CSPI01G21910 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G21910
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Cupin type-1 domain-containing protein
Location	Chr1: 17489910 .. 17490659 (+)
RNA-Seq Expression	CSPI01G21910
Synteny	CSPI01G21910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACTTGGGTATTAATACTCATTTGAAGCTCCGTTGAGTTCTTGGGCGTCCAATACAATACAACGATGGAAGGCCAGCAGGTTCTGGAGAATTTCGATTCTCTCTGGTTCTTCGCCACCGTATTCTCCAACAGAACGCCACCGGTCGTTGGAAAACCCATTCAAAACGACTTCGTTGGTTCTCTCGGAGAAGAAATTGCGACACCCATCACTCGAAATGAGGAAAATAATGTTTGTGAAGAGAAGGAGATGGAAACCGAGGAGAGGGAAGAGAAGAGGAGAAAAAACAGAGGAGGGAGGAGTTGGGGTTTGGAACAGAGGAAAAAATTTATTGTTGGAGAGATAGATCTGAGTTATGCTGTGAAGGAGATTTGTGAATGTTGGTCTTTTGAAGAGATGAGAATTGGAGGTGGGGAGAAGACGAAGAAGATGCCATCATTTGAAGATAGTATGGCCATGAAAGAGCATATCAGATCTTGGGCTTATGCAGTGGCTTGTACTGTTAGATGATCACACTAATTTTAACCATTGTTTTGTTTTATGATGTTTTTTCTATTCAAATTTTGTAATCAGATCTGTATTTTGATGAATAAGTTTCTCCATTTTTAGTTTACGTTCCTTCTAATTTACGAATTTTGTTCTTAATTTTTCTAAAAGTGTAAAGTAATCTCTGTTAACCTTCATTTTCTGAATTTTTTTCACTTTGTGTTTGATTGTTTTTCGGTGGTATCAATTTGGTTGTTTGTGTAT

mRNA sequence

AAAACTTGGGTATTAATACTCATTTGAAGCTCCGTTGAGTTCTTGGGCGTCCAATACAATACAACGATGGAAGGCCAGCAGGTTCTGGAGAATTTCGATTCTCTCTGGTTCTTCGCCACCGTATTCTCCAACAGAACGCCACCGGTCGTTGGAAAACCCATTCAAAACGACTTCGTTGGTTCTCTCGGAGAAGAAATTGCGACACCCATCACTCGAAATGAGGAAAATAATGTTTGTGAAGAGAAGGAGATGGAAACCGAGGAGAGGGAAGAGAAGAGGAGAAAAAACAGAGGAGGGAGGAGTTGGGGTTTGGAACAGAGGAAAAAATTTATTGTTGGAGAGATAGATCTGAGTTATGCTGTGAAGGAGATTTGTGAATGTTGGTCTTTTGAAGAGATGAGAATTGGAGGTGGGGAGAAGACGAAGAAGATGCCATCATTTGAAGATAGTATGGCCATGAAAGAGCATATCAGATCTTGGGCTTATGCAGTGGCTTGTACTGTTAGATGATCACACTAATTTTAACCATTGTTTTGTTTTATGATGTTTTTTCTATTCAAATTTTGTAATCAGATCTGTATTTTGATGAATAAGTTTCTCCATTTTTAGTTTACGTTCCTTCTAATTTACGAATTTTGTTCTTAATTTTTCTAAAAGTGTAAAGTAATCTCTGTTAACCTTCATTTTCTGAATTTTTTTCACTTTGTGTTTGATTGTTTTTCGGTGGTATCAATTTGGTTGTTTGTGTAT

Coding sequence (CDS)

ATGGAAGGCCAGCAGGTTCTGGAGAATTTCGATTCTCTCTGGTTCTTCGCCACCGTATTCTCCAACAGAACGCCACCGGTCGTTGGAAAACCCATTCAAAACGACTTCGTTGGTTCTCTCGGAGAAGAAATTGCGACACCCATCACTCGAAATGAGGAAAATAATGTTTGTGAAGAGAAGGAGATGGAAACCGAGGAGAGGGAAGAGAAGAGGAGAAAAAACAGAGGAGGGAGGAGTTGGGGTTTGGAACAGAGGAAAAAATTTATTGTTGGAGAGATAGATCTGAGTTATGCTGTGAAGGAGATTTGTGAATGTTGGTCTTTTGAAGAGATGAGAATTGGAGGTGGGGAGAAGACGAAGAAGATGCCATCATTTGAAGATAGTATGGCCATGAAAGAGCATATCAGATCTTGGGCTTATGCAGTGGCTTGTACTGTTAGATGA

Protein sequence

MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEEKEMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTKKMPSFEDSMAMKEHIRSWAYAVACTVR*

Homology

[Close]

BLAST of CSPI01G21910 vs. ExPASy TrEMBL
Match: A0A0A0LX63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470250 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 5.3e-78
Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEEK 60
           MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCE K
Sbjct: 1   MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAK 60

Query: 61  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 120
           EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK
Sbjct: 61  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 120

Query: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 148
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of CSPI01G21910 vs. ExPASy TrEMBL
Match: A0A5A7UQZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002450 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.0e-70
Identity = 134/147 (91.16%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEEK 60
           MEGQQV ENFDSLWFF+TVFSNRTPPVV KPIQNDFV  LGEEIATPITRNEEN+V EEK
Sbjct: 1   MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60

Query: 61  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 120
           EMETEE EEKRRKNRG RSWGLEQR+KF+VGEIDLSYAVKEICECWSFE MRIGGG+KTK
Sbjct: 61  EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEVMRIGGGKKTK 120

Query: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 148
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of CSPI01G21910 vs. ExPASy TrEMBL
Match: A0A1S3B8X4 (uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.0e-70
Identity = 134/147 (91.16%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEEK 60
           MEGQQV ENFDSLWFF+TVFSNRTPPVV KPIQNDFV  LGEEIATPITRNEEN+V EEK
Sbjct: 1   MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60

Query: 61  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 120
           EMETEE EEKRRKNRG RSWGLEQR+KF+VGEIDLSYAVKEICECWSFE MRIGGG+KTK
Sbjct: 61  EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEVMRIGGGKKTK 120

Query: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 148
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of CSPI01G21910 vs. ExPASy TrEMBL
Match: A0A6J1EGY0 (uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC111434099 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.5e-40
Identity = 105/167 (62.87%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 1   MEGQQVLENFDSLWFFATVFSNRT-PPVVGKPIQNDFVGSLGEEIATPITRN-----EEN 60
           ME QQVL+N DSLWFFATVFSNRT PPVV KP Q+DFV   G EIATPI +N     EE 
Sbjct: 1   MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEER 60

Query: 61  NVCEEKEMETEER-----EEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFE 120
           N+ +EK  ET         E+RRK+R GR WG   +++ IVGE+DLS AVKEICECW  E
Sbjct: 61  NIVDEKTNETGGGLGLIITEERRKSR-GRRWGCLGQRRKIVGEMDLSDAVKEICECWLLE 120

Query: 121 EMRIGGGE---------KTKKMPSFEDSMAMKEHIRSWAYAVACTVR 148
           + RIGGG          K KKMP FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 Q-RIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 165

[Close]

BLAST of CSPI01G21910 vs. ExPASy TrEMBL
Match: A0A6J1KF61 (uncharacterized protein LOC111495257 OS=Cucurbita maxima OX=3661 GN=LOC111495257 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.1e-38
Identity = 101/174 (58.05%), Postives = 118/174 (67.82%), Query Frame = 0


Query: 1   MEGQQVLENFDSLWFFATVFSNRTP--------PVVGKPIQNDFVGSLGEEIATPITRNE 60
           ME QQVL+N DSLWFFATVFSN+ P        PVV KP +NDFV   G EIATPI +N+
Sbjct: 1   MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ 60

Query: 61  EN-----NVCEEKEMET-----EEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEI 120
           +N     N+ +EK  ET         E+RRK+R GR WG  ++++ IVGE+DLS AVKEI
Sbjct: 61  QNVGDERNIVDEKTNETGGGFGSIITEERRKSR-GRRWGCLRQRREIVGEMDLSDAVKEI 120

Query: 121 CECWSFEEMRIGGGE---------KTKKMPSFEDSMAMKEHIRSWAYAVACTVR 148
           CECW  E+ RIGGG          K KK+P FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 CECWLLEQ-RIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR 172

[Close]

BLAST of CSPI01G21910 vs. NCBI nr
Match: XP_011657601.1 (uncharacterized protein LOC101209234 [Cucumis sativus])

HSP 1 Score: 300.1 bits (767), Expect = 1.1e-77
Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEEK 60
           MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCE K
Sbjct: 1   MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAK 60

Query: 61  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 120
           EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK
Sbjct: 61  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 120

Query: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 148
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of CSPI01G21910 vs. NCBI nr
Match: KAE8653211.1 (hypothetical protein Csa_019764 [Cucumis sativus])

HSP 1 Score: 300.1 bits (767), Expect = 1.1e-77
Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEEK 60
           MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCE K
Sbjct: 33  MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAK 92

Query: 61  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 120
           EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK
Sbjct: 93  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 152

Query: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 148
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 153 KMPSFEDSMAMKEHIRSWAYAVACTVR 179

[Close]

BLAST of CSPI01G21910 vs. NCBI nr
Match: XP_008443476.1 (PREDICTED: uncharacterized protein LOC103487056 [Cucumis melo] >KAA0057057.1 uncharacterized protein E6C27_scaffold96G002450 [Cucumis melo var. makuwa])

HSP 1 Score: 273.9 bits (699), Expect = 8.3e-70
Identity = 134/147 (91.16%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEEK 60
           MEGQQV ENFDSLWFF+TVFSNRTPPVV KPIQNDFV  LGEEIATPITRNEEN+V EEK
Sbjct: 1   MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60

Query: 61  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 120
           EMETEE EEKRRKNRG RSWGLEQR+KF+VGEIDLSYAVKEICECWSFE MRIGGG+KTK
Sbjct: 61  EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEVMRIGGGKKTK 120

Query: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 148
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of CSPI01G21910 vs. NCBI nr
Match: XP_038895160.1 (uncharacterized protein LOC120083464 [Benincasa hispida])

HSP 1 Score: 220.7 bits (561), Expect = 8.4e-54
Identity = 119/165 (72.12%), Postives = 130/165 (78.79%), Query Frame = 0


Query: 1   MEGQQVLENFDSLWFFATVFSNRT-----PPVVGKPIQNDFVGSLGEEIATPITRNEENN 60
           MEGQQVLEN+DSLWFFATVFSNRT     PPVV  P QNDFV   GEEIATP+T NE+NN
Sbjct: 1   MEGQQVLENWDSLWFFATVFSNRTPPPPPPPVVENPTQNDFVEPPGEEIATPLTPNEQNN 60

Query: 61  VCEEKEMET-------EEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSF 120
           V +EK++E         E +E+RRKNRG R WGLEQR+K IVGE+DLSYAVKEICECW F
Sbjct: 61  VGDEKKIENGGGFGIKTEEKEQRRKNRGRRCWGLEQRRK-IVGEMDLSYAVKEICECWLF 120

Query: 121 EEMRIGGG------EKTKKMPSFEDSMAMKEHIRSWAYAVACTVR 148
           EE RIGGG      +KTKKMP FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 EETRIGGGNQYQRKKKTKKMPPFEDSMAMKEHIRSWAYAVACTVR 164

[Close]

BLAST of CSPI01G21910 vs. NCBI nr
Match: XP_022927166.1 (uncharacterized protein LOC111434099 [Cucurbita moschata])

HSP 1 Score: 175.6 bits (444), Expect = 3.1e-40
Identity = 105/167 (62.87%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 1   MEGQQVLENFDSLWFFATVFSNRT-PPVVGKPIQNDFVGSLGEEIATPITRN-----EEN 60
           ME QQVL+N DSLWFFATVFSNRT PPVV KP Q+DFV   G EIATPI +N     EE 
Sbjct: 1   MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEER 60

Query: 61  NVCEEKEMETEER-----EEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFE 120
           N+ +EK  ET         E+RRK+R GR WG   +++ IVGE+DLS AVKEICECW  E
Sbjct: 61  NIVDEKTNETGGGLGLIITEERRKSR-GRRWGCLGQRRKIVGEMDLSDAVKEICECWLLE 120

Query: 121 EMRIGGGE---------KTKKMPSFEDSMAMKEHIRSWAYAVACTVR 148
           + RIGGG          K KKMP FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 Q-RIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 165

The following BLAST results are available for this feature:

BLAST of CSPI01G21910 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI01G21910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX63	5.3e-78	99.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470250 PE=4 SV=1	[more]
A0A5A7UQZ2	4.0e-70	91.16	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3B8X4	4.0e-70	91.16	uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=...	[more]
A0A6J1EGY0	1.5e-40	62.87	uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC1114340...	[more]
A0A6J1KF61	1.1e-38	58.05	uncharacterized protein LOC111495257 OS=Cucurbita maxima OX=3661 GN=LOC111495257...	[more]

BLAST of CSPI01G21910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657601.1	1.1e-77	99.32	uncharacterized protein LOC101209234 [Cucumis sativus]	[more]
KAE8653211.1	1.1e-77	99.32	hypothetical protein Csa_019764 [Cucumis sativus]	[more]
XP_008443476.1	8.3e-70	91.16	PREDICTED: uncharacterized protein LOC103487056 [Cucumis melo] >KAA0057057.1 unc...	[more]
XP_038895160.1	8.4e-54	72.12	uncharacterized protein LOC120083464 [Benincasa hispida]	[more]
XP_022927166.1	3.1e-40	62.87	uncharacterized protein LOC111434099 [Cucurbita moschata]	[more]

BLAST of CSPI01G21910 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 48..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..79
None	No IPR available	PANTHER	PTHR33785:SF8	SUBFAMILY NOT NAMED	coord: 31..147
None	No IPR available	PANTHER	PTHