CSPI01G23540 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G23540
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	18.5 kDa class I heat shock protein-like
Location	Chr1: 19067955 .. 19068735 (+)
RNA-Seq Expression	CSPI01G23540
Synteny	CSPI01G23540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGCTATAAACTCTCGCCTCTTTCGCTTTCTTTACCAATCAGAAATTCCAAACCACTAATTCTATCAAGATCTTTGTTGAATTCAATCAAAGCGCTTCCAAGTTTCGATTTCAAGTCGCGGATTAAGTTCTTCAAACTAAATCTACGAAGATGTCTATGATTCCAAGCTTTTTCAATGGCCGACGGGGCAGTGTCTTCGATCCATTTGCCACGTTCGACCTCTCAGATCCATTTGATTTTCACTTCCCTTCTTCAATTTCATCTCACTTTCCCGAAATCGCTCAAGAAACTTCAGCTATAGTGAACGCTCATGTAGATTGGAAGGAGACGCCGGAGGCTCATGTTCTGAAAGCCGATCTGCCTGGACTGAAGAAAGAGGAGGTGAAAGTGGAGATTGAAGACGGAAGAGTGATTCAGATTAGCGGCGAAAGGAACGTAGAGAAAGAGGATAAGAACGAGAAATGGCATCGGATAGAACGAAGCAGTGGAAAGTTTCAGAGGAGATTTAGAATGCCGGAGGATGTGAAACCGGAGAAAATTAGGGCATCGATGGAGAACGGAGTTCTTACTGTGATGGTTCCGAAGGCGGATGGGAAGAAAACAGATGTGAAATCCGTTGAGATTTCCGGCTAAACACCGAGTTATCATGTGAAATTGTAACTAATGAATCCATGCAAACTGTCTTTGTGAAATTTGTACAAATTACGTTCGATTAATATGAATAAAAGAAGCCATATTGCATCTTAAAAAGACGATTGATTATCATTATCAAATCCGCAA

mRNA sequence

GTTGCTATAAACTCTCGCCTCTTTCGCTTTCTTTACCAATCAGAAATTCCAAACCACTAATTCTATCAAGATCTTTGTTGAATTCAATCAAAGCGCTTCCAAGTTTCGATTTCAAGTCGCGGATTAAGTTCTTCAAACTAAATCTACGAAGATGTCTATGATTCCAAGCTTTTTCAATGGCCGACGGGGCAGTGTCTTCGATCCATTTGCCACGTTCGACCTCTCAGATCCATTTGATTTTCACTTCCCTTCTTCAATTTCATCTCACTTTCCCGAAATCGCTCAAGAAACTTCAGCTATAGTGAACGCTCATGTAGATTGGAAGGAGACGCCGGAGGCTCATGTTCTGAAAGCCGATCTGCCTGGACTGAAGAAAGAGGAGGTGAAAGTGGAGATTGAAGACGGAAGAGTGATTCAGATTAGCGGCGAAAGGAACGTAGAGAAAGAGGATAAGAACGAGAAATGGCATCGGATAGAACGAAGCAGTGGAAAGTTTCAGAGGAGATTTAGAATGCCGGAGGATGTGAAACCGGAGAAAATTAGGGCATCGATGGAGAACGGAGTTCTTACTGTGATGGTTCCGAAGGCGGATGGGAAGAAAACAGATGTGAAATCCGTTGAGATTTCCGGCTAAACACCGAGTTATCATGTGAAATTGTAACTAATGAATCCATGCAAACTGTCTTTGTGAAATTTGTACAAATTACGTTCGATTAATATGAATAAAAGAAGCCATATTGCATCTTAAAAAGACGATTGATTATCATTATCAAATCCGCAA

Coding sequence (CDS)

