CSPI01G23810 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G23810
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	60S acidic ribosomal protein P0
Location	Chr1: 19292900 .. 19295287 (-)
RNA-Seq Expression	CSPI01G23810
Synteny	CSPI01G23810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAATCTCTATTCTTTTTCCCATTCCTACTTTAGGGTTTCTTCTTCCGGTAAAAGTTTTCCCCCAATTCTTCCGCCATGGTTCTCAAGCCCACCCGAGCTCAGAAGAAAACTAACTACGATCAGAAACTCTGTCGTCTCCTCGATGAGTATTCTCAGGTCCTCATCGTCGGTGCCGATAATGTCGGTTCCAACCAGCTTCAGAGCATCCGCAAGGGTCTTCGTGGCGATTCCATTATTCTTATGGGTAAGAACACCATGATGAAACGCTCCATTAGAATCCATTCTGAAAACACTGGTAACACCGCCGTCACTAACCTCCTCCCTCATCTTGTGGTACGGATTCCCTCTCAACTTTTACTCTTTTTTTTTTTTTTTTTTTTTTTTCCTTTTTGTTCGTTTTTTAAACGAGTTTTCTTCCATCCTTAGGGAAACGTTGGCTTGATCTTCACTAAAGGTGATTTGAAAGAAGTGAAGGAAGAAGTTGCCAAATACAAGGTAATATATTGCTTTCTGCTATGATGATATCCATGTACATTGTCTAAGGCTAGATTGGTAATTTCCGTAAAAGTTATGTGCTAGTTTTCAAATTTGTCCTTTTTTTTAAAATAATATTGTTATGATTAATGAGTTATCATTGTAAATATAATTTACTGTCTGATTATTTCACGATGGTAACCTTGTGATGGTTTGTTGATGAGATTATGGACTTGAATGAAACCGTATCATGATGTAACAGTCAAGTGAATAGTGATCCCTTATAAAAGTTGAAACGACGATCTTAACTATTACATGGATGCCTGCTGTTCATAGTTCAGTTTAGTTGGACTATTTGGAGGAAGTTTTTGTTCTATCTTATTTGGTTTTAAAGATTCAACCTTTAGTTTGTTTTCGAATTAGGTTCTTATAGAGTGCACATGTTGATTCGACACTGTTTTAATCTAATTGTTTAATAAATTATTCAATGAAGCTGTCTTAACATAACTTGATACAGACTTGAGGTATTTTGGTCTCACATGTCAATGATGAACATGCCTGGTGGCCTCCTGACGTAGATTGCTTCTTTGTACAATTTTTATACATGATGTGCATTTATGGAAACAGGTGGGAGCCCCAGCTCGTGTTGGCCTTGTTGCACCAATTGATGTGATTGTTCCTCCAGGAAACACTGGACTCGATCCATCCCAGACATCTTTCTTTCAGGTTTGTTATAAAACTAACTATCTCCATTTTTTAACCCTTCGATTTATAAAAGGATCTCAAGACGAAAGTCGAACTGATCTCAGGTGTTGAACATCCCAACAAAGATTAACAAAGGCACAGTTGAAATCATCACTCCCGTGGAGCTAATCAAGAAAGGAGACAAAGTCGGCTCATCCGAGGCTGCACTACTCTCTAAACTTGGGATAAGGCCCTTCTCTTATGGTCTCATTGTTGTTTCTGTCTATGAAAACGGTTCTGTTTTTAGTCCAGCGGTGCTTGATCTTACAGAGGAAGATCTTCTCGAGAAATTCCTTGCTGGGGTTTCCATGGTTGCCTCTCTCTCTCTTGCTGTGTCTTTCCCAACTCTTGCTGCTGCTCCCCACATGCTTATCAACGCCTATAAGAATGCTCTTGCCATTGCTGTCGCTACTGAATATTCATTCTCTGAGGCTGATGAAATCAAAGAATTCTTGAAGGTTCGTTAGGCTTGAACCCTTTTAGACACCTTTATATATCAAAGGCAAATCCAGTTTTGGTTTGATTTAGTTTTGTTTTGATCTCCTTAATTACTTTCTATATGAGACCATTTAACAGTTAAAACCTTAATTTTTCAACCTTCAAATTTGCTAAGCTTTTTATTACGTTCTTTAACTACTAACTTTTCTTTATATGGCATAATTTTATTGACATTTTAGTGGTATCTACTTATGTTAGACATGCGTAAGATCCATCTATCTGTTAAATGTAATTGTAAAAATCATACCATTTTGAAAAGAAATTTGTATTAGAAGATGCGAAGGAGTTATATTTGAAAATGGTATATGACAAACCTATGGAAAATTTTGTAGGATCCAAGCAAATTTGCAACTGCAGCAGCCCCAGCTGTGGCAGCCGAGTCGGTTGCTGCCGCCCCTGCCGCTGTGGAAGAAAAGAAGGAAGAACCAGAGGAAGAGTCGGATGAGGGGGATATGATCATGGGCCTATTTGACTGACTTCACAACAGCTAAGAAAATTATTCCAACCCATCTAGTTTTATGTGTTTCTTTTATGTTTTATATGGTTAGAGATATTTTGAGTTGGTTTATCATATGTCTGGTAAGGATTTGATTTTTTTTTTTTCCTTCTTTTTTCTGTTCATATTATGAACATGGACCACTCATTTTATCATGAATGGTGGTGAGTGGTTA

