CSPI02G00210 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G00210
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Elf4 domain-containing protein
Location	Chr2: 150654 .. 150956 (+)
RNA-Seq Expression	CSPI02G00210
Synteny	CSPI02G00210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTGCAGAGATTTCAAAAGAATTTCGTTCAAGTACAGAACATTTTGGAGCAAAACAGAATGTTGATCAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAATGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATGCTGATCTCTCCACTTCCTTCACCAAATCCATCGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCATAG

mRNA sequence

ATGGAGGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTGCAGAGATTTCAAAAGAATTTCGTTCAAGTACAGAACATTTTGGAGCAAAACAGAATGTTGATCAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAATGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATGCTGATCTCTCCACTTCCTTCACCAAATCCATCGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCATAG

Coding sequence (CDS)

ATGGAGGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTGCAGAGATTTCAAAAGAATTTCGTTCAAGTACAGAACATTTTGGAGCAAAACAGAATGTTGATCAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAATGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATGCTGATCTCTCCACTTCCTTCACCAAATCCATCGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCATAG

Protein sequence

MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP*

Homology

[Close]

BLAST of CSPI02G00210 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.1e-26
Identity = 64/108 (59.26%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 1   MEGETLSR-----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRN 60
           MEG+T+SR      ++DGK++Q F+K+FVQVQNIL+ NR+LINEINQN ES++  N+ RN
Sbjct: 1   MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 61  VGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAAKPGYKRNRP 101
           VGLIRELNNN+RRV  LY DLS +F+KS+E    GDS+   G +R RP
Sbjct: 61  VGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDSSEGRGNRRIRP 108

[Close]

BLAST of CSPI02G00210 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.4e-23
Identity = 57/98 (58.16%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 1  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
          MEG+ LS    R  +DGK++Q FQK+FV VQ+IL+QNR+LINEINQN ES+   N+ RNV
Sbjct: 1  MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61 GLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG 95
          GLI+ELNNNIRRV  LY DLS SF +S++        G
Sbjct: 61 GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSG 98

[Close]

BLAST of CSPI02G00210 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.2e-23
Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 1   MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
           MEG+  S    R ++DGK++Q FQK+FVQVQ+IL+QNR+LINEINQN ES+ A ++ RNV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG 95
           GLIRELNNNIR V  LY DLS SF +S++        G
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTG 102

[Close]

BLAST of CSPI02G00210 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 7.1e-15
Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 4   ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELN 63
           E   +GE D  M +   +NF QVQ++L++NR LI ++N N +SRMA N+S+NV LI+ELN
Sbjct: 15  EEAEQGE-DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELN 74

Query: 64  NNIRRVVDLYADLSTSFTKSIEHGDSAAKPG 95
            NI +VV++Y+DL+TSF+     G +    G
Sbjct: 75  GNISKVVNMYSDLNTSFSSGFHGGKNGHDGG 104

[Close]

BLAST of CSPI02G00210 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-10
Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 12  DGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVD 71
           D ++       F + Q  L+QNR LI  +N+N  SR+  NVSRNVGLI E+N NI +V++
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 72  LYADLSTSFTKSIEHGDSAAKPG 95
           +Y+DLS +F K  +      K G
Sbjct: 94  IYSDLSLNFAKKFDQRRRTTKDG 116

[Close]

BLAST of CSPI02G00210 vs. ExPASy TrEMBL
Match: A0A0A0LIL2 (Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000210 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.1e-45
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60
           MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR
Sbjct: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60

Query: 61  ELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP 101
           ELNNNIRRVVDLYADLSTSFTKS EHGDSAAKPGYKRNRP
Sbjct: 61  ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 100

[Close]

BLAST of CSPI02G00210 vs. ExPASy TrEMBL
Match: A0A5D3CFW0 (Protein ELF4-LIKE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001190 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.4e-44
Identity = 96/100 (96.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60
           M+GETLSRGEIDGKMVQRFQ NFVQVQNILEQNRMLINEINQNQESRMAG VSRNVGLIR
Sbjct: 1   MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIR 60

Query: 61  ELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP 101
           ELNNNIRRVVDLYADLSTSFT SIEHGDSAAKPGYKRNRP
Sbjct: 61  ELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP 100

[Close]

BLAST of CSPI02G00210 vs. ExPASy TrEMBL
Match: A0A6J1KJ14 (protein ELF4-LIKE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493668 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 7.8e-33
Identity = 81/109 (74.31%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 1   MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSR 60
           MEGETLS G      ++DGKM Q FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++R
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 61  NVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAAKPGYKRNRP 101
           NVGLIRELNNNIRRVVDLYA LS SFTKS+E    G+SAAKPG+KRNRP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRP 109

[Close]

BLAST of CSPI02G00210 vs. ExPASy TrEMBL
Match: A0A6J1G4K6 (protein ELF4-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450723 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 7.8e-33
Identity = 81/109 (74.31%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 1   MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSR 60
           MEGETLS G      ++DGKM Q FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++R
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 61  NVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAAKPGYKRNRP 101
           NVGLIRELNNNIRRVVDLYA LS SFTKS+E    G+SAAKPG+KRNRP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRP 109