ATGTCTATGATTCCAAGCTTTTTCAATGGCCGACGGGGCAGTGTCTTCGATCCATTTGCCACGTTCGACCTCTCAGATCCATTTGATTTTCACTTCCCTTCTTCAATTTCATCTCACTTTCCCGAAATCGCTCAAGAAACTTCAGCTATAGTGAACGCTCATGTAGATTGGAAGGAGACGCCGGAGGCTCATGTTCTGAAAGCCGATCTGCCTGGACTGAAGAAAGAGGAGGTGAAAGTGGAGATTGAAGACGGAAGAGTGATTCAGATTAGCGGCGAAAGGAACGTAGAGAAAGAGGATAAGAACGAGAAATGGCATCGGATAGAACGAAGCAGTGGAAAGTTTCAGAGGAGATTTAGAATGCCGGAGGATGTGAAACCGGAGAAAATTAGGGCATCGATGGAGAACGGAGTTCTTACTGTGATGGTTCCGAAGGCGGATGGGAAGAAAACAGATGTGAAATCCGTTGAGATTTCCGGCTAA

Protein sequence

MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKETPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFRMPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG*

Homology

[Close]

BLAST of CSPI01G23540 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.8e-57
Identity = 113/162 (69.75%), Postives = 138/162 (85.19%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPF-DFHFPSSISS-HFPEIAQETSAIVNAHVDWK 60
           MS+IP+FF GRR +VFDPF + D+ DPF DF FP+++SS  FPE ++E SA V+  VDWK
Sbjct: 1   MSLIPNFFGGRRNNVFDPF-SLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWK 60

Query: 61  ETPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRR 120
           ETPEAHV KAD+PGLKKEEVKV+IED +V+QISGERNVEKEDKN+ WHR+ERSSGKF RR
Sbjct: 61  ETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRR 120

Query: 121 FRMPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           FR+PE+ K E+++ASMENGVLTV VPK + KK DVK++EISG
Sbjct: 121 FRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

[Close]

BLAST of CSPI01G23540 vs. ExPASy Swiss-Prot
Match: P04793 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.0e-55
Identity = 110/161 (68.32%), Postives = 132/161 (81.99%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPF-DFHFPSSISSHFPEIAQETSAIVNAHVDWKE 60
           MS+IPS F GRR +VFDPF + D+ DPF DFHFP+S+S+       E SA VN  VDWKE
Sbjct: 1   MSLIPSIFGGRRSNVFDPF-SLDVWDPFKDFHFPTSLSA-------ENSAFVNTRVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV +AD+PGLKKEEVKV+IED RV+QISGERN+EKEDKN+ WHR+ERSSG F RRF
Sbjct: 61  TPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRF 120

Query: 121 RMPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           R+PE+ K E+++ASMENGVLTV VPK + KK DVK++EISG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153

[Close]

BLAST of CSPI01G23540 vs. ExPASy Swiss-Prot
Match: P02519 (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 8.6e-55
Identity = 111/161 (68.94%), Postives = 133/161 (82.61%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPF-DFHFPSSISSHFPEIAQETSAIVNAHVDWKE 60
           MS+IPSFF GRR SVFDPF + D+ DPF DF FPSS+S+       E SA V+  VDWKE
Sbjct: 1   MSLIPSFFGGRRSSVFDPF-SLDVWDPFKDFPFPSSLSA-------ENSAFVSTRVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV KAD+PGLKKEEVK+EI+DGRV+QISGERNVEKEDKN+ WHR+ERSSGK  RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRF 120

Query: 121 RMPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           R+PE+ K ++++ASMENGVLTV VPK + KK DVK+++ISG
Sbjct: 121 RLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153

[Close]

BLAST of CSPI01G23540 vs. ExPASy Swiss-Prot
Match: P04794 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.5e-54
Identity = 109/161 (67.70%), Postives = 130/161 (80.75%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPF-DFHFPSSISSHFPEIAQETSAIVNAHVDWKE 60
           MS+IP FF GRR +VFDPF + D+ DPF DFH P+S       ++ E SA V+  VDWKE
Sbjct: 1   MSLIPGFFGGRRSNVFDPF-SLDMWDPFKDFHVPTS------SVSAENSAFVSTRVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV KAD+PGLKKEEVKV+IED RV+QISGERNVEKEDKN+ WHR+ERSSGKF RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRF 120

Query: 121 RMPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           R+PE+ K  +++ASMENGVLTV VPK + KK DVK++EISG
Sbjct: 121 RLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154

[Close]

BLAST of CSPI01G23540 vs. ExPASy Swiss-Prot
Match: P19243 (18.1 kDa class I heat shock protein OS=Pisum sativum OX=3888 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.2e-53
Identity = 109/160 (68.12%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MS+IPSFF+GRR +VFDPF + D+ DP    FP S SS      +E  A V+  VDWKET
Sbjct: 1   MSLIPSFFSGRRSNVFDPF-SLDVWDPLK-DFPFSNSSPSASFPRENPAFVSTRVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHV KADLPGLKKEEVKVE+ED RV+QISGER+VEKEDKN++WHR+ERSSGKF RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           +PE+ K +K++ASMENGVLTV VPK + KK +VKS+EISG
Sbjct: 121 LPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158

[Close]

BLAST of CSPI01G23540 vs. ExPASy TrEMBL
Match: A0A0A0M0N2 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G527875 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.7e-83
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET
Sbjct: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG
Sbjct: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 160

[Close]

BLAST of CSPI01G23540 vs. ExPASy TrEMBL
Match: A0A5D3BEA2 (18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001640 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.2e-77
Identity = 150/160 (93.75%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFFNGR+ SVFDPFATFDLSDPFDFHFPSSISSHFPEIA+ETSAIVNA VDWKET
Sbjct: 1   MSMIPSFFNGRQSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDG+VIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           MPED K E+IRASMENGVLTV VPKA+GKKTDVKSVEISG
Sbjct: 121 MPEDAKTEEIRASMENGVLTVTVPKAEGKKTDVKSVEISG 160

[Close]

BLAST of CSPI01G23540 vs. ExPASy TrEMBL
Match: A0A1S3C6S1 (18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497111 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.2e-77
Identity = 150/160 (93.75%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFFNGR+ SVFDPFATFDLSDPFDFHFPSSISSHFPEIA+ETSAIVNA VDWKET
Sbjct: 1   MSMIPSFFNGRQSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDG+VIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           MPED K E+IRASMENGVLTV VPKA+GKKTDVKSVEISG
Sbjct: 121 MPEDAKTEEIRASMENGVLTVTVPKAEGKKTDVKSVEISG 160

[Close]

BLAST of CSPI01G23540 vs. ExPASy TrEMBL
Match: A0A5D3BFY1 (18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001650 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.3e-74
Identity = 146/160 (91.25%), Postives = 153/160 (95.62%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFF GRR SVFDPFATFDLSDPFDFHFPSSISSHFPEIA+ETSAIVNA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDG+VIQISGER+VEKEDKNEKWHR+ERSSGKF+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           MPEDVK E+IRASMENGVLTV VPKA+ KK DVKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVPKAEEKKADVKSVEISG 160

[Close]

BLAST of CSPI01G23540 vs. ExPASy TrEMBL
Match: A0A1S3C522 (18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497112 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.3e-74
Identity = 146/160 (91.25%), Postives = 153/160 (95.62%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFF GRR SVFDPFATFDLSDPFDFHFPSSISSHFPEIA+ETSAIVNA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDG+VIQISGER+VEKEDKNEKWHR+ERSSGKF+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           MPEDVK E+IRASMENGVLTV VPKA+ KK DVKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVPKAEEKKADVKSVEISG 160

[Close]

BLAST of CSPI01G23540 vs. NCBI nr
Match: XP_004145268.1 (17.3 kDa class I heat shock protein [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 5.5e-83
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET
Sbjct: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG
Sbjct: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 160

[Close]

BLAST of CSPI01G23540 vs. NCBI nr
Match: XP_008457419.1 (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031778.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYJ97354.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 298.1 bits (762), Expect = 4.5e-77
Identity = 150/160 (93.75%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFFNGR+ SVFDPFATFDLSDPFDFHFPSSISSHFPEIA+ETSAIVNA VDWKET
Sbjct: 1   MSMIPSFFNGRQSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDG+VIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           MPED K E+IRASMENGVLTV VPKA+GKKTDVKSVEISG
Sbjct: 121 MPEDAKTEEIRASMENGVLTVTVPKAEGKKTDVKSVEISG 160

[Close]

BLAST of CSPI01G23540 vs. NCBI nr
Match: XP_008457420.1 (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031777.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYJ97355.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 288.9 bits (738), Expect = 2.7e-74
Identity = 146/160 (91.25%), Postives = 153/160 (95.62%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFF GRR SVFDPFATFDLSDPFDFHFPSSISSHFPEIA+ETSAIVNA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDG+VIQISGER+VEKEDKNEKWHR+ERSSGKF+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           MPEDVK E+IRASMENGVLTV VPKA+ KK DVKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVPKAEEKKADVKSVEISG 160

[Close]

BLAST of CSPI01G23540 vs. NCBI nr
Match: XP_038894963.1 (18.5 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 288.1 bits (736), Expect = 4.6e-74
Identity = 146/160 (91.25%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFF GRR SVFDPFATFDLSDPFDFHFPSSISSHFPEIA+ETSA+VNA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDG+VIQISGER+VEKEDKNE WHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNETWHRIERSSGKFQRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           MPED K E+IRASMENGVLTV VPKA+GKKT VKSVEISG
Sbjct: 121 MPEDAKMEEIRASMENGVLTVTVPKAEGKKTVVKSVEISG 160

[Close]

BLAST of CSPI01G23540 vs. NCBI nr
Match: ADU55790.1 (HSP18.2A [Citrullus lanatus])

HSP 1 Score: 287.7 bits (735), Expect = 6.1e-74
Identity = 143/160 (89.38%), Postives = 153/160 (95.62%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MSMIPSFF GRR SVFDPFATFDLSDPFDFHFPSSISSHFPEIA+ETSA+VNA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVE+EDG+VIQISGER++EKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           +PED K E+IRASMENGVLTV VPKA+ KKTDVK+VEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEQKKTDVKTVEISG 160

[Close]

BLAST of CSPI01G23540 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 204.5 bits (519), Expect = 6.3e-53
Identity = 103/160 (64.38%), Postives = 127/160 (79.38%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MS+IPS F GRR +VFDPF+  DL DPF+  F  S +      A++ +A  NA VDWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQ-DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHV KADLPGLKKEEVKVE+ED  V+QISGER+ E E+KN+KWHR+ER+SGKF RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           +PE+ K E+++A+MENGVLTV+VPKA  KK  VKS++ISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CSPI01G23540 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 204.1 bits (518), Expect = 8.2e-53
Identity = 108/161 (67.08%), Postives = 132/161 (81.99%), Query Frame = 0


Query: 1   MSMIPSFF-NGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKE 60
           MSMIPSFF N RR ++FDPF + D+ DPF     SS+S       +E SAIVNA VDW+E
Sbjct: 1   MSMIPSFFNNNRRSNIFDPF-SLDVWDPFKELTSSSLS-------RENSAIVNARVDWRE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV KADLPGLKKEEVKVEIE+  V++ISGER+VEKEDKN+ WHR+ERSSG+F RRF
Sbjct: 61  TPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRF 120

Query: 121 RMPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           R+PE+VK ++++A+MENGVLTV VPKA+ KK DVKS++ISG
Sbjct: 121 RLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of CSPI01G23540 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 198.4 bits (503), Expect = 4.5e-51
Identity = 102/161 (63.35%), Postives = 129/161 (80.12%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFD-FHFPSSISSHFPEIAQETSAIVNAHVDWKE 60
           MS+IPS F GRR +VFDPF + D+ DPF+ F  PS +++     A + +A  NA VDW+E
Sbjct: 1   MSLIPSIFGGRRTNVFDPF-SLDVFDPFEGFLTPSGLAN---APAMDVAAFTNAKVDWRE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV KADLPGL+KEEVKVE+EDG ++QISGER+ E E+KN+KWHR+ERSSGKF RRF
Sbjct: 61  TPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRF 120

Query: 121 RMPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           R+PE+ K E+I+ASMENGVL+V VPK   KK +VKS++ISG
Sbjct: 121 RLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of CSPI01G23540 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 193.0 bits (489), Expect = 1.9e-49
Identity = 96/160 (60.00%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 1   MSMIPSFFNGRRGSVFDPFATFDLSDPFDFHFPSSISSHFPEIAQETSAIVNAHVDWKET 60
           MS++PSFF GRR +VFDPF + D+ DPF+      +++     A++ +A  NA VDW+ET
Sbjct: 1   MSLVPSFFGGRRTNVFDPF-SLDVWDPFEGFLTPGLTN---APAKDVAAFTNAKVDWRET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHV KAD+PGLKKEEVKVE+EDG ++QISGER+ E E+K++ WHR+ERSSGKF RRFR
Sbjct: 61  PEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFR 120

Query: 121 MPEDVKPEKIRASMENGVLTVMVPKADGKKTDVKSVEISG 161
           +PE+ K E+++ASMENGVL+V VPK    K +VKSV+ISG
Sbjct: 121 LPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of CSPI01G23540 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 191.0 bits (484), Expect = 7.2e-49
Identity = 104/165 (63.03%), Postives = 129/165 (78.18%), Query Frame = 0


Query: 1   MSMIPSFF--NGRRGSVFDPFATFDLSDPF-DFHFPSSISSHFPEIAQETSAIVNAHVDW 60
           MS+IPSFF  N R  S+FDPF + D+ DPF +  FPSS+S        ETSAI NA VDW
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPF-SLDVWDPFKELQFPSSLSG-------ETSAITNARVDW 60

Query: 61  KETPEAHVLKADLPGLKKEEVKVEIEDGRVIQISGERNVEKEDKNEKWHRIERSSGKFQR 120
           KET EAHV KADLPG+KKEEVKVEIED  V++ISGER+VEKE+K + WHR+ERSSG+F R
Sbjct: 61  KETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSR 120

Query: 121 RFRMPEDVKPEKIRASMENGVLTVMVPKAD--GKKTDVKSVEISG 161
           +F++PE+VK ++++ASMENGVLTV VPK +   KK  VKS++ISG
Sbjct: 121 KFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of CSPI01G23540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05478	1.8e-57	69.75	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]
P04793	5.0e-55	68.32	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=...	[more]
P02519	8.6e-55	68.94	17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=...	[more]
P04794	2.5e-54	67.70	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=...	[more]
P19243	1.2e-53	68.13	18.1 kDa class I heat shock protein OS=Pisum sativum OX=3888 GN=HSP18.1 PE=1 SV=...	[more]

BLAST of CSPI01G23540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0N2	2.7e-83	100.00	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G527875 PE=3 S...	[more]
A0A5D3BEA2	2.2e-77	93.75	18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C6S1	2.2e-77	93.75	18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497111...	[more]
A0A5D3BFY1	1.3e-74	91.25	18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C522	1.3e-74	91.25	18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497112...	[more]

BLAST of CSPI01G23540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145268.1	5.5e-83	100.00	17.3 kDa class I heat shock protein [Cucumis sativus]	[more]
XP_008457419.1	4.5e-77	93.75	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031778.1...	[more]
XP_008457420.1	2.7e-74	91.25	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031777.1...	[more]
XP_038894963.1	4.6e-74	91.25	18.5 kDa class I heat shock protein-like [Benincasa hispida]	[more]
ADU55790.1	6.1e-74	89.38	HSP18.2A [Citrullus lanatus]	[more]

BLAST of CSPI01G23540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	6.3e-53	64.38	heat shock protein 18.2	[more]
AT2G29500.1	8.2e-53	67.08	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	4.5e-51	63.35	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.9e-49	60.00	heat shock protein 17.4	[more]
AT1G07400.1	7.2e-49	63.03	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 9..160 e-value: 1.4E-48 score: 166.4
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 26..160
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 56..159 e-value: 2.5E-29 score: 101.4
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 46..160 score: 30.351732
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..160
None	No IPR available	PANTHER	PTHR11527:SF319	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..160
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 54..145 e-value: 1.71432E-51 score: 157.467

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G23540.1	CSPI01G23540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009903	chloroplast avoidance movement
biological_process	GO:0031022	nuclear migration along microfilament
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009637	response to blue light
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding