CSPI01G23030 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G23030
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	outer envelope pore protein 16, chloroplastic
Location	Chr1: 18706008 .. 18708372 (-)
RNA-Seq Expression	CSPI01G23030
Synteny	CSPI01G23030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACGCCAAATACTGGCCTCGGGCAACGCAAACAAAAAAAAGTTGAACTCGTCTCTTCTTCTTTAAGAATCCAATTAAATCAAAGATCCAAAAAGCCACTAAATTCCAAATTCATTTCGCATTTTAAGTACCCTCCAAAAATCTTGAACAATTTGTAGCGGCAAAAATCAGGAACGGCCCATTTCTACCACCATCCTCCACTTTCAATCCCTTCTCTCACACAATCTTTAGAACAACACCATGCCTCGCACCGGCTTCGTCGGCTCCTCATCGACCCCCAAGATCGATGTCGTCATCGATACGGGGCATCCCTTTCTCAATCTCACCGTCGATGGCTTCTTGAAGATCGGATCCGTATGTGTTTCTTGTTTTATATATTCTTGATTTTTTTTTTTTGTGTGTGTGTTTATTACGGCTACATTTGAAATGGGTTCTGTTCGTTTGGTTCTACTTTTCAGGTCGCTGCTACTCGAGCCGCTGCTGAGGATGCTTATCATGTTGTTAGAAAAGGTTTTGTTTTTCTCGCCTTTTCTGCGAAATTGGTTTCAATTTCTATCTTTCTTTACTGATTTTATGGCGTTGCTTTTGATTCTGTAGGAACAATTTCTACTCACAATTTTGAAAATACGGTTAGTATCTCTTGCTTCAGACTCAAGTTGTGGAGTCTGCCAGTTTATGGCTTTTGAGAATGAATGCTGAAATTTTCATTTTGAGAATGTTTATAATTAGGAACGGGATTTTTAATTAGTAGATTATATAGTTACCTCTATTTTTCTATTTGTTGCGGTAGTTTCTGTTTTGAATTATCTAACACCTAAGTTTAAAGTTCAGAGTTTACATAAATAAACCAACGTCACATCCAAATTAGATAAATATCAAAGGAATGCAGGTATAGTTCTTACCTCTGCCAACGGAGTGTAACTTTCTTTTCAATGGCTTACCCCTAGAAACTGTACAATTATGTGTGTTTAGCTTAACACAATTCTTTGTTGGGTGAATTTATGAGAATTTTTCAAAGAAGCATGTAAGTGAAGACAAAACACTTTGAAATGATTTGTGTTGGTTTGTGGGGATGTTGGGGATTCCAAATCTTGGGGCATTACAACCGGTATCTTTCAATCATTTAGATATAATACTGTTAAAGTTACAAAATGATTTGAAACTCCCATTGCACTTGGAAAAGCTACAAAATGATTATGCTGTTCTGTAAAACAGGCCTTGAAAGCTTAAAGCTTAAGTGAACTAGTAGGTTCTTGAACTTTAATATTACCTGCTTTTTGGTCTTTTGATCTATAAGAAAAATATTGAAATTTGAAATTGTTGTTACCCTCTGACTCTACTACCTCGTTCAGCTTATTAACTAATTGAACTTCTGTTGCAGTTGAAGAAAATGTGTAAAGAAGGTGCATATTGGGGTAAGTATGGATCCCATTACTGAAGTACTTAGCTTAGTGAATGAGTTTCAGCATCTATAAACCTCATGCTAATTTGAAAAGATCTTTCTTTTGAATCATTTTTTTTGGAAATTAACCTTATAGCTTTGAAAATGATTTTGAAAGTCGATTTGTAAATATGGAGAAGGCATATAATTGACCAACTGTTGTTTCGTTTGAACGCAGGAGCCGTAGCTGGAGCTTATGTTGGTATGGAGTATGGAGTAGAAAGGATTCGCGGCACAAGAGATTGGGTATGTTTTCTATTAATTGAAAGCCGTCCTTAAATCAAGTTCAAGCTATTCTGTTAGATTAGTGCTTCCAGCTCTCTATGTTTGTTTGGGAATATTTTCCATATATTCGAACATTTGTTTCCAGAAAAATGCAATGATTGGAGGTGCTTTGACGGGAGCTCTAGTATCAGCTGCGAGCAACAACAACCGAGACAAAGTTGTTATCGACGCAATTACAGGAGGAGCTGTTGCAACCGCTGCAGAGTTCATAAACTATCTTACTTGACACCGAGGTTTACCAAGCATTTTCATGTCCCGTTCCTTGTAAACCTCGAGCAAAAGGTATGGTGAATCATGCCCTGTTTATAAGAAATAACATCAGAATGTTAATGTAACAATATATTGAAACTTTTTTCATTTTGTTTTTGCAGAATAATCAGCTTTGTATGATTAGTCTCTCCTTAGAGTTGCAGCCTCAAAAATGTGAAGAAAAAGAGAAAATAGAGTAATACAAATATCTTATTTCTTCATTATGAGAGCCACATGTTTTGTTGAGGCTGTAATCGCAGCTGTAGTTTCATTGTTATAAGGTACAAAAGTATTGGTTAAGCTTTTAAGAAAGCGATTTTCCTTCCTTTTTGTCTTTTAAGCTTAACATAACATATTGACACCCAAGTCTGAATGAATCTATATATAACA

mRNA sequence

CAACGCCAAATACTGGCCTCGGGCAACGCAAACAAAAAAAAGTTGAACTCGTCTCTTCTTCTTTAAGAATCCAATTAAATCAAAGATCCAAAAAGCCACTAAATTCCAAATTCATTTCGCATTTTAAGTACCCTCCAAAAATCTTGAACAATTTGTAGCGGCAAAAATCAGGAACGGCCCATTTCTACCACCATCCTCCACTTTCAATCCCTTCTCTCACACAATCTTTAGAACAACACCATGCCTCGCACCGGCTTCGTCGGCTCCTCATCGACCCCCAAGATCGATGTCGTCATCGATACGGGGCATCCCTTTCTCAATCTCACCGTCGATGGCTTCTTGAAGATCGGATCCGTCGCTGCTACTCGAGCCGCTGCTGAGGATGCTTATCATGTTGTTAGAAAAGGAACAATTTCTACTCACAATTTTGAAAATACGTTGAAGAAAATGTGTAAAGAAGGTGCATATTGGGGAGCCGTAGCTGGAGCTTATGTTGGTATGGAGTATGGAGTAGAAAGGATTCGCGGCACAAGAGATTGGAAAAATGCAATGATTGGAGGTGCTTTGACGGGAGCTCTAGTATCAGCTGCGAGCAACAACAACCGAGACAAAGTTGTTATCGACGCAATTACAGGAGGAGCTGTTGCAACCGCTGCAGAGTTCATAAACTATCTTACTTGACACCGAGGTTTACCAAGCATTTTCATGTCCCGTTCCTTGTAAACCTCGAGCAAAAGAATAATCAGCTTTGTATGATTAGTCTCTCCTTAGAGTTGCAGCCTCAAAAATGTGAAGAAAAAGAGAAAATAGAGTAATACAAATATCTTATTTCTTCATTATGAGAGCCACATGTTTTGTTGAGGCTGTAATCGCAGCTGTAGTTTCATTGTTATAAGGTACAAAAGTATTGGTTAAGCTTTTAAGAAAGCGATTTTCCTTCCTTTTTGTCTTTTAAGCTTAACATAACATATTGACACCCAAGTCTGAATGAATCTATATATAACA

Coding sequence (CDS)

ATGCCTCGCACCGGCTTCGTCGGCTCCTCATCGACCCCCAAGATCGATGTCGTCATCGATACGGGGCATCCCTTTCTCAATCTCACCGTCGATGGCTTCTTGAAGATCGGATCCGTCGCTGCTACTCGAGCCGCTGCTGAGGATGCTTATCATGTTGTTAGAAAAGGAACAATTTCTACTCACAATTTTGAAAATACGTTGAAGAAAATGTGTAAAGAAGGTGCATATTGGGGAGCCGTAGCTGGAGCTTATGTTGGTATGGAGTATGGAGTAGAAAGGATTCGCGGCACAAGAGATTGGAAAAATGCAATGATTGGAGGTGCTTTGACGGGAGCTCTAGTATCAGCTGCGAGCAACAACAACCGAGACAAAGTTGTTATCGACGCAATTACAGGAGGAGCTGTTGCAACCGCTGCAGAGTTCATAAACTATCTTACTTGA

Protein sequence

MPRTGFVGSSSTPKIDVVIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISTHNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNNNRDKVVIDAITGGAVATAAEFINYLT*

Homology

[Close]

BLAST of CSPI01G23030 vs. ExPASy Swiss-Prot
Match: Q41050 (Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 1.9e-64
Identity = 114/146 (78.08%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPR+ F GS S+PK+DVVID G+PFLNLTVDGFLKIG+VAATR+ AED +H++RKG+IS+
Sbjct: 1   MPRSSFSGSLSSPKLDVVIDMGNPFLNLTVDGFLKIGAVAATRSVAEDTFHIIRKGSISS 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           ++FE +LKKMCKEGAYWGA+AG YVGMEYGVERIRGTRDWKNAM GGA+TGALVSAASNN
Sbjct: 61  NDFEKSLKKMCKEGAYWGAIAGVYVGMEYGVERIRGTRDWKNAMFGGAVTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
            +DK+ +DAITG A+ATAAEFINYLT
Sbjct: 121 KKDKIAVDAITGAAIATAAEFINYLT 146

[Close]

BLAST of CSPI01G23030 vs. ExPASy Swiss-Prot
Match: Q9ZV24 (Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP161 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.7e-47
Identity = 84/143 (58.74%), Postives = 109/143 (76.22%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MP + F G+ STPK+ V +D G+PFLNLTVD FLKIG+V  T++ AED Y  + KG++S 
Sbjct: 1   MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
              E+ LKK+CKEG YWGA  G Y+G EYG+ERIRG+RDWKNAM+ GA TGA++SA    
Sbjct: 61  STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120

Query: 121 NRDKVVIDAITGGAVATAAEFIN 144
            +D +VIDAI GGA+ATA++F+N
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143

[Close]

BLAST of CSPI01G23030 vs. ExPASy Swiss-Prot
Match: Q0WMZ5 (Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP162 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-15
Identity = 50/155 (32.26%), Postives = 73/155 (47.10%), Query Frame = 0


Query: 18  VIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGT---------------ISTHN 77
           + D GHP LN   D F+K   V A +A + +AY  V  G                   H 
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHR 80

Query: 78  FEN-----------TLKKMCKEGAYWGAVAGAYVGMEYGVERIR-GTRDWKNAMIGGALT 137
           F N            +K   KE   WG  AG Y G+ YG+  +R G  DW+N+ + GALT
Sbjct: 81  FPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALT 140

Query: 138 GA--LVSAASNNNRDKVVIDAITGGAVATAAEFIN 144
           GA   ++ +   + ++VV  A+TG A++TAA  ++
Sbjct: 141 GAAMAMTTSERTSHEQVVQSALTGAAISTAANLLS 175

[Close]

BLAST of CSPI01G23030 vs. ExPASy Swiss-Prot
Match: Q9LZH8 (Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP164 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-05
Identity = 32/100 (32.00%), Postives = 52/100 (52.00%), Query Frame = 0


Query: 24  PFLNLTVDGFLKI---GSVAATRAAAEDAYHVVRKGTISTHNFENTLKKMCKEGAYWGAV 83
           P  +LTV+  L++   G +    A   DA  +   G +S  +F    K + + G   G V
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSG-VSQASF--VAKSIGRFGFQCGLV 69

Query: 84  AGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 121
           +G +     G++R RG  DW NA++GGA+ GA V+ ++ N
Sbjct: 70  SGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRN 106

[Close]

BLAST of CSPI01G23030 vs. ExPASy TrEMBL
Match: A0A5D3BDN0 (Outer envelope pore protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002350 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.0e-73
Identity = 140/146 (95.89%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGS STPK+DVVID G+PFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMC EGAYWGAVAGAYVGMEYGVER+RGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTLKKMCTEGAYWGAVAGAYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CSPI01G23030 vs. ExPASy TrEMBL
Match: A0A1S3C572 (outer envelope pore protein 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497163 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.0e-73
Identity = 140/146 (95.89%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGS STPK+DVVID G+PFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMC EGAYWGAVAGAYVGMEYGVER+RGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTLKKMCTEGAYWGAVAGAYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CSPI01G23030 vs. ExPASy TrEMBL
Match: A0A6J1HZI5 (outer envelope pore protein 16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111469516 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.7e-71
Identity = 135/146 (92.47%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGS STPK+DVVID G+PFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIS+
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMCKEGAYWG VAG YVGMEYGVERIRG RDWKNAMIGGALTGA+VSAASN+
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CSPI01G23030 vs. ExPASy TrEMBL
Match: A0A6J1HJY9 (outer envelope pore protein 16, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464797 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.7e-71
Identity = 135/146 (92.47%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGS STPK+DVVID G+PFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIS+
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMCKEGAYWG VAG YVGMEYGVERIRG RDWKNAMIGGALTGA+VSAASN+
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CSPI01G23030 vs. ExPASy TrEMBL
Match: A0A5A7VKK1 (Outer envelope pore protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00490 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66
Identity = 132/146 (90.41%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGS STPK+DVVID G+PFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENT+   C     W AVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTVSISCFRLKLWRAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CSPI01G23030 vs. NCBI nr
Match: XP_008457483.1 (PREDICTED: outer envelope pore protein 16, chloroplastic [Cucumis melo] >TYJ97413.1 outer envelope pore protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 284.3 bits (726), Expect = 6.1e-73
Identity = 140/146 (95.89%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGS STPK+DVVID G+PFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMC EGAYWGAVAGAYVGMEYGVER+RGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTLKKMCTEGAYWGAVAGAYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CSPI01G23030 vs. NCBI nr
Match: XP_038893818.1 (outer envelope pore protein 16, chloroplastic [Benincasa hispida])

HSP 1 Score: 282.7 bits (722), Expect = 1.8e-72
Identity = 137/146 (93.84%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGF+GS STPK+DVVID G+PFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFIGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMCKEGAYWG VAG YVGMEYGVER+RGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CSPI01G23030 vs. NCBI nr
Match: XP_011658142.1 (outer envelope pore protein 16, chloroplastic [Cucumis sativus] >KAE8653245.1 hypothetical protein Csa_019696 [Cucumis sativus])

HSP 1 Score: 277.3 bits (708), Expect = 7.5e-71
Identity = 138/146 (94.52%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MP TGFVGSSSTPKIDVVIDTG+PFLNLTVDGFLKIGSVAATRAAAEDAY VV+ G IS+
Sbjct: 1   MPPTGFVGSSSTPKIDVVIDTGYPFLNLTVDGFLKIGSVAATRAAAEDAYFVVKNGAISS 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           H FENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HKFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CSPI01G23030 vs. NCBI nr
Match: XP_022964801.1 (outer envelope pore protein 16, chloroplastic [Cucurbita moschata] >XP_022970582.1 outer envelope pore protein 16, chloroplastic [Cucurbita maxima] >XP_023519566.1 outer envelope pore protein 16, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6583432.1 Outer envelope pore protein 16, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276.9 bits (707), Expect = 9.8e-71
Identity = 135/146 (92.47%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGS STPK+DVVID G+PFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIS+
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENTLKKMCKEGAYWG VAG YVGMEYGVERIRG RDWKNAMIGGALTGA+VSAASN+
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CSPI01G23030 vs. NCBI nr
Match: KAA0067730.1 (outer envelope pore protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 261.5 bits (667), Expect = 4.3e-66
Identity = 132/146 (90.41%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MPRTGFVGS STPK+DVVID G+PFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
           HNFENT+   C     W AVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN
Sbjct: 61  HNFENTVSISCFRLKLWRAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKVVIDAITGGAVATAAEFINYLT 147
           NRDKVVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CSPI01G23030 vs. TAIR 10
Match: AT2G28900.1 (outer plastid envelope protein 16-1 )

HSP 1 Score: 189.5 bits (480), Expect = 1.9e-48
Identity = 84/143 (58.74%), Postives = 109/143 (76.22%), Query Frame = 0


Query: 1   MPRTGFVGSSSTPKIDVVIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60
           MP + F G+ STPK+ V +D G+PFLNLTVD FLKIG+V  T++ AED Y  + KG++S 
Sbjct: 1   MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60

Query: 61  HNFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120
              E+ LKK+CKEG YWGA  G Y+G EYG+ERIRG+RDWKNAM+ GA TGA++SA    
Sbjct: 61  STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120

Query: 121 NRDKVVIDAITGGAVATAAEFIN 144
            +D +VIDAI GGA+ATA++F+N
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143

[Close]

BLAST of CSPI01G23030 vs. TAIR 10
Match: AT4G16160.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 85.5 bits (210), Expect = 3.9e-17
Identity = 51/153 (33.33%), Postives = 74/153 (48.37%), Query Frame = 0


Query: 18  VIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST-------------HNFE 77
           + D GHP LN   D F+K   V A +A + +AY  V  G  S              H F 
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGFDSNNVGPPSEITGNKKHRFP 80

Query: 78  N-----------TLKKMCKEGAYWGAVAGAYVGMEYGVERIR-GTRDWKNAMIGGALTGA 137
           N            +K   KE   WG  AG Y G+ YG+  +R G  DW+N+ + GALTGA
Sbjct: 81  NLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALTGA 140

Query: 138 --LVSAASNNNRDKVVIDAITGGAVATAAEFIN 144
              ++ +   + ++VV  A+TG A++TAA  ++
Sbjct: 141 AMAMTTSERTSHEQVVQSALTGAAISTAANLLS 173

[Close]

BLAST of CSPI01G23030 vs. TAIR 10
Match: AT4G16160.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-16
Identity = 50/155 (32.26%), Postives = 73/155 (47.10%), Query Frame = 0


Query: 18  VIDTGHPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGT---------------ISTHN 77
           + D GHP LN   D F+K   V A +A + +AY  V  G                   H 
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHR 80

Query: 78  FEN-----------TLKKMCKEGAYWGAVAGAYVGMEYGVERIR-GTRDWKNAMIGGALT 137
           F N            +K   KE   WG  AG Y G+ YG+  +R G  DW+N+ + GALT
Sbjct: 81  FPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALT 140

Query: 138 GA--LVSAASNNNRDKVVIDAITGGAVATAAEFIN 144
           GA   ++ +   + ++VV  A+TG A++TAA  ++
Sbjct: 141 GAAMAMTTSERTSHEQVVQSALTGAAISTAANLLS 175

[Close]

BLAST of CSPI01G23030 vs. TAIR 10
Match: AT3G62880.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 32/100 (32.00%), Postives = 52/100 (52.00%), Query Frame = 0


Query: 24  PFLNLTVDGFLKI---GSVAATRAAAEDAYHVVRKGTISTHNFENTLKKMCKEGAYWGAV 83
           P  +LTV+  L++   G +    A   DA  +   G +S  +F    K + + G   G V
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSG-VSQASF--VAKSIGRFGFQCGLV 69

Query: 84  AGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 121
           +G +     G++R RG  DW NA++GGA+ GA V+ ++ N
Sbjct: 70  SGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRN 106

[Close]

BLAST of CSPI01G23030 vs. TAIR 10
Match: AT3G62880.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 32/100 (32.00%), Postives = 52/100 (52.00%), Query Frame = 0


Query: 24  PFLNLTVDGFLKI---GSVAATRAAAEDAYHVVRKGTISTHNFENTLKKMCKEGAYWGAV 83
           P  +LTV+  L++   G +    A   DA  +   G +S  +F    K + + G   G V
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSG-VSQASF--VAKSIGRFGFQCGLV 69

Query: 84  AGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 121
           +G +     G++R RG  DW NA++GGA+ GA V+ ++ N
Sbjct: 70  SGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRN 106

The following BLAST results are available for this feature:

BLAST of CSPI01G23030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41050	1.9e-64	78.08	Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 ...	[more]
Q9ZV24	2.7e-47	58.74	Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q0WMZ5	2.1e-15	32.26	Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LZH8	1.5e-05	32.00	Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CSPI01G23030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BDN0	3.0e-73	95.89	Outer envelope pore protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C572	3.0e-73	95.89	outer envelope pore protein 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1HZI5	4.7e-71	92.47	outer envelope pore protein 16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HJY9	4.7e-71	92.47	outer envelope pore protein 16, chloroplastic OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5A7VKK1	2.1e-66	90.41	Outer envelope pore protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of CSPI01G23030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457483.1	6.1e-73	95.89	PREDICTED: outer envelope pore protein 16, chloroplastic [Cucumis melo] >TYJ9741...	[more]
XP_038893818.1	1.8e-72	93.84	outer envelope pore protein 16, chloroplastic [Benincasa hispida]	[more]
XP_011658142.1	7.5e-71	94.52	outer envelope pore protein 16, chloroplastic [Cucumis sativus] >KAE8653245.1 hy...	[more]
XP_022964801.1	9.8e-71	92.47	outer envelope pore protein 16, chloroplastic [Cucurbita moschata] >XP_022970582...	[more]
KAA0067730.1	4.3e-66	90.41	outer envelope pore protein 16 [Cucumis melo var. makuwa]	[more]

BLAST of CSPI01G23030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28900.1	1.9e-48	58.74	outer plastid envelope protein 16-1	[more]
AT4G16160.1	3.9e-17	33.33	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT4G16160.2	1.5e-16	32.26	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.1	1.1e-06	32.00	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.2	1.1e-06	32.00	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 59..135 e-value: 1.1E-11 score: 45.2
None	No IPR available	PANTHER	PTHR15371:SF2	OUTER ENVELOPE PORE PROTEIN 16-1, CHLOROPLASTIC	coord: 1..144
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 1..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G23030.1	CSPI01G23030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0003333	amino acid transmembrane transport
biological_process	GO:0006811	ion transport
biological_process	GO:0045037	protein import into chloroplast stroma
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0034426	etioplast membrane
cellular_component	GO:0046930	pore complex
molecular_function	GO:0015171	amino acid transmembrane transporter activity
molecular_function	GO:0015288	porin activity
molecular_function	GO:0042803	protein homodimerization activity