CSPI01G31520 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G31520
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr1: 26204096 .. 26204299 (+)
RNA-Seq Expression	CSPI01G31520
Synteny	CSPI01G31520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTTGCAAAGTCAGAAACAATTACAAGACTTAGAGCTTAAAGTGGACAATGCAAGTACTCATCATCAAGCTCAGTCTGAAGTACTCAAGGCTGAGATGCAAGAGCTCAGATTGCATAACCAAGAGCTCAAATCGAAGAATCTAAAGCTCAAGGCTAAGAATAAGGTAATCATGAGGATGATAGAGCAAACCGCCAAGTAG

mRNA sequence

ATGCATTTGCAAAGTCAGAAACAATTACAAGACTTAGAGCTTAAAGTGGACAATGCAAGTACTCATCATCAAGCTCAGTCTGAAGTACTCAAGGCTGAGATGCAAGAGCTCAGATTGCATAACCAAGAGCTCAAATCGAAGAATCTAAAGCTCAAGGCTAAGAATAAGGTAATCATGAGGATGATAGAGCAAACCGCCAAGTAG

Coding sequence (CDS)

ATGCATTTGCAAAGTCAGAAACAATTACAAGACTTAGAGCTTAAAGTGGACAATGCAAGTACTCATCATCAAGCTCAGTCTGAAGTACTCAAGGCTGAGATGCAAGAGCTCAGATTGCATAACCAAGAGCTCAAATCGAAGAATCTAAAGCTCAAGGCTAAGAATAAGGTAATCATGAGGATGATAGAGCAAACCGCCAAGTAG

Protein sequence

MHLQSQKQLQDLELKVDNASTHHQAQSEVLKAEMQELRLHNQELKSKNLKLKAKNKVIMRMIEQTAK*

Homology

[Close]

BLAST of CSPI01G31520 vs. ExPASy TrEMBL
Match: A0A0A0M313 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G637940 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-24
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MHLQSQKQLQDLELKVDNASTHHQAQSEVLKAEMQELRLHNQELKSKNLKLKAKNKVIMR 60
          MHLQSQKQLQDLELKVDNASTHHQAQSEVLKAEMQELRLHNQELKSKNLKLKA+NKVIMR
Sbjct: 1  MHLQSQKQLQDLELKVDNASTHHQAQSEVLKAEMQELRLHNQELKSKNLKLKAQNKVIMR 60

Query: 61 MIEQTAK 68
          MIEQTAK
Sbjct: 61 MIEQTAK 67

[Close]

BLAST of CSPI01G31520 vs. ExPASy TrEMBL
Match: A0A0A0KJB9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G049020 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.8e-07
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 1   MHLQSQKQLQDLELKVDNASTHHQAQSEVLKAEMQELRLHNQELKSKNLKLKAKNKVIMR 60
           MH QSQKQL+D +LK+DN + HHQ Q E LKA+MQEL L  QE       LK +N+VIM 
Sbjct: 78  MHFQSQKQLEDFKLKLDNKNHHHQVQIEGLKAKMQELILQEQE-------LKVQNQVIME 137

Query: 61  MIEQTAK 68
           M++QT +
Sbjct: 138 MVKQTTR 137

[Close]

BLAST of CSPI01G31520 vs. ExPASy TrEMBL
Match: A0A5A7T3H5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001500 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.5e-07
Identity = 33/64 (51.56%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 1  MHLQSQKQLQDLELKVDNASTHHQAQSEVLKAEMQELRLHNQELKSKNLKLKAKNKVIMR 60
          MHL+SQKQL DLELK DN++ H+Q Q +  KA+M  L+ HNQELK+K  +++ +N++ M 
Sbjct: 34 MHLRSQKQLHDLELKCDNSNAHNQGQMDQPKAKMNGLKTHNQELKTKLQEIRKQNEMPMG 93

Query: 61 MIEQ 65
          ++EQ
Sbjct: 94 LVEQ 97

[Close]

BLAST of CSPI01G31520 vs. ExPASy TrEMBL
Match: A0A5D3C5U6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001830 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.5e-06
Identity = 39/67 (58.21%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 1   MHLQSQKQLQDLELKVDNASTHHQAQSEVLKAEMQELRLHNQELKSKNLKLKAKNKVIMR 60
           MHL  QKQL+D E+K+ N + HHQAQ E LKAEMQELR  NQE       LK +  VIM 
Sbjct: 142 MHLCCQKQLRDFEVKLQNINHHHQAQIEGLKAEMQELRSQNQE-------LKVQIHVIME 201

Query: 61  MIEQTAK 68
           MIEQ +K
Sbjct: 202 MIEQISK 201

[Close]

BLAST of CSPI01G31520 vs. NCBI nr
Match: KGN66596.1 (hypothetical protein Csa_007620 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 4.1e-24
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MHLQSQKQLQDLELKVDNASTHHQAQSEVLKAEMQELRLHNQELKSKNLKLKAKNKVIMR 60
          MHLQSQKQLQDLELKVDNASTHHQAQSEVLKAEMQELRLHNQELKSKNLKLKA+NKVIMR
Sbjct: 1  MHLQSQKQLQDLELKVDNASTHHQAQSEVLKAEMQELRLHNQELKSKNLKLKAQNKVIMR 60

Query: 61 MIEQTAK 68
          MIEQTAK
Sbjct: 61 MIEQTAK 67

[Close]

BLAST of CSPI01G31520 vs. NCBI nr
Match: KGN49653.1 (hypothetical protein Csa_018510 [Cucumis sativus])

HSP 1 Score: 63.5 bits (153), Expect = 7.9e-07
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 1   MHLQSQKQLQDLELKVDNASTHHQAQSEVLKAEMQELRLHNQELKSKNLKLKAKNKVIMR 60
           MH QSQKQL+D +LK+DN + HHQ Q E LKA+MQEL L  QE       LK +N+VIM 
Sbjct: 78  MHFQSQKQLEDFKLKLDNKNHHHQVQIEGLKAKMQELILQEQE-------LKVQNQVIME 137

Query: 61  MIEQTAK 68
           M++QT +
Sbjct: 138 MVKQTTR 137

[Close]

BLAST of CSPI01G31520 vs. NCBI nr
Match: KAA0038042.1 (hypothetical protein E6C27_scaffold36G002430 [Cucumis melo var. makuwa] >TYK20561.1 hypothetical protein E5676_scaffold237G001500 [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 1.8e-06
Identity = 33/64 (51.56%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 1  MHLQSQKQLQDLELKVDNASTHHQAQSEVLKAEMQELRLHNQELKSKNLKLKAKNKVIMR 60
          MHL+SQKQL DLELK DN++ H+Q Q +  KA+M  L+ HNQELK+K  +++ +N++ M 
Sbjct: 34 MHLRSQKQLHDLELKCDNSNAHNQGQMDQPKAKMNGLKTHNQELKTKLQEIRKQNEMPMG 93

Query: 61 MIEQ 65
          ++EQ
Sbjct: 94 LVEQ 97

[Close]

BLAST of CSPI01G31520 vs. NCBI nr
Match: TYK07283.1 (hypothetical protein E5676_scaffold606G001830 [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 5.1e-06
Identity = 39/67 (58.21%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 1   MHLQSQKQLQDLELKVDNASTHHQAQSEVLKAEMQELRLHNQELKSKNLKLKAKNKVIMR 60
           MHL  QKQL+D E+K+ N + HHQAQ E LKAEMQELR  NQE       LK +  VIM 
Sbjct: 142 MHLCCQKQLRDFEVKLQNINHHHQAQIEGLKAEMQELRSQNQE-------LKVQIHVIME 201

Query: 61  MIEQTAK 68
           MIEQ +K
Sbjct: 202 MIEQISK 201

The following BLAST results are available for this feature:

BLAST of CSPI01G31520 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI01G31520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M313	2.0e-24	98.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G637940 PE=4 SV=1	[more]
A0A0A0KJB9	3.8e-07	55.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G049020 PE=4 SV=1	[more]
A0A5A7T3H5	8.5e-07	51.56	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C5U6	2.5e-06	58.21	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CSPI01G31520 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN66596.1	4.1e-24	98.51	hypothetical protein Csa_007620 [Cucumis sativus]	[more]
KGN49653.1	7.9e-07	55.22	hypothetical protein Csa_018510 [Cucumis sativus]	[more]
KAA0038042.1	1.8e-06	51.56	hypothetical protein E6C27_scaffold36G002430 [Cucumis melo var. makuwa] >TYK2056...	[more]
TYK07283.1	5.1e-06	58.21	hypothetical protein E5676_scaffold606G001830 [Cucumis melo var. makuwa]	[more]

BLAST of CSPI01G31520 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G31520.1	CSPI01G31520.1	mRNA