CSPI01G23360 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G23360
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr1: 18960623 .. 18963131 (+)
RNA-Seq Expression	CSPI01G23360
Synteny	CSPI01G23360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCATCATGAAATTGAAATCTTGAGATTTTGATTTTTAATAAGGTCAGAGTGTGGAGAGAGCGTCATCTCAATCACTCTCAGATATTTCACTGATTCATCCTTCAAAAATCACACAGCTTCTACTCAAATTCGCTCATGGGATGATTTGAACATAATTCACTTGAATCCTTCTGTCATGTGGGCGCTTCGTACTCCCCATTCTACCCATTACCCACCTTCCTCTCCCCGCCATTCCACTTCAAAACTCTCCGTTTCCTCCTTCTCCTTCAATCCTTCAACCCCCCCAAATTCAAATAATAATCACTTGATTCAATCTCTGTGTAAACAGGGCAATCTCAAACAAGCCCTTTACCTCCTCTCCCATGAATCCAATCCTACCCAGCAAACCTGCGAGCTTCTAATCCTCTCCGCCGCTCGCCGGAACTCTCTTTCCGATGCCCTTGACGTCCATCAGCTTCTCGTCGATGGGGGTTTTGACCAAGACCCTTTTTTGGCCACCAAGCTTATCAATATGTTTTCCGAATTGGGCACTGTCGACAATGCGCGCAAGGTGTTTGACAAAACGCGTAAGAGAACTATATATGTTTGGAATGCGTTGTTTAGAGCTCTTGCGTTGGCGGGTCGTGGAAACGACGTATTGGAATTGTATCCCCGGATGAATATGATGGGAGTTTCTTCTGATAGGTTTACTTATACTTATTTGCTCAAAGCTTGTGTTGCTTCAGAGTGTTTGGTTTCGTTTCTCCAGAAGGGTAAAGAGATTCATGCGCATATTTTGAGACATGGGTATGGAGCTCATGTTCATGTTATGACTACTCTGATGGATATGTACGCAAGGTTTGGGTGTGTTTCTTATGCCAGTGCAGTGTTTGATGAAATGCCTGTGAAAAATGTGGTTTCTTGGAGTGCTATGATTGCATGCTATGCAAAGAATGGGAAGCCATACGAAGCTTTGGAACTCTTTCGTGAGATGATGCTCAATACCCACGATTCAGTGCCGAATTCTGTGACGATGGTCAGTGTACTCCAAGCTTGTGCTGCTTTTGCTGCTTTGGAGCAAGGGAAGCTTATCCACGCTTACATTCTTAGGAGGGGTCTGGATTCAATCTTGCCAGTTATAAGTGCTCTTATAACCATGTATGCAAGATGTGGTAAGCTTGAGTCAGGCCAACTAATTTTTGACCGTATGCATAAGAAAGATGTTGTCTTATGGAATTCATTGATTTCGAGTTATGGACTGCATGGATATGGAAGAAAAGCAATCAAAATTTTTGAAGAGATGATTGACCATGGATTCTCACCTAGTCACATATCATTTATAAGTGTTTTGGGTGCTTGCAGCCATACTGGGCTTGTTGAAGAGGGGAAGAAGTTGTTTGAATCCATGGTAAAAGAACATGGTATACAGCCTAGTGTAGAGCACTATGCTTGTATGGTTGATCTTCTTGGCCGTGCCAACCGGTTGGATGAAGCAGCCAAGATTATAGAAGATCTGCGTATCGAACCAGGGCCCAAAGTATGGGGTTCTCTTCTTGGTGCCTGTAGGATTCATTGCCATGTTGAGCTTGCTGAACGAGCAAGCAAACGGCTTTTCAAGCTTGAGCCTACAAATGCTGGGAATTATGTACTTCTGGCTGATATTTATGCAGAAGCTGAAATGTGGGATGAGGTAAAGAGAGTGAAAAAACTTCTTGATTCTCGTGAATTACAAAAGGTCCCTGGTAGAAGTTGGATTGAAGTACGAAGGAAAATCTATTCATTTACATCTGTTGATGAGTTCAACCCACAGGGAGAGCAACTTCATGCCCTGTTAGTGAATTTGTCAAATGAGATGAAGCAAAGAGGATATACCCCACAAACAAAACTGGTTCTGTATGACCTTGATCAGGAAGAAAAGGAAAGGATTGTGTTGGGTCATAGCGAAAAACTCGCAGTTGCTTTTGGACTAATCAATACAAGCAAGGGGGACACCATAAGAATAACTAAGAACTTGAGGCTATGTGAAGACTGCCATTCCGTCACAAAATTCATTTCCAAGTTTGCCGATCGAGAGATTATGGTTCGAGATTTGAATCGTTTCCACCATTTCAAAGATGGAGTTTGCTCTTGTGGAGATTATTGGTAGTTTCTATACAAATCCTTATCTTGTTCCTTTTATTTTTCTAATACCTCTATGATAATAACAAGTGATCCAACGATTCTATTGGGCAGCTCAGCTACATAGTTGAACACTTCCACACACCTTGAAACTTGTTTTCTTTAGGCCTATAATTTTATTCAAATGTCTTCTAGAGAAAATGAGAAAGAAGAGGCGTCTATTGACGTCAAATTGAAAATTCCCTTCTGCTCTTATATGGGGGAAGATCAAAGCTAAGCTCCATTAAGGTATGACTTATTTAAGGTGTCCCAGTGTGGTAATTTAAAGCATCAAATAGCTTTTTAGTTGAATATTGAACTAAACCAAAAAGTCATTGTTCGACTCCTACGAATAGGAACGATCTTGTAATT

mRNA sequence

ATCATCATGAAATTGAAATCTTGAGATTTTGATTTTTAATAAGGTCAGAGTGTGGAGAGAGCGTCATCTCAATCACTCTCAGATATTTCACTGATTCATCCTTCAAAAATCACACAGCTTCTACTCAAATTCGCTCATGGGATGATTTGAACATAATTCACTTGAATCCTTCTGTCATGTGGGCGCTTCGTACTCCCCATTCTACCCATTACCCACCTTCCTCTCCCCGCCATTCCACTTCAAAACTCTCCGTTTCCTCCTTCTCCTTCAATCCTTCAACCCCCCCAAATTCAAATAATAATCACTTGATTCAATCTCTGTGTAAACAGGGCAATCTCAAACAAGCCCTTTACCTCCTCTCCCATGAATCCAATCCTACCCAGCAAACCTGCGAGCTTCTAATCCTCTCCGCCGCTCGCCGGAACTCTCTTTCCGATGCCCTTGACGTCCATCAGCTTCTCGTCGATGGGGGTTTTGACCAAGACCCTTTTTTGGCCACCAAGCTTATCAATATGTTTTCCGAATTGGGCACTGTCGACAATGCGCGCAAGGTGTTTGACAAAACGCGTAAGAGAACTATATATGTTTGGAATGCGTTGTTTAGAGCTCTTGCGTTGGCGGGTCGTGGAAACGACGTATTGGAATTGTATCCCCGGATGAATATGATGGGAGTTTCTTCTGATAGGTTTACTTATACTTATTTGCTCAAAGCTTGTGTTGCTTCAGAGTGTTTGGTTTCGTTTCTCCAGAAGGGTAAAGAGATTCATGCGCATATTTTGAGACATGGGTATGGAGCTCATGTTCATGTTATGACTACTCTGATGGATATGTACGCAAGGTTTGGGTGTGTTTCTTATGCCAGTGCAGTGTTTGATGAAATGCCTGTGAAAAATGTGGTTTCTTGGAGTGCTATGATTGCATGCTATGCAAAGAATGGGAAGCCATACGAAGCTTTGGAACTCTTTCGTGAGATGATGCTCAATACCCACGATTCAGTGCCGAATTCTGTGACGATGGTCAGTGTACTCCAAGCTTGTGCTGCTTTTGCTGCTTTGGAGCAAGGGAAGCTTATCCACGCTTACATTCTTAGGAGGGGTCTGGATTCAATCTTGCCAGTTATAAGTGCTCTTATAACCATGTATGCAAGATGTGGTAAGCTTGAGTCAGGCCAACTAATTTTTGACCGTATGCATAAGAAAGATGTTGTCTTATGGAATTCATTGATTTCGAGTTATGGACTGCATGGATATGGAAGAAAAGCAATCAAAATTTTTGAAGAGATGATTGACCATGGATTCTCACCTAGTCACATATCATTTATAAGTGTTTTGGGTGCTTGCAGCCATACTGGGCTTGTTGAAGAGGGGAAGAAGTTGTTTGAATCCATGGTAAAAGAACATGGTATACAGCCTAGTGTAGAGCACTATGCTTGTATGGTTGATCTTCTTGGCCGTGCCAACCGGTTGGATGAAGCAGCCAAGATTATAGAAGATCTGCGTATCGAACCAGGGCCCAAAGTATGGGGTTCTCTTCTTGGTGCCTGTAGGATTCATTGCCATGTTGAGCTTGCTGAACGAGCAAGCAAACGGCTTTTCAAGCTTGAGCCTACAAATGCTGGGAATTATGTACTTCTGGCTGATATTTATGCAGAAGCTGAAATGTGGGATGAGGTAAAGAGAGTGAAAAAACTTCTTGATTCTCGTGAATTACAAAAGGTCCCTGGTAGAAGTTGGATTGAAGTACGAAGGAAAATCTATTCATTTACATCTGTTGATGAGTTCAACCCACAGGGAGAGCAACTTCATGCCCTGTTAGTGAATTTGTCAAATGAGATGAAGCAAAGAGGATATACCCCACAAACAAAACTGGTTCTGTATGACCTTGATCAGGAAGAAAAGGAAAGGATTGTGTTGGGTCATAGCGAAAAACTCGCAGTTGCTTTTGGACTAATCAATACAAGCAAGGGGGACACCATAAGAATAACTAAGAACTTGAGGCTATGTGAAGACTGCCATTCCGTCACAAAATTCATTTCCAAGTTTGCCGATCGAGAGATTATGGTTCGAGATTTGAATCGTTTCCACCATTTCAAAGATGGAGTTTGCTCTTGTGGAGATTATTGGTAGTTTCTATACAAATCCTTATCTTGTTCCTTTTATTTTTCTAATACCTCTATGATAATAACAAGTGATCCAACGATTCTATTGGGCAGCTCAGCTACATAGTTGAACACTTCCACACACCTTGAAACTTGTTTTCTTTAGGCCTATAATTTTATTCAAATGTCTTCTAGAGAAAATGAGAAAGAAGAGGCGTCTATTGACGTCAAATTGAAAATTCCCTTCTGCTCTTATATGGGGGAAGATCAAAGCTAAGCTCCATTAAGGTATGACTTATTTAAGGTGTCCCAGTGTGGTAATTTAAAGCATCAAATAGCTTTTTAGTTGAATATTGAACTAAACCAAAAAGTCATTGTTCGACTCCTACGAATAGGAACGATCTTGTAATT

Coding sequence (CDS)

ATGTGGGCGCTTCGTACTCCCCATTCTACCCATTACCCACCTTCCTCTCCCCGCCATTCCACTTCAAAACTCTCCGTTTCCTCCTTCTCCTTCAATCCTTCAACCCCCCCAAATTCAAATAATAATCACTTGATTCAATCTCTGTGTAAACAGGGCAATCTCAAACAAGCCCTTTACCTCCTCTCCCATGAATCCAATCCTACCCAGCAAACCTGCGAGCTTCTAATCCTCTCCGCCGCTCGCCGGAACTCTCTTTCCGATGCCCTTGACGTCCATCAGCTTCTCGTCGATGGGGGTTTTGACCAAGACCCTTTTTTGGCCACCAAGCTTATCAATATGTTTTCCGAATTGGGCACTGTCGACAATGCGCGCAAGGTGTTTGACAAAACGCGTAAGAGAACTATATATGTTTGGAATGCGTTGTTTAGAGCTCTTGCGTTGGCGGGTCGTGGAAACGACGTATTGGAATTGTATCCCCGGATGAATATGATGGGAGTTTCTTCTGATAGGTTTACTTATACTTATTTGCTCAAAGCTTGTGTTGCTTCAGAGTGTTTGGTTTCGTTTCTCCAGAAGGGTAAAGAGATTCATGCGCATATTTTGAGACATGGGTATGGAGCTCATGTTCATGTTATGACTACTCTGATGGATATGTACGCAAGGTTTGGGTGTGTTTCTTATGCCAGTGCAGTGTTTGATGAAATGCCTGTGAAAAATGTGGTTTCTTGGAGTGCTATGATTGCATGCTATGCAAAGAATGGGAAGCCATACGAAGCTTTGGAACTCTTTCGTGAGATGATGCTCAATACCCACGATTCAGTGCCGAATTCTGTGACGATGGTCAGTGTACTCCAAGCTTGTGCTGCTTTTGCTGCTTTGGAGCAAGGGAAGCTTATCCACGCTTACATTCTTAGGAGGGGTCTGGATTCAATCTTGCCAGTTATAAGTGCTCTTATAACCATGTATGCAAGATGTGGTAAGCTTGAGTCAGGCCAACTAATTTTTGACCGTATGCATAAGAAAGATGTTGTCTTATGGAATTCATTGATTTCGAGTTATGGACTGCATGGATATGGAAGAAAAGCAATCAAAATTTTTGAAGAGATGATTGACCATGGATTCTCACCTAGTCACATATCATTTATAAGTGTTTTGGGTGCTTGCAGCCATACTGGGCTTGTTGAAGAGGGGAAGAAGTTGTTTGAATCCATGGTAAAAGAACATGGTATACAGCCTAGTGTAGAGCACTATGCTTGTATGGTTGATCTTCTTGGCCGTGCCAACCGGTTGGATGAAGCAGCCAAGATTATAGAAGATCTGCGTATCGAACCAGGGCCCAAAGTATGGGGTTCTCTTCTTGGTGCCTGTAGGATTCATTGCCATGTTGAGCTTGCTGAACGAGCAAGCAAACGGCTTTTCAAGCTTGAGCCTACAAATGCTGGGAATTATGTACTTCTGGCTGATATTTATGCAGAAGCTGAAATGTGGGATGAGGTAAAGAGAGTGAAAAAACTTCTTGATTCTCGTGAATTACAAAAGGTCCCTGGTAGAAGTTGGATTGAAGTACGAAGGAAAATCTATTCATTTACATCTGTTGATGAGTTCAACCCACAGGGAGAGCAACTTCATGCCCTGTTAGTGAATTTGTCAAATGAGATGAAGCAAAGAGGATATACCCCACAAACAAAACTGGTTCTGTATGACCTTGATCAGGAAGAAAAGGAAAGGATTGTGTTGGGTCATAGCGAAAAACTCGCAGTTGCTTTTGGACTAATCAATACAAGCAAGGGGGACACCATAAGAATAACTAAGAACTTGAGGCTATGTGAAGACTGCCATTCCGTCACAAAATTCATTTCCAAGTTTGCCGATCGAGAGATTATGGTTCGAGATTTGAATCGTTTCCACCATTTCAAAGATGGAGTTTGCTCTTGTGGAGATTATTGGTAG

Protein sequence

MWALRTPHSTHYPPSSPRHSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELGTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW*

Homology

[Close]

BLAST of CSPI01G23360 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 973.8 bits (2516), Expect = 9.7e-283
Identity = 473/645 (73.33%), Postives = 554/645 (85.89%), Query Frame = 0


Query: 6   TPHSTHYPPSSP-RHSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHE 65
           T H+ ++ P SP +  +  +++++ S +       +NN LIQSLCK+G LKQA+ +LS E
Sbjct: 13  TYHTVNFLPRSPLKPPSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQE 72

