CSPI01G23040 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G23040
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RING-type domain-containing protein
Location	Chr1: 18712838 .. 18713281 (+)
RNA-Seq Expression	CSPI01G23040
Synteny	CSPI01G23040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACCCCCGCCGTATATTGCCGCTTCTCCAATGCCAACGAACGGGTTCGAAGCCATTTTTGATGACTATGAGCTTTTGGCAGCCATATGTTTTGCCATTATAGTCTACTTCCTCTCCTTCACTTTCTACTTCAAAACCGGAAATAATGAATCAGAAGTCGACACTGGGACGGTCGAAGATCGATTGCCTGTGTTCCGAGAGCGGGAGATTGTACAGATTGAGACAATGGTTTTCAGTTATTACAGGGAAGCTAAGGGAAGTGAGAATGATGATGATTACGAATGTGTGATTTGCTTGAATAAATTCGAAGATGGCCAAAAATGCCAATGGATGAAAAAGTGTGGTCATATATTTCATCGTAGCTGCATCGATCGGTGGCTCAGGACGGAGCGGGAATGTCCGCTTTGCCGAAGCTGCGTTTGCGTCGTCGTCAATCCATAA

mRNA sequence

ATGTCACCCCCGCCGTATATTGCCGCTTCTCCAATGCCAACGAACGGGTTCGAAGCCATTTTTGATGACTATGAGCTTTTGGCAGCCATATGTTTTGCCATTATAGTCTACTTCCTCTCCTTCACTTTCTACTTCAAAACCGGAAATAATGAATCAGAAGTCGACACTGGGACGGTCGAAGATCGATTGCCTGTGTTCCGAGAGCGGGAGATTGTACAGATTGAGACAATGGTTTTCAGTTATTACAGGGAAGCTAAGGGAAGTGAGAATGATGATGATTACGAATGTGTGATTTGCTTGAATAAATTCGAAGATGGCCAAAAATGCCAATGGATGAAAAAGTGTGGTCATATATTTCATCGTAGCTGCATCGATCGGTGGCTCAGGACGGAGCGGGAATGTCCGCTTTGCCGAAGCTGCGTTTGCGTCGTCGTCAATCCATAA

Coding sequence (CDS)

ATGTCACCCCCGCCGTATATTGCCGCTTCTCCAATGCCAACGAACGGGTTCGAAGCCATTTTTGATGACTATGAGCTTTTGGCAGCCATATGTTTTGCCATTATAGTCTACTTCCTCTCCTTCACTTTCTACTTCAAAACCGGAAATAATGAATCAGAAGTCGACACTGGGACGGTCGAAGATCGATTGCCTGTGTTCCGAGAGCGGGAGATTGTACAGATTGAGACAATGGTTTTCAGTTATTACAGGGAAGCTAAGGGAAGTGAGAATGATGATGATTACGAATGTGTGATTTGCTTGAATAAATTCGAAGATGGCCAAAAATGCCAATGGATGAAAAAGTGTGGTCATATATTTCATCGTAGCTGCATCGATCGGTGGCTCAGGACGGAGCGGGAATGTCCGCTTTGCCGAAGCTGCGTTTGCGTCGTCGTCAATCCATAA

Protein sequence

MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNESEVDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP*

Homology

[Close]

BLAST of CSPI01G23040 vs. ExPASy Swiss-Prot
Match: Q9LRB7 (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.8e-11
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 89  ENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP 148
           E+DD  EC +CL + EDG++ +++ +CGH FH  C+D WL +   CPLCR  V V   P
Sbjct: 127 EDDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVVVPPPP 185

[Close]

BLAST of CSPI01G23040 vs. ExPASy Swiss-Prot
Match: Q9LX93 (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-11
Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 86  KGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVV 145
           KG    D  EC +CLN+FE+ +  + + KC H FH +CID WL + + CPLCR+ V ++ 
Sbjct: 125 KGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLIT 184

Query: 146 NP 148
            P
Sbjct: 185 EP 186

[Close]

BLAST of CSPI01G23040 vs. ExPASy Swiss-Prot
Match: Q9SRM0 (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.1e-11
Identity = 38/120 (31.67%), Postives = 62/120 (51.67%), Query Frame = 0


Query: 28  AAICFAIIVYFLSFTFYFKTG--NNESEVDTGTVEDRLPVFREREI--VQIETMVFSYYR 87
           A   F+++++F   T Y        +S     +  DRL   R   +   +I ++     R
Sbjct: 36  ALALFSVVLFFALLTLYIHRNCLPRDSINLHASSPDRLTRCRSGGLDPAEIRSLPVVLCR 95

Query: 88  EAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCV 144
             + +E +++ EC ICL  FE+G+K + +  C H +H  C+DRWL+TE  CPLCR  + V
Sbjct: 96  RER-AEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRV 154

[Close]

BLAST of CSPI01G23040 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 5.3e-11
Identity = 42/141 (29.79%), Postives = 67/141 (47.52%), Query Frame = 0


Query: 9   ASPMPTN---GFEAIFDDYELLAAICFAIIVYFLSFTFYFK--TGNNESEVD-TGTVEDR 68
           + P PTN    +  +     ++  I  A + +   F+ YF+  +G  ++ V   G    R
Sbjct: 31  SQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGARSR 90

Query: 69  LPV---FREREIVQIETMVFSYYREAKGSE-NDDDYECVICLNKFEDGQKCQWMKKCGHI 128
             V    R  ++  +ET     Y + K  +    + EC ICLN+FED +  + + KC H+
Sbjct: 91  ATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHV 150

Query: 129 FHRSCIDRWLRTERECPLCRS 140
           FH  CID WL     CP+CR+
Sbjct: 151 FHPHCIDAWLEAHVTCPVCRA 171

[Close]

BLAST of CSPI01G23040 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.1e-11
Identity = 29/75 (38.67%), Postives = 44/75 (58.67%), Query Frame = 0


Query: 75  ETMV--FSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTER 134
           E+M+   + Y+   G    D  +C +CL++FE+ +  + + KC H FH  CID WL++  
Sbjct: 119 ESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHS 178

Query: 135 ECPLCRSCVCVVVNP 148
            CPLCR+ V  V NP
Sbjct: 179 NCPLCRAFVTGVNNP 193

[Close]

BLAST of CSPI01G23040 vs. ExPASy TrEMBL
Match: A0A0A0LXE1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G515480 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 8.7e-81
Identity = 144/147 (97.96%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNESEVDTGTVE 60
           MSPPPYIAASPMPTNGFEAIFDD+ELLAAICFAIIVYFLSFTFYFKTGNNESE DTGTVE
Sbjct: 1   MSPPPYIAASPMPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNESEFDTGTVE 60

Query: 61  DRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFH 120
           DRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFH
Sbjct: 61  DRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFH 120

Query: 121 RSCIDRWLRTERECPLCRSCVCVVVNP 148
            SCIDRWLRTERECPLCRSCVCVVVNP
Sbjct: 121 CSCIDRWLRTERECPLCRSCVCVVVNP 147

[Close]

BLAST of CSPI01G23040 vs. ExPASy TrEMBL
Match: A0A5D3BGV5 (RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002280 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.2e-60
Identity = 121/160 (75.62%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 1   MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNE---SEVDTG 60
           MS P YIAASPMP NG EA+FDDY+++AAICFAIIVYF+SFT YFKTGNN+    + D G
Sbjct: 1   MSSPAYIAASPMPMNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVG 60

Query: 61  TVEDRLPVFRER------EIVQIETMVFSYYREAKGSEN----DDDYECVICLNKFEDGQ 120
           TVE+ LP FRER      EIVQIE MVFS YREAK SEN    DDDYECVICLNKFED Q
Sbjct: 61  TVEE-LPAFRERVVRDQQEIVQIEAMVFS-YREAKRSENDDDDDDDYECVICLNKFEDAQ 120

Query: 121 KCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP 148
           KC+WMKKCGHIFHRSCIDRWL+TERECPLCR+CVCVVV P
Sbjct: 121 KCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 158

[Close]

BLAST of CSPI01G23040 vs. ExPASy TrEMBL
Match: A0A1S3C6H7 (RING-H2 finger protein ATL66-like OS=Cucumis melo OX=3656 GN=LOC103497236 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.2e-60
Identity = 121/160 (75.62%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 1   MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNE---SEVDTG 60
           MS P YIAASPMP NG EA+FDDY+++AAICFAIIVYF+SFT YFKTGNN+    + D G
Sbjct: 1   MSSPAYIAASPMPMNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVG 60

Query: 61  TVEDRLPVFRER------EIVQIETMVFSYYREAKGSEN----DDDYECVICLNKFEDGQ 120
           TVE+ LP FRER      EIVQIE MVFS YREAK SEN    DDDYECVICLNKFED Q
Sbjct: 61  TVEE-LPAFRERVVRDQQEIVQIEAMVFS-YREAKRSENDDDDDDDYECVICLNKFEDAQ 120

Query: 121 KCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP 148
           KC+WMKKCGHIFHRSCIDRWL+TERECPLCR+CVCVVV P
Sbjct: 121 KCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 158

[Close]

BLAST of CSPI01G23040 vs. ExPASy TrEMBL
Match: A0A5A7VPW6 (RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00550 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.9e-60
Identity = 121/161 (75.16%), Postives = 132/161 (81.99%), Query Frame = 0


Query: 1   MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNE---SEVDTG 60
           MS P YIAASPMP NG EA+FDDY+++AAICFAIIVYF+SFT YFKTGNN+    + D G
Sbjct: 1   MSSPAYIAASPMPMNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVG 60

Query: 61  TVEDRLPVFRER------EIVQIETMVFSYYREAKGSEN-----DDDYECVICLNKFEDG 120
           TVE+ LP FRER      EIVQIE MVFS YREAK SEN     DDDYECVICLNKFED 
Sbjct: 61  TVEE-LPAFRERVVRDQQEIVQIEAMVFS-YREAKRSENDDDDDDDDYECVICLNKFEDA 120

Query: 121 QKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP 148
           QKC+WMKKCGHIFHRSCIDRWL+TERECPLCR+CVCVVV P
Sbjct: 121 QKCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 159

[Close]

BLAST of CSPI01G23040 vs. ExPASy TrEMBL
Match: A0A6J1KAT3 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111493250 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 5.7e-32
Identity = 84/156 (53.85%), Postives = 100/156 (64.10%), Query Frame = 0


Query: 1   MSPPPYIAASPMPTNGFEAIFDDYEL--------LAAICFAIIVYFLSFTFYFKTGNNES 60
           M  PP  AASP P     AI   Y L        L AICF II+Y +   F+      +S
Sbjct: 1   MPLPPSFAASPPP---ISAIVKTYGLRWTNNNLALIAICFLIILYLILLNFF------KS 60

Query: 61  EVDTGT-VEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQW 120
           E+++G+     LPV RE EIV+IE  VFS YREA G  +D   EC ICL++FEDGQKC+ 
Sbjct: 61  ELESGSEPAGALPVVREPEIVRIEASVFS-YREADGGHDD---ECAICLDEFEDGQKCRK 120

Query: 121 MKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP 148
           M KCGHIFHR CIDRWL+ +R CPLCRSCVCVVV+P
Sbjct: 121 MNKCGHIFHRRCIDRWLKVDRHCPLCRSCVCVVVHP 143

[Close]

BLAST of CSPI01G23040 vs. NCBI nr
Match: XP_004151032.1 (RING-H2 finger protein ATL66 [Cucumis sativus])

HSP 1 Score: 309.3 bits (791), Expect = 1.8e-80
Identity = 144/147 (97.96%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNESEVDTGTVE 60
           MSPPPYIAASPMPTNGFEAIFDD+ELLAAICFAIIVYFLSFTFYFKTGNNESE DTGTVE
Sbjct: 1   MSPPPYIAASPMPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNESEFDTGTVE 60

Query: 61  DRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFH 120
           DRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFH
Sbjct: 61  DRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFH 120

Query: 121 RSCIDRWLRTERECPLCRSCVCVVVNP 148
            SCIDRWLRTERECPLCRSCVCVVVNP
Sbjct: 121 CSCIDRWLRTERECPLCRSCVCVVVNP 147

[Close]

BLAST of CSPI01G23040 vs. NCBI nr
Match: XP_008457571.1 (PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >TYJ97408.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa])

HSP 1 Score: 241.5 bits (615), Expect = 4.6e-60
Identity = 121/160 (75.62%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 1   MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNE---SEVDTG 60
           MS P YIAASPMP NG EA+FDDY+++AAICFAIIVYF+SFT YFKTGNN+    + D G
Sbjct: 1   MSSPAYIAASPMPMNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVG 60

Query: 61  TVEDRLPVFRER------EIVQIETMVFSYYREAKGSEN----DDDYECVICLNKFEDGQ 120
           TVE+ LP FRER      EIVQIE MVFS YREAK SEN    DDDYECVICLNKFED Q
Sbjct: 61  TVEE-LPAFRERVVRDQQEIVQIEAMVFS-YREAKRSENDDDDDDDYECVICLNKFEDAQ 120

Query: 121 KCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP 148
           KC+WMKKCGHIFHRSCIDRWL+TERECPLCR+CVCVVV P
Sbjct: 121 KCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 158

[Close]

BLAST of CSPI01G23040 vs. NCBI nr
Match: KAA0067735.1 (RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa])

HSP 1 Score: 241.1 bits (614), Expect = 6.0e-60
Identity = 121/161 (75.16%), Postives = 132/161 (81.99%), Query Frame = 0


Query: 1   MSPPPYIAASPMPTNGFEAIFDDYELLAAICFAIIVYFLSFTFYFKTGNNE---SEVDTG 60
           MS P YIAASPMP NG EA+FDDY+++AAICFAIIVYF+SFT YFKTGNN+    + D G
Sbjct: 1   MSSPAYIAASPMPMNGIEALFDDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSDQSDVG 60

Query: 61  TVEDRLPVFRER------EIVQIETMVFSYYREAKGSEN-----DDDYECVICLNKFEDG 120
           TVE+ LP FRER      EIVQIE MVFS YREAK SEN     DDDYECVICLNKFED 
Sbjct: 61  TVEE-LPAFRERVVRDQQEIVQIEAMVFS-YREAKRSENDDDDDDDDYECVICLNKFEDA 120

Query: 121 QKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP 148
           QKC+WMKKCGHIFHRSCIDRWL+TERECPLCR+CVCVVV P
Sbjct: 121 QKCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 159

[Close]

BLAST of CSPI01G23040 vs. NCBI nr
Match: KAE8653246.1 (hypothetical protein Csa_019623 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 1.9e-53
Identity = 99/102 (97.06%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 46  KTGNNESEVDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFED 105
           K GNNESE DTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFED
Sbjct: 45  KAGNNESEFDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFED 104

Query: 106 GQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP 148
           GQKCQWMKKCGHIFH SCIDRWLRTERECPLCRSCVCVVVNP
Sbjct: 105 GQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP 146

[Close]

BLAST of CSPI01G23040 vs. NCBI nr
Match: XP_022998666.1 (RING-H2 finger protein ATL56-like [Cucurbita maxima])

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-31
Identity = 84/156 (53.85%), Postives = 100/156 (64.10%), Query Frame = 0


Query: 1   MSPPPYIAASPMPTNGFEAIFDDYEL--------LAAICFAIIVYFLSFTFYFKTGNNES 60
           M  PP  AASP P     AI   Y L        L AICF II+Y +   F+      +S
Sbjct: 1   MPLPPSFAASPPP---ISAIVKTYGLRWTNNNLALIAICFLIILYLILLNFF------KS 60

Query: 61  EVDTGT-VEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQW 120
           E+++G+     LPV RE EIV+IE  VFS YREA G  +D   EC ICL++FEDGQKC+ 
Sbjct: 61  ELESGSEPAGALPVVREPEIVRIEASVFS-YREADGGHDD---ECAICLDEFEDGQKCRK 120

Query: 121 MKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVVNP 148
           M KCGHIFHR CIDRWL+ +R CPLCRSCVCVVV+P
Sbjct: 121 MNKCGHIFHRRCIDRWLKVDRHCPLCRSCVCVVVHP 143

[Close]

BLAST of CSPI01G23040 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-12
Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 86  KGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCVVV 145
           KG    D  EC +CLN+FE+ +  + + KC H FH +CID WL + + CPLCR+ V ++ 
Sbjct: 125 KGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLIT 184

Query: 146 NP 148
            P
Sbjct: 185 EP 186

[Close]

BLAST of CSPI01G23040 vs. TAIR 10
Match: AT3G11110.1 (RING/U-box superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 2.9e-12
Identity = 38/120 (31.67%), Postives = 62/120 (51.67%), Query Frame = 0


Query: 28  AAICFAIIVYFLSFTFYFKTG--NNESEVDTGTVEDRLPVFREREI--VQIETMVFSYYR 87
           A   F+++++F   T Y        +S     +  DRL   R   +   +I ++     R
Sbjct: 36  ALALFSVVLFFALLTLYIHRNCLPRDSINLHASSPDRLTRCRSGGLDPAEIRSLPVVLCR 95

Query: 88  EAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTERECPLCRSCVCV 144
             + +E +++ EC ICL  FE+G+K + +  C H +H  C+DRWL+TE  CPLCR  + V
Sbjct: 96  RER-AEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRV 154

[Close]

BLAST of CSPI01G23040 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 3.8e-12
Identity = 42/141 (29.79%), Postives = 67/141 (47.52%), Query Frame = 0


Query: 9   ASPMPTN---GFEAIFDDYELLAAICFAIIVYFLSFTFYFK--TGNNESEVD-TGTVEDR 68
           + P PTN    +  +     ++  I  A + +   F+ YF+  +G  ++ V   G    R
Sbjct: 31  SQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGARSR 90

Query: 69  LPV---FREREIVQIETMVFSYYREAKGSE-NDDDYECVICLNKFEDGQKCQWMKKCGHI 128
             V    R  ++  +ET     Y + K  +    + EC ICLN+FED +  + + KC H+
Sbjct: 91  ATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHV 150

Query: 129 FHRSCIDRWLRTERECPLCRS 140
           FH  CID WL     CP+CR+
Sbjct: 151 FHPHCIDAWLEAHVTCPVCRA 171

[Close]

BLAST of CSPI01G23040 vs. TAIR 10
Match: AT3G61460.1 (brassinosteroid-responsive RING-H2 )

HSP 1 Score: 68.2 bits (165), Expect = 6.5e-12
Identity = 26/59 (44.07%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 82  YREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWL-RTERECPLCRS 140
           + E   S  D    C +CL +FE  Q+ +W++ C HIFHRSC+DRW+   ++ CPLCR+
Sbjct: 80  FEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQKTCPLCRT 138

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BLAST of CSPI01G23040 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 6.5e-12
Identity = 29/75 (38.67%), Postives = 44/75 (58.67%), Query Frame = 0


Query: 75  ETMV--FSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFHRSCIDRWLRTER 134
           E+M+   + Y+   G    D  +C +CL++FE+ +  + + KC H FH  CID WL++  
Sbjct: 119 ESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHS 178

Query: 135 ECPLCRSCVCVVVNP 148
            CPLCR+ V  V NP
Sbjct: 179 NCPLCRAFVTGVNNP 193

The following BLAST results are available for this feature:

BLAST of CSPI01G23040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRB7	1.8e-11	45.76	E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5....	[more]
Q9LX93	2.4e-11	43.55	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 ...	[more]
Q9SRM0	4.1e-11	31.67	RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1	[more]
Q8RXX9	5.3e-11	29.79	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]
Q9LF64	9.1e-11	38.67	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]

BLAST of CSPI01G23040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXE1	8.7e-81	97.96	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G515480 P...	[more]
A0A5D3BGV5	2.2e-60	75.63	RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3C6H7	2.2e-60	75.63	RING-H2 finger protein ATL66-like OS=Cucumis melo OX=3656 GN=LOC103497236 PE=4 S...	[more]
A0A5A7VPW6	2.9e-60	75.16	RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A6J1KAT3	5.7e-32	53.85	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111493250 P...	[more]

BLAST of CSPI01G23040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151032.1	1.8e-80	97.96	RING-H2 finger protein ATL66 [Cucumis sativus]	[more]
XP_008457571.1	4.6e-60	75.63	PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >TYJ97408.1 RING-H2 ...	[more]
KAA0067735.1	6.0e-60	75.16	RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa]	[more]
KAE8653246.1	1.9e-53	97.06	hypothetical protein Csa_019623 [Cucumis sativus]	[more]
XP_022998666.1	1.2e-31	53.85	RING-H2 finger protein ATL56-like [Cucurbita maxima]	[more]

BLAST of CSPI01G23040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10380.1	1.7e-12	43.55	RING/U-box superfamily protein	[more]
AT3G11110.1	2.9e-12	31.67	RING/U-box superfamily protein	[more]
AT3G05200.1	3.8e-12	29.79	RING/U-box superfamily protein	[more]
AT3G61460.1	6.5e-12	44.07	brassinosteroid-responsive RING-H2	[more]
AT5G17600.1	6.5e-12	38.67	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 96..137 e-value: 8.3E-7 score: 38.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 95..138 e-value: 2.8E-15 score: 56.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 96..138 score: 13.212175
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 56..142 e-value: 1.7E-19 score: 71.3
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 29..140
None	No IPR available	PANTHER	PTHR14155:SF550	RING-H2 FINGER PROTEIN ATL40	coord: 29..140
None	No IPR available	CDD	cd16448	RING-H2	coord: 96..138 e-value: 2.07485E-12 score: 56.3063
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 89..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G23040.1	CSPI01G23040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane