CSPI01G22970 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G22970
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	cyclin-dependent protein kinase inhibitor SMR3-like
Location	Chr1: 18630149 .. 18630801 (-)
RNA-Seq Expression	CSPI01G22970
Synteny	CSPI01G22970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTCTCTCTAAATCTCTCAATTTTTTTTTTAAATTAAAAAAAAAAATCCATGCACCTATAATTATTATTTGAATTGAAAATGGGTCTCTTCAATTCAAGTATTTTGCTCTCGGAAAATGATGTAAACTCCATGGAATTCACTTTTCTTTTGAGATATGTCAACTCCAAAGAAGATGATCAAGAAGAAGATGGACAAGAGGAGACATTAAATGGAGGAAGAAGCAACTCAGTTGAAGATGATGATAATGGGTTCAAAACTCCAACATCTTTGGAGCATAAAATTCCCACAAGTCTTCAGTGTCCGATGGCGCCGAGGAAACCAAAACCTCGACGGTTGACGAAGCGGAAGGCCGTGGAACGACACCGGTTGTTGCTGGATCTGTCCTCTGAGATTCAGTCTTTGTTTCCAGCTGAGTTTCTTGTAGGCCTTGGTGGTAAGATCAAGAGGGTTAGACAATAAAAGAAACTGAAAAAAACTTTGATCCATAACTTTTTACATAAAAAGATATGTACTGTACTACCTATTTTTCTTTTTCTTTTCTTTTGGGTTTTCTCAGTTCTTAAAATTGATATTGTAGAAATTAATATCTGTGCTTAGATAATGATCTTCCCTCCGGCTGACTCTCTTCTCCGGCAGCGGCGAGGTGCAAC

mRNA sequence

CTCCTCTCTCTAAATCTCTCAATTTTTTTTTTAAATTAAAAAAAAAAATCCATGCACCTATAATTATTATTTGAATTGAAAATGGGTCTCTTCAATTCAAGTATTTTGCTCTCGGAAAATGATGTAAACTCCATGGAATTCACTTTTCTTTTGAGATATGTCAACTCCAAAGAAGATGATCAAGAAGAAGATGGACAAGAGGAGACATTAAATGGAGGAAGAAGCAACTCAGTTGAAGATGATGATAATGGGTTCAAAACTCCAACATCTTTGGAGCATAAAATTCCCACAAGTCTTCAGTGTCCGATGGCGCCGAGGAAACCAAAACCTCGACGGTTGACGAAGCGGAAGGCCGTGGAACGACACCGGTTGTTGCTGGATCTGTCCTCTGAGATTCAGTCTTTGTTTCCAGCTGAGTTTCTTGTAGGCCTTGGTGGTAAGATCAAGAGGGTTAGACAATAAAAGAAACTGAAAAAAACTTTGATCCATAACTTTTTACATAAAAAGATATGTACTGTACTACCTATTTTTCTTTTTCTTTTCTTTTGGGTTTTCTCAGTTCTTAAAATTGATATTGTAGAAATTAATATCTGTGCTTAGATAATGATCTTCCCTCCGGCTGACTCTCTTCTCCGGCAGCGGCGAGGTGCAAC

Coding sequence (CDS)

ATGGGTCTCTTCAATTCAAGTATTTTGCTCTCGGAAAATGATGTAAACTCCATGGAATTCACTTTTCTTTTGAGATATGTCAACTCCAAAGAAGATGATCAAGAAGAAGATGGACAAGAGGAGACATTAAATGGAGGAAGAAGCAACTCAGTTGAAGATGATGATAATGGGTTCAAAACTCCAACATCTTTGGAGCATAAAATTCCCACAAGTCTTCAGTGTCCGATGGCGCCGAGGAAACCAAAACCTCGACGGTTGACGAAGCGGAAGGCCGTGGAACGACACCGGTTGTTGCTGGATCTGTCCTCTGAGATTCAGTCTTTGTTTCCAGCTGAGTTTCTTGTAGGCCTTGGTGGTAAGATCAAGAGGGTTAGACAATAA

Protein sequence

MGLFNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDGQEETLNGGRSNSVEDDDNGFKTPTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGGKIKRVRQ*

Homology

[Close]

BLAST of CSPI01G22970 vs. ExPASy Swiss-Prot
Match: Q9LZ60 (Cyclin-dependent protein kinase inhibitor SMR3 OS=Arabidopsis thaliana OX=3702 GN=SMR3 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 5.4e-04
Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = 0


Query: 32  DDQEEDGQEETLNGGRSNSVEDDDNGFKTPTSLEHKIP--TSLQCPMAPRKPKPRRL--T 91
           D  + D ++ T+N         ++ G KTPTS +HKIP      CP APRKPKP R   T
Sbjct: 27  DIPDSDHEDPTVN---------EEEGCKTPTSSDHKIPEVKYTLCPPAPRKPKPNRSSGT 86

Query: 92  KRKAVE---RHRLLLDLSSEIQSLF 110
           KRK       +R+ +DLS EI+  F
Sbjct: 87  KRKLTPVNVVNRIPIDLSREIEMFF 102

[Close]

BLAST of CSPI01G22970 vs. ExPASy TrEMBL
Match: A0A0A0LY05 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G506960 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.3e-61
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MGLFNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDGQEETLNGGRSNSVEDDDNGFKT 60
           MGLFNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDGQEETLNGGRSNSVEDDDNGFKT
Sbjct: 1   MGLFNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDGQEETLNGGRSNSVEDDDNGFKT 60

Query: 61  PTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGGK 120
           PTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGGK
Sbjct: 61  PTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGGK 120

Query: 121 IKRVRQ 127
           IKRVRQ
Sbjct: 121 IKRVRQ 126

[Close]

BLAST of CSPI01G22970 vs. ExPASy TrEMBL
Match: A0A5A7VIY0 (Cyclin-dependent protein kinase inhibitor SMR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold710G00040 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.1e-55
Identity = 118/128 (92.19%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MGL--FNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDGQEETLNGGRSNSVEDDDNGF 60
           MGL  FNSSILLSENDVNSMEFTFLLRYVNSKEDDQEED QEETLNG  ++ V+DDDNGF
Sbjct: 1   MGLFDFNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGF 60

Query: 61  KTPTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLG 120
           KTPTSLEHKIPTS+QCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLG
Sbjct: 61  KTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLG 120

Query: 121 GKIKRVRQ 127
           GKIKRVRQ
Sbjct: 121 GKIKRVRQ 128

[Close]

BLAST of CSPI01G22970 vs. ExPASy TrEMBL
Match: A0A1S4E1K5 (cyclin-dependent protein kinase inhibitor SMR3-like OS=Cucumis melo OX=3656 GN=LOC107991540 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.1e-55
Identity = 118/128 (92.19%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MGL--FNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDGQEETLNGGRSNSVEDDDNGF 60
           MGL  FNSSILLSENDVNSMEFTFLLRYVNSKEDDQEED QEETLNG  ++ V+DDDNGF
Sbjct: 1   MGLFDFNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGF 60

Query: 61  KTPTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLG 120
           KTPTSLEHKIPTS+QCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLG
Sbjct: 61  KTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLG 120

Query: 121 GKIKRVRQ 127
           GKIKRVRQ
Sbjct: 121 GKIKRVRQ 128

[Close]

BLAST of CSPI01G22970 vs. ExPASy TrEMBL
Match: A0A660KRH4 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_011491 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 6.0e-22
Identity = 69/145 (47.59%), Postives = 95/145 (65.52%), Query Frame = 0


Query: 1   MGLFNSSILLSENDVNSMEFTFLL-------------RYVNSKEDDQEEDGQEETLN--- 60
           MG+ +S + LSE D+N+MEF FL+               V  +E+++EE+ +++ +N   
Sbjct: 11  MGVSDSQMFLSEKDLNAMEFNFLVPPTLEFQEDHGKPEVVKQEEEEEEENKKKKKINIPS 70

Query: 61  --GGRSNSVEDDDNGFKTPTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLS 120
              G    VEDD++GFKTPTSL+HKIP  LQCP APRKPK   LTKRKA  R R+LLDLS
Sbjct: 71  VTVGEFRDVEDDEDGFKTPTSLDHKIPAILQCPPAPRKPKTIPLTKRKAA-RQRILLDLS 130

Query: 121 SEIQSLFPAEFLVGLG-GKIKRVRQ 127
           ++I++LFP   L  L  GKIK++R+
Sbjct: 131 NDIEALFPQALLEDLSRGKIKKIRK 154

[Close]

BLAST of CSPI01G22970 vs. ExPASy TrEMBL
Match: A0A7N2KPB5 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.5e-20
Identity = 74/162 (45.68%), Postives = 93/162 (57.41%), Query Frame = 0


Query: 1   MGLFNSSILLSENDVNSMEFTFLLRYV------------NSKEDD---------QEEDGQ 60
           MG+ +S + L+E D+NSME  FL+R                +E+D         +EE+ Q
Sbjct: 11  MGVSDSQMFLTEKDLNSMELNFLVRPTLDFQDQCPTAPSEEEEEDHELFKRPEVKEEEKQ 70