Query: 66  SNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELGTVDNAR 125
           S+P+QQT ELLIL    R+SLSDAL VH+ ++D G DQDPFLATKLI M+S+LG+VD AR
Sbjct: 73  SSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYAR 132

Query: 126 KVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASE 185
           KVFDKTRKRTIYVWNALFRAL LAG G +VL LY +MN +GV SDRFTYTY+LKACVASE
Sbjct: 133 KVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASE 192

Query: 186 CLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWS 245
           C V+ L KGKEIHAH+ R GY +HV++MTTL+DMYARFGCV YAS VF  MPV+NVVSWS
Sbjct: 193 CTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWS 252

Query: 246 AMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYIL 305
           AMIACYAKNGK +EAL  FREMM  T DS PNSVTMVSVLQACA+ AALEQGKLIH YIL
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 312

Query: 306 RRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIK 365
           RRGLDSILPVISAL+TMY RCGKLE GQ +FDRMH +DVV WNSLISSYG+HGYG+KAI+
Sbjct: 313 RRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQ 372

Query: 366 IFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLL 425
           IFEEM+ +G SP+ ++F+SVLGACSH GLVEEGK+LFE+M ++HGI+P +EHYACMVDLL
Sbjct: 373 IFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLL 432

Query: 426 GRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYV 485
           GRANRLDEAAK+++D+R EPGPKVWGSLLG+CRIH +VELAERAS+RLF LEP NAGNYV
Sbjct: 433 GRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYV 492

Query: 486 LLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHA 545
           LLADIYAEA+MWDEVKRVKKLL+ R LQK+PGR W+EVRRK+YSF SVDEFNP  EQ+HA
Sbjct: 493 LLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHA 552

Query: 546 LLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITK 605
            LV L+ +MK++GY PQTK VLY+L+ EEKERIVLGHSEKLA+AFGLINTSKG+ IRITK
Sbjct: 553 FLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITK 612

Query: 606 NLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
           NLRLCEDCH  TKFISKF ++EI+VRD+NRFH FK+GVCSCGDYW
Sbjct: 613 NLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657

[Close]

BLAST of CSPI01G23360 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 6.2e-136
Identity = 236/559 (42.22%), Postives = 351/559 (62.79%), Query Frame = 0


Query: 91  VHQLLVDGGFDQDPFLATKLINMFSELGTVDNARKVFDKTRKRTIYVWNALFRALALAGR 150
           VH + V   F ++      L++M+S+ G +D+A+ VF +   R++  + ++    A  G 
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377

Query: 151 GNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVH 210
             + ++L+  M   G+S D +T T +L  C         L +GK +H  I  +  G  + 
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR----YRLLDEGKRVHEWIKENDLGFDIF 437

Query: 211 VMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNT 270
           V   LMDMYA+ G +  A  VF EM VK+++SW+ +I  Y+KN    EAL LF  ++L  
Sbjct: 438 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEE 497

Query: 271 HDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLES 330
               P+  T+  VL ACA+ +A ++G+ IH YI+R G  S   V ++L+ MYA+CG L  
Sbjct: 498 KRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLL 557

Query: 331 GQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSH 390
             ++FD +  KD+V W  +I+ YG+HG+G++AI +F +M   G     ISF+S+L ACSH
Sbjct: 558 AHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSH 617

Query: 391 TGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWG 450
           +GLV+EG + F  M  E  I+P+VEHYAC+VD+L R   L +A + IE++ I P   +WG
Sbjct: 618 SGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWG 677

Query: 451 SLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRE 510
           +LL  CRIH  V+LAE+ ++++F+LEP N G YVL+A+IYAEAE W++VKR++K +  R 
Sbjct: 678 ALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRG 737

Query: 511 LQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLD 570
           L+K PG SWIE++ ++  F + D  NP+ E + A L  +   M + GY+P TK  L D +
Sbjct: 738 LRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAE 797

Query: 571 QEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVR 630
           + EKE  + GHSEKLA+A G+I++  G  IR+TKNLR+C DCH + KF+SK   REI++R
Sbjct: 798 EMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLR 857

Query: 631 DLNRFHHFKDGVCSCGDYW 650
           D NRFH FKDG CSC  +W
Sbjct: 858 DSNRFHQFKDGHCSCRGFW 871

[Close]

BLAST of CSPI01G23360 vs. ExPASy Swiss-Prot
Match: O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 479.9 bits (1234), Expect = 4.4e-134
Identity = 237/609 (38.92%), Postives = 378/609 (62.07%), Query Frame = 0


Query: 42  NHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFD 101
           N +I   C+ GN K+AL L +        T   L+ +       +  + +H   +  G +
Sbjct: 220 NAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE 279

Query: 102 QDPFLATKLINMFSELGTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRM 161
            + F++ KLI++++E G + + +KVFD+   R +  WN++ +A  L  +    + L+  M
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339

Query: 162 NMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAH-VHVMTTLMDMYA 221
            +  +  D  T   L  A + S+  +  ++  + +    LR G+    + +   ++ MYA
Sbjct: 340 RLSRIQPDCLTLISL--ASILSQ--LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 399

Query: 222 RFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTM 281
           + G V  A AVF+ +P  +V+SW+ +I+ YA+NG   EA+E++  +M    +   N  T 
Sbjct: 400 KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY-NIMEEEGEIAANQGTW 459

Query: 282 VSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHK 341
           VSVL AC+   AL QG  +H  +L+ GL   + V+++L  MY +CG+LE    +F ++ +
Sbjct: 460 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 519

Query: 342 KDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKL 401
            + V WN+LI+ +G HG+G KA+ +F+EM+D G  P HI+F+++L ACSH+GLV+EG+  
Sbjct: 520 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 579

Query: 402 FESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHC 461
           FE M  ++GI PS++HY CMVD+ GRA +L+ A K I+ + ++P   +WG+LL ACR+H 
Sbjct: 580 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 639

Query: 462 HVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWI 521
           +V+L + AS+ LF++EP + G +VLL+++YA A  W+ V  ++ +   + L+K PG S +
Sbjct: 640 NVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 699

Query: 522 EVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLG 581
           EV  K+  F + ++ +P  E+++  L  L  ++K  GY P  + VL D++ +EKE I++ 
Sbjct: 700 EVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMS 759

Query: 582 HSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKD 641
           HSE+LA+AF LI T    TIRI KNLR+C DCHSVTKFISK  +REI+VRD NRFHHFK+
Sbjct: 760 HSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKN 819

Query: 642 GVCSCGDYW 650
           GVCSCGDYW
Sbjct: 820 GVCSCGDYW 823

[Close]

BLAST of CSPI01G23360 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 3.2e-132
Identity = 242/591 (40.95%), Postives = 359/591 (60.74%), Query Frame = 0


Query: 61  LSHESNPTQQTCELL--ILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELG 120
           L +ES     T  LL  + + A    L   + +H L    G     ++ T  I+++S+ G
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270

Query: 121 TVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLK 180
            +     +F + RK  I  +NA+       G     L L+  + + G      T   L+ 
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330

Query: 181 ACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVK 240
             V+   ++ +      IH + L+  + +H  V T L  +Y++   +  A  +FDE P K
Sbjct: 331 --VSGHLMLIY-----AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEK 390

Query: 241 NVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKL 300
           ++ SW+AMI+ Y +NG   +A+ LFREM  +  +  PN VT+  +L ACA   AL  GK 
Sbjct: 391 SLPSWNAMISGYTQNGLTEDAISLFREMQKS--EFSPNPVTITCILSACAQLGALSLGKW 450

Query: 301 IHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGY 360
           +H  +     +S + V +ALI MYA+CG +   + +FD M KK+ V WN++IS YGLHG 
Sbjct: 451 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 510

Query: 361 GRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYA 420
           G++A+ IF EM++ G +P+ ++F+ VL ACSH GLV+EG ++F SM+  +G +PSV+HYA
Sbjct: 511 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 570

Query: 421 CMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPT 480
           CMVD+LGRA  L  A + IE + IEPG  VW +LLGACRIH    LA   S++LF+L+P 
Sbjct: 571 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPD 630

Query: 481 NAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQ 540
           N G +VLL++I++    + +   V++    R+L K PG + IE+    + FTS D+ +PQ
Sbjct: 631 NVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQ 690

Query: 541 GEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGD 600
            ++++  L  L  +M++ GY P+T+L L+D+++EE+E +V  HSE+LA+AFGLI T  G 
Sbjct: 691 VKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGT 750

Query: 601 TIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
            IRI KNLR+C DCH+VTK ISK  +R I+VRD NRFHHFKDGVCSCGDYW
Sbjct: 751 EIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792

[Close]

BLAST of CSPI01G23360 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.2e-131
Identity = 243/623 (39.00%), Postives = 379/623 (60.83%), Query Frame = 0


Query: 29  FSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDA 88
           F +N      S NNH   +L    N++ A        +P   T   L+ + +  + L   
Sbjct: 85  FPWNAIIRGYSRNNHFQDALLMYSNMQLA------RVSPDSFTFPHLLKACSGLSHLQMG 144

Query: 89  LDVHQLLVDGGFDQDPFLATKLINMFSELGTVDNARKVFD--KTRKRTIYVWNALFRALA 148
             VH  +   GFD D F+   LI ++++   + +AR VF+     +RTI  W A+  A A
Sbjct: 145 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 204

Query: 149 LAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYG 208
             G   + LE++ +M  M V  D   +  L+    A  CL   L++G+ IHA +++ G  
Sbjct: 205 QNGEPMEALEIFSQMRKMDVKPD---WVALVSVLNAFTCLQD-LKQGRSIHASVVKMGLE 264

Query: 209 AHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREM 268
               ++ +L  MYA+ G V+ A  +FD+M   N++ W+AMI+ YAKNG   EA+++F EM
Sbjct: 265 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 324

Query: 269 MLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCG 328
           +    D  P+++++ S + ACA   +LEQ + ++ Y+ R      + + SALI M+A+CG
Sbjct: 325 I--NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 384

Query: 329 KLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLG 388
            +E  +L+FDR   +DVV+W+++I  YGLHG  R+AI ++  M   G  P+ ++F+ +L 
Sbjct: 385 SVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLM 444

Query: 389 ACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGP 448
           AC+H+G+V EG   F  M  +H I P  +HYAC++DLLGRA  LD+A ++I+ + ++PG 
Sbjct: 445 ACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGV 504

Query: 449 KVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLL 508
            VWG+LL AC+ H HVEL E A+++LF ++P+N G+YV L+++YA A +WD V  V+  +
Sbjct: 505 TVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRM 564

Query: 509 DSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVL 568
             + L K  G SW+EVR ++ +F   D+ +P+ E++   +  + + +K+ G+       L
Sbjct: 565 KEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASL 624

Query: 569 YDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADRE 628
           +DL+ EE E  +  HSE++A+A+GLI+T +G  +RITKNLR C +CH+ TK ISK  DRE
Sbjct: 625 HDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDRE 684

Query: 629 IMVRDLNRFHHFKDGVCSCGDYW 650
           I+VRD NRFHHFKDGVCSCGDYW
Sbjct: 685 IVVRDTNRFHHFKDGVCSCGDYW 694

[Close]

BLAST of CSPI01G23360 vs. ExPASy TrEMBL
Match: A0A0A0LY40 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G524740 PE=3 SV=1)

HSP 1 Score: 1308.5 bits (3385), Expect = 0.0e+00
Identity = 646/649 (99.54%), Postives = 648/649 (99.85%), Query Frame = 0


Query: 1   MWALRTPHSTHYPPSSPRHSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYL 60
           MWALRTP+STHYPPSSPR+STSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYL
Sbjct: 1   MWALRTPYSTHYPPSSPRYSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYL 60

Query: 61  LSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELGTV 120
           LSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSEL TV
Sbjct: 61  LSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTV 120

Query: 121 DNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKAC 180
           DNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKAC
Sbjct: 121 DNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKAC 180

Query: 181 VASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNV 240
           VASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNV
Sbjct: 181 VASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNV 240

Query: 241 VSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIH 300
           VSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIH
Sbjct: 241 VSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIH 300

Query: 301 AYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGR 360
           AYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGR
Sbjct: 301 AYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGR 360

Query: 361 KAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACM 420
           KAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACM
Sbjct: 361 KAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACM 420

Query: 421 VDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNA 480
           VDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNA
Sbjct: 421 VDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNA 480

Query: 481 GNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGE 540
           GNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGE
Sbjct: 481 GNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGE 540

Query: 541 QLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTI 600
           QLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTI
Sbjct: 541 QLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTI 600

Query: 601 RITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
           RITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW
Sbjct: 601 RITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649

[Close]

BLAST of CSPI01G23360 vs. ExPASy TrEMBL
Match: A0A5A7VHC3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00960 PE=3 SV=1)

HSP 1 Score: 1231.5 bits (3185), Expect = 0.0e+00
Identity = 609/653 (93.26%), Postives = 627/653 (96.02%), Query Frame = 0


Query: 1   MWALRTPHSTHYPPSSPR----HSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQ 60
           MWALRTPHST YPPSS R    HSTSKLSV SFS NPST  NSN + LIQSLCK+GNLKQ
Sbjct: 1   MWALRTPHSTQYPPSSRRHSSAHSTSKLSVCSFSLNPSTSANSNKDQLIQSLCKEGNLKQ 60

Query: 61  ALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSE 120
           AL LLSHE NPTQQTCELLILSAARR SLSDALDVHQ LVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALVLLSHEPNPTQQTCELLILSAARRKSLSDALDVHQHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LGTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYL 180
           L +VDNARKVFDKTRKRTIYVWNALFRALALAG GNDVLELYPRM+MMGV  DRFTYTYL
Sbjct: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGNDVLELYPRMDMMGVPCDRFTYTYL 180

Query: 181 LKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMP 240
           LKACVAS+CLVSFLQKGKEIHAHILRHGYGAHVHVMTTL+DMYARFGCVSYASAVFDEMP
Sbjct: 181 LKACVASDCLVSFLQKGKEIHAHILRHGYGAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQG 300
           VKNVVSWSAMIACYAKNGKPYEALELFR+MMLNTHD VPNSVTMVSVLQACAAFAALEQG
Sbjct: 241 VKNVVSWSAMIACYAKNGKPYEALELFRDMMLNTHDLVPNSVTMVSVLQACAAFAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLH 360
           KLIHAYILRRGLDSILPVISAL+TMYARCGKLE GQ+IFDR+HKKDV+LWNSL SSYGLH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIHKKDVILWNSLFSSYGLH 360

Query: 361 GYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEH 420
           GYGRKAI+IFEEMID+G SPS+ISF+SVLGACSH GLVEEGKKLFESMVKEHGIQPSVEH
Sbjct: 361 GYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKKLFESMVKEHGIQPSVEH 420

Query: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLE 480
           YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLF+LE
Sbjct: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLADIYAEAEMWDEVKRV+KLL+SRELQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600
           PQGEQLHALLVNLSNEMKQRGY PQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
           GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of CSPI01G23360 vs. ExPASy TrEMBL
Match: A0A5D3BEB8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001880 PE=3 SV=1)

HSP 1 Score: 1230.3 bits (3182), Expect = 0.0e+00
Identity = 608/653 (93.11%), Postives = 627/653 (96.02%), Query Frame = 0


Query: 1   MWALRTPHSTHYPPSSPR----HSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQ 60
           MWALRTPHST YPPSS R    HSTSKLSV SFS NPST  NSN + LIQSLCK+GNLKQ
Sbjct: 1   MWALRTPHSTQYPPSSRRHSSAHSTSKLSVCSFSLNPSTSANSNKDQLIQSLCKEGNLKQ 60

Query: 61  ALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSE 120
           AL LLSHE NPTQQTCELLILSA+RR SLSDALDVHQ LVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALVLLSHEPNPTQQTCELLILSASRRKSLSDALDVHQHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LGTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYL 180
           L +VDNARKVFDKTRKRTIYVWNALFRALALAG GNDVLELYPRM+MMGV  DRFTYTYL
Sbjct: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGNDVLELYPRMDMMGVPCDRFTYTYL 180

Query: 181 LKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMP 240
           LKACVAS+CLVSFLQKGKEIHAHILRHGYGAHVHVMTTL+DMYARFGCVSYASAVFDEMP
Sbjct: 181 LKACVASDCLVSFLQKGKEIHAHILRHGYGAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQG 300
           VKNVVSWSAMIACYAKNGKPYEALELFR+MMLNTHD VPNSVTMVSVLQACAAFAALEQG
Sbjct: 241 VKNVVSWSAMIACYAKNGKPYEALELFRDMMLNTHDLVPNSVTMVSVLQACAAFAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLH 360
           KLIHAYILRRGLDSILPVISAL+TMYARCGKLE GQ+IFDR+HKKDV+LWNSL SSYGLH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIHKKDVILWNSLFSSYGLH 360

Query: 361 GYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEH 420
           GYGRKAI+IFEEMID+G SPS+ISF+SVLGACSH GLVEEGKKLFESMVKEHGIQPSVEH
Sbjct: 361 GYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKKLFESMVKEHGIQPSVEH 420

Query: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLE 480
           YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLF+LE
Sbjct: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLADIYAEAEMWDEVKRV+KLL+SRELQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600
           PQGEQLHALLVNLSNEMKQRGY PQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
           GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of CSPI01G23360 vs. ExPASy TrEMBL
Match: A0A1S3C5N6 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497132 PE=3 SV=1)

HSP 1 Score: 1230.3 bits (3182), Expect = 0.0e+00
Identity = 608/653 (93.11%), Postives = 627/653 (96.02%), Query Frame = 0


Query: 1   MWALRTPHSTHYPPSSPR----HSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQ 60
           MWALRTPHST YPPSS R    HSTSKLSV SFS NPST  NSN + LIQSLCK+GNLKQ
Sbjct: 1   MWALRTPHSTQYPPSSRRHSSAHSTSKLSVCSFSLNPSTSANSNKDQLIQSLCKEGNLKQ 60

Query: 61  ALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSE 120
           AL LLSHE NPTQQTCELLILSA+RR SLSDALDVHQ LVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALVLLSHEPNPTQQTCELLILSASRRKSLSDALDVHQHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LGTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYL 180
           L +VDNARKVFDKTRKRTIYVWNALFRALALAG GNDVLELYPRM+MMGV  DRFTYTYL
Sbjct: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGNDVLELYPRMDMMGVPCDRFTYTYL 180

Query: 181 LKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMP 240
           LKACVAS+CLVSFLQKGKEIHAHILRHGYGAHVHVMTTL+DMYARFGCVSYASAVFDEMP
Sbjct: 181 LKACVASDCLVSFLQKGKEIHAHILRHGYGAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQG 300
           VKNVVSWSAMIACYAKNGKPYEALELFR+MMLNTHD VPNSVTMVSVLQACAAFAALEQG
Sbjct: 241 VKNVVSWSAMIACYAKNGKPYEALELFRDMMLNTHDLVPNSVTMVSVLQACAAFAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLH 360
           KLIHAYILRRGLDSILPVISAL+TMYARCGKLE GQ+IFDR+HKKDV+LWNSL SSYGLH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIHKKDVILWNSLFSSYGLH 360

Query: 361 GYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEH 420
           GYGRKAI+IFEEMID+G SPS+ISF+SVLGACSH GLVEEGKKLFESMVKEHGIQPSVEH
Sbjct: 361 GYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKKLFESMVKEHGIQPSVEH 420

Query: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLE 480
           YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLF+LE
Sbjct: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLADIYAEAEMWDEVKRV+KLL+SRELQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600
           PQGEQLHALLVNLSNEMKQRGY PQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
           GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of CSPI01G23360 vs. ExPASy TrEMBL
Match: A0A6J1CLW0 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012148 PE=3 SV=1)

HSP 1 Score: 1191.0 bits (3080), Expect = 0.0e+00
Identity = 588/653 (90.05%), Postives = 614/653 (94.03%), Query Frame = 0


Query: 1   MWALRTPHSTHYPPSSPR----HSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQ 60
           MWALRTP ST YPPSS R    HSTS+ SV S + NPS   N N N LIQSLCKQGNLKQ
Sbjct: 1   MWALRTPQSTPYPPSSRRHCSAHSTSRPSVCSLALNPSIAANPNKNQLIQSLCKQGNLKQ 60

Query: 61  ALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSE 120
           AL LLSHESNPTQQTCELLILSAARRNSLSD LDVH+ LVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALLLLSHESNPTQQTCELLILSAARRNSLSDGLDVHRHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LGTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYL 180
           L +VD+ARKVFDKTR RTIYVWNALFRALALAG G +VLELY RMNM GV SDRFTYTYL
Sbjct: 121 LDSVDDARKVFDKTRNRTIYVWNALFRALALAGHGKEVLELYARMNMTGVPSDRFTYTYL 180

Query: 181 LKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMP 240
           LKACVASECLVS L+KGKEIHAHILRHGY AHVHVMTTL+DMYARFGCVSYASAVFDEMP
Sbjct: 181 LKACVASECLVSLLRKGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQG 300
           V+NVVSWSA+IACYAKNGKPYEALELF EMMLNTHDSVPNSVTMVSVLQACAA AALEQG
Sbjct: 241 VRNVVSWSAIIACYAKNGKPYEALELFCEMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLH 360
           KLIH YILRRGLDSILPVISAL+TMYARCGKLE GQL+FDRMHK+DVVLWNSLIS YG+H
Sbjct: 301 KLIHGYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMHKRDVVLWNSLISGYGVH 360

Query: 361 GYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEH 420
           GYGRKAI+IFEEMIDHGFSPS+ISF+SVLGACSH GLVEEGK+LFESMVKEHGI PSVEH
Sbjct: 361 GYGRKAIEIFEEMIDHGFSPSYISFVSVLGACSHAGLVEEGKELFESMVKEHGIHPSVEH 420

Query: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLE 480
           YACMVDLLGRANRLDEAAKI+ED+R+EPGPKVWGSLLGACRIHCHVELAERASKRLF+LE
Sbjct: 421 YACMVDLLGRANRLDEAAKIVEDMRLEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLADIYAEAEMWD+VKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDKVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600
           PQ EQLHALLVNLS EMKQRGY PQTK+VLYDLD+EEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQVEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
           GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD+NRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of CSPI01G23360 vs. NCBI nr
Match: XP_004154055.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucumis sativus] >KGN65752.1 hypothetical protein Csa_023270 [Cucumis sativus])

HSP 1 Score: 1308.5 bits (3385), Expect = 0.0e+00
Identity = 646/649 (99.54%), Postives = 648/649 (99.85%), Query Frame = 0


Query: 1   MWALRTPHSTHYPPSSPRHSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYL 60
           MWALRTP+STHYPPSSPR+STSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYL
Sbjct: 1   MWALRTPYSTHYPPSSPRYSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYL 60

Query: 61  LSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELGTV 120
           LSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSEL TV
Sbjct: 61  LSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTV 120

Query: 121 DNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKAC 180
           DNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKAC
Sbjct: 121 DNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKAC 180

Query: 181 VASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNV 240
           VASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNV
Sbjct: 181 VASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNV 240

Query: 241 VSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIH 300
           VSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIH
Sbjct: 241 VSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIH 300

