Homology
BLAST of CSPI01G30140 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 145.6 bits (366), Expect = 6.5e-34
Identity = 80/204 (39.22%), Postives = 119/204 (58.33%), Query Frame = 0
Query: 7 LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLK--QLSSIFAPISYAHMVFDHFPQPD 66
LL +CK+ + ++ +HA++I GL +KL++ LS F + YA VF +P+
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98
Query: 67 LFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQV 126
L ++NT+ + A S S S K + L+PN Y+F F K C EG+Q+
Sbjct: 99 LLIWNTMFRGHALS--SDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 158
Query: 127 RVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKM 186
H +KLG + +L+V +LI MYV + DA KVFD SP+RD+ S+ ++ GYA G +
Sbjct: 159 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 218
Query: 187 DEARQLFDEMPEKDVVSWTTMISG 209
+ A++LFDE+P KDVVSW MISG
Sbjct: 219 ENAQKLFDEIPVKDVVSWNAMISG 240
BLAST of CSPI01G30140 vs. ExPASy Swiss-Prot
Match:
O49399 (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E101 PE=3 SV=2)
HSP 1 Score: 139.4 bits (350), Expect = 4.7e-32
Identity = 78/199 (39.20%), Postives = 112/199 (56.28%), Query Frame = 0
Query: 12 KSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAP--ISYAHMVFDHFPQPDLFLYN 71
KS +I+Q HA ++ TGL +KL+ ++ P +SYAH + + P+ F +N
Sbjct: 50 KSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHN 109
Query: 72 TIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAI 131
++I+ A S+T + T FR ++ + P++YSF F K C + G EG Q+ I
Sbjct: 110 SVIRAYANSSTPEV-ALTVFREMLLGP-VFPDKYSFTFVLKACAAFCGFEEGRQIHGLFI 169
Query: 132 KLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQ 191
K GL ++FV N L+ +Y + ARKV D P RD SWN +LS Y G +DEAR
Sbjct: 170 KSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARA 229
Query: 192 LFDEMPEKDVVSWTTMISG 209
LFDEM E++V SW MISG
Sbjct: 230 LFDEMEERNVESWNFMISG 246
BLAST of CSPI01G30140 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 1.8e-31
Identity = 77/201 (38.31%), Postives = 113/201 (56.22%), Query Frame = 0
Query: 8 LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFL 67
L KS + K+++A +I GL K++ I + YA +F+ P++FL
Sbjct: 17 LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKI-EDMDYATRLFNQVSNPNVFL 76
Query: 68 YNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVH 127
YN+II+ ++ D ++ L+R +P++++F F FK C S G+QV H
Sbjct: 77 YNSIIRAYTHNSL-YCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGH 136
Query: 128 AIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEA 187
K G ++ NALI MY+ D +VDA KVFD RD+ SWN +LSGYARLG+M +A
Sbjct: 137 LCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 196
Query: 188 RQLFDEMPEKDVVSWTTMISG 209
+ LF M +K +VSWT MISG
Sbjct: 197 KGLFHLMLDKTIVSWTAMISG 215
BLAST of CSPI01G30140 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 131.0 bits (328), Expect = 1.7e-29
Identity = 79/213 (37.09%), Postives = 111/213 (52.11%), Query Frame = 0
Query: 8 LSSCKSFRQIKQVHARLITTGLILHPIPTNKLL----KQLSSIFAPISYAHMVFDHFPQP 67
L C ++KQ+HAR++ TGL+ K L SS F P YA +VFD F +P
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP--YAQIVFDGFDRP 80
Query: 68 DLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLV-----PNQYSFAFAFKGCGSGVGV 127
D FL+N +I+ FS + + RSL+ +R++ N Y+F K C +
Sbjct: 81 DTFLWNLMIR--GFSCSDEPE-----RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAF 140
Query: 128 LEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGY 187
E Q+ KLG EN+++ N+LI Y A +FD P D SWN ++ GY
Sbjct: 141 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 200
Query: 188 ARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQ 212
+ GKMD A LF +M EK+ +SWTTMISG +Q
Sbjct: 201 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQ 224
BLAST of CSPI01G30140 vs. ExPASy Swiss-Prot
Match:
Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)
HSP 1 Score: 130.6 bits (327), Expect = 2.2e-29
Identity = 68/208 (32.69%), Postives = 113/208 (54.33%), Query Frame = 0
Query: 7 LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQL---SSIFAP---ISYAHMVFDHF 66
LL SC SF +K +H L+ T LI ++LL S+ P + YA+ +F
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQI 77
Query: 67 PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLE 126
P+LF++N +I+ FST + F + + R+ P+ +F F K VL
Sbjct: 78 QNPNLFVFNLLIR--CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 137
Query: 127 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 186
GEQ ++ G +N+++V N+L+ MY N F+ A ++F RD+ SW M++GY +
Sbjct: 138 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 197
Query: 187 LGKMDEARQLFDEMPEKDVVSWTTMISG 209
G ++ AR++FDEMP +++ +W+ MI+G
Sbjct: 198 CGMVENAREMFDEMPHRNLFTWSIMING 223
BLAST of CSPI01G30140 vs. ExPASy TrEMBL
Match:
A0A0A0LX83 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G612890 PE=3 SV=1)
HSP 1 Score: 431.4 bits (1108), Expect = 2.2e-117
Identity = 211/212 (99.53%), Postives = 212/212 (100.00%), Query Frame = 0
Query: 1 MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF 60
MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF
Sbjct: 1 MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF 60
Query: 61 PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLE 120
PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIR+ERLVPNQYSFAFAFKGCGSGVGVLE
Sbjct: 61 PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLE 120
Query: 121 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 180
GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR
Sbjct: 121 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 180
Query: 181 LGKMDEARQLFDEMPEKDVVSWTTMISGCLQV 213
LGKMDEARQLFDEMPEKDVVSWTTMISGCLQV
Sbjct: 181 LGKMDEARQLFDEMPEKDVVSWTTMISGCLQV 212
BLAST of CSPI01G30140 vs. ExPASy TrEMBL
Match:
A0A1S3BNM1 (pentatricopeptide repeat-containing protein At5g66520-like OS=Cucumis melo OX=3656 GN=LOC103492046 PE=3 SV=1)
HSP 1 Score: 416.8 bits (1070), Expect = 5.6e-113
Identity = 202/212 (95.28%), Postives = 209/212 (98.58%), Query Frame = 0
Query: 1 MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF 60
MVRCDFLL SCKSFRQIKQVHA+LIT+GLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF
Sbjct: 1 MVRCDFLLGSCKSFRQIKQVHAQLITSGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF 60
Query: 61 PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLE 120
PQPDLFLYNTIIKVLAFSTTSSADSFT+FRSLIR+ERLVPNQYSFAFAFK CGSGVGVLE
Sbjct: 61 PQPDLFLYNTIIKVLAFSTTSSADSFTRFRSLIREERLVPNQYSFAFAFKACGSGVGVLE 120
Query: 121 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 180
GEQVRVHA+KLGLENNLFVTNALIGMYVNLDFVVDARKVF+WSP RDMYSWNIMLSGYAR
Sbjct: 121 GEQVRVHALKLGLENNLFVTNALIGMYVNLDFVVDARKVFEWSPYRDMYSWNIMLSGYAR 180
Query: 181 LGKMDEARQLFDEMPEKDVVSWTTMISGCLQV 213
LGKMDEARQLFDEMPE+DVVSWTTMISGCLQV
Sbjct: 181 LGKMDEARQLFDEMPERDVVSWTTMISGCLQV 212
BLAST of CSPI01G30140 vs. ExPASy TrEMBL
Match:
A0A6J1HU41 (pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita maxima OX=3661 GN=LOC111466592 PE=3 SV=1)
HSP 1 Score: 349.7 bits (896), Expect = 8.4e-93
Identity = 173/208 (83.17%), Postives = 184/208 (88.46%), Query Frame = 0
Query: 6 FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPD 65
FLL CKS QIKQ HA+LITTGL+LHPI TNKLLK LS S F ISYA MVFDHFPQPD
Sbjct: 12 FLLDFCKSIHQIKQTHAQLITTGLVLHPIATNKLLKLLSFSRFGSISYAQMVFDHFPQPD 71
Query: 66 LFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQV 125
LFLYNTIIK A S TSSADSFT+FRSLIRD LVPNQYSFAFAFKGCG+ VGVLEGEQV
Sbjct: 72 LFLYNTIIKAHAISATSSADSFTRFRSLIRDGSLVPNQYSFAFAFKGCGNAVGVLEGEQV 131
Query: 126 RVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKM 185
RVHA+KLGLENNLFV NALIGMYVNL FV DARKVFDWS RDMYSWNIMLSGYA+LGKM
Sbjct: 132 RVHAVKLGLENNLFVMNALIGMYVNLGFVGDARKVFDWSTIRDMYSWNIMLSGYAKLGKM 191
Query: 186 DEARQLFDEMPEKDVVSWTTMISGCLQV 213
D+AR+LFDEMPE+DVVSWTTMI+GC+QV
Sbjct: 192 DDARELFDEMPERDVVSWTTMIAGCVQV 219
BLAST of CSPI01G30140 vs. ExPASy TrEMBL
Match:
A0A6J1EIF4 (pentatricopeptide repeat-containing protein At3g62890-like OS=Cucurbita moschata OX=3662 GN=LOC111434526 PE=3 SV=1)
HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92
Identity = 173/208 (83.17%), Postives = 184/208 (88.46%), Query Frame = 0
Query: 6 FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPD 65
FLL CKS QIKQ HA+LITTGL+LHPI TNKLLK LS S FA ISYA MVFDHFPQPD
Sbjct: 12 FLLDFCKSIHQIKQTHAQLITTGLVLHPIATNKLLKLLSFSRFASISYAQMVFDHFPQPD 71
Query: 66 LFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQV 125
LFLYNTIIK A S TSSADSFT+FRSLIRD RLVPNQYSFAFAFKGCG+ VGVLEGEQV
Sbjct: 72 LFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSFAFAFKGCGNAVGVLEGEQV 131
Query: 126 RVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKM 185
R HA+KLGLENNLFV NALIGMYVNL V DARKVFDWS RDMYSWNIMLSGYA+LGKM
Sbjct: 132 RAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTIRDMYSWNIMLSGYAKLGKM 191
Query: 186 DEARQLFDEMPEKDVVSWTTMISGCLQV 213
D+AR+LFDEMPE+DVVSWTTMI+GC+QV
Sbjct: 192 DDARELFDEMPERDVVSWTTMIAGCVQV 219
BLAST of CSPI01G30140 vs. ExPASy TrEMBL
Match:
A0A5A7UA76 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold773G00170 PE=3 SV=1)
HSP 1 Score: 315.1 bits (806), Expect = 2.3e-82
Identity = 151/158 (95.57%), Postives = 156/158 (98.73%), Query Frame = 0
Query: 55 MVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGS 114
MVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFT+FRSLIR+ERLVPNQYSFAFAFK CGS
Sbjct: 1 MVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTRFRSLIREERLVPNQYSFAFAFKACGS 60
Query: 115 GVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIM 174
GVGVLEGEQVRVHA+KLGLENNLFVTNALIGMYVNLDFVVDARKVF+WSP RDMYSWNIM
Sbjct: 61 GVGVLEGEQVRVHALKLGLENNLFVTNALIGMYVNLDFVVDARKVFEWSPYRDMYSWNIM 120
Query: 175 LSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQV 213
LSGYARLGKMDEARQLFDEMPE+DVVSWTTMISGCLQV
Sbjct: 121 LSGYARLGKMDEARQLFDEMPERDVVSWTTMISGCLQV 158
BLAST of CSPI01G30140 vs. NCBI nr
Match:
XP_004139110.1 (pentatricopeptide repeat-containing protein At5g66520 [Cucumis sativus] >KGN66465.1 hypothetical protein Csa_007004 [Cucumis sativus])
HSP 1 Score: 431.4 bits (1108), Expect = 4.5e-117
Identity = 211/212 (99.53%), Postives = 212/212 (100.00%), Query Frame = 0
Query: 1 MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF 60
MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF
Sbjct: 1 MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF 60
Query: 61 PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLE 120
PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIR+ERLVPNQYSFAFAFKGCGSGVGVLE
Sbjct: 61 PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLE 120
Query: 121 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 180
GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR
Sbjct: 121 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 180
Query: 181 LGKMDEARQLFDEMPEKDVVSWTTMISGCLQV 213
LGKMDEARQLFDEMPEKDVVSWTTMISGCLQV
Sbjct: 181 LGKMDEARQLFDEMPEKDVVSWTTMISGCLQV 212
BLAST of CSPI01G30140 vs. NCBI nr
Match:
XP_008450449.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis melo])
HSP 1 Score: 416.8 bits (1070), Expect = 1.2e-112
Identity = 202/212 (95.28%), Postives = 209/212 (98.58%), Query Frame = 0
Query: 1 MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF 60
MVRCDFLL SCKSFRQIKQVHA+LIT+GLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF
Sbjct: 1 MVRCDFLLGSCKSFRQIKQVHAQLITSGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF 60
Query: 61 PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLE 120
PQPDLFLYNTIIKVLAFSTTSSADSFT+FRSLIR+ERLVPNQYSFAFAFK CGSGVGVLE
Sbjct: 61 PQPDLFLYNTIIKVLAFSTTSSADSFTRFRSLIREERLVPNQYSFAFAFKACGSGVGVLE 120
Query: 121 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 180
GEQVRVHA+KLGLENNLFVTNALIGMYVNLDFVVDARKVF+WSP RDMYSWNIMLSGYAR
Sbjct: 121 GEQVRVHALKLGLENNLFVTNALIGMYVNLDFVVDARKVFEWSPYRDMYSWNIMLSGYAR 180
Query: 181 LGKMDEARQLFDEMPEKDVVSWTTMISGCLQV 213
LGKMDEARQLFDEMPE+DVVSWTTMISGCLQV
Sbjct: 181 LGKMDEARQLFDEMPERDVVSWTTMISGCLQV 212
BLAST of CSPI01G30140 vs. NCBI nr
Match:
XP_038878435.1 (pentatricopeptide repeat-containing protein At5g66520-like [Benincasa hispida])
HSP 1 Score: 388.3 bits (996), Expect = 4.4e-104
Identity = 192/219 (87.67%), Postives = 201/219 (91.78%), Query Frame = 0
Query: 1 MVRCD------FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSI-FAPISYA 60
M+RCD FLL SCKS QIKQVHA+LITTGLI+HPIPTNKLLK +SS FAPISYA
Sbjct: 1 MIRCDFTSKLFFLLDSCKSIHQIKQVHAQLITTGLIVHPIPTNKLLKLISSSRFAPISYA 60
Query: 61 HMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCG 120
HMVFDH PQPDLFLYNTIIK LA STTSSADSFT+FRSLIR+ERLVPNQYSFAF FKGCG
Sbjct: 61 HMVFDHCPQPDLFLYNTIIKALALSTTSSADSFTRFRSLIREERLVPNQYSFAFVFKGCG 120
Query: 121 SGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNI 180
+GVGVLEGEQVRVHA+KLGLENNLFV NALIGMYVNL FVVDARKVFDWSPNRDMYSWNI
Sbjct: 121 NGVGVLEGEQVRVHAVKLGLENNLFVMNALIGMYVNLGFVVDARKVFDWSPNRDMYSWNI 180
Query: 181 MLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQV 213
MLSGYARLGKMDEARQLFDEMPE+DVVSWTTMISGCLQV
Sbjct: 181 MLSGYARLGKMDEARQLFDEMPERDVVSWTTMISGCLQV 219
BLAST of CSPI01G30140 vs. NCBI nr
Match:
XP_023529533.1 (pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 350.1 bits (897), Expect = 1.3e-92
Identity = 174/208 (83.65%), Postives = 185/208 (88.94%), Query Frame = 0
Query: 6 FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPD 65
FLL CKS QIKQ HA+LITTGL+LHPI TNKLLK LS S FA ISYA MVFDHFPQPD
Sbjct: 12 FLLDFCKSIHQIKQTHAQLITTGLVLHPIATNKLLKLLSFSRFASISYAQMVFDHFPQPD 71
Query: 66 LFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQV 125
LFLYNTIIK A S TSSADSFT+FRSLIRD RLVPNQYSFAFAFKGCG+ VGVLEGEQV
Sbjct: 72 LFLYNTIIKAHAISATSSADSFTRFRSLIRDGRLVPNQYSFAFAFKGCGNAVGVLEGEQV 131
Query: 126 RVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKM 185
RVHA+KLGLENNLFV NALIGMYVNL FV ARKVFDWS RDMYSWNIMLSGYA+LGKM
Sbjct: 132 RVHAVKLGLENNLFVMNALIGMYVNLGFVGYARKVFDWSTIRDMYSWNIMLSGYAKLGKM 191
Query: 186 DEARQLFDEMPEKDVVSWTTMISGCLQV 213
D+AR+LFDEMPE+DVVSWTTMI+GC+QV
Sbjct: 192 DDARELFDEMPERDVVSWTTMIAGCVQV 219
BLAST of CSPI01G30140 vs. NCBI nr
Match:
XP_022967088.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima])
HSP 1 Score: 349.7 bits (896), Expect = 1.7e-92
Identity = 173/208 (83.17%), Postives = 184/208 (88.46%), Query Frame = 0
Query: 6 FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPD 65
FLL CKS QIKQ HA+LITTGL+LHPI TNKLLK LS S F ISYA MVFDHFPQPD
Sbjct: 12 FLLDFCKSIHQIKQTHAQLITTGLVLHPIATNKLLKLLSFSRFGSISYAQMVFDHFPQPD 71
Query: 66 LFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQV 125
LFLYNTIIK A S TSSADSFT+FRSLIRD LVPNQYSFAFAFKGCG+ VGVLEGEQV
Sbjct: 72 LFLYNTIIKAHAISATSSADSFTRFRSLIRDGSLVPNQYSFAFAFKGCGNAVGVLEGEQV 131
Query: 126 RVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKM 185
RVHA+KLGLENNLFV NALIGMYVNL FV DARKVFDWS RDMYSWNIMLSGYA+LGKM
Sbjct: 132 RVHAVKLGLENNLFVMNALIGMYVNLGFVGDARKVFDWSTIRDMYSWNIMLSGYAKLGKM 191
Query: 186 DEARQLFDEMPEKDVVSWTTMISGCLQV 213
D+AR+LFDEMPE+DVVSWTTMI+GC+QV
Sbjct: 192 DDARELFDEMPERDVVSWTTMIAGCVQV 219
BLAST of CSPI01G30140 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 145.6 bits (366), Expect = 4.6e-35
Identity = 80/204 (39.22%), Postives = 119/204 (58.33%), Query Frame = 0
Query: 7 LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLK--QLSSIFAPISYAHMVFDHFPQPD 66
LL +CK+ + ++ +HA++I GL +KL++ LS F + YA VF +P+
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98
Query: 67 LFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQV 126
L ++NT+ + A S S S K + L+PN Y+F F K C EG+Q+
Sbjct: 99 LLIWNTMFRGHALS--SDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 158
Query: 127 RVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKM 186
H +KLG + +L+V +LI MYV + DA KVFD SP+RD+ S+ ++ GYA G +
Sbjct: 159 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 218
Query: 187 DEARQLFDEMPEKDVVSWTTMISG 209
+ A++LFDE+P KDVVSW MISG
Sbjct: 219 ENAQKLFDEIPVKDVVSWNAMISG 240
BLAST of CSPI01G30140 vs. TAIR 10
Match:
AT4G18840.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 139.4 bits (350), Expect = 3.3e-33
Identity = 78/199 (39.20%), Postives = 112/199 (56.28%), Query Frame = 0
Query: 12 KSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAP--ISYAHMVFDHFPQPDLFLYN 71
KS +I+Q HA ++ TGL +KL+ ++ P +SYAH + + P+ F +N
Sbjct: 50 KSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHN 109
Query: 72 TIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAI 131
++I+ A S+T + T FR ++ + P++YSF F K C + G EG Q+ I
Sbjct: 110 SVIRAYANSSTPEV-ALTVFREMLLGP-VFPDKYSFTFVLKACAAFCGFEEGRQIHGLFI 169
Query: 132 KLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQ 191
K GL ++FV N L+ +Y + ARKV D P RD SWN +LS Y G +DEAR
Sbjct: 170 KSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARA 229
Query: 192 LFDEMPEKDVVSWTTMISG 209
LFDEM E++V SW MISG
Sbjct: 230 LFDEMEERNVESWNFMISG 246
BLAST of CSPI01G30140 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 137.5 bits (345), Expect = 1.3e-32
Identity = 77/201 (38.31%), Postives = 113/201 (56.22%), Query Frame = 0
Query: 8 LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFL 67
L KS + K+++A +I GL K++ I + YA +F+ P++FL
Sbjct: 17 LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKI-EDMDYATRLFNQVSNPNVFL 76
Query: 68 YNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVH 127
YN+II+ ++ D ++ L+R +P++++F F FK C S G+QV H
Sbjct: 77 YNSIIRAYTHNSL-YCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGH 136
Query: 128 AIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEA 187
K G ++ NALI MY+ D +VDA KVFD RD+ SWN +LSGYARLG+M +A
Sbjct: 137 LCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 196
Query: 188 RQLFDEMPEKDVVSWTTMISG 209
+ LF M +K +VSWT MISG
Sbjct: 197 KGLFHLMLDKTIVSWTAMISG 215
BLAST of CSPI01G30140 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 131.0 bits (328), Expect = 1.2e-30
Identity = 79/213 (37.09%), Postives = 111/213 (52.11%), Query Frame = 0
Query: 8 LSSCKSFRQIKQVHARLITTGLILHPIPTNKLL----KQLSSIFAPISYAHMVFDHFPQP 67
L C ++KQ+HAR++ TGL+ K L SS F P YA +VFD F +P
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP--YAQIVFDGFDRP 80
Query: 68 DLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLV-----PNQYSFAFAFKGCGSGVGV 127
D FL+N +I+ FS + + RSL+ +R++ N Y+F K C +
Sbjct: 81 DTFLWNLMIR--GFSCSDEPE-----RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAF 140
Query: 128 LEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGY 187
E Q+ KLG EN+++ N+LI Y A +FD P D SWN ++ GY
Sbjct: 141 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 200
Query: 188 ARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQ 212
+ GKMD A LF +M EK+ +SWTTMISG +Q
Sbjct: 201 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQ 224
BLAST of CSPI01G30140 vs. TAIR 10
Match:
AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 130.6 bits (327), Expect = 1.5e-30
Identity = 68/208 (32.69%), Postives = 113/208 (54.33%), Query Frame = 0
Query: 7 LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQL---SSIFAP---ISYAHMVFDHF 66
LL SC SF +K +H L+ T LI ++LL S+ P + YA+ +F
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQI 77
Query: 67 PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLE 126
P+LF++N +I+ FST + F + + R+ P+ +F F K VL
Sbjct: 78 QNPNLFVFNLLIR--CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 137
Query: 127 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 186
GEQ ++ G +N+++V N+L+ MY N F+ A ++F RD+ SW M++GY +
Sbjct: 138 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 197
Query: 187 LGKMDEARQLFDEMPEKDVVSWTTMISG 209
G ++ AR++FDEMP +++ +W+ MI+G
Sbjct: 198 CGMVENAREMFDEMPHRNLFTWSIMING 223
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LN01 | 6.5e-34 | 39.22 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
O49399 | 4.7e-32 | 39.20 | Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana OX... | [more] |
Q9SIL5 | 1.8e-31 | 38.31 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
Q9FJY7 | 1.7e-29 | 37.09 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Q9FG16 | 2.2e-29 | 32.69 | Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LX83 | 2.2e-117 | 99.53 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G6128... | [more] |
A0A1S3BNM1 | 5.6e-113 | 95.28 | pentatricopeptide repeat-containing protein At5g66520-like OS=Cucumis melo OX=36... | [more] |
A0A6J1HU41 | 8.4e-93 | 83.17 | pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita maxima O... | [more] |
A0A6J1EIF4 | 1.1e-92 | 83.17 | pentatricopeptide repeat-containing protein At3g62890-like OS=Cucurbita moschata... | [more] |
A0A5A7UA76 | 2.3e-82 | 95.57 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
XP_004139110.1 | 4.5e-117 | 99.53 | pentatricopeptide repeat-containing protein At5g66520 [Cucumis sativus] >KGN6646... | [more] |
XP_008450449.1 | 1.2e-112 | 95.28 | PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis m... | [more] |
XP_038878435.1 | 4.4e-104 | 87.67 | pentatricopeptide repeat-containing protein At5g66520-like [Benincasa hispida] | [more] |
XP_023529533.1 | 1.3e-92 | 83.65 | pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita pepo subsp... | [more] |
XP_022967088.1 | 1.7e-92 | 83.17 | pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
AT1G08070.1 | 4.6e-35 | 39.22 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G18840.1 | 3.3e-33 | 39.20 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT2G20540.1 | 1.3e-32 | 38.31 | mitochondrial editing factor 21 | [more] |
AT5G66520.1 | 1.2e-30 | 37.09 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G06540.1 | 1.5e-30 | 32.69 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |