CSPI02G01350 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G01350
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Small polypeptide DEVIL 10
Location	Chr2: 917444 .. 917626 (+)
RNA-Seq Expression	CSPI02G01350
Synteny	CSPI02G01350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCTCGCATACGCCGTCGCTCACTCTTCTCAGTCAACGCAACTCCGCATCAGAAACCGCCGGAAAACCAGTTTTCGAAAGCGATGCTTCCGGATGATCAAGCAACAGAAAACCAGATTTTATATCCTCGGCCGTTGCATCTCCATGCTTCTTTGTTGGCACGATCATGATATTACTGAT

mRNA sequence

ATGTCCCTCGCATACGCCGTCGCTCACTCTTCTCAGTCAACGCAACTCCGCATCAGAAACCGCCGGAAAACCAGTTTTCGAAAGCGATGCTTCCGGATGATCAAGCAACAGAAAACCAGATTTTATATCCTCGGCCGTTGCATCTCCATGCTTCTTTGTTGGCACGATCATGATATTACTGAT

Coding sequence (CDS)

ATGTCCCTCGCATACGCCGTCGCTCACTCTTCTCAGTCAACGCAACTCCGCATCAGAAACCGCCGGAAAACCAGTTTTCGAAAGCGATGCTTCCGGATGATCAAGCAACAGAAAACCAGATTTTATATCCTCGGCCGTTGCATCTCCATGCTTCTTTGTTGGCACGATCATGATATTACTGAT

Protein sequence

MSLAYAVAHSSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDITD

Homology

[Close]

BLAST of CSPI02G01350 vs. ExPASy Swiss-Prot
Match: Q6IM91 (Small polypeptide DEVIL 10 OS=Arabidopsis thaliana OX=3702 GN=DVL10 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 5.4e-10
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 13 STQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDITD 62
          ++ L  +  RKT F  RC  M KQQ+TR YIL RC+SMLLCWHDH I+D
Sbjct: 7  NSSLPTKPNRKTRFGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSISD 55

[Close]

BLAST of CSPI02G01350 vs. ExPASy Swiss-Prot
Match: Q6IM86 (Small polypeptide DEVIL 15 OS=Arabidopsis thaliana OX=3702 GN=DVL15 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 6.2e-06
Identity = 23/49 (46.94%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 10  SSQSTQL-RIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDH 58
           SS+S+ L RI +++  S   +CF++ K+ K+RFYI+ RC+ ML+CWH H
Sbjct: 95  SSKSSSLSRILSKKGASVTGKCFKVAKEHKSRFYIIKRCVLMLVCWHKH 143

[Close]

BLAST of CSPI02G01350 vs. ExPASy Swiss-Prot
Match: Q7XXN8 (Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.8e-05
Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 25 SFRKRCFRMIKQQKTRFYILGRCISMLLCWHD--HDITD 62
          +F ++C  ++K+Q+ +FYIL RCI+ML+CWHD  HD  D
Sbjct: 14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWHDQNHDRKD 52

[Close]

BLAST of CSPI02G01350 vs. ExPASy Swiss-Prot
Match: Q6IM93 (Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.4e-05
Identity = 19/46 (41.30%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 13 STQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHD 59
          +T+   + + K  F ++C R++K+Q+ RFYI+ RC+ ML+CW DH+
Sbjct: 27 TTRSSRQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICWTDHN 72

[Close]

BLAST of CSPI02G01350 vs. ExPASy Swiss-Prot
Match: Q8S8S3 (Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 3.1e-05
Identity = 18/48 (37.50%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 10 SSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDH 58
          S+ S+    + + + +F ++C R++K+Q+ RFYI+ RC+ ML+CW D+
Sbjct: 36 STSSSSFNGKKQGRCAFTRKCARLVKEQRARFYIMRRCVIMLICWRDN 83

[Close]

BLAST of CSPI02G01350 vs. ExPASy TrEMBL
Match: A0A0A0LIV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005340 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.6e-26
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MSLAYAVAHSSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIT 60
          MSLAYAVAHSSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIT
Sbjct: 1  MSLAYAVAHSSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIT 60

Query: 61 D 62
          D
Sbjct: 61 D 61

[Close]

BLAST of CSPI02G01350 vs. ExPASy TrEMBL
Match: A0A7J6F8M0 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_006385 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.9e-12
Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 10 SSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDITD 62
          SS S+  R ++ RKT  RKRC  M+KQQKTRFYILGRC+SMLLCWHDH I+D
Sbjct: 8  SSASSGTRRKSSRKTGLRKRCLLMVKQQKTRFYILGRCVSMLLCWHDHSISD 59

[Close]

BLAST of CSPI02G01350 vs. ExPASy TrEMBL
Match: A0A2I0VUM3 (Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca012977 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-11
Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 0


Query: 1  MSLAYAVAHSSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIT 60
          M++A+ V+ SS S   R    RKT  R+RC  M+KQQKTRFYILGRC+SMLLCWH H+I+
Sbjct: 1  MAIAFDVSVSSNSRSRRPETGRKTGLRRRCATMMKQQKTRFYILGRCVSMLLCWHAHNIS 60

Query: 61 D 62
          D
Sbjct: 61 D 61

[Close]

BLAST of CSPI02G01350 vs. ExPASy TrEMBL
Match: A0A2R6R4H0 (Lipoyl synthase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc09924 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.0e-11
Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 0


Query: 8  AHSSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDITD 62
          +H  Q T  R ++RR+T FR+RC  + KQQ+ RFYI+GRC+SMLLCWHDHD++D
Sbjct: 5  SHFLQFTASRRKSRRRTGFRRRCLAVYKQQRARFYIIGRCVSMLLCWHDHDVSD 58

[Close]

BLAST of CSPI02G01350 vs. ExPASy TrEMBL
Match: A0A6J0ZR63 (uncharacterized protein LOC110411337 OS=Herrania umbratica OX=108875 GN=LOC110411337 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.9e-11
Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 10 SSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDITD 62
          S+ +T  R +  RK SFRKRC  M KQQKTRFYILGRCI+MLLCWHDH I+D
Sbjct: 9  STSNTCCRSQKLRKPSFRKRCLLMAKQQKTRFYILGRCIAMLLCWHDHSISD 60

[Close]

BLAST of CSPI02G01350 vs. NCBI nr
Match: KGN60637.1 (hypothetical protein Csa_019376 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 1.2e-25
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MSLAYAVAHSSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIT 60
          MSLAYAVAHSSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIT
Sbjct: 1  MSLAYAVAHSSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIT 60

Query: 61 D 62
          D
Sbjct: 61 D 61

[Close]

BLAST of CSPI02G01350 vs. NCBI nr
Match: KAG7030417.1 (hypothetical protein SDJN02_08764, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 94.0 bits (232), Expect = 4.9e-16
Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 1  MSLAYAVAHSSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIT 60
          M  AY+ AH+SQSTQL + NRR+TSFRKRC  MIKQQKTRFYIL RCISML+CW+D DI 
Sbjct: 29 MPSAYSAAHASQSTQLCLGNRRRTSFRKRCLLMIKQQKTRFYILARCISMLMCWNDRDIP 88

Query: 61 D 62
          D
Sbjct: 89 D 89

[Close]

BLAST of CSPI02G01350 vs. NCBI nr
Match: KAG6586417.1 (hypothetical protein SDJN03_19150, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 88.2 bits (217), Expect = 2.7e-14
Identity = 44/56 (78.57%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 6  AVAHSSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDITD 62
          + A SSQS QLR+R  RK SFRKRC RMIKQQKTRFYILGRCISMLLCW D DI D
Sbjct: 38 STALSSQSAQLRLRTCRKISFRKRCLRMIKQQKTRFYILGRCISMLLCWQDRDIHD 93

[Close]

BLAST of CSPI02G01350 vs. NCBI nr
Match: KAG2718566.1 (hypothetical protein I3760_03G226000 [Carya illinoinensis] >KAG7989032.1 hypothetical protein I3843_03G218000 [Carya illinoinensis])

HSP 1 Score: 82.0 bits (201), Expect = 1.9e-12
Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 21 RRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDITD 62
          RRKT FRKRCF M KQQKTRFYILGRCISMLLCWHDHD++D
Sbjct: 14 RRKTGFRKRCFLMAKQQKTRFYILGRCISMLLCWHDHDLSD 54

[Close]

BLAST of CSPI02G01350 vs. NCBI nr
Match: KAG6723749.1 (hypothetical protein I3842_03G223500 [Carya illinoinensis])

HSP 1 Score: 82.0 bits (201), Expect = 1.9e-12
Identity = 36/41 (87.80%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 21 RRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDITD 62
          RRKT FRKRCF M KQQKTRFYILGRCISMLLCWHDHD++D
Sbjct: 14 RRKTGFRKRCFLMAKQQKTRFYILGRCISMLLCWHDHDLSD 54

[Close]

BLAST of CSPI02G01350 vs. TAIR 10
Match: AT4G13395.1 (ROTUNDIFOLIA like 12 )

HSP 1 Score: 64.3 bits (155), Expect = 3.9e-11
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 13 STQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDITD 62
          ++ L  +  RKT F  RC  M KQQ+TR YIL RC+SMLLCWHDH I+D
Sbjct: 7  NSSLPTKPNRKTRFGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSISD 55

[Close]

BLAST of CSPI02G01350 vs. TAIR 10
Match: AT3G46613.1 (ROTUNDIFOLIA like 4 )

HSP 1 Score: 50.8 bits (120), Expect = 4.4e-07
Identity = 23/49 (46.94%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 10  SSQSTQL-RIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDH 58
           SS+S+ L RI +++  S   +CF++ K+ K+RFYI+ RC+ ML+CWH H
Sbjct: 95  SSKSSSLSRILSKKGASVTGKCFKVAKEHKSRFYIIKRCVLMLVCWHKH 143

[Close]

BLAST of CSPI02G01350 vs. TAIR 10
Match: AT2G36985.1 (DVL family protein )

HSP 1 Score: 49.3 bits (116), Expect = 1.3e-06
Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 25 SFRKRCFRMIKQQKTRFYILGRCISMLLCWHD--HDITD 62
          +F ++C  ++K+Q+ +FYIL RCI+ML+CWHD  HD  D
Sbjct: 14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWHDQNHDRKD 52

[Close]

BLAST of CSPI02G01350 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 )

HSP 1 Score: 48.9 bits (115), Expect = 1.7e-06
Identity = 19/46 (41.30%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 13 STQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHD 59
          +T+   + + K  F ++C R++K+Q+ RFYI+ RC+ ML+CW DH+
Sbjct: 27 TTRSSRQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICWTDHN 72

[Close]

BLAST of CSPI02G01350 vs. TAIR 10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8 )

HSP 1 Score: 48.5 bits (114), Expect = 2.2e-06
Identity = 18/48 (37.50%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 10 SSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDH 58
          S+ S+    + + + +F ++C R++K+Q+ RFYI+ RC+ ML+CW D+
Sbjct: 36 STSSSSFNGKKQGRCAFTRKCARLVKEQRARFYIMRRCVIMLICWRDN 83

The following BLAST results are available for this feature:

BLAST of CSPI02G01350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6IM91	5.4e-10	59.18	Small polypeptide DEVIL 10 OS=Arabidopsis thaliana OX=3702 GN=DVL10 PE=3 SV=1	[more]
Q6IM86	6.2e-06	46.94	Small polypeptide DEVIL 15 OS=Arabidopsis thaliana OX=3702 GN=DVL15 PE=2 SV=1	[more]
Q7XXN8	1.8e-05	51.28	Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1	[more]
Q6IM93	2.4e-05	41.30	Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1	[more]
Q8S8S3	3.1e-05	37.50	Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1	[more]

BLAST of CSPI02G01350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIV1	5.6e-26	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005340 PE=4 SV=1	[more]
A0A7J6F8M0	7.9e-12	69.23	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_006385 PE=4 SV=1	[more]
A0A2I0VUM3	1.3e-11	60.66	Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca012977 PE=4...	[more]
A0A2R6R4H0	3.0e-11	59.26	Lipoyl synthase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc099...	[more]
A0A6J0ZR63	3.9e-11	69.23	uncharacterized protein LOC110411337 OS=Herrania umbratica OX=108875 GN=LOC11041...	[more]

BLAST of CSPI02G01350 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60637.1	1.2e-25	100.00	hypothetical protein Csa_019376 [Cucumis sativus]	[more]
KAG7030417.1	4.9e-16	73.77	hypothetical protein SDJN02_08764, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6586417.1	2.7e-14	78.57	hypothetical protein SDJN03_19150, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG2718566.1	1.9e-12	87.80	hypothetical protein I3760_03G226000 [Carya illinoinensis] >KAG7989032.1 hypothe...	[more]
KAG6723749.1	1.9e-12	87.80	hypothetical protein I3842_03G223500 [Carya illinoinensis]	[more]

BLAST of CSPI02G01350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13395.1	3.9e-11	59.18	ROTUNDIFOLIA like 12	[more]
AT3G46613.1	4.4e-07	46.94	ROTUNDIFOLIA like 4	[more]
AT2G36985.1	1.3e-06	51.28	DVL family protein	[more]
AT3G55515.1	1.7e-06	41.30	ROTUNDIFOLIA like 7	[more]
AT2G39705.1	2.2e-06	37.50	ROTUNDIFOLIA like 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012552	DVL	PFAM	PF08137	DVL	coord: 35..53 e-value: 1.1E-11 score: 44.2
None	No IPR available	PANTHER	PTHR33102:SF57	DVL10	coord: 2..60
None	No IPR available	PANTHER	PTHR33102	DVL19-RELATED-RELATED	coord: 2..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G01350.1	CSPI02G01350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008285	negative regulation of cell population proliferation
biological_process	GO:0048367	shoot system development
cellular_component	GO:0005886	plasma membrane