CSPI01G24380 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATGGCTTTTGTCTTTACCATTTTTGTTTCCCCAAAAGGAGGCAGTAATGGCAGACATAATATCTCATTTGGTTTGAATGAATAATATTGCAGAAACAAACCCAATATCAACACCCATTAGATCAGCACATAATAAGAGGTACATTTGGCTCAACCTGTTCTGTTTTCTTAATTTGTTTTTTCTGTATGTTCCTCTCTCAAAACTCAAAGGGGGTGTATATGTTAATTTGAATTCCCTGTTTACAAAATCATACTTAAGTTGGATCTTAATTAAGGGTTAATAGTTAGATCCTAGATTAGCGATGATAAAGTTAATTGTAATATGCTTGTCCTCTTCATTTATGCCTTCGTTTTGGGGTCAACACTCAAAGCACACACATACACATGGACATCATCAATTCATTCATATGCATATGTGTGTCAGTTGTCTTTCATATTATCATTGACCAACTGTATTAATTTATCATGAGATTTGAGGTGTAATAAATATGAAGAAGAAAAAAAAAAAAAAAAGACTTGCAGTAAGTAAAATATTTAAAAGAGATTATGATATTTTACTGGTTTCCTATACTTTTGGTTCTAGTTCATTTACTCGTAAAATAGTTATCTTTATTTTTCAAATCAATTTGTGATCAATGGATAAAAAATATGAAGCAAAGTTGAAATAGTATTTAAAAGTATTATTTGATTTGAACGGTTTGACCCATTCTGAGTATTAATTAAAAGAAAACATGTATGTATATATATATAGGGGATAGATATTGGAAGTGAAATAGGGAGAGAGGAAAGATGAACATGGGGGGAAGAAATTCAGGTGAATTGGGAAGTGGAAAATCAGGGAAGATGAGGCTAAAGAAGCTAAGAAAAAGGGAGGACATGTCGACAATAATGGTAGAAGAAGAAGATTACCACACAGGATTATCAGCCTCAGTTCCATTCCAATGGGAGTCAGAACCAGGAACTCCAAAGGCTAATTTGAATGATAGGAATAGTAGATCTCTTCTTTCTCCTCTCACTCCCCCACCTTCCTATTTCTCCAATCATCTTATCATCAACTCATCCCCTATGATCCATCTTTCTTCTAAGCCTTCTTTTAATAAGCCAAGTTTCCTCAACACTGTCTTCAGAAAGCTTTCTGTGAAGCCCAGTACTCTCCAGCCTCCCTCCCCTGCTTCTTCCTCCTCCTCAAGCTCTACCATGGAAAGACGGAGATATGCAAGTCCTAGAAGATTGTCGTTTGACTCGAGAGTGGACGATGACGACGACGACGAAAATGAAGACGGCAACTTAGAATCACCTGTTTCTACTTTGTTCTTTGGACGTCGAAGTGATAAAGGATGCTACCCAAAATTGGTCAAGGTATTCACTAGATATTCTAAATGAAATTAAACAGACGAAGTACTTCATATGATATATTGAGAAGAGAGCTATATATATATATATATATATACTACATGCGTTTTGCTTTGCTTTTTGTTTTTTTCTTGAGTTTACCCATTGATATAAGAGGGGATAGAAGAGAAGCATCAGTACTTGGGATCTTCATCATACTGTTCATATTCTCCTTTCATAAACAAAAATGTATTCCATCATATATGATTGCACATATTTCAATT GATGGCTTTTGTCTTTACCATTTTTGTTTCCCCAAAAGGAGGCAGTAATGGCAGACATAATATCTCATTTGGTTTGAATGAATAATATTGCAGAAACAAACCCAATATCAACACCCATTAGATCAGCACATAATAAGAGGGGATAGATATTGGAAGTGAAATAGGGAGAGAGGAAAGATGAACATGGGGGGAAGAAATTCAGGTGAATTGGGAAGTGGAAAATCAGGGAAGATGAGGCTAAAGAAGCTAAGAAAAAGGGAGGACATGTCGACAATAATGGTAGAAGAAGAAGATTACCACACAGGATTATCAGCCTCAGTTCCATTCCAATGGGAGTCAGAACCAGGAACTCCAAAGGCTAATTTGAATGATAGGAATAGTAGATCTCTTCTTTCTCCTCTCACTCCCCCACCTTCCTATTTCTCCAATCATCTTATCATCAACTCATCCCCTATGATCCATCTTTCTTCTAAGCCTTCTTTTAATAAGCCAAGTTTCCTCAACACTGTCTTCAGAAAGCTTTCTGTGAAGCCCAGTACTCTCCAGCCTCCCTCCCCTGCTTCTTCCTCCTCCTCAAGCTCTACCATGGAAAGACGGAGATATGCAAGTCCTAGAAGATTGTCGTTTGACTCGAGAGTGGACGATGACGACGACGACGAAAATGAAGACGGCAACTTAGAATCACCTGTTTCTACTTTGTTCTTTGGACGTCGAAGTGATAAAGGATGCTACCCAAAATTGGTCAAGGTATTCACTAGATATTCTAAATGAAATTAAACAGACGAAGTACTTCATATGATATATTGAGAAGAGAGCTATATATATATATATATATATACTACATGCGTTTTGCTTTGCTTTTTGTTTTTTTCTTGAGTTTACCCATTGATATAAGAGGGGATAGAAGAGAAGCATCAGTACTTGGGATCTTCATCATACTGTTCATATTCTCCTTTCATAAACAAAAATGTATTCCATCATATATGATTGCACATATTTCAATT