mRNA sequence

CCAATCTCTATTCTTTTTCCCATTCCTACTTTAGGGTTTCTTCTTCCGGTAAAAGTTTTCCCCCAATTCTTCCGCCATGGTTCTCAAGCCCACCCGAGCTCAGAAGAAAACTAACTACGATCAGAAACTCTGTCGTCTCCTCGATGAGTATTCTCAGGTCCTCATCGTCGGTGCCGATAATGTCGGTTCCAACCAGCTTCAGAGCATCCGCAAGGGTCTTCGTGGCGATTCCATTATTCTTATGGGTAAGAACACCATGATGAAACGCTCCATTAGAATCCATTCTGAAAACACTGGTAACACCGCCGTCACTAACCTCCTCCCTCATCTTGTGGGAAACGTTGGCTTGATCTTCACTAAAGGTGATTTGAAAGAAGTGAAGGAAGAAGTTGCCAAATACAAGGTGGGAGCCCCAGCTCGTGTTGGCCTTGTTGCACCAATTGATGTGATTGTTCCTCCAGGAAACACTGGACTCGATCCATCCCAGACATCTTTCTTTCAGGTGTTGAACATCCCAACAAAGATTAACAAAGGCACAGTTGAAATCATCACTCCCGTGGAGCTAATCAAGAAAGGAGACAAAGTCGGCTCATCCGAGGCTGCACTACTCTCTAAACTTGGGATAAGGCCCTTCTCTTATGGTCTCATTGTTGTTTCTGTCTATGAAAACGGTTCTGTTTTTAGTCCAGCGGTGCTTGATCTTACAGAGGAAGATCTTCTCGAGAAATTCCTTGCTGGGGTTTCCATGGTTGCCTCTCTCTCTCTTGCTGTGTCTTTCCCAACTCTTGCTGCTGCTCCCCACATGCTTATCAACGCCTATAAGAATGCTCTTGCCATTGCTGTCGCTACTGAATATTCATTCTCTGAGGCTGATGAAATCAAAGAATTCTTGAAGGATCCAAGCAAATTTGCAACTGCAGCAGCCCCAGCTGTGGCAGCCGAGTCGGTTGCTGCCGCCCCTGCCGCTGTGGAAGAAAAGAAGGAAGAACCAGAGGAAGAGTCGGATGAGGGGGATATGATCATGGGCCTATTTGACTGACTTCACAACAGCTAAGAAAATTATTCCAACCCATCTAGTTTTATGTGTTTCTTTTATGTTTTATATGGTTAGAGATATTTTGAGTTGGTTTATCATATGTCTGGTAAGGATTTGATTTTTTTTTTTTCCTTCTTTTTTCTGTTCATATTATGAACATGGACCACTCATTTTATCATGAATGGTGGTGAGTGGTTA

Coding sequence (CDS)

ATGGTTCTCAAGCCCACCCGAGCTCAGAAGAAAACTAACTACGATCAGAAACTCTGTCGTCTCCTCGATGAGTATTCTCAGGTCCTCATCGTCGGTGCCGATAATGTCGGTTCCAACCAGCTTCAGAGCATCCGCAAGGGTCTTCGTGGCGATTCCATTATTCTTATGGGTAAGAACACCATGATGAAACGCTCCATTAGAATCCATTCTGAAAACACTGGTAACACCGCCGTCACTAACCTCCTCCCTCATCTTGTGGGAAACGTTGGCTTGATCTTCACTAAAGGTGATTTGAAAGAAGTGAAGGAAGAAGTTGCCAAATACAAGGTGGGAGCCCCAGCTCGTGTTGGCCTTGTTGCACCAATTGATGTGATTGTTCCTCCAGGAAACACTGGACTCGATCCATCCCAGACATCTTTCTTTCAGGTGTTGAACATCCCAACAAAGATTAACAAAGGCACAGTTGAAATCATCACTCCCGTGGAGCTAATCAAGAAAGGAGACAAAGTCGGCTCATCCGAGGCTGCACTACTCTCTAAACTTGGGATAAGGCCCTTCTCTTATGGTCTCATTGTTGTTTCTGTCTATGAAAACGGTTCTGTTTTTAGTCCAGCGGTGCTTGATCTTACAGAGGAAGATCTTCTCGAGAAATTCCTTGCTGGGGTTTCCATGGTTGCCTCTCTCTCTCTTGCTGTGTCTTTCCCAACTCTTGCTGCTGCTCCCCACATGCTTATCAACGCCTATAAGAATGCTCTTGCCATTGCTGTCGCTACTGAATATTCATTCTCTGAGGCTGATGAAATCAAAGAATTCTTGAAGGATCCAAGCAAATTTGCAACTGCAGCAGCCCCAGCTGTGGCAGCCGAGTCGGTTGCTGCCGCCCCTGCCGCTGTGGAAGAAAAGAAGGAAGAACCAGAGGAAGAGTCGGATGAGGGGGATATGATCATGGGCCTATTTGACTGA

Protein sequence

MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNTMMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSKLGIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAAPHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPAAVEEKKEEPEEESDEGDMIMGLFD*

Homology

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BLAST of CSPI01G23810 vs. ExPASy Swiss-Prot
Match: P50346 (60S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 6.3e-134
Identity = 252/321 (78.50%), Postives = 283/321 (88.16%), Query Frame = 0


Query: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60
           M  K T+A+KK  YD KLC L++EY Q+L+V +DNVGSNQLQ+IRKGLRGDS++LMGKNT
Sbjct: 1   MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRS+R+H+E TGN A  NL+P LVGNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180
           PIDV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI+KGDKVGSSEAALL+K
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240
           LGIRPFSYGL+V+SVY+NGSVFSP VLDLTE+DL+ KF AGVSMV SLSLA+S+PTLAAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAA 240

Query: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVA-AAPAAVE 300
           PHM +NAYKN LA+AV T+YSF EAD++KE+LKDPSKFA AA  A AA S A AA A  E
Sbjct: 241 PHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAASGAPAAAAKEE 300

Query: 301 EKKEEPEEESDEGDMIMGLFD 321
           EKKEEP EESD+ DM   LFD
Sbjct: 301 EKKEEPAEESDD-DMGFSLFD 320

[Close]

BLAST of CSPI01G23810 vs. ExPASy Swiss-Prot
Match: Q42112 (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana OX=3702 GN=RPP0B PE=1 SV=2)

HSP 1 Score: 476.1 bits (1224), Expect = 3.1e-133
Identity = 249/320 (77.81%), Postives = 287/320 (89.69%), Query Frame = 0


Query: 2   VLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNTM 61
           ++K T+A+KK  YD KLC+L+DEY+Q+L+V ADNVGS QLQ+IRKGLRGDS++LMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSENTGNTA+ NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSKL 181
           IDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GDKVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAAP 241
           GIRPFSYGL+V SVY+NGSVFSP VLDLTE+ L+EKF +G+SMV SL+LAVS+PTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPAAVE-E 301
           HM INAYKNALAIAVATEY+F +A+++KE+LKDPSKFA A+  AV+A++   APAA + E
Sbjct: 241 HMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPAAAKVE 300

Query: 302 KKEEPEEESDEGDMIMGLFD 321
           +KEE +EE   GD   GLFD
Sbjct: 301 EKEESDEEDYGGD--FGLFD 318

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BLAST of CSPI01G23810 vs. ExPASy Swiss-Prot
Match: P41095 (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=60SP0 PE=1 SV=3)

HSP 1 Score: 474.6 bits (1220), Expect = 9.2e-133
Identity = 247/322 (76.71%), Postives = 288/322 (89.44%), Query Frame = 0


Query: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60
           M +K T+A+KK  YD+KLC+LLDEY++VLI  ADNVGSNQLQ IRKGLRGDSI+LMGKNT
Sbjct: 1   MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           +++R I++H++NTGN     L+P LVGNVGLIFTKGDLKEV+EEVAKYKVGAPARVGLVA
Sbjct: 61  LIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180
           P+DV+VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSE+ALL+K
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180

Query: 181 LGIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240
           LGIRPFSYGL++ +VY++GSVFSP VLDLTE+DL+EKF +GVSMVAS+SLA+S+PT+AAA
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAA 240

Query: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPAAV-- 300
           PHM +N YKN LA+AV TEYS+  AD+IKE+LKDPSKFA AA   VAA+S AAAP+A   
Sbjct: 241 PHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAA--PVAADSGAAAPSAAKE 300

Query: 301 EEKKEEPEEESDEGDMIMGLFD 321
           EEKKEEPEEESD GD+ M LFD
Sbjct: 301 EEKKEEPEEESD-GDLGMSLFD 319

[Close]

BLAST of CSPI01G23810 vs. ExPASy Swiss-Prot
Match: P57691 (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 7.7e-132
Identity = 251/324 (77.47%), Postives = 287/324 (88.58%), Query Frame = 0


Query: 2   VLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNTM 61
           ++K T+A+KK  YD KLC+L+DEY+Q+L+V ADNVGS QLQ+IRKGLRGDS++LMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSEN+GNTA+ NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSKL 181
           IDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GDKVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAAP 241
           GIRPFSYGL+V SVY+NGSVFSP VLDLTE+ L+EKF +G+SMV SL+LAVS+PTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAE-----SVAAAPA 301
           HM INAYKNALAIAVAT+Y+F +A+++KEFLKDPSKF  AAA AV+A+     + A A A
Sbjct: 241 HMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAA-AVSADAGGGSAQAGAAA 300

Query: 302 AVEEKKEEPEEESDEGDMIMGLFD 321
            VEEKKEE +EE  EG    GLFD
Sbjct: 301 KVEEKKEESDEEDYEGG--FGLFD 321

[Close]

BLAST of CSPI01G23810 vs. ExPASy Swiss-Prot
Match: O04204 (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.5e-127
Identity = 241/319 (75.55%), Postives = 276/319 (86.52%), Query Frame = 0


Query: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60
           M +K T+A+KK  YD KLC+LL+EYSQ+L+V ADNVGS QLQ+IRKGLRGDS++LMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRS+RIH++ TGN A  +LLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180
           PIDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALL+K
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240
           LGIRPFSYGL+V SVY+NGSVF+P VL+LTE+DL+EKF AGVSM+ +LSLA+S+PT+AAA
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPAAVEE 300
           PHM +NAYKN LA+A+ATEYSF +A+ +KEFLKDP+KFA A A  V+ ES  A  A   E
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVAVE 300

Query: 301 KKEEPEEESDEGDMIMGLF 320
             EE  EESD GDM   LF
Sbjct: 301 --EEAAEESD-GDMGFDLF 316

[Close]

BLAST of CSPI01G23810 vs. ExPASy TrEMBL
Match: A0A0A0LV50 (60S acidic ribosomal protein P0 OS=Cucumis sativus OX=3659 GN=Csa_1G530120 PE=3 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 2.9e-166
Identity = 317/320 (99.06%), Postives = 319/320 (99.69%), Query Frame = 0


Query: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60
           MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240
           LGIRPFSYGLIVVSVY+NGSVFSPAVLDL+EEDLLEKFLAGVSMVASLSLAVSFPTLAAA
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFSPAVLDLSEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPAAVEE 300
           PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFA AAAPAVAAESVAAAPAAVEE
Sbjct: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFAAAAAPAVAAESVAAAPAAVEE 300

Query: 301 KKEEPEEESDEGDMIMGLFD 321
           KKEEPEEESDEGDMIMGLFD
Sbjct: 301 KKEEPEEESDEGDMIMGLFD 320

[Close]

BLAST of CSPI01G23810 vs. ExPASy TrEMBL
Match: A0A1S3C6N6 (60S acidic ribosomal protein P0 OS=Cucumis melo OX=3656 GN=LOC103497088 PE=3 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 5.2e-163
Identity = 311/320 (97.19%), Postives = 315/320 (98.44%), Query Frame = 0


Query: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60
           MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSE TGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240
           LGIRPFSYGLIVVSVY+NGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPAAVEE 300
           PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFA AAAPA AA+SV AAPAA+E+
Sbjct: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFAAAAAPAAAAKSVVAAPAAMED 300

Query: 301 KKEEPEEESDEGDMIMGLFD 321
           KKEEPEEESDE DMIMGLFD
Sbjct: 301 KKEEPEEESDEEDMIMGLFD 320

[Close]

BLAST of CSPI01G23810 vs. ExPASy TrEMBL
Match: A0A5D3BFC6 (60S acidic ribosomal protein P0 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001270 PE=3 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 5.2e-163
Identity = 311/320 (97.19%), Postives = 315/320 (98.44%), Query Frame = 0


Query: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60
           MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSE TGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240
           LGIRPFSYGLIVVSVY+NGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPAAVEE 300
           PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFA AAAPA AA+SV AAPAA+E+
Sbjct: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFAAAAAPAAAAKSVVAAPAAMED 300

Query: 301 KKEEPEEESDEGDMIMGLFD 321
           KKEEPEEESDE DMIMGLFD
Sbjct: 301 KKEEPEEESDEEDMIMGLFD 320

[Close]

BLAST of CSPI01G23810 vs. ExPASy TrEMBL
Match: A0A5A7SNJ3 (60S acidic ribosomal protein P0 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00560 PE=3 SV=1)

HSP 1 Score: 578.9 bits (1491), Expect = 1.3e-161
Identity = 311/321 (96.88%), Postives = 314/321 (97.82%), Query Frame = 0


Query: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60
           MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYK-VGAPARVGLV 120
           MMKRSIRIHSE TGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYK VGAPARVGLV
Sbjct: 61  MMKRSIRIHSEKTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVVGAPARVGLV 120

Query: 121 APIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLS 180
           APIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLS
Sbjct: 121 APIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLS 180

Query: 181 KLGIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAA 240
           KLGIRPFSYGLIVVSVY+NGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAA
Sbjct: 181 KLGIRPFSYGLIVVSVYDNGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAA 240

Query: 241 APHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPAAVE 300
           APHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFA AAAP  AAESV AAPAA+E
Sbjct: 241 APHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFAAAAAPVAAAESVVAAPAAME 300

Query: 301 EKKEEPEEESDEGDMIMGLFD 321
           +KKEEPEEESDE DMIMGLFD
Sbjct: 301 DKKEEPEEESDEEDMIMGLFD 321

[Close]

BLAST of CSPI01G23810 vs. ExPASy TrEMBL
Match: A0A6J1DCV2 (60S acidic ribosomal protein P0 OS=Momordica charantia OX=3673 GN=LOC111018938 PE=3 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 4.2e-149
Identity = 287/324 (88.58%), Postives = 305/324 (94.14%), Query Frame = 0


Query: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60
           MVLKPTRAQKK+ YDQKLCRLL EYSQVLIVGADNVGSNQLQ+IR+GLRGDSI+LMGKNT
Sbjct: 1   MVLKPTRAQKKSQYDQKLCRLLGEYSQVLIVGADNVGSNQLQNIRQGLRGDSIVLMGKNT 60

Query: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSE TGNTAV +L+PHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNTAVMSLVPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240
           LGIRPFSYGL+V+SVY+NGSVFSP VLDLTE+DLLEKFL GVSMVAS+SLA+SFPTLAAA
Sbjct: 181 LGIRPFSYGLLVLSVYDNGSVFSPEVLDLTEDDLLEKFLTGVSMVASVSLALSFPTLAAA 240

Query: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPA---- 300
           PHMLINAYKNALA+AVATEYSF +A+E+KEFLKDPSKFA  AAPA AAES  AAPA    
Sbjct: 241 PHMLINAYKNALAVAVATEYSFPQAEEVKEFLKDPSKFAAVAAPAAAAESGGAAPAAAAP 300

Query: 301 AVEEKKEEPEEESDEGDMIMGLFD 321
           A +E+KEEP EESDE DMIMGLFD
Sbjct: 301 AAKEEKEEPAEESDE-DMIMGLFD 323

[Close]

BLAST of CSPI01G23810 vs. NCBI nr
Match: XP_004145258.1 (60S acidic ribosomal protein P0 [Cucumis sativus] >KGN65800.1 hypothetical protein Csa_023177 [Cucumis sativus])

HSP 1 Score: 594.3 bits (1531), Expect = 6.0e-166
Identity = 317/320 (99.06%), Postives = 319/320 (99.69%), Query Frame = 0


Query: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60
           MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240
           LGIRPFSYGLIVVSVY+NGSVFSPAVLDL+EEDLLEKFLAGVSMVASLSLAVSFPTLAAA
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFSPAVLDLSEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPAAVEE 300
           PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFA AAAPAVAAESVAAAPAAVEE
Sbjct: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFAAAAAPAVAAESVAAAPAAVEE 300

Query: 301 KKEEPEEESDEGDMIMGLFD 321
           KKEEPEEESDEGDMIMGLFD
Sbjct: 301 KKEEPEEESDEGDMIMGLFD 320

[Close]

BLAST of CSPI01G23810 vs. NCBI nr
Match: XP_008457380.1 (PREDICTED: 60S acidic ribosomal protein P0-like [Cucumis melo] >XP_016902088.1 PREDICTED: 60S acidic ribosomal protein P0-like [Cucumis melo] >TYJ97321.1 60S acidic ribosomal protein P0-like [Cucumis melo var. makuwa])

HSP 1 Score: 583.6 bits (1503), Expect = 1.1e-162
Identity = 311/320 (97.19%), Postives = 315/320 (98.44%), Query Frame = 0


Query: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60
           MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSE TGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240
           LGIRPFSYGLIVVSVY+NGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA
Sbjct: 181 LGIRPFSYGLIVVSVYDNGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPAAVEE 300
           PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFA AAAPA AA+SV AAPAA+E+
Sbjct: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFAAAAAPAAAAKSVVAAPAAMED 300

Query: 301 KKEEPEEESDEGDMIMGLFD 321
           KKEEPEEESDE DMIMGLFD
Sbjct: 301 KKEEPEEESDEEDMIMGLFD 320

[Close]

BLAST of CSPI01G23810 vs. NCBI nr
Match: KAA0031813.1 (60S acidic ribosomal protein P0-like [Cucumis melo var. makuwa])

HSP 1 Score: 578.9 bits (1491), Expect = 2.6e-161
Identity = 311/321 (96.88%), Postives = 314/321 (97.82%), Query Frame = 0


Query: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60
           MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT
Sbjct: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60

Query: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYK-VGAPARVGLV 120
           MMKRSIRIHSE TGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYK VGAPARVGLV
Sbjct: 61  MMKRSIRIHSEKTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVVGAPARVGLV 120

Query: 121 APIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLS 180
           APIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLS
Sbjct: 121 APIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLS 180

Query: 181 KLGIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAA 240
           KLGIRPFSYGLIVVSVY+NGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAA
Sbjct: 181 KLGIRPFSYGLIVVSVYDNGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAA 240

Query: 241 APHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPAAVE 300
           APHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFA AAAP  AAESV AAPAA+E
Sbjct: 241 APHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFAAAAAPVAAAESVVAAPAAME 300

Query: 301 EKKEEPEEESDEGDMIMGLFD 321
           +KKEEPEEESDE DMIMGLFD
Sbjct: 301 DKKEEPEEESDEEDMIMGLFD 321

[Close]

BLAST of CSPI01G23810 vs. NCBI nr
Match: XP_038895318.1 (60S acidic ribosomal protein P0-like [Benincasa hispida])

HSP 1 Score: 555.1 bits (1429), Expect = 4.1e-154
Identity = 298/323 (92.26%), Postives = 308/323 (95.36%), Query Frame = 0


Query: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60
           MVLKPTRAQKK  YDQKLCRLL+EYSQVLIVGADNVGSNQLQSIRKGLRGDSI+LMGKNT
Sbjct: 1   MVLKPTRAQKKAQYDQKLCRLLEEYSQVLIVGADNVGSNQLQSIRKGLRGDSIVLMGKNT 60

Query: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSE TGN+AVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNSAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240
           LGIRPFSYGLIV+SVY+NGSVF P VLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA
Sbjct: 181 LGIRPFSYGLIVLSVYDNGSVFDPEVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240

Query: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAES---VAAAPAA 300
           PHMLINAYKNALA+AVAT+YSF +ADEIKE+LKDP+KFA AAAPA  AES    AAAPAA
Sbjct: 241 PHMLINAYKNALAVAVATDYSFPQADEIKEYLKDPNKFAAAAAPAAVAESGGAAAAAPAA 300

Query: 301 VEEKKEEPEEESDEGDMIMGLFD 321
            EEKKEEPEEESDE DMIMGLFD
Sbjct: 301 QEEKKEEPEEESDE-DMIMGLFD 322

[Close]

BLAST of CSPI01G23810 vs. NCBI nr
Match: XP_022150896.1 (60S acidic ribosomal protein P0-like [Momordica charantia])

HSP 1 Score: 537.3 bits (1383), Expect = 8.8e-149
Identity = 287/324 (88.58%), Postives = 305/324 (94.14%), Query Frame = 0


Query: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60
           MVLKPTRAQKK+ YDQKLCRLL EYSQVLIVGADNVGSNQLQ+IR+GLRGDSI+LMGKNT
Sbjct: 1   MVLKPTRAQKKSQYDQKLCRLLGEYSQVLIVGADNVGSNQLQNIRQGLRGDSIVLMGKNT 60

Query: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRSIRIHSE TGNTAV +L+PHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSIRIHSEKTGNTAVMSLVPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180
           PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK
Sbjct: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180

Query: 181 LGIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240
           LGIRPFSYGL+V+SVY+NGSVFSP VLDLTE+DLLEKFL GVSMVAS+SLA+SFPTLAAA
Sbjct: 181 LGIRPFSYGLLVLSVYDNGSVFSPEVLDLTEDDLLEKFLTGVSMVASVSLALSFPTLAAA 240

Query: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPA---- 300
           PHMLINAYKNALA+AVATEYSF +A+E+KEFLKDPSKFA  AAPA AAES  AAPA    
Sbjct: 241 PHMLINAYKNALAVAVATEYSFPQAEEVKEFLKDPSKFAAVAAPAAAAESGGAAPAAAAP 300

Query: 301 AVEEKKEEPEEESDEGDMIMGLFD 321
           A +E+KEEP EESDE DMIMGLFD
Sbjct: 301 AAKEEKEEPAEESDE-DMIMGLFD 323

[Close]

BLAST of CSPI01G23810 vs. TAIR 10
Match: AT3G09200.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 476.1 bits (1224), Expect = 2.2e-134
Identity = 249/320 (77.81%), Postives = 287/320 (89.69%), Query Frame = 0


Query: 2   VLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNTM 61
           ++K T+A+KK  YD KLC+L+DEY+Q+L+V ADNVGS QLQ+IRKGLRGDS++LMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSENTGNTA+ NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSKL 181
           IDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GDKVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAAP 241
           GIRPFSYGL+V SVY+NGSVFSP VLDLTE+ L+EKF +G+SMV SL+LAVS+PTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPAAVE-E 301
           HM INAYKNALAIAVATEY+F +A+++KE+LKDPSKFA A+  AV+A++   APAA + E
Sbjct: 241 HMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPAAAKVE 300

Query: 302 KKEEPEEESDEGDMIMGLFD 321
           +KEE +EE   GD   GLFD
Sbjct: 301 EKEESDEEDYGGD--FGLFD 318

[Close]

BLAST of CSPI01G23810 vs. TAIR 10
Match: AT3G11250.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 471.5 bits (1212), Expect = 5.5e-133
Identity = 251/324 (77.47%), Postives = 287/324 (88.58%), Query Frame = 0


Query: 2   VLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNTM 61
           ++K T+A+KK  YD KLC+L+DEY+Q+L+V ADNVGS QLQ+IRKGLRGDS++LMGKNTM
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60

Query: 62  MKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
           MKRS+RIHSEN+GNTA+ NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSKL 181
           IDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GDKVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAAP 241
           GIRPFSYGL+V SVY+NGSVFSP VLDLTE+ L+EKF +G+SMV SL+LAVS+PTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAE-----SVAAAPA 301
           HM INAYKNALAIAVAT+Y+F +A+++KEFLKDPSKF  AAA AV+A+     + A A A
Sbjct: 241 HMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAA-AVSADAGGGSAQAGAAA 300

Query: 302 AVEEKKEEPEEESDEGDMIMGLFD 321
            VEEKKEE +EE  EG    GLFD
Sbjct: 301 KVEEKKEESDEEDYEGG--FGLFD 321

[Close]

BLAST of CSPI01G23810 vs. TAIR 10
Match: AT2G40010.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 457.2 bits (1175), Expect = 1.1e-128
Identity = 241/319 (75.55%), Postives = 276/319 (86.52%), Query Frame = 0


Query: 1   MVLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNT 60
           M +K T+A+KK  YD KLC+LL+EYSQ+L+V ADNVGS QLQ+IRKGLRGDS++LMGKNT
Sbjct: 1   MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60

Query: 61  MMKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVA 120
           MMKRS+RIH++ TGN A  +LLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVA
Sbjct: 61  MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120

Query: 121 PIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSK 180
           PIDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALL+K
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180

Query: 181 LGIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAA 240
           LGIRPFSYGL+V SVY+NGSVF+P VL+LTE+DL+EKF AGVSM+ +LSLA+S+PT+AAA
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240

Query: 241 PHMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPAAVEE 300
           PHM +NAYKN LA+A+ATEYSF +A+ +KEFLKDP+KFA A A  V+ ES  A  A   E
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVAVE 300

Query: 301 KKEEPEEESDEGDMIMGLF 320
             EE  EESD GDM   LF
Sbjct: 301 --EEAAEESD-GDMGFDLF 316

[Close]

BLAST of CSPI01G23810 vs. TAIR 10
Match: AT3G09200.2 (Ribosomal protein L10 family protein )

HSP 1 Score: 403.3 bits (1035), Expect = 1.8e-112
Identity = 221/320 (69.06%), Postives = 256/320 (80.00%), Query Frame = 0


Query: 2   VLKPTRAQKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNTM 61
           ++K T+A+KK  YD KLC+L+DEY+Q+L+                               
Sbjct: 1   MVKATKAEKKIAYDTKLCQLIDEYTQILV------------------------------- 60

Query: 62  MKRSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAP 121
             RS+RIHSENTGNTA+ NLLP L GNVGLIFTKGDLKEV EEVAKYKVGAPARVGLVAP
Sbjct: 61  --RSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120

Query: 122 IDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSKL 181
           IDV+V PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GDKVGSSEAALL+KL
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKL 180

Query: 182 GIRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMVASLSLAVSFPTLAAAP 241
           GIRPFSYGL+V SVY+NGSVFSP VLDLTE+ L+EKF +G+SMV SL+LAVS+PTLAAAP
Sbjct: 181 GIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAP 240

Query: 242 HMLINAYKNALAIAVATEYSFSEADEIKEFLKDPSKFATAAAPAVAAESVAAAPAAVE-E 301
           HM INAYKNALAIAVATEY+F +A+++KE+LKDPSKFA A+  AV+A++   APAA + E
Sbjct: 241 HMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPAAAKVE 285

Query: 302 KKEEPEEESDEGDMIMGLFD 321
           +KEE +EE   GD   GLFD
Sbjct: 301 EKEESDEEDYGGD--FGLFD 285

[Close]

BLAST of CSPI01G23810 vs. TAIR 10
Match: AT1G25260.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 56.2 bits (134), Expect = 5.5e-08
Identity = 49/223 (21.97%), Postives = 102/223 (45.74%), Query Frame = 0


Query: 10  KKTNYDQKLC------RLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNTMMK 69
           KK   + K C        +++YS V +   +N+ + + +  R+  R +    +G N +M+
Sbjct: 16  KKKGREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQFRHNGKFFLGSNKVMQ 75

Query: 70  RSIRIHSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAPID 129
            ++   +E+   + +  +   L G+ GL+ T    +EV+     Y+    +R G +A   
Sbjct: 76  VALGRSAEDELRSGIYKVSKLLRGDTGLLVTDMPKEEVESLFNAYEDSDFSRTGSIAVET 135

Query: 130 VIVPPGN-TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSKLG 189
           V +  G             + L +P ++NKGTVE++    + ++G ++    A +L  L 
Sbjct: 136 VELKEGPLEQFTHEMEPLLRKLEMPVRLNKGTVELVADFVVCEEGKQLSPKSAHILRLLR 195

Query: 190 IRPFSYGLIVVSVYENGSVFSPAVLDLTEEDLLEKFLAGVSMV 226
           ++  ++ L ++  +      SP+  +L  EDL E +   +S V
Sbjct: 196 MKMATFKLNLLCRW------SPSDFELYREDLSELYREDLSDV 232

The following BLAST results are available for this feature:

BLAST of CSPI01G23810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P50346	6.3e-134	78.50	60S acidic ribosomal protein P0 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q42112	3.1e-133	77.81	60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana OX=3702 GN=RPP0B PE=1 ...	[more]
P41095	9.2e-133	76.71	60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica OX=39947 GN=60SP...	[more]
P57691	7.7e-132	77.47	60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana OX=3702 GN=RPP0C PE=1 ...	[more]
O04204	1.5e-127	75.55	60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana OX=3702 GN=RPP0A PE=1 ...	[more]

BLAST of CSPI01G23810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV50	2.9e-166	99.06	60S acidic ribosomal protein P0 OS=Cucumis sativus OX=3659 GN=Csa_1G530120 PE=3 ...	[more]
A0A1S3C6N6	5.2e-163	97.19	60S acidic ribosomal protein P0 OS=Cucumis melo OX=3656 GN=LOC103497088 PE=3 SV=...	[more]
A0A5D3BFC6	5.2e-163	97.19	60S acidic ribosomal protein P0 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7SNJ3	1.3e-161	96.88	60S acidic ribosomal protein P0 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A6J1DCV2	4.2e-149	88.58	60S acidic ribosomal protein P0 OS=Momordica charantia OX=3673 GN=LOC111018938 P...	[more]

BLAST of CSPI01G23810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145258.1	6.0e-166	99.06	60S acidic ribosomal protein P0 [Cucumis sativus] >KGN65800.1 hypothetical prote...	[more]
XP_008457380.1	1.1e-162	97.19	PREDICTED: 60S acidic ribosomal protein P0-like [Cucumis melo] >XP_016902088.1 P...	[more]
KAA0031813.1	2.6e-161	96.88	60S acidic ribosomal protein P0-like [Cucumis melo var. makuwa]	[more]
XP_038895318.1	4.1e-154	92.26	60S acidic ribosomal protein P0-like [Benincasa hispida]	[more]
XP_022150896.1	8.8e-149	88.58	60S acidic ribosomal protein P0-like [Momordica charantia]	[more]

BLAST of CSPI01G23810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09200.1	2.2e-134	77.81	Ribosomal protein L10 family protein	[more]
AT3G11250.1	5.5e-133	77.47	Ribosomal protein L10 family protein	[more]
AT2G40010.1	1.1e-128	75.55	Ribosomal protein L10 family protein	[more]
AT3G09200.2	1.8e-112	69.06	Ribosomal protein L10 family protein	[more]
AT1G25260.1	5.5e-08	21.97	Ribosomal protein L10 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF00428	Ribosomal_60s	coord: 235..319 e-value: 4.9E-18 score: 65.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..320
None	No IPR available	PANTHER	PTHR45699:SF13	60S ACIDIC RIBOSOMAL PROTEIN P0-LIKE	coord: 1..320
None	No IPR available	PANTHER	PTHR45699	60S ACIDIC RIBOSOMAL PROTEIN P0	coord: 1..320
None	No IPR available	CDD	cd05795	Ribosomal_P0_L10e	coord: 9..185 e-value: 1.59774E-89 score: 263.28
IPR030670	60S acidic ribosomal protein P0	PIRSF	PIRSF039087	L10E	coord: 2..320 e-value: 1.6E-134 score: 445.8
IPR040637	60S ribosomal protein L10P, insertion domain	PFAM	PF17777	RL10P_insert	coord: 114..183 e-value: 8.8E-21 score: 73.7
IPR043164	50S ribosomal protein L10, insertion domain superfamily	GENE3D	3.90.105.20		coord: 114..185 e-value: 1.5E-33 score: 116.3
IPR001790	Ribosomal protein L10P	PFAM	PF00466	Ribosomal_L10	coord: 8..108 e-value: 1.2E-19 score: 70.3
IPR043141	Ribosomal protein L10-like domain superfamily	GENE3D	3.30.70.1730		coord: 6..209 e-value: 1.4E-47 score: 162.9
IPR043141	Ribosomal protein L10-like domain superfamily	SUPERFAMILY	160369	Ribosomal protein L10-like	coord: 9..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G23810.1	CSPI01G23810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0070180	large ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome