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CSPI01G22970 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCCTCTCTCTAAATCTCTCAATTTTTTTTTTAAATTAAAAAAAAAAATCCATGCACCTATAATTATTATTTGAATTGAAAATGGGTCTCTTCAATTCAAGTATTTTGCTCTCGGAAAATGATGTAAACTCCATGGAATTCACTTTTCTTTTGAGATATGTCAACTCCAAAGAAGATGATCAAGAAGAAGATGGACAAGAGGAGACATTAAATGGAGGAAGAAGCAACTCAGTTGAAGATGATGATAATGGGTTCAAAACTCCAACATCTTTGGAGCATAAAATTCCCACAAGTCTTCAGTGTCCGATGGCGCCGAGGAAACCAAAACCTCGACGGTTGACGAAGCGGAAGGCCGTGGAACGACACCGGTTGTTGCTGGATCTGTCCTCTGAGATTCAGTCTTTGTTTCCAGCTGAGTTTCTTGTAGGCCTTGGTGGTAAGATCAAGAGGGTTAGACAATAAAAGAAACTGAAAAAAACTTTGATCCATAACTTTTTACATAAAAAGATATGTACTGTACTACCTATTTTTCTTTTTCTTTTCTTTTGGGTTTTCTCAGTTCTTAAAATTGATATTGTAGAAATTAATATCTGTGCTTAGATAATGATCTTCCCTCCGGCTGACTCTCTTCTCCGGCAGCGGCGAGGTGCAAC CTCCTCTCTCTAAATCTCTCAATTTTTTTTTTAAATTAAAAAAAAAAATCCATGCACCTATAATTATTATTTGAATTGAAAATGGGTCTCTTCAATTCAAGTATTTTGCTCTCGGAAAATGATGTAAACTCCATGGAATTCACTTTTCTTTTGAGATATGTCAACTCCAAAGAAGATGATCAAGAAGAAGATGGACAAGAGGAGACATTAAATGGAGGAAGAAGCAACTCAGTTGAAGATGATGATAATGGGTTCAAAACTCCAACATCTTTGGAGCATAAAATTCCCACAAGTCTTCAGTGTCCGATGGCGCCGAGGAAACCAAAACCTCGACGGTTGACGAAGCGGAAGGCCGTGGAACGACACCGGTTGTTGCTGGATCTGTCCTCTGAGATTCAGTCTTTGTTTCCAGCTGAGTTTCTTGTAGGCCTTGGTGGTAAGATCAAGAGGGTTAGACAATAAAAGAAACTGAAAAAAACTTTGATCCATAACTTTTTACATAAAAAGATATGTACTGTACTACCTATTTTTCTTTTTCTTTTCTTTTGGGTTTTCTCAGTTCTTAAAATTGATATTGTAGAAATTAATATCTGTGCTTAGATAATGATCTTCCCTCCGGCTGACTCTCTTCTCCGGCAGCGGCGAGGTGCAAC ATGGGTCTCTTCAATTCAAGTATTTTGCTCTCGGAAAATGATGTAAACTCCATGGAATTCACTTTTCTTTTGAGATATGTCAACTCCAAAGAAGATGATCAAGAAGAAGATGGACAAGAGGAGACATTAAATGGAGGAAGAAGCAACTCAGTTGAAGATGATGATAATGGGTTCAAAACTCCAACATCTTTGGAGCATAAAATTCCCACAAGTCTTCAGTGTCCGATGGCGCCGAGGAAACCAAAACCTCGACGGTTGACGAAGCGGAAGGCCGTGGAACGACACCGGTTGTTGCTGGATCTGTCCTCTGAGATTCAGTCTTTGTTTCCAGCTGAGTTTCTTGTAGGCCTTGGTGGTAAGATCAAGAGGGTTAGACAATAA MGLFNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDGQEETLNGGRSNSVEDDDNGFKTPTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGGKIKRVRQ* Homology
BLAST of CSPI01G22970 vs. ExPASy Swiss-Prot
Match: Q9LZ60 (Cyclin-dependent protein kinase inhibitor SMR3 OS=Arabidopsis thaliana OX=3702 GN=SMR3 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 5.4e-04 Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = 0
BLAST of CSPI01G22970 vs. ExPASy TrEMBL
Match: A0A0A0LY05 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G506960 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.3e-61 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of CSPI01G22970 vs. ExPASy TrEMBL
Match: A0A5A7VIY0 (Cyclin-dependent protein kinase inhibitor SMR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold710G00040 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 4.1e-55 Identity = 118/128 (92.19%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of CSPI01G22970 vs. ExPASy TrEMBL
Match: A0A1S4E1K5 (cyclin-dependent protein kinase inhibitor SMR3-like OS=Cucumis melo OX=3656 GN=LOC107991540 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 4.1e-55 Identity = 118/128 (92.19%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of CSPI01G22970 vs. ExPASy TrEMBL
Match: A0A660KRH4 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_011491 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 6.0e-22 Identity = 69/145 (47.59%), Postives = 95/145 (65.52%), Query Frame = 0
BLAST of CSPI01G22970 vs. ExPASy TrEMBL
Match: A0A7N2KPB5 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.5e-20 Identity = 74/162 (45.68%), Postives = 93/162 (57.41%), Query Frame = 0
BLAST of CSPI01G22970 vs. NCBI nr
Match: XP_011658114.1 (cyclin-dependent protein kinase inhibitor SMR3 [Cucumis sativus] >KGN65712.1 hypothetical protein Csa_019570 [Cucumis sativus]) HSP 1 Score: 244.6 bits (623), Expect = 4.6e-61 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of CSPI01G22970 vs. NCBI nr
Match: XP_016902107.1 (PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo] >KAA0067708.1 cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo var. makuwa] >TYK21932.1 cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo var. makuwa]) HSP 1 Score: 223.8 bits (569), Expect = 8.5e-55 Identity = 118/128 (92.19%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of CSPI01G22970 vs. NCBI nr
Match: KAG7036922.1 (hypothetical protein SDJN02_00542, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 166.8 bits (421), Expect = 1.2e-37 Identity = 89/124 (71.77%), Postives = 101/124 (81.45%), Query Frame = 0
BLAST of CSPI01G22970 vs. NCBI nr
Match: KAG6607237.1 (hypothetical protein SDJN03_00579, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 161.4 bits (407), Expect = 5.2e-36 Identity = 87/119 (73.11%), Postives = 96/119 (80.67%), Query Frame = 0
BLAST of CSPI01G22970 vs. NCBI nr
Match: KAE8039043.1 (hypothetical protein FH972_011491 [Carpinus fangiana]) HSP 1 Score: 113.6 bits (283), Expect = 1.2e-21 Identity = 69/145 (47.59%), Postives = 95/145 (65.52%), Query Frame = 0
BLAST of CSPI01G22970 vs. TAIR 10
Match: AT5G02420.1 (unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 3.9e-05 Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = 0
BLAST of CSPI01G22970 vs. TAIR 10
Match: AT5G59360.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 8.6e-05 Identity = 30/98 (30.61%), Postives = 50/98 (51.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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