ATGAACATGGGGGGAAGAAATTCAGGTGAATTGGGAAGTGGAAAATCAGGGAAGATGAGGCTAAAGAAGCTAAGAAAAAGGGAGGACATGTCGACAATAATGGTAGAAGAAGAAGATTACCACACAGGATTATCAGCCTCAGTTCCATTCCAATGGGAGTCAGAACCAGGAACTCCAAAGGCTAATTTGAATGATAGGAATAGTAGATCTCTTCTTTCTCCTCTCACTCCCCCACCTTCCTATTTCTCCAATCATCTTATCATCAACTCATCCCCTATGATCCATCTTTCTTCTAAGCCTTCTTTTAATAAGCCAAGTTTCCTCAACACTGTCTTCAGAAAGCTTTCTGTGAAGCCCAGTACTCTCCAGCCTCCCTCCCCTGCTTCTTCCTCCTCCTCAAGCTCTACCATGGAAAGACGGAGATATGCAAGTCCTAGAAGATTGTCGTTTGACTCGAGAGTGGACGATGACGACGACGACGAAAATGAAGACGGCAACTTAGAATCACCTGTTTCTACTTTGTTCTTTGGACGTCGAAGTGATAAAGGATGCTACCCAAAATTGGTCAAGGTATTCACTAGATATTCTAAATGA MNMGGRNSGELGSGKSGKMRLKKLRKREDMSTIMVEEEDYHTGLSASVPFQWESEPGTPKANLNDRNSRSLLSPLTPPPSYFSNHLIINSSPMIHLSSKPSFNKPSFLNTVFRKLSVKPSTLQPPSPASSSSSSSTMERRRYASPRRLSFDSRVDDDDDDENEDGNLESPVSTLFFGRRSDKGCYPKLVKVFTRYSK* Homology
BLAST of CSPI01G24380 vs. ExPASy Swiss-Prot
Match: Q9M160 (Uncharacterized protein At4g00950 OS=Arabidopsis thaliana OX=3702 GN=At4g00950 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.6e-05 Identity = 27/60 (45.00%), Postives = 33/60 (55.00%), Query Frame = 0
BLAST of CSPI01G24380 vs. ExPASy TrEMBL
Match: A0A0A0LYC9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533640 PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 4.8e-103 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of CSPI01G24380 vs. ExPASy TrEMBL
Match: A0A5D3BF70 (NADPH oxidase activator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00550 PE=4 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 5.7e-88 Identity = 176/198 (88.89%), Postives = 184/198 (92.93%), Query Frame = 0
BLAST of CSPI01G24380 vs. ExPASy TrEMBL
Match: A0A1S3C5A7 (uncharacterized protein At4g00950 OS=Cucumis melo OX=3656 GN=LOC103497034 PE=4 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 5.7e-88 Identity = 176/198 (88.89%), Postives = 184/198 (92.93%), Query Frame = 0
BLAST of CSPI01G24380 vs. ExPASy TrEMBL
Match: A0A6J1I3P2 (uncharacterized protein LOC111469381 OS=Cucurbita maxima OX=3661 GN=LOC111469381 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 4.6e-45 Identity = 118/182 (64.84%), Postives = 138/182 (75.82%), Query Frame = 0
BLAST of CSPI01G24380 vs. ExPASy TrEMBL
Match: A0A6J1HLP7 (uncharacterized protein LOC111464733 OS=Cucurbita moschata OX=3662 GN=LOC111464733 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 5.1e-44 Identity = 113/181 (62.43%), Postives = 133/181 (73.48%), Query Frame = 0