Query: 61  EETLNG---------------GRSNSVEDDDNGFKTPTSLEHKIPTSLQCPMAPRKPKPR 120
           EE  +                G    VEDDD+GF+TPTSL+HKIP SLQCP APRKPKP 
Sbjct: 71  EEEEDKCKISVSSLEVKVPSLGELRDVEDDDDGFRTPTSLDHKIPDSLQCPPAPRKPKPI 130

Query: 121 RLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGGKIKRVRQ 127
             TKRKA  R R++LDLS+EI SLFP   LV L  KIKR+R+
Sbjct: 131 PSTKRKA-GRRRIMLDLSNEIDSLFPPALLVDLRVKIKRIRR 171

[Close]

BLAST of CSPI01G22970 vs. NCBI nr
Match: XP_011658114.1 (cyclin-dependent protein kinase inhibitor SMR3 [Cucumis sativus] >KGN65712.1 hypothetical protein Csa_019570 [Cucumis sativus])

HSP 1 Score: 244.6 bits (623), Expect = 4.6e-61
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MGLFNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDGQEETLNGGRSNSVEDDDNGFKT 60
           MGLFNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDGQEETLNGGRSNSVEDDDNGFKT
Sbjct: 1   MGLFNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDGQEETLNGGRSNSVEDDDNGFKT 60

Query: 61  PTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGGK 120
           PTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGGK
Sbjct: 61  PTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGGK 120

Query: 121 IKRVRQ 127
           IKRVRQ
Sbjct: 121 IKRVRQ 126

[Close]

BLAST of CSPI01G22970 vs. NCBI nr
Match: XP_016902107.1 (PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo] >KAA0067708.1 cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo var. makuwa] >TYK21932.1 cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo var. makuwa])

HSP 1 Score: 223.8 bits (569), Expect = 8.5e-55
Identity = 118/128 (92.19%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MGL--FNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDGQEETLNGGRSNSVEDDDNGF 60
           MGL  FNSSILLSENDVNSMEFTFLLRYVNSKEDDQEED QEETLNG  ++ V+DDDNGF
Sbjct: 1   MGLFDFNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDRQEETLNGRSNSVVQDDDNGF 60

Query: 61  KTPTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLG 120
           KTPTSLEHKIPTS+QCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLG
Sbjct: 61  KTPTSLEHKIPTSIQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLG 120

Query: 121 GKIKRVRQ 127
           GKIKRVRQ
Sbjct: 121 GKIKRVRQ 128

[Close]

BLAST of CSPI01G22970 vs. NCBI nr
Match: KAG7036922.1 (hypothetical protein SDJN02_00542, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-37
Identity = 89/124 (71.77%), Postives = 101/124 (81.45%), Query Frame = 0


Query: 1   MGLFNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDGQEETLNGGRSNSVEDDDNGFKT 60
           M LFNS+ILLSENDV++MEFTFLL Y+ SK  D + D +        S SV+DDDNGFKT
Sbjct: 1   MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHE--------SKSVQDDDNGFKT 60

Query: 61  PTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGGK 120
           PTSLEHKIP SL+CPMAPRKPK R + KRKAVER RL LDLSSEIQSLFPA+FLVGLGGK
Sbjct: 61  PTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGLGGK 116

Query: 121 IKRV 125
           +KR+
Sbjct: 121 MKRL 116

[Close]

BLAST of CSPI01G22970 vs. NCBI nr
Match: KAG6607237.1 (hypothetical protein SDJN03_00579, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 161.4 bits (407), Expect = 5.2e-36
Identity = 87/119 (73.11%), Postives = 96/119 (80.67%), Query Frame = 0


Query: 1   MGLFNSSILLSENDVNSMEFTFLLRYVNSKEDDQEEDGQEETLNGGRSNSVEDDDNGFKT 60
           M LFNS+ILLSENDV++MEFTFLL Y+ SK  D + D +        S SVEDDDNGFKT
Sbjct: 1   MALFNSTILLSENDVSAMEFTFLLTYLTSKHQDHDLDHE--------SKSVEDDDNGFKT 60

Query: 61  PTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLSSEIQSLFPAEFLVGLGG 120
           PTSLEHKIP SL+CPMAPRKPK R + KRKAVER RL LDLSSEIQSLFPA+FLVGLGG
Sbjct: 61  PTSLEHKIPASLRCPMAPRKPKSRPMMKRKAVERQRLFLDLSSEIQSLFPADFLVGLGG 111

[Close]

BLAST of CSPI01G22970 vs. NCBI nr
Match: KAE8039043.1 (hypothetical protein FH972_011491 [Carpinus fangiana])

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-21
Identity = 69/145 (47.59%), Postives = 95/145 (65.52%), Query Frame = 0


Query: 1   MGLFNSSILLSENDVNSMEFTFLL-------------RYVNSKEDDQEEDGQEETLN--- 60
           MG+ +S + LSE D+N+MEF FL+               V  +E+++EE+ +++ +N   
Sbjct: 11  MGVSDSQMFLSEKDLNAMEFNFLVPPTLEFQEDHGKPEVVKQEEEEEEENKKKKKINIPS 70

Query: 61  --GGRSNSVEDDDNGFKTPTSLEHKIPTSLQCPMAPRKPKPRRLTKRKAVERHRLLLDLS 120
              G    VEDD++GFKTPTSL+HKIP  LQCP APRKPK   LTKRKA  R R+LLDLS
Sbjct: 71  VTVGEFRDVEDDEDGFKTPTSLDHKIPAILQCPPAPRKPKTIPLTKRKAA-RQRILLDLS 130

Query: 121 SEIQSLFPAEFLVGLG-GKIKRVRQ 127
           ++I++LFP   L  L  GKIK++R+
Sbjct: 131 NDIEALFPQALLEDLSRGKIKKIRK 154

[Close]

BLAST of CSPI01G22970 vs. TAIR 10
Match: AT5G02420.1 (unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 3.9e-05
Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = 0


Query: 32  DDQEEDGQEETLNGGRSNSVEDDDNGFKTPTSLEHKIP--TSLQCPMAPRKPKPRRL--T 91
           D  + D ++ T+N         ++ G KTPTS +HKIP      CP APRKPKP R   T
Sbjct: 27  DIPDSDHEDPTVN---------EEEGCKTPTSSDHKIPEVKYTLCPPAPRKPKPNRSSGT 86

Query: 92  KRKAVE---RHRLLLDLSSEIQSLF 110
           KRK       +R+ +DLS EI+  F
Sbjct: 87  KRKLTPVNVVNRIPIDLSREIEMFF 102

[Close]

BLAST of CSPI01G22970 vs. TAIR 10
Match: AT5G59360.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 8.6e-05
Identity = 30/98 (30.61%), Postives = 50/98 (51.02%), Query Frame = 0


Query: 30  KEDDQEEDGQEETLNGGRSNSVEDDDNGFKTPTSLEHKIPTSLQCPMAPRKPKPRRLTKR 89
           ++ DQE +  ++   G R    +D+++  K P +  +        P  PRKPK     KR
Sbjct: 56  RQQDQELENLQDGSRGKRKWECKDEESPVKIPETPRNSNSVCYCPPRPPRKPKAIPSMKR 115

Query: 90  KA--VERHRLLLDLSSEIQSLFPAEFLVGLGGKIKRVR 126
           +   V+R  + LD++ E++S+FP   L   G KIK+ R
Sbjct: 116 RGMWVKRSVVFLDVAREVESMFPPSVLQDFGKKIKKAR 153

The following BLAST results are available for this feature:

BLAST of CSPI01G22970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZ60	5.4e-04	41.18	Cyclin-dependent protein kinase inhibitor SMR3 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CSPI01G22970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY05	2.3e-61	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G506960 PE=4 SV=1	[more]
A0A5A7VIY0	4.1e-55	92.19	Cyclin-dependent protein kinase inhibitor SMR3-like OS=Cucumis melo var. makuwa ...	[more]
A0A1S4E1K5	4.1e-55	92.19	cyclin-dependent protein kinase inhibitor SMR3-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A660KRH4	6.0e-22	47.59	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_011491 PE=4 SV=1	[more]
A0A7N2KPB5	1.5e-20	45.68	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of CSPI01G22970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658114.1	4.6e-61	100.00	cyclin-dependent protein kinase inhibitor SMR3 [Cucumis sativus] >KGN65712.1 hyp...	[more]
XP_016902107.1	8.5e-55	92.19	PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo] >K...	[more]
KAG7036922.1	1.2e-37	71.77	hypothetical protein SDJN02_00542, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6607237.1	5.2e-36	73.11	hypothetical protein SDJN03_00579, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAE8039043.1	1.2e-21	47.59	hypothetical protein FH972_011491 [Carpinus fangiana]	[more]

BLAST of CSPI01G22970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02420.1	3.9e-05	41.18	unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bac...	[more]
AT5G59360.1	8.6e-05	30.61	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..89
None	No IPR available	PANTHER	PTHR33142:SF66	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR2-LIKE	coord: 31..126
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 31..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G22970.1	CSPI01G22970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045839	negative regulation of mitotic nuclear division
biological_process	GO:0032875	regulation of DNA endoreduplication
cellular_component	GO:0005634	nucleus