CSPI01G32810 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G32810
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	SAP domain-containing protein
Location	Chr1: 27625543 .. 27627046 (+)
RNA-Seq Expression	CSPI01G32810
Synteny	CSPI01G32810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAAATTCCTGCTCTCTCACGCTCATCTTCTCACACTTCCCTCCAATCACCGTTCCTTTTCTCTCAACCATGGCCTCCTCCCCATACGCTCAGTCCTCTCTGCTCCGGACAAGCGAGGTAGAAAGAAGCGGCAGTCTCGCCACCAACAACAATTGCAACCAAAGGACAATGATTCCACTTCACTTGAGAACTCCCTCCGCTTCACTTTCATGGAGGAACTCATGGACCGCGCTAGAAACCACGATCCACTTGGTGTTTCTGATGTCATTTACGATATGGTTGCTGCTGGATTGAGCCCTGGACCTCGCTCCTTCCATGGATTAGTTGTTTCTCATACTCTCAATGGCGATACTGAGGGAGCGGTGAGAACTCACAACCTCTCTCTCTCTCTCTCTAATTCTGTGTTTGTTTGTAAATTTGTTCTTAATGTTGTTCTTGGTTTTGGTGTGTTTTTAGGCAATGTAGTGGAATTGTATACGTGCAATTGAAGGTCTAGTGCTTAAACTTATTCCCTATTCCTTCCTTTTTCGTTATTGGATGTTTTGAAGTATAGGATCTTTAACCCTTGTTTTCTCTTTCCCGTTTGAAAAACTTAGCTTATCGGTGTCTTAATTCGATGATGAAGTTTTCTCCTCTAATATGTCCTTTGCATGCTCACCTGGTTAACAGAAGGCAGGGAAATGTATAACGTTGACTGTATTGAGGTCTCTGGTCTATTTGTCTATATGCGTGTGGGTGTCTATTCTTTTATTGAATCAGGTGTATCTGTACTCTTACTCCATCCATTGTCATGTAGACGTGTGGGATACATTTTTTTCCCTAACAAAGTAAAACTTGTTTTGGTCCCATTGTAATTTTTGTTTACAAATTCTCAGATAGATATGTATTTTTCTAAATCTTATGGGTATGCTGACTGCAGATGCAGTCTCTGAGAAGGGAATTAAGTGCTGGACTTCTTCCTCTCCATGAAACGTTTGTTGCATTAGTTCGGTTATTTGGTTCCAAGGGTCTTGCTAATAGAGGCTTAGAAATCCTTGCCGCCATGGAGAAATTGAATTATGACATCCGTCAAGCATGGCTCATTCTTACTGGTAATAGCCTGAACTTCCACTTGAGAATGCTCCTAATAGATACTTTTTAGTTATGTTTATATTTATGTCTTAGTTGCATGAATTATTTTGACTAGAGGAACTCGTAAGGAGCAAATATTTAGAAGACGCCAATAAAGTGTTCTTAAAAGGTGCCAAAGCGGGTCTCAGAGCCACTGACAAAATTTATGATCTTATGATTGAGGAAGATTGTAAAGCTGGAGATCATTCAAATGCCTTAGAGATCTCATATGAAATGGAGGCTGCTGGGCGGATGGCAACGACCTTCCATTTTAATTGCCTTCTTAGTGTCCAGGTGATGTTTCTTACTATTGGATCATTTAATGCACGTCTTTACAAATACAGGTTCAGTGATTTGAGGCTTATATTTTTAATTAAGCAAGGTAGAAAG

mRNA sequence

ATGTCCAAATTCCTGCTCTCTCACGCTCATCTTCTCACACTTCCCTCCAATCACCGTTCCTTTTCTCTCAACCATGGCCTCCTCCCCATACGCTCAGTCCTCTCTGCTCCGGACAAGCGAGGTAGAAAGAAGCGGCAGTCTCGCCACCAACAACAATTGCAACCAAAGGACAATGATTCCACTTCACTTGAGAACTCCCTCCGCTTCACTTTCATGGAGGAACTCATGGACCGCGCTAGAAACCACGATCCACTTGGTGTTTCTGATGTCATTTACGATATGGTTGCTGCTGGATTGAGCCCTGGACCTCGCTCCTTCCATGGATTAGTTGTTTCTCATACTCTCAATGGCGATACTGAGGGAGCGATGCAGTCTCTGAGAAGGGAATTAAGTGCTGGACTTCTTCCTCTCCATGAAACGTTTGTTGCATTAGTTCGGTTATTTGGTTCCAAGGGTCTTGCTAATAGAGGCTTAGAAATCCTTGCCGCCATGGAGAAATTGAATTATGACATCCGTCAAGCATGGCTCATTCTTACTGAGGAACTCGTAAGGAGCAAATATTTAGAAGACGCCAATAAAGTGTTCTTAAAAGGTGCCAAAGCGGGTCTCAGAGCCACTGACAAAATTTATGATCTTATGATTGAGGAAGATTGTAAAGCTGGAGATCATTCAAATGCCTTAGAGATCTCATATGAAATGGAGGCTGCTGGGCGGATGGCAACGACCTTCCATTTTAATTGCCTTCTTAGTGTCCAGGTGATGTTTCTTACTATTGGATCATTTAATGCACGTCTTTACAAATACAGGTTCAGTGATTTGAGGCTTATATTTTTAATTAAGCAAGGTAGAAAG

Coding sequence (CDS)

ATGTCCAAATTCCTGCTCTCTCACGCTCATCTTCTCACACTTCCCTCCAATCACCGTTCCTTTTCTCTCAACCATGGCCTCCTCCCCATACGCTCAGTCCTCTCTGCTCCGGACAAGCGAGGTAGAAAGAAGCGGCAGTCTCGCCACCAACAACAATTGCAACCAAAGGACAATGATTCCACTTCACTTGAGAACTCCCTCCGCTTCACTTTCATGGAGGAACTCATGGACCGCGCTAGAAACCACGATCCACTTGGTGTTTCTGATGTCATTTACGATATGGTTGCTGCTGGATTGAGCCCTGGACCTCGCTCCTTCCATGGATTAGTTGTTTCTCATACTCTCAATGGCGATACTGAGGGAGCGATGCAGTCTCTGAGAAGGGAATTAAGTGCTGGACTTCTTCCTCTCCATGAAACGTTTGTTGCATTAGTTCGGTTATTTGGTTCCAAGGGTCTTGCTAATAGAGGCTTAGAAATCCTTGCCGCCATGGAGAAATTGAATTATGACATCCGTCAAGCATGGCTCATTCTTACTGAGGAACTCGTAAGGAGCAAATATTTAGAAGACGCCAATAAAGTGTTCTTAAAAGGTGCCAAAGCGGGTCTCAGAGCCACTGACAAAATTTATGATCTTATGATTGAGGAAGATTGTAAAGCTGGAGATCATTCAAATGCCTTAGAGATCTCATATGAAATGGAGGCTGCTGGGCGGATGGCAACGACCTTCCATTTTAATTGCCTTCTTAGTGTCCAGGTGATGTTTCTTACTATTGGATCATTTAATGCACGTCTTTACAAATACAGGTTCAGTGATTTGAGGCTTATATTTTTAATTAAGCAAGGTAGAAAG

Protein sequence

MSKFLLSHAHLLTLPSNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQPKDNDSTSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTEGAMQSLRRELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQAWLILTEELVRSKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLSVQVMFLTIGSFNARLYKYRFSDLRLIFLIKQGRK

Homology

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BLAST of CSPI01G32810 vs. ExPASy Swiss-Prot
Match: O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.4e-04
Identity = 35/122 (28.69%), Postives = 58/122 (47.54%), Query Frame = 0


Query: 131 SAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQ-AWLILTEELVRSKYLE 190
           S G  P   T+ AL+++FG  G+    L +L  ME+ +       +  L    VR+ + +
Sbjct: 309 SCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSK 368

Query: 191 DANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLL 250
           +A  V     K G+      Y  +I+   KAG    AL++ Y M+ AG +  T  +N +L
Sbjct: 369 EAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL 428

Query: 251 SV 252
           S+
Sbjct: 429 SL 430

[Close]

BLAST of CSPI01G32810 vs. ExPASy TrEMBL
Match: A0A5A7T4U0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00670 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 2.1e-131
Identity = 244/252 (96.83%), Postives = 248/252 (98.41%), Query Frame = 0


Query: 1   MSKFLLSHAHLLTLPSNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQPKDNDS 60
           MSK LLSHAHLLTLP NHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQ KD+DS
Sbjct: 1   MSKLLLSHAHLLTLPYNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQLKDDDS 60

Query: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE
Sbjct: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120

Query: 121 GAMQSLRRELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLRRELS+GL PLHETFVALVRLFGSKGLANRGLEILAAME+LNYDIRQAWLILTE
Sbjct: 121 GAMQSLRRELSSGLRPLHETFVALVRLFGSKGLANRGLEILAAMERLNYDIRQAWLILTE 180

Query: 181 ELVRSKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240
           ELVR+KYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVRNKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 253
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 252

[Close]

BLAST of CSPI01G32810 vs. ExPASy TrEMBL
Match: A0A1S3B8T6 (uncharacterized protein LOC103487261 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487261 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 2.1e-131
Identity = 244/252 (96.83%), Postives = 248/252 (98.41%), Query Frame = 0


Query: 1   MSKFLLSHAHLLTLPSNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQPKDNDS 60
           MSK LLSHAHLLTLP NHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQ KD+DS
Sbjct: 1   MSKLLLSHAHLLTLPYNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQLKDDDS 60

Query: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE
Sbjct: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120

Query: 121 GAMQSLRRELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLRRELS+GL PLHETFVALVRLFGSKGLANRGLEILAAME+LNYDIRQAWLILTE
Sbjct: 121 GAMQSLRRELSSGLRPLHETFVALVRLFGSKGLANRGLEILAAMERLNYDIRQAWLILTE 180

Query: 181 ELVRSKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240
           ELVR+KYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVRNKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 253
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 252

[Close]

BLAST of CSPI01G32810 vs. ExPASy TrEMBL
Match: A0A1S3B9H7 (uncharacterized protein LOC103487261 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487261 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 2.1e-131
Identity = 244/252 (96.83%), Postives = 248/252 (98.41%), Query Frame = 0


Query: 1   MSKFLLSHAHLLTLPSNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQPKDNDS 60
           MSK LLSHAHLLTLP NHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQ KD+DS
Sbjct: 1   MSKLLLSHAHLLTLPYNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQLKDDDS 60

Query: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE
Sbjct: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120

Query: 121 GAMQSLRRELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLRRELS+GL PLHETFVALVRLFGSKGLANRGLEILAAME+LNYDIRQAWLILTE
Sbjct: 121 GAMQSLRRELSSGLRPLHETFVALVRLFGSKGLANRGLEILAAMERLNYDIRQAWLILTE 180

Query: 181 ELVRSKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240
           ELVR+KYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVRNKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 253
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 252

[Close]

BLAST of CSPI01G32810 vs. ExPASy TrEMBL
Match: A0A6J1EQ88 (uncharacterized protein LOC111436825 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436825 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.3e-114
Identity = 221/253 (87.35%), Postives = 233/253 (92.09%), Query Frame = 0


Query: 1   MSKFLLSHAHLLTLPSNHRSFSLNHGLL-PIRSVLSAPDKRGRKKRQSRHQQQLQPKDND 60
           MSKFLLSH++LLTLP  H SFSL++G+  PIRSVLS  +KRGRKKRQSR QQQLQ KD+D
Sbjct: 1   MSKFLLSHSYLLTLPHKHHSFSLHNGVFPPIRSVLST-EKRGRKKRQSR-QQQLQQKDDD 60

Query: 61  STSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDT 120
           ST  E SLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSH LN D 
Sbjct: 61  STVFEKSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHVLNADA 120

Query: 121 EGAMQSLRRELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQAWLILT 180
           EGAMQSLR+ELS GL PLHETFVALVRLFG+KGLA RGLEILAAMEKLNYDIRQAWLIL 
Sbjct: 121 EGAMQSLRKELSTGLRPLHETFVALVRLFGNKGLATRGLEILAAMEKLNYDIRQAWLILI 180

Query: 181 EELVRSKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRM 240
           EELV++KYLEDANKVFLKGAK GLRATDKIYDL+IEEDCKAGDHSNALEISYEMEAAGRM
Sbjct: 181 EELVKNKYLEDANKVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRM 240

Query: 241 ATTFHFNCLLSVQ 253
           ATTFHFNCLLSVQ
Sbjct: 241 ATTFHFNCLLSVQ 251

[Close]

BLAST of CSPI01G32810 vs. ExPASy TrEMBL
Match: A0A6J1L2D9 (uncharacterized protein LOC111499221 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499221 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.1e-113
Identity = 222/253 (87.75%), Postives = 232/253 (91.70%), Query Frame = 0


Query: 1   MSKFLLSHAHLLTLPSNHRSFSLNHGLL-PIRSVLSAPDKRGRKKRQSRHQQQLQPKDND 60
           MSKFLLSH+ LLTLP  H SFSL++ +L PIRSVLS  +KRGRKKRQSR QQQLQ KD D
Sbjct: 1   MSKFLLSHSCLLTLPHKHHSFSLHNAVLPPIRSVLST-EKRGRKKRQSR-QQQLQQKDYD 60

Query: 61  STSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDT 120
           ST LE SLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSH LN D 
Sbjct: 61  STVLEKSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHVLNADA 120

Query: 121 EGAMQSLRRELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQAWLILT 180
           EGAMQSLR+ELS GL PLHETFVALVRLFG+KGLA RGLEILAAMEKLNYDIRQAWLIL 
Sbjct: 121 EGAMQSLRKELSTGLRPLHETFVALVRLFGNKGLATRGLEILAAMEKLNYDIRQAWLILI 180

Query: 181 EELVRSKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRM 240
           EELV++KYLEDANKVFLKGAK GLRATDKIYDL+IEEDCKAGDHSNALEISYEMEAAGRM
Sbjct: 181 EELVKNKYLEDANKVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRM 240

Query: 241 ATTFHFNCLLSVQ 253
           ATTFHFNCLLSVQ
Sbjct: 241 ATTFHFNCLLSVQ 251

[Close]

BLAST of CSPI01G32810 vs. NCBI nr
Match: XP_011660243.1 (uncharacterized protein LOC101209618 isoform X1 [Cucumis sativus] >KAE8653592.1 hypothetical protein Csa_007695 [Cucumis sativus])

HSP 1 Score: 494.6 bits (1272), Expect = 5.8e-136
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0


Query: 1   MSKFLLSHAHLLTLPSNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQPKDNDS 60
           MSKFLLSHAHLLTLPSNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQPKDNDS
Sbjct: 1   MSKFLLSHAHLLTLPSNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQPKDNDS 60

Query: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE
Sbjct: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120

Query: 121 GAMQSLRRELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLRRELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQAWLILTE
Sbjct: 121 GAMQSLRRELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQAWLILTE 180

Query: 181 ELVRSKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240
           ELVRSKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVRSKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 253
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 252

[Close]

BLAST of CSPI01G32810 vs. NCBI nr
Match: KAA0038380.1 (Pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ97014.1 Pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 478.4 bits (1230), Expect = 4.3e-131
Identity = 244/252 (96.83%), Postives = 248/252 (98.41%), Query Frame = 0


Query: 1   MSKFLLSHAHLLTLPSNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQPKDNDS 60
           MSK LLSHAHLLTLP NHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQ KD+DS
Sbjct: 1   MSKLLLSHAHLLTLPYNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQLKDDDS 60

Query: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE
Sbjct: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120

Query: 121 GAMQSLRRELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLRRELS+GL PLHETFVALVRLFGSKGLANRGLEILAAME+LNYDIRQAWLILTE
Sbjct: 121 GAMQSLRRELSSGLRPLHETFVALVRLFGSKGLANRGLEILAAMERLNYDIRQAWLILTE 180

Query: 181 ELVRSKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240
           ELVR+KYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVRNKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 253
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 252

[Close]

BLAST of CSPI01G32810 vs. NCBI nr
Match: XP_008443747.1 (PREDICTED: uncharacterized protein LOC103487261 isoform X2 [Cucumis melo])

HSP 1 Score: 478.4 bits (1230), Expect = 4.3e-131
Identity = 244/252 (96.83%), Postives = 248/252 (98.41%), Query Frame = 0


Query: 1   MSKFLLSHAHLLTLPSNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQPKDNDS 60
           MSK LLSHAHLLTLP NHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQ KD+DS
Sbjct: 1   MSKLLLSHAHLLTLPYNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQLKDDDS 60

Query: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE
Sbjct: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120

Query: 121 GAMQSLRRELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLRRELS+GL PLHETFVALVRLFGSKGLANRGLEILAAME+LNYDIRQAWLILTE
Sbjct: 121 GAMQSLRRELSSGLRPLHETFVALVRLFGSKGLANRGLEILAAMERLNYDIRQAWLILTE 180

Query: 181 ELVRSKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240
           ELVR+KYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVRNKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 253
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 252

[Close]

BLAST of CSPI01G32810 vs. NCBI nr
Match: XP_008443746.1 (PREDICTED: uncharacterized protein LOC103487261 isoform X1 [Cucumis melo])

HSP 1 Score: 478.4 bits (1230), Expect = 4.3e-131
Identity = 244/252 (96.83%), Postives = 248/252 (98.41%), Query Frame = 0


Query: 1   MSKFLLSHAHLLTLPSNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQPKDNDS 60
           MSK LLSHAHLLTLP NHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQ KD+DS
Sbjct: 1   MSKLLLSHAHLLTLPYNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQLKDDDS 60

Query: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE
Sbjct: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120

Query: 121 GAMQSLRRELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLRRELS+GL PLHETFVALVRLFGSKGLANRGLEILAAME+LNYDIRQAWLILTE
Sbjct: 121 GAMQSLRRELSSGLRPLHETFVALVRLFGSKGLANRGLEILAAMERLNYDIRQAWLILTE 180

Query: 181 ELVRSKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240
           ELVR+KYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVRNKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 253
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 252

[Close]

BLAST of CSPI01G32810 vs. NCBI nr
Match: XP_038879291.1 (uncharacterized protein LOC120071230 [Benincasa hispida])

HSP 1 Score: 462.2 bits (1188), Expect = 3.2e-126
Identity = 234/252 (92.86%), Postives = 242/252 (96.03%), Query Frame = 0


Query: 1   MSKFLLSHAHLLTLPSNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQPKDNDS 60
           MSKFLLSHAHLLTLP+ H SFSLNHG++PIRSVLSAPDKRGRKKRQ+R QQQL  KD+DS
Sbjct: 1   MSKFLLSHAHLLTLPNKHHSFSLNHGVVPIRSVLSAPDKRGRKKRQARQQQQLHSKDHDS 60

Query: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           T+LE SLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSH LNGDTE
Sbjct: 61  TALEKSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHVLNGDTE 120

Query: 121 GAMQSLRRELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLRRELSAGL PLHETFVALVRLFGSKGLA RGLEILAAMEKLNYDIRQAWLILTE
Sbjct: 121 GAMQSLRRELSAGLCPLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQAWLILTE 180

Query: 181 ELVRSKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240
           ELVR+KYLEDANKVFLKGAK GLRATDKIYDL+IEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVRNKYLEDANKVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 253
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 252

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BLAST of CSPI01G32810 vs. TAIR 10
Match: AT3G04260.1 (plastid transcriptionally active 3 )

HSP 1 Score: 320.9 bits (821), Expect = 1.1e-87
Identity = 165/234 (70.51%), Postives = 192/234 (82.05%), Query Frame = 0


Query: 26  GLLPIRSVLSAPDKRGRKKRQSRHQQQLQPKDNDS-------TSLENSLRFTFMEELMDR 85
           G+  IR  +SAP+K+ R++R+ +     +  D+ S       ++LE SLR TFM+ELM+R
Sbjct: 24  GISSIRCSISAPEKKPRRRRKQKRGDGAENDDSLSFGSGEAVSALERSLRLTFMDELMER 83

Query: 86  ARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTEGAMQSLRRELSAGLLPLH 145
           ARN D  GVS+VIYDM+AAGLSPGPRSFHGLVV+H LNGD +GAM SLR+EL AG  PL 
Sbjct: 84  ARNRDTSGVSEVIYDMIAAGLSPGPRSFHGLVVAHALNGDEQGAMHSLRKELGAGQRPLP 143

Query: 146 ETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQAWLILTEELVRSKYLEDANKVFLKG 205
           ET +ALVRL GSKG A RGLEILAAMEKL YDIRQAWLIL EEL+R  +LEDANKVFLKG
Sbjct: 144 ETMIALVRLSGSKGNATRGLEILAAMEKLKYDIRQAWLILVEELMRINHLEDANKVFLKG 203

Query: 206 AKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLSVQ 253
           A+ G+RATD++YDLMIEEDCKAGDHSNAL+ISYEMEAAGRMATTFHFNCLLSVQ
Sbjct: 204 ARGGMRATDQLYDLMIEEDCKAGDHSNALDISYEMEAAGRMATTFHFNCLLSVQ 257

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BLAST of CSPI01G32810 vs. TAIR 10
Match: AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-05
Identity = 35/122 (28.69%), Postives = 58/122 (47.54%), Query Frame = 0


Query: 131 SAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQ-AWLILTEELVRSKYLE 190
           S G  P   T+ AL+++FG  G+    L +L  ME+ +       +  L    VR+ + +
Sbjct: 309 SCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSK 368

Query: 191 DANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLL 250
           +A  V     K G+      Y  +I+   KAG    AL++ Y M+ AG +  T  +N +L
Sbjct: 369 EAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL 428

Query: 251 SV 252
           S+
Sbjct: 429 SL 430

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BLAST of CSPI01G32810 vs. TAIR 10
Match: AT1G18900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 1.1e-04
Identity = 37/171 (21.64%), Postives = 79/171 (46.20%), Query Frame = 0


Query: 69  FTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTEGAMQSLRR 128
           +T M   + RA+      ++ ++ +MV  G  P   +++ L+ S+        AM    +
Sbjct: 367 YTTMVGNLGRAKQFG--AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 426

Query: 129 ELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEK--LNYDIRQAWLILTEELVRSK 188
              AG  P   T+  L+ +    G  +  +++   M+   L+ D    + ++   L ++ 
Sbjct: 427 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD-TFTYSVIINCLGKAG 486

Query: 189 YLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAG 238
           +L  A+K+F +    G       Y++M++   KA ++ NAL++  +M+ AG
Sbjct: 487 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534

[Close]

BLAST of CSPI01G32810 vs. TAIR 10
Match: AT1G18900.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 1.1e-04
Identity = 37/171 (21.64%), Postives = 79/171 (46.20%), Query Frame = 0


Query: 69  FTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTEGAMQSLRR 128
           +T M   + RA+      ++ ++ +MV  G  P   +++ L+ S+        AM    +
Sbjct: 367 YTTMVGNLGRAKQFG--AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 426

Query: 129 ELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEK--LNYDIRQAWLILTEELVRSK 188
              AG  P   T+  L+ +    G  +  +++   M+   L+ D    + ++   L ++ 
Sbjct: 427 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD-TFTYSVIINCLGKAG 486

Query: 189 YLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAG 238
           +L  A+K+F +    G       Y++M++   KA ++ NAL++  +M+ AG
Sbjct: 487 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534

[Close]

BLAST of CSPI01G32810 vs. TAIR 10
Match: AT1G18900.3 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 1.1e-04
Identity = 37/171 (21.64%), Postives = 79/171 (46.20%), Query Frame = 0


Query: 69  FTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTEGAMQSLRR 128
           +T M   + RA+      ++ ++ +MV  G  P   +++ L+ S+        AM    +
Sbjct: 367 YTTMVGNLGRAKQFG--AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQ 426

Query: 129 ELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEK--LNYDIRQAWLILTEELVRSK 188
              AG  P   T+  L+ +    G  +  +++   M+   L+ D    + ++   L ++ 
Sbjct: 427 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD-TFTYSVIINCLGKAG 486

Query: 189 YLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAG 238
           +L  A+K+F +    G       Y++M++   KA ++ NAL++  +M+ AG
Sbjct: 487 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534

The following BLAST results are available for this feature:

BLAST of CSPI01G32810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64624	2.4e-04	28.69	Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop...	[more]

BLAST of CSPI01G32810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T4U0	2.1e-131	96.83	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B8T6	2.1e-131	96.83	uncharacterized protein LOC103487261 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B9H7	2.1e-131	96.83	uncharacterized protein LOC103487261 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1EQ88	2.3e-114	87.35	uncharacterized protein LOC111436825 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1L2D9	1.1e-113	87.75	uncharacterized protein LOC111499221 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CSPI01G32810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011660243.1	5.8e-136	100.00	uncharacterized protein LOC101209618 isoform X1 [Cucumis sativus] >KAE8653592.1 ...	[more]
KAA0038380.1	4.3e-131	96.83	Pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ97014...	[more]
XP_008443747.1	4.3e-131	96.83	PREDICTED: uncharacterized protein LOC103487261 isoform X2 [Cucumis melo]	[more]
XP_008443746.1	4.3e-131	96.83	PREDICTED: uncharacterized protein LOC103487261 isoform X1 [Cucumis melo]	[more]
XP_038879291.1	3.2e-126	92.86	uncharacterized protein LOC120071230 [Benincasa hispida]	[more]

BLAST of CSPI01G32810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04260.1	1.1e-87	70.51	plastid transcriptionally active 3	[more]
AT2G18940.1	1.7e-05	28.69	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G18900.1	1.1e-04	21.64	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G18900.2	1.1e-04	21.64	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G18900.3	1.1e-04	21.64	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 175..255 e-value: 6.3E-6 score: 27.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 45..174 e-value: 7.8E-6 score: 27.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..62
None	No IPR available	PANTHER	PTHR31407:SF5	PLASTID TRANSCRIPTIONALLY ACTIVE 3	coord: 23..253
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 23..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G32810.1	CSPI01G32810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0006979	response to oxidative stress
molecular_function	GO:0020037	heme binding
molecular_function	GO:0004601	peroxidase activity
molecular_function	GO:0005515	protein binding