BLAST of CSPI01G24380 vs. NCBI nr
Match: XP_004145232.1 (uncharacterized protein LOC101203250 [Cucumis sativus] >KGN65857.1 hypothetical protein Csa_023180 [Cucumis sativus]) HSP 1 Score: 383.6 bits (984), Expect = 1.0e-102 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of CSPI01G24380 vs. NCBI nr
Match: XP_008457312.1 (PREDICTED: uncharacterized protein At4g00950 [Cucumis melo] >KAA0060003.1 NADPH oxidase activator [Cucumis melo var. makuwa] >TYJ97261.1 NADPH oxidase activator [Cucumis melo var. makuwa]) HSP 1 Score: 333.6 bits (854), Expect = 1.2e-87 Identity = 176/198 (88.89%), Postives = 184/198 (92.93%), Query Frame = 0
BLAST of CSPI01G24380 vs. NCBI nr
Match: XP_038894794.1 (uncharacterized protein LOC120083212 [Benincasa hispida] >XP_038894795.1 uncharacterized protein LOC120083212 [Benincasa hispida]) HSP 1 Score: 252.7 bits (644), Expect = 2.7e-63 Identity = 147/201 (73.13%), Postives = 166/201 (82.59%), Query Frame = 0
BLAST of CSPI01G24380 vs. NCBI nr
Match: XP_023519368.1 (uncharacterized protein LOC111782803 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 192.2 bits (487), Expect = 4.3e-45 Identity = 119/181 (65.75%), Postives = 136/181 (75.14%), Query Frame = 0
BLAST of CSPI01G24380 vs. NCBI nr
Match: XP_022970378.1 (uncharacterized protein LOC111469381 [Cucurbita maxima]) HSP 1 Score: 191.0 bits (484), Expect = 9.5e-45 Identity = 118/182 (64.84%), Postives = 138/182 (75.82%), Query Frame = 0
BLAST of CSPI01G24380 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 1.3e-12 Identity = 69/171 (40.35%), Postives = 89/171 (52.05%), Query Frame = 0
BLAST of CSPI01G24380 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08 Identity = 56/153 (36.60%), Postives = 79/153 (51.63%), Query Frame = 0
BLAST of CSPI01G24380 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). ) HSP 1 Score: 55.5 bits (132), Expect = 5.8e-08 Identity = 56/159 (35.22%), Postives = 75/159 (47.17%), Query Frame = 0
BLAST of CSPI01G24380 vs. TAIR 10
Match: AT4G00950.1 (Protein of unknown function (DUF688) ) HSP 1 Score: 50.4 bits (119), Expect = 1.9e-06 Identity = 27/60 (45.00%), Postives = 33/60 (55.00%), Query Frame = 0
BLAST of CSPI01G24380 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.1 bits (100), Expect = 3.0e-04 Identity = 44/130 (33.85%), Postives = 55/130 (42.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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