Query: 301 AYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGR 360
           AYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGR
Sbjct: 301 AYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGR 360

Query: 361 KAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACM 420
           KAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACM
Sbjct: 361 KAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACM 420

Query: 421 VDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNA 480
           VDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNA
Sbjct: 421 VDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNA 480

Query: 481 GNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGE 540
           GNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGE
Sbjct: 481 GNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGE 540

Query: 541 QLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTI 600
           QLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTI
Sbjct: 541 QLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTI 600

Query: 601 RITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
           RITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW
Sbjct: 601 RITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649

[Close]

BLAST of CSPI01G23360 vs. NCBI nr
Match: XP_031742497.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic, partial [Cucumis sativus])

HSP 1 Score: 1267.7 bits (3279), Expect = 0.0e+00
Identity = 628/633 (99.21%), Postives = 628/633 (99.21%), Query Frame = 0


Query: 17  PRHSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLI 76
           P    SKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLI
Sbjct: 1   PAIPLSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLI 60

Query: 77  LSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELGTVDNARKVFDKTRKRTIY 136
           LSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSEL TVDNARKVFDKTRKRTIY
Sbjct: 61  LSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIY 120

Query: 137 VWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEI 196
           VWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEI
Sbjct: 121 VWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEI 180

Query: 197 HAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKP 256
           HAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKP
Sbjct: 181 HAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKP 240

Query: 257 YEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVIS 316
           YEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVIS
Sbjct: 241 YEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVIS 300

Query: 317 ALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSP 376
           ALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSP
Sbjct: 301 ALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSP 360

Query: 377 SHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKI 436
           SHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKI
Sbjct: 361 SHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKI 420

Query: 437 IEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMW 496
           IEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMW
Sbjct: 421 IEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMW 480

Query: 497 DEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQR 556
           DEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQR
Sbjct: 481 DEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQR 540

Query: 557 GYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVT 616
           GYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVT
Sbjct: 541 GYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVT 600

Query: 617 KFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
           KFISKFADREIMVRDLNRFHHFKDGVCSCGDYW
Sbjct: 601 KFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 633

[Close]

BLAST of CSPI01G23360 vs. NCBI nr
Match: KAA0067772.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1231.5 bits (3185), Expect = 0.0e+00
Identity = 609/653 (93.26%), Postives = 627/653 (96.02%), Query Frame = 0


Query: 1   MWALRTPHSTHYPPSSPR----HSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQ 60
           MWALRTPHST YPPSS R    HSTSKLSV SFS NPST  NSN + LIQSLCK+GNLKQ
Sbjct: 1   MWALRTPHSTQYPPSSRRHSSAHSTSKLSVCSFSLNPSTSANSNKDQLIQSLCKEGNLKQ 60

Query: 61  ALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSE 120
           AL LLSHE NPTQQTCELLILSAARR SLSDALDVHQ LVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALVLLSHEPNPTQQTCELLILSAARRKSLSDALDVHQHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LGTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYL 180
           L +VDNARKVFDKTRKRTIYVWNALFRALALAG GNDVLELYPRM+MMGV  DRFTYTYL
Sbjct: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGNDVLELYPRMDMMGVPCDRFTYTYL 180

Query: 181 LKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMP 240
           LKACVAS+CLVSFLQKGKEIHAHILRHGYGAHVHVMTTL+DMYARFGCVSYASAVFDEMP
Sbjct: 181 LKACVASDCLVSFLQKGKEIHAHILRHGYGAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQG 300
           VKNVVSWSAMIACYAKNGKPYEALELFR+MMLNTHD VPNSVTMVSVLQACAAFAALEQG
Sbjct: 241 VKNVVSWSAMIACYAKNGKPYEALELFRDMMLNTHDLVPNSVTMVSVLQACAAFAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLH 360
           KLIHAYILRRGLDSILPVISAL+TMYARCGKLE GQ+IFDR+HKKDV+LWNSL SSYGLH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIHKKDVILWNSLFSSYGLH 360

Query: 361 GYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEH 420
           GYGRKAI+IFEEMID+G SPS+ISF+SVLGACSH GLVEEGKKLFESMVKEHGIQPSVEH
Sbjct: 361 GYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKKLFESMVKEHGIQPSVEH 420

Query: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLE 480
           YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLF+LE
Sbjct: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLADIYAEAEMWDEVKRV+KLL+SRELQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600
           PQGEQLHALLVNLSNEMKQRGY PQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
           GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of CSPI01G23360 vs. NCBI nr
Match: XP_008457445.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucumis melo] >TYJ97374.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1230.3 bits (3182), Expect = 0.0e+00
Identity = 608/653 (93.11%), Postives = 627/653 (96.02%), Query Frame = 0


Query: 1   MWALRTPHSTHYPPSSPR----HSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQ 60
           MWALRTPHST YPPSS R    HSTSKLSV SFS NPST  NSN + LIQSLCK+GNLKQ
Sbjct: 1   MWALRTPHSTQYPPSSRRHSSAHSTSKLSVCSFSLNPSTSANSNKDQLIQSLCKEGNLKQ 60

Query: 61  ALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSE 120
           AL LLSHE NPTQQTCELLILSA+RR SLSDALDVHQ LVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALVLLSHEPNPTQQTCELLILSASRRKSLSDALDVHQHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LGTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYL 180
           L +VDNARKVFDKTRKRTIYVWNALFRALALAG GNDVLELYPRM+MMGV  DRFTYTYL
Sbjct: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGNDVLELYPRMDMMGVPCDRFTYTYL 180

Query: 181 LKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMP 240
           LKACVAS+CLVSFLQKGKEIHAHILRHGYGAHVHVMTTL+DMYARFGCVSYASAVFDEMP
Sbjct: 181 LKACVASDCLVSFLQKGKEIHAHILRHGYGAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQG 300
           VKNVVSWSAMIACYAKNGKPYEALELFR+MMLNTHD VPNSVTMVSVLQACAAFAALEQG
Sbjct: 241 VKNVVSWSAMIACYAKNGKPYEALELFRDMMLNTHDLVPNSVTMVSVLQACAAFAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLH 360
           KLIHAYILRRGLDSILPVISAL+TMYARCGKLE GQ+IFDR+HKKDV+LWNSL SSYGLH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIHKKDVILWNSLFSSYGLH 360

Query: 361 GYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEH 420
           GYGRKAI+IFEEMID+G SPS+ISF+SVLGACSH GLVEEGKKLFESMVKEHGIQPSVEH
Sbjct: 361 GYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKKLFESMVKEHGIQPSVEH 420

Query: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLE 480
           YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLF+LE
Sbjct: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLADIYAEAEMWDEVKRV+KLL+SRELQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600
           PQGEQLHALLVNLSNEMKQRGY PQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
           GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of CSPI01G23360 vs. NCBI nr
Match: XP_038895613.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Benincasa hispida])

HSP 1 Score: 1213.4 bits (3138), Expect = 0.0e+00
Identity = 602/653 (92.19%), Postives = 620/653 (94.95%), Query Frame = 0


Query: 1   MWALRTPHSTHYPPSSPR----HSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQ 60
           MWALRTP ST YPPSS R    HSTSK SV S S NPST  NSN N LIQSLCKQGNLKQ
Sbjct: 1   MWALRTPQSTQYPPSSRRHCSAHSTSKPSVCSVSLNPSTAANSNKNQLIQSLCKQGNLKQ 60

Query: 61  ALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSE 120
           AL LLSHESNPTQQT ELLILSAARRNSLSD LDVHQ LVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALLLLSHESNPTQQTWELLILSAARRNSLSDGLDVHQHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LGTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYL 180
           L +VD ARKVFDKTRKRTIYVWNALFRALALAG GNDVLELY RMN MG+ SDRFTYTYL
Sbjct: 121 LDSVDYARKVFDKTRKRTIYVWNALFRALALAGHGNDVLELYARMNTMGLPSDRFTYTYL 180

Query: 181 LKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMP 240
           LKACVASECLVSFLQKGKEIHAHILRHGY  HVHVMTTL+DMYARFGCVSYASAVFDEMP
Sbjct: 181 LKACVASECLVSFLQKGKEIHAHILRHGYEGHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQG 300
           V+NVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAA AALEQG
Sbjct: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLH 360
           KLIHAYILRRGLDSILPVISAL+TMYARCGKLE  QL+FDRMHK+DVVLWNSLISSYG+H
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELSQLVFDRMHKRDVVLWNSLISSYGVH 360

Query: 361 GYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEH 420
           GYGRKAI+IFEEMID G SPS+ISF+SVLGACSH GLVEEGKKLFESMVKEHGIQPSVEH
Sbjct: 361 GYGRKAIEIFEEMIDRGVSPSYISFVSVLGACSHAGLVEEGKKLFESMVKEHGIQPSVEH 420

Query: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLE 480
           YACMVDLLGRANRLDEAAKI+EDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLF+LE
Sbjct: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540
           PTNAGNYVLLADIYAEAEMWDEVKRV+KLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600
           PQGEQLHALLVNLSNEMKQRGYTPQTK+VLYDLD+EEKERIVLGHSEK+AVAFGLINTSK
Sbjct: 541 PQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVLGHSEKIAVAFGLINTSK 600

Query: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
           GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD+NRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 653

[Close]

BLAST of CSPI01G23360 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 973.8 bits (2516), Expect = 6.9e-284
Identity = 473/645 (73.33%), Postives = 554/645 (85.89%), Query Frame = 0


Query: 6   TPHSTHYPPSSP-RHSTSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHE 65
           T H+ ++ P SP +  +  +++++ S +       +NN LIQSLCK+G LKQA+ +LS E
Sbjct: 13  TYHTVNFLPRSPLKPPSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQE 72

Query: 66  SNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELGTVDNAR 125
           S+P+QQT ELLIL    R+SLSDAL VH+ ++D G DQDPFLATKLI M+S+LG+VD AR
Sbjct: 73  SSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYAR 132

Query: 126 KVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASE 185
           KVFDKTRKRTIYVWNALFRAL LAG G +VL LY +MN +GV SDRFTYTY+LKACVASE
Sbjct: 133 KVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASE 192

Query: 186 CLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWS 245
           C V+ L KGKEIHAH+ R GY +HV++MTTL+DMYARFGCV YAS VF  MPV+NVVSWS
Sbjct: 193 CTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWS 252

Query: 246 AMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYIL 305
           AMIACYAKNGK +EAL  FREMM  T DS PNSVTMVSVLQACA+ AALEQGKLIH YIL
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 312

Query: 306 RRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIK 365
           RRGLDSILPVISAL+TMY RCGKLE GQ +FDRMH +DVV WNSLISSYG+HGYG+KAI+
Sbjct: 313 RRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQ 372

Query: 366 IFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLL 425
           IFEEM+ +G SP+ ++F+SVLGACSH GLVEEGK+LFE+M ++HGI+P +EHYACMVDLL
Sbjct: 373 IFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLL 432

Query: 426 GRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYV 485
           GRANRLDEAAK+++D+R EPGPKVWGSLLG+CRIH +VELAERAS+RLF LEP NAGNYV
Sbjct: 433 GRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYV 492

Query: 486 LLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHA 545
           LLADIYAEA+MWDEVKRVKKLL+ R LQK+PGR W+EVRRK+YSF SVDEFNP  EQ+HA
Sbjct: 493 LLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHA 552

Query: 546 LLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITK 605
            LV L+ +MK++GY PQTK VLY+L+ EEKERIVLGHSEKLA+AFGLINTSKG+ IRITK
Sbjct: 553 FLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITK 612

Query: 606 NLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
           NLRLCEDCH  TKFISKF ++EI+VRD+NRFH FK+GVCSCGDYW
Sbjct: 613 NLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657

[Close]

BLAST of CSPI01G23360 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 486.1 bits (1250), Expect = 4.4e-137
Identity = 236/559 (42.22%), Postives = 351/559 (62.79%), Query Frame = 0


Query: 91  VHQLLVDGGFDQDPFLATKLINMFSELGTVDNARKVFDKTRKRTIYVWNALFRALALAGR 150
           VH + V   F ++      L++M+S+ G +D+A+ VF +   R++  + ++    A  G 
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377

Query: 151 GNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVH 210
             + ++L+  M   G+S D +T T +L  C         L +GK +H  I  +  G  + 
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR----YRLLDEGKRVHEWIKENDLGFDIF 437

Query: 211 VMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNT 270
           V   LMDMYA+ G +  A  VF EM VK+++SW+ +I  Y+KN    EAL LF  ++L  
Sbjct: 438 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEE 497

Query: 271 HDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLES 330
               P+  T+  VL ACA+ +A ++G+ IH YI+R G  S   V ++L+ MYA+CG L  
Sbjct: 498 KRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLL 557

Query: 331 GQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSH 390
             ++FD +  KD+V W  +I+ YG+HG+G++AI +F +M   G     ISF+S+L ACSH
Sbjct: 558 AHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSH 617

Query: 391 TGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWG 450
           +GLV+EG + F  M  E  I+P+VEHYAC+VD+L R   L +A + IE++ I P   +WG
Sbjct: 618 SGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWG 677

Query: 451 SLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRE 510
           +LL  CRIH  V+LAE+ ++++F+LEP N G YVL+A+IYAEAE W++VKR++K +  R 
Sbjct: 678 ALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRG 737

Query: 511 LQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLD 570
           L+K PG SWIE++ ++  F + D  NP+ E + A L  +   M + GY+P TK  L D +
Sbjct: 738 LRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAE 797

Query: 571 QEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVR 630
           + EKE  + GHSEKLA+A G+I++  G  IR+TKNLR+C DCH + KF+SK   REI++R
Sbjct: 798 EMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLR 857

Query: 631 DLNRFHHFKDGVCSCGDYW 650
           D NRFH FKDG CSC  +W
Sbjct: 858 DSNRFHQFKDGHCSCRGFW 871

[Close]

BLAST of CSPI01G23360 vs. TAIR 10
Match: AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 479.9 bits (1234), Expect = 3.1e-135
Identity = 237/609 (38.92%), Postives = 378/609 (62.07%), Query Frame = 0


Query: 42  NHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFD 101
           N +I   C+ GN K+AL L +        T   L+ +       +  + +H   +  G +
Sbjct: 220 NAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE 279

Query: 102 QDPFLATKLINMFSELGTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRM 161
            + F++ KLI++++E G + + +KVFD+   R +  WN++ +A  L  +    + L+  M
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339

Query: 162 NMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAH-VHVMTTLMDMYA 221
            +  +  D  T   L  A + S+  +  ++  + +    LR G+    + +   ++ MYA
Sbjct: 340 RLSRIQPDCLTLISL--ASILSQ--LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 399

Query: 222 RFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTM 281
           + G V  A AVF+ +P  +V+SW+ +I+ YA+NG   EA+E++  +M    +   N  T 
Sbjct: 400 KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY-NIMEEEGEIAANQGTW 459

Query: 282 VSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHK 341
           VSVL AC+   AL QG  +H  +L+ GL   + V+++L  MY +CG+LE    +F ++ +
Sbjct: 460 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 519

Query: 342 KDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKL 401
            + V WN+LI+ +G HG+G KA+ +F+EM+D G  P HI+F+++L ACSH+GLV+EG+  
Sbjct: 520 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 579

Query: 402 FESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHC 461
           FE M  ++GI PS++HY CMVD+ GRA +L+ A K I+ + ++P   +WG+LL ACR+H 
Sbjct: 580 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 639

Query: 462 HVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWI 521
           +V+L + AS+ LF++EP + G +VLL+++YA A  W+ V  ++ +   + L+K PG S +
Sbjct: 640 NVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 699

Query: 522 EVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLG 581
           EV  K+  F + ++ +P  E+++  L  L  ++K  GY P  + VL D++ +EKE I++ 
Sbjct: 700 EVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMS 759

Query: 582 HSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKD 641
           HSE+LA+AF LI T    TIRI KNLR+C DCHSVTKFISK  +REI+VRD NRFHHFK+
Sbjct: 760 HSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKN 819

Query: 642 GVCSCGDYW 650
           GVCSCGDYW
Sbjct: 820 GVCSCGDYW 823

[Close]

BLAST of CSPI01G23360 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 473.8 bits (1218), Expect = 2.2e-133
Identity = 242/591 (40.95%), Postives = 359/591 (60.74%), Query Frame = 0


Query: 61  LSHESNPTQQTCELL--ILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELG 120
           L +ES     T  LL  + + A    L   + +H L    G     ++ T  I+++S+ G
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270

Query: 121 TVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLK 180
            +     +F + RK  I  +NA+       G     L L+  + + G      T   L+ 
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330

Query: 181 ACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVK 240
             V+   ++ +      IH + L+  + +H  V T L  +Y++   +  A  +FDE P K
Sbjct: 331 --VSGHLMLIY-----AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEK 390

Query: 241 NVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKL 300
           ++ SW+AMI+ Y +NG   +A+ LFREM  +  +  PN VT+  +L ACA   AL  GK 
Sbjct: 391 SLPSWNAMISGYTQNGLTEDAISLFREMQKS--EFSPNPVTITCILSACAQLGALSLGKW 450

Query: 301 IHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGY 360
           +H  +     +S + V +ALI MYA+CG +   + +FD M KK+ V WN++IS YGLHG 
Sbjct: 451 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 510

Query: 361 GRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYA 420
           G++A+ IF EM++ G +P+ ++F+ VL ACSH GLV+EG ++F SM+  +G +PSV+HYA
Sbjct: 511 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 570

Query: 421 CMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPT 480
           CMVD+LGRA  L  A + IE + IEPG  VW +LLGACRIH    LA   S++LF+L+P 
Sbjct: 571 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPD 630

Query: 481 NAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQ 540
           N G +VLL++I++    + +   V++    R+L K PG + IE+    + FTS D+ +PQ
Sbjct: 631 NVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQ 690

Query: 541 GEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGD 600
            ++++  L  L  +M++ GY P+T+L L+D+++EE+E +V  HSE+LA+AFGLI T  G 
Sbjct: 691 VKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGT 750

Query: 601 TIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 650
            IRI KNLR+C DCH+VTK ISK  +R I+VRD NRFHHFKDGVCSCGDYW
Sbjct: 751 EIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792

[Close]

BLAST of CSPI01G23360 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 471.9 bits (1213), Expect = 8.5e-133
Identity = 243/623 (39.00%), Postives = 379/623 (60.83%), Query Frame = 0


Query: 29  FSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDA 88
           F +N      S NNH   +L    N++ A        +P   T   L+ + +  + L   
Sbjct: 85  FPWNAIIRGYSRNNHFQDALLMYSNMQLA------RVSPDSFTFPHLLKACSGLSHLQMG 144

Query: 89  LDVHQLLVDGGFDQDPFLATKLINMFSELGTVDNARKVFD--KTRKRTIYVWNALFRALA 148
             VH  +   GFD D F+   LI ++++   + +AR VF+     +RTI  W A+  A A
Sbjct: 145 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 204

Query: 149 LAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYG 208
             G   + LE++ +M  M V  D   +  L+    A  CL   L++G+ IHA +++ G  
Sbjct: 205 QNGEPMEALEIFSQMRKMDVKPD---WVALVSVLNAFTCLQD-LKQGRSIHASVVKMGLE 264

Query: 209 AHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREM 268
               ++ +L  MYA+ G V+ A  +FD+M   N++ W+AMI+ YAKNG   EA+++F EM
Sbjct: 265 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 324

Query: 269 MLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCG 328
           +    D  P+++++ S + ACA   +LEQ + ++ Y+ R      + + SALI M+A+CG
Sbjct: 325 I--NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 384

Query: 329 KLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLG 388
            +E  +L+FDR   +DVV+W+++I  YGLHG  R+AI ++  M   G  P+ ++F+ +L 
Sbjct: 385 SVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLM 444

Query: 389 ACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGP 448
           AC+H+G+V EG   F  M  +H I P  +HYAC++DLLGRA  LD+A ++I+ + ++PG 
Sbjct: 445 ACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGV 504

Query: 449 KVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLL 508
            VWG+LL AC+ H HVEL E A+++LF ++P+N G+YV L+++YA A +WD V  V+  +
Sbjct: 505 TVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRM 564

Query: 509 DSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVL 568
             + L K  G SW+EVR ++ +F   D+ +P+ E++   +  + + +K+ G+       L
Sbjct: 565 KEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASL 624

Query: 569 YDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADRE 628
           +DL+ EE E  +  HSE++A+A+GLI+T +G  +RITKNLR C +CH+ TK ISK  DRE
Sbjct: 625 HDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDRE 684

Query: 629 IMVRDLNRFHHFKDGVCSCGDYW 650
           I+VRD NRFHHFKDGVCSCGDYW
Sbjct: 685 IVVRDTNRFHHFKDGVCSCGDYW 694

The following BLAST results are available for this feature:

BLAST of CSPI01G23360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STF3	9.7e-283	73.33	Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop...	[more]
Q9SN39	6.2e-136	42.22	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]
O81767	4.4e-134	38.92	Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX...	[more]
Q9SUH6	3.2e-132	40.95	Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX...	[more]
Q9LTV8	1.2e-131	39.00	Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX...	[more]

BLAST of CSPI01G23360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY40	0.0e+00	99.54	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G5247...	[more]
A0A5A7VHC3	0.0e+00	93.26	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3BEB8	0.0e+00	93.11	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C5N6	0.0e+00	93.11	pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Cucumis ...	[more]
A0A6J1CLW0	0.0e+00	90.05	pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Momordic...	[more]

BLAST of CSPI01G23360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004154055.1	0.0e+00	99.54	pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucumis sa...	[more]
XP_031742497.1	0.0e+00	99.21	pentatricopeptide repeat-containing protein At3g46790, chloroplastic, partial [C...	[more]
KAA0067772.1	0.0e+00	93.26	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008457445.1	0.0e+00	93.11	PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic ...	[more]
XP_038895613.1	0.0e+00	92.19	pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Benincasa ...	[more]

BLAST of CSPI01G23360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46790.1	6.9e-284	73.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G18750.1	4.4e-137	42.22	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G33990.1	3.1e-135	38.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30700.1	2.2e-133	40.95	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G12770.1	8.5e-133	39.00	mitochondrial editing factor 22	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 241..267 e-value: 4.1E-7 score: 27.8 coord: 344..377 e-value: 8.7E-8 score: 29.9 coord: 380..413 e-value: 2.8E-4 score: 18.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 134..181 e-value: 0.012 score: 15.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 42..61 e-value: 0.95 score: 9.9 coord: 241..267 e-value: 1.1E-8 score: 34.7 coord: 212..239 e-value: 0.0051 score: 17.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 341..388 e-value: 4.9E-9 score: 36.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 342..376 score: 12.353442
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 377..412 score: 8.889672
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 134..168 score: 8.780059
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 239..273 score: 11.070971
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 515..639 e-value: 2.6E-39 score: 134.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 189..295 e-value: 1.7E-21 score: 78.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 37..188 e-value: 5.5E-22 score: 80.5 coord: 296..544 e-value: 2.2E-40 score: 140.9
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 304..500
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..38
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 38..638
None	No IPR available	PANTHER	PTHR24015:SF96	OS01G0848300 PROTEIN	coord: 38..638

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G23360.1	CSPI01G23360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding