATCAAAACATATATCAAAAAATGGCTCCCATTTCAAGATTACCTTGTGTCTTGGGGTTGAAGAACCTTGGAGGTGATGGTGGACATGGTTATCGTGAGGGATGTGATTGTGGTTATACTACTCTTGTTTCGATGGCAGAGGAGGACAGCGACGACGACGACGATGGTGGATACGACTTTGCTCCCGCTGCTTGAGTTTTGTTTTAAGATCATCTAAAGTGACGATTAGTAAAAGTTGGAGGAAGAGAGTCGTTGAAAAGATGTGGGAATTTGAAGAGAGAATGAGCATATATATTTTGTGTGGCAGGGAAAGATTGGCAAGAGAAAGTTAGGGTTACGG

Coding sequence (CDS)

ATGGCTCCCATTTCAAGATTACCTTGTGTCTTGGGGTTGAAGAACCTTGGAGGTGATGGTGGACATGGTTATCGTGAGGGATGTGATTGTGGTTATACTACTCTTGTTTCGATGGCAGAGGAGGACAGCGACGACGACGACGATGGTGGATACGACTTTGCTCCCGCTGCTTGA

Protein sequence

MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEEDSDDDDDGGYDFAPAA*
Homology
[Close]
BLAST of CSPI02G01450 vs. ExPASy TrEMBL
Match: A0A0A0LF41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005960 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.5e-23
Identity = 55/57 (96.49%), Postives = 55/57 (96.49%), Query Frame = 0 

Query: 1  MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEEDSDDDDDGGYDFAPAA 58
          MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAE DS DDDDGGYDFAPAA
Sbjct: 1  MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEGDS-DDDDGGYDFAPAA 56

[Close]
BLAST of CSPI02G01450 vs. NCBI nr
Match: KGN60650.1 (hypothetical protein Csa_019209 [Cucumis sativus])

HSP 1 Score: 117.1 bits (292), Expect = 5.1e-23
Identity = 55/57 (96.49%), Postives = 55/57 (96.49%), Query Frame = 0 

Query: 1  MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEEDSDDDDDGGYDFAPAA 58
          MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAE DS DDDDGGYDFAPAA
Sbjct: 1  MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEGDS-DDDDGGYDFAPAA 56

[Close]
BLAST of CSPI02G01450 vs. NCBI nr
Match: KAG6599418.1 (hypothetical protein SDJN03_09196, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 64.3 bits (155), Expect = 3.9e-07
Identity = 35/57 (61.40%), Postives = 38/57 (66.67%), Query Frame = 0 

Query: 1   MAPISRLPCVLGLKNLGGDGGHGYREGCDCGYTTLVSMAEEDSDDDDDGGYDFAPAA 58
           M PIS+ P    L +LG  G HGY E  DCGY   VSMA+ED DDDDD  YDFAPAA
Sbjct: 60  MVPISK-PMASWLTSLGA-GRHGYGERRDCGYIAPVSMAKEDGDDDDDDSYDFAPAA 114

The following BLAST results are available for this feature:
BLAST of CSPI02G01450 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G01450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF412.5e-2396.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005960 PE=4 SV=1[more]
BLAST of CSPI02G01450 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60650.15.1e-2396.49hypothetical protein Csa_019209 [Cucumis sativus][more]
KAG6599418.13.9e-0761.40hypothetical protein SDJN03_09196, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CSPI02G01450 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G01450.1CSPI02G01450.1mRNA