[Close]

BLAST of CSPI02G00210 vs. ExPASy TrEMBL
Match: A0A1U7WX74 (protein ELF4-LIKE 3-like OS=Nicotiana sylvestris OX=4096 GN=LOC104232936 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.6e-31
Identity = 75/104 (72.12%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 1   MEGETLSR----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
           MEG+TLS      +IDGK+VQ FQKNFVQVQNIL+QNR+LINEINQNQES++  N+SRNV
Sbjct: 1   MEGDTLSGLGNVTQIDGKVVQTFQKNFVQVQNILDQNRLLINEINQNQESKIPDNLSRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP 101
           GLIRELNNNIRRVVDLYADLSTSFTKS+++       G+KR+RP
Sbjct: 61  GLIRELNNNIRRVVDLYADLSTSFTKSVDNSSEGDSSGHKRSRP 104

[Close]

BLAST of CSPI02G00210 vs. NCBI nr
Match: KGN60512.1 (hypothetical protein Csa_019281 [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 2.2e-45
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60
           MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR
Sbjct: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60

Query: 61  ELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP 101
           ELNNNIRRVVDLYADLSTSFTKS EHGDSAAKPGYKRNRP
Sbjct: 61  ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 100

[Close]

BLAST of CSPI02G00210 vs. NCBI nr
Match: KAA0061471.1 (protein ELF4-LIKE 3-like [Cucumis melo var. makuwa] >TYK10803.1 protein ELF4-LIKE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 187.2 bits (474), Expect = 7.0e-44
Identity = 96/100 (96.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60
           M+GETLSRGEIDGKMVQRFQ NFVQVQNILEQNRMLINEINQNQESRMAG VSRNVGLIR
Sbjct: 1   MDGETLSRGEIDGKMVQRFQTNFVQVQNILEQNRMLINEINQNQESRMAGKVSRNVGLIR 60

Query: 61  ELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP 101
           ELNNNIRRVVDLYADLSTSFT SIEHGDSAAKPGYKRNRP
Sbjct: 61  ELNNNIRRVVDLYADLSTSFTNSIEHGDSAAKPGYKRNRP 100

[Close]

BLAST of CSPI02G00210 vs. NCBI nr
Match: XP_038890489.1 (protein ELF4-LIKE 3-like [Benincasa hispida])

HSP 1 Score: 160.2 bits (404), Expect = 9.2e-36
Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 1   MEGETLSRG-------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVS 60
           MEGETLS G       E+DGKMVQ FQKNFVQV+NIL+QNR+LINEINQN ES+M  N++
Sbjct: 1   MEGETLSSGGIGKGIREMDGKMVQTFQKNFVQVENILDQNRLLINEINQNHESKMPHNLT 60

Query: 61  RNVGLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPGYKRNRP 101
           RNVGLIRELNNNIRRVVDLYADLSTSFTKSI+ GDSA KPG+KRNRP
Sbjct: 61  RNVGLIRELNNNIRRVVDLYADLSTSFTKSIDDGDSAVKPGHKRNRP 107

[Close]

BLAST of CSPI02G00210 vs. NCBI nr
Match: XP_022946747.1 (protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022946748.1 protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022999232.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999233.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999234.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >XP_022999235.1 protein ELF4-LIKE 3-like [Cucurbita maxima] >KAG7030507.1 Protein ELF4-LIKE 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-32
Identity = 81/109 (74.31%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 1   MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSR 60
           MEGETLS G      ++DGKM Q FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++R
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 61  NVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAAKPGYKRNRP 101
           NVGLIRELNNNIRRVVDLYA LS SFTKS+E    G+SAAKPG+KRNRP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRP 109

[Close]

BLAST of CSPI02G00210 vs. NCBI nr
Match: XP_023521403.1 (protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023521404.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023546933.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023546934.1 protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147.5 bits (371), Expect = 6.1e-32
Identity = 80/109 (73.39%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 1   MEGETLSRG------EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSR 60
           MEGETLS G      ++DGKM   FQKNFVQVQNIL+QNR+LINEINQN ES+M  N++R
Sbjct: 1   MEGETLSSGGMGNGRQMDGKMAHTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLAR 60

Query: 61  NVGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAAKPGYKRNRP 101
           NVGLIRELNNNIRRVVDLYA LS SFTKS+E    G+SAAKPG+KRNRP
Sbjct: 61  NVGLIRELNNNIRRVVDLYAHLSASFTKSMEASSEGNSAAKPGHKRNRP 109

[Close]

BLAST of CSPI02G00210 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 )

HSP 1 Score: 119.0 bits (297), Expect = 2.2e-27
Identity = 64/108 (59.26%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 1   MEGETLSR-----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRN 60
           MEG+T+SR      ++DGK++Q F+K+FVQVQNIL+ NR+LINEINQN ES++  N+ RN
Sbjct: 1   MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 61  VGLIRELNNNIRRVVDLYADLSTSFTKSIE---HGDSAAKPGYKRNRP 101
           VGLIRELNNN+RRV  LY DLS +F+KS+E    GDS+   G +R RP
Sbjct: 61  VGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDSSEGRGNRRIRP 108

[Close]

BLAST of CSPI02G00210 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 )

HSP 1 Score: 109.4 bits (272), Expect = 1.7e-24
Identity = 57/98 (58.16%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 1  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
          MEG+ LS    R  +DGK++Q FQK+FV VQ+IL+QNR+LINEINQN ES+   N+ RNV
Sbjct: 1  MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61 GLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG 95
          GLI+ELNNNIRRV  LY DLS SF +S++        G
Sbjct: 61 GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSG 98

[Close]

BLAST of CSPI02G00210 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 )

HSP 1 Score: 109.4 bits (272), Expect = 1.7e-24
Identity = 57/98 (58.16%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 1  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
          MEG+ LS    R  +DGK++Q FQK+FV VQ+IL+QNR+LINEINQN ES+   N+ RNV
Sbjct: 1  MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61 GLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG 95
          GLI+ELNNNIRRV  LY DLS SF +S++        G
Sbjct: 61 GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSG 98

[Close]

BLAST of CSPI02G00210 vs. TAIR 10
Match: AT1G72630.1 (ELF4-like 2 )

HSP 1 Score: 109.0 bits (271), Expect = 2.3e-24
Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 1   MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
           MEG+  S    R ++DGK++Q FQK+FVQVQ+IL+QNR+LINEINQN ES+ A ++ RNV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTKSIEHGDSAAKPG 95
           GLIRELNNNIR V  LY DLS SF +S++        G
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTG 102

[Close]

BLAST of CSPI02G00210 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) )

HSP 1 Score: 81.3 bits (199), Expect = 5.0e-16
Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 4   ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELN 63
           E   +GE D  M +   +NF QVQ++L++NR LI ++N N +SRMA N+S+NV LI+ELN
Sbjct: 15  EEAEQGE-DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELN 74

Query: 64  NNIRRVVDLYADLSTSFTKSIEHGDSAAKPG 95
            NI +VV++Y+DL+TSF+     G +    G
Sbjct: 75  GNISKVVNMYSDLNTSFSSGFHGGKNGHDGG 104

The following BLAST results are available for this feature:

BLAST of CSPI02G00210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8F5	3.1e-26	59.26	Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1	[more]
Q570U6	2.4e-23	58.16	Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1	[more]
Q94BS8	3.2e-23	58.16	Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1	[more]
O04211	7.1e-15	46.15	Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1	[more]
O80877	1.8e-10	42.17	Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1	[more]

BLAST of CSPI02G00210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIL2	1.1e-45	99.00	Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000210 PE=3 S...	[more]
A0A5D3CFW0	3.4e-44	96.00	Protein ELF4-LIKE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1KJ14	7.8e-33	74.31	protein ELF4-LIKE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493668 PE=3 SV=1	[more]
A0A6J1G4K6	7.8e-33	74.31	protein ELF4-LIKE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450723 PE=3 SV=1	[more]
A0A1U7WX74	5.6e-31	72.12	protein ELF4-LIKE 3-like OS=Nicotiana sylvestris OX=4096 GN=LOC104232936 PE=3 SV...	[more]

BLAST of CSPI02G00210 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60512.1	2.2e-45	99.00	hypothetical protein Csa_019281 [Cucumis sativus]	[more]
KAA0061471.1	7.0e-44	96.00	protein ELF4-LIKE 3-like [Cucumis melo var. makuwa] >TYK10803.1 protein ELF4-LIK...	[more]
XP_038890489.1	9.2e-36	78.50	protein ELF4-LIKE 3-like [Benincasa hispida]	[more]
XP_022946747.1	1.6e-32	74.31	protein ELF4-LIKE 3-like [Cucurbita moschata] >XP_022946748.1 protein ELF4-LIKE ...	[more]
XP_023521403.1	6.1e-32	73.39	protein ELF4-LIKE 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023521404.1...	[more]

BLAST of CSPI02G00210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G06255.1	2.2e-27	59.26	ELF4-like 3	[more]
AT1G17455.1	1.7e-24	58.16	ELF4-like 4	[more]
AT1G17455.2	1.7e-24	58.16	ELF4-like 4	[more]
AT1G72630.1	2.3e-24	58.16	ELF4-like 2	[more]
AT2G40080.1	5.0e-16	46.15	Protein of unknown function (DUF1313)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009741	Protein EARLY FLOWERING 4 domain	PFAM	PF07011	Elf4	coord: 11..89 e-value: 7.4E-37 score: 125.1
IPR040462	Protein EARLY FLOWERING 4	PANTHER	PTHR33469	PROTEIN ELF4-LIKE 4	coord: 1..100
None	No IPR available	PANTHER	PTHR33469:SF17	PROTEIN ELF4-LIKE 3-LIKE	coord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G00210.1	CSPI02G00210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009649	entrainment of circadian clock
biological_process	GO:0042753	positive regulation of circadian rhythm
cellular_component	GO:0005634	nucleus