CSPI01G30990 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G30990
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	CACTA en-spm transposon protein
Location	Chr1: 25523649 .. 25523960 (-)
RNA-Seq Expression	CSPI01G30990
Synteny	CSPI01G30990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACGAATCATTATAGAGTCAATTGAAGCTGGTGTTCAGATGATCTCTAGTGCGAAGACATACGAAATTGTATTAGAGAGTTGCTCAATGCAAATTCTTAATCCAAAAAGTGGTGAATCATTAGGTAGTAATGTGTCATCTACACGTGAGAAAGAGAAGAATGAGATGACATACCTTAAAGAAGCATATGAAAAGTTAGCAAATGAACTTGCAAAATTGGAACAAAGGTGGGCTGACATAAAAAAAAAGTTGGATCAAGAAGAGCAAGTAGAAGAGGATGCATCTTCAAACACTTGGGCACTTTTCTAA

mRNA sequence

ATGCAACGAATCATTATAGAGTCAATTGAAGCTGGTGTTCAGATGATCTCTAGTGCGAAGACATACGAAATTGTATTAGAGAGTTGCTCAATGCAAATTCTTAATCCAAAAAGTGGTGAATCATTAGGTAGTAATGTGTCATCTACACGTGAGAAAGAGAAGAATGAGATGACATACCTTAAAGAAGCATATGAAAAGTTAGCAAATGAACTTGCAAAATTGGAACAAAGGTGGGCTGACATAAAAAAAAAGTTGGATCAAGAAGAGCAAGTAGAAGAGGATGCATCTTCAAACACTTGGGCACTTTTCTAA

Coding sequence (CDS)

ATGCAACGAATCATTATAGAGTCAATTGAAGCTGGTGTTCAGATGATCTCTAGTGCGAAGACATACGAAATTGTATTAGAGAGTTGCTCAATGCAAATTCTTAATCCAAAAAGTGGTGAATCATTAGGTAGTAATGTGTCATCTACACGTGAGAAAGAGAAGAATGAGATGACATACCTTAAAGAAGCATATGAAAAGTTAGCAAATGAACTTGCAAAATTGGAACAAAGGTGGGCTGACATAAAAAAAAAGTTGGATCAAGAAGAGCAAGTAGAAGAGGATGCATCTTCAAACACTTGGGCACTTTTCTAA

Protein sequence

MQRIIIESIEAGVQMISSAKTYEIVLESCSMQILNPKSGESLGSNVSSTREKEKNEMTYLKEAYEKLANELAKLEQRWADIKKKLDQEEQVEEDASSNTWALF*

Homology

[Close]

BLAST of CSPI01G30990 vs. ExPASy TrEMBL
Match: A0A5D3B974 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001450 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.6e-25
Identity = 73/101 (72.28%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 3   RIIIESIEAGVQMISSAKTYEIVLESCSMQILNPKSGESLGSNVSSTREKEKNEMTYLKE 62
           RII ES EAGVQ ISSAK  EIVL S S+Q +NPKSGESLGSN+SSTREKEKNEMTYLKE
Sbjct: 460 RIIAESTEAGVQTISSAKACEIVLGSRSIQTVNPKSGESLGSNMSSTREKEKNEMTYLKE 519

Query: 63  AYEKLANELAKLEQRWADIKKKLD----QEEQVEEDASSNT 100
             EKL +ELAK EQRW D+KKKLD     EE+ E++A SNT
Sbjct: 520 VNEKLTHELAKWEQRWTDVKKKLDLGAEGEEKEEDNAPSNT 560

[Close]

BLAST of CSPI01G30990 vs. ExPASy TrEMBL
Match: A0A5A7T3V0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00730 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.6e-25
Identity = 73/101 (72.28%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 3   RIIIESIEAGVQMISSAKTYEIVLESCSMQILNPKSGESLGSNVSSTREKEKNEMTYLKE 62
           RII ES EAGVQ ISSAK  EIVL S S+Q +NPKSGESLGSN+SSTREKEKNEMTYLKE
Sbjct: 282 RIIAESTEAGVQTISSAKACEIVLGSRSIQTVNPKSGESLGSNMSSTREKEKNEMTYLKE 341

Query: 63  AYEKLANELAKLEQRWADIKKKLD----QEEQVEEDASSNT 100
             EKL +ELAK EQRW D+KKKLD     EE+ E++A SNT
Sbjct: 342 VNEKLTHELAKWEQRWTDVKKKLDLGAEGEEKEEDNAPSNT 382

[Close]

BLAST of CSPI01G30990 vs. ExPASy TrEMBL
Match: A0A5A7SJT9 (Formin-like protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002610 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.6e-25
Identity = 75/103 (72.82%), Postives = 81/103 (78.64%), Query Frame = 0


Query: 1   MQRIIIESIEAGVQMISSAKTYEIVLESCSMQILNPKSGESLGSNVSSTREKEKNEMTYL 60
           M+RII ES EAGV  ISSAK  EIVL S SMQ +NPKSGESLGSNVSSTREKEKNEM YL
Sbjct: 88  MKRIIAESTEAGVLTISSAKACEIVLGSRSMQTVNPKSGESLGSNVSSTREKEKNEMAYL 147

Query: 61  KEAYEKLANELAKLEQRWADIKKKLD----QEEQVEEDASSNT 100
           KE  EKL +ELAK EQRW DIKKKLD     EE+ E++A SNT
Sbjct: 148 KEVNEKLTHELAKWEQRWNDIKKKLDLGAEGEEEEEDNAPSNT 190

[Close]

BLAST of CSPI01G30990 vs. ExPASy TrEMBL
Match: A0A5D3D878 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1676G00080 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.1e-24
Identity = 74/103 (71.84%), Postives = 81/103 (78.64%), Query Frame = 0


Query: 1   MQRIIIESIEAGVQMISSAKTYEIVLESCSMQILNPKSGESLGSNVSSTREKEKNEMTYL 60
           M+RII ES +AGV  ISSAK  EIVL S SMQ +NPKSGESLGSNVSSTREKEKNEM YL
Sbjct: 481 MKRIIAESTKAGVLTISSAKACEIVLGSRSMQTVNPKSGESLGSNVSSTREKEKNEMAYL 540

Query: 61  KEAYEKLANELAKLEQRWADIKKKLD----QEEQVEEDASSNT 100
           KE  EKL +ELAK EQRW DIKKKLD     EE+ E++A SNT
Sbjct: 541 KEVNEKLTHELAKWEQRWNDIKKKLDLGVEGEEEEEDNAPSNT 583

[Close]

BLAST of CSPI01G30990 vs. ExPASy TrEMBL
Match: A0A5A7UI02 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001330 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.4e-23
Identity = 71/96 (73.96%), Postives = 76/96 (79.17%), Query Frame = 0


Query: 1   MQRIIIESIEAGVQMISSAKTYEIVLESCSMQILNPKSGESLGSNVSSTREKEKNEMTYL 60
           MQRII ES EAGV  ISSAK  E VL S SMQ LNPK+GE L SNVSSTREKEKNEMTYL
Sbjct: 54  MQRIIAESTEAGVLTISSAKACEFVLRSRSMQTLNPKTGELLRSNVSSTREKEKNEMTYL 113

Query: 61  KEAYEKLANELAKLEQRWADIKKKLD--QEEQVEED 95
           KEA EKL +ELAK EQRW  IKKKLD  +EE+ EE+
Sbjct: 114 KEANEKLTHELAKWEQRWVGIKKKLDLREEEEGEEE 149

[Close]

BLAST of CSPI01G30990 vs. NCBI nr
Match: KAA0036786.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 7.5e-25
Identity = 73/101 (72.28%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 3   RIIIESIEAGVQMISSAKTYEIVLESCSMQILNPKSGESLGSNVSSTREKEKNEMTYLKE 62
           RII ES EAGVQ ISSAK  EIVL S S+Q +NPKSGESLGSN+SSTREKEKNEMTYLKE
Sbjct: 282 RIIAESTEAGVQTISSAKACEIVLGSRSIQTVNPKSGESLGSNMSSTREKEKNEMTYLKE 341

Query: 63  AYEKLANELAKLEQRWADIKKKLD----QEEQVEEDASSNT 100
             EKL +ELAK EQRW D+KKKLD     EE+ E++A SNT
Sbjct: 342 VNEKLTHELAKWEQRWTDVKKKLDLGAEGEEKEEDNAPSNT 382

[Close]

BLAST of CSPI01G30990 vs. NCBI nr
Match: KAA0025954.1 (formin-like protein 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 7.5e-25
Identity = 75/103 (72.82%), Postives = 81/103 (78.64%), Query Frame = 0


Query: 1   MQRIIIESIEAGVQMISSAKTYEIVLESCSMQILNPKSGESLGSNVSSTREKEKNEMTYL 60
           M+RII ES EAGV  ISSAK  EIVL S SMQ +NPKSGESLGSNVSSTREKEKNEM YL
Sbjct: 88  MKRIIAESTEAGVLTISSAKACEIVLGSRSMQTVNPKSGESLGSNVSSTREKEKNEMAYL 147

Query: 61  KEAYEKLANELAKLEQRWADIKKKLD----QEEQVEEDASSNT 100
           KE  EKL +ELAK EQRW DIKKKLD     EE+ E++A SNT
Sbjct: 148 KEVNEKLTHELAKWEQRWNDIKKKLDLGAEGEEEEEDNAPSNT 190

[Close]

BLAST of CSPI01G30990 vs. NCBI nr
Match: TYJ95853.1 (uncharacterized protein E5676_scaffold110G001450 [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 7.5e-25
Identity = 73/101 (72.28%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 3   RIIIESIEAGVQMISSAKTYEIVLESCSMQILNPKSGESLGSNVSSTREKEKNEMTYLKE 62
           RII ES EAGVQ ISSAK  EIVL S S+Q +NPKSGESLGSN+SSTREKEKNEMTYLKE
Sbjct: 460 RIIAESTEAGVQTISSAKACEIVLGSRSIQTVNPKSGESLGSNMSSTREKEKNEMTYLKE 519

Query: 63  AYEKLANELAKLEQRWADIKKKLD----QEEQVEEDASSNT 100
             EKL +ELAK EQRW D+KKKLD     EE+ E++A SNT
Sbjct: 520 VNEKLTHELAKWEQRWTDVKKKLDLGAEGEEKEEDNAPSNT 560

[Close]

BLAST of CSPI01G30990 vs. NCBI nr
Match: TYK19771.1 (uncharacterized protein E5676_scaffold1676G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 122.5 bits (306), Expect = 2.2e-24
Identity = 74/103 (71.84%), Postives = 81/103 (78.64%), Query Frame = 0


Query: 1   MQRIIIESIEAGVQMISSAKTYEIVLESCSMQILNPKSGESLGSNVSSTREKEKNEMTYL 60
           M+RII ES +AGV  ISSAK  EIVL S SMQ +NPKSGESLGSNVSSTREKEKNEM YL
Sbjct: 481 MKRIIAESTKAGVLTISSAKACEIVLGSRSMQTVNPKSGESLGSNVSSTREKEKNEMAYL 540

Query: 61  KEAYEKLANELAKLEQRWADIKKKLD----QEEQVEEDASSNT 100
           KE  EKL +ELAK EQRW DIKKKLD     EE+ E++A SNT
Sbjct: 541 KEVNEKLTHELAKWEQRWNDIKKKLDLGVEGEEEEEDNAPSNT 583

[Close]

BLAST of CSPI01G30990 vs. NCBI nr
Match: KAA0053315.1 (hypothetical protein E6C27_scaffold102G001330 [Cucumis melo var. makuwa])

HSP 1 Score: 117.1 bits (292), Expect = 9.2e-23
Identity = 71/96 (73.96%), Postives = 76/96 (79.17%), Query Frame = 0


Query: 1   MQRIIIESIEAGVQMISSAKTYEIVLESCSMQILNPKSGESLGSNVSSTREKEKNEMTYL 60
           MQRII ES EAGV  ISSAK  E VL S SMQ LNPK+GE L SNVSSTREKEKNEMTYL
Sbjct: 54  MQRIIAESTEAGVLTISSAKACEFVLRSRSMQTLNPKTGELLRSNVSSTREKEKNEMTYL 113

Query: 61  KEAYEKLANELAKLEQRWADIKKKLD--QEEQVEED 95
           KEA EKL +ELAK EQRW  IKKKLD  +EE+ EE+
Sbjct: 114 KEANEKLTHELAKWEQRWVGIKKKLDLREEEEGEEE 149

The following BLAST results are available for this feature:

BLAST of CSPI01G30990 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI01G30990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3B974	3.6e-25	72.28	DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T3V0	3.6e-25	72.28	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A5A7SJT9	3.6e-25	72.82	Formin-like protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5D3D878	1.1e-24	71.84	DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7UI02	4.4e-23	73.96	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CSPI01G30990 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036786.1	7.5e-25	72.28	CACTA en-spm transposon protein [Cucumis melo var. makuwa]	[more]
KAA0025954.1	7.5e-25	72.82	formin-like protein 4 isoform X2 [Cucumis melo var. makuwa]	[more]
TYJ95853.1	7.5e-25	72.28	uncharacterized protein E5676_scaffold110G001450 [Cucumis melo var. makuwa]	[more]
TYK19771.1	2.2e-24	71.84	uncharacterized protein E5676_scaffold1676G00080 [Cucumis melo var. makuwa]	[more]
KAA0053315.1	9.2e-23	73.96	hypothetical protein E6C27_scaffold102G001330 [Cucumis melo var. makuwa]	[more]

BLAST of CSPI01G30990 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G30990.1	CSPI01G30990.1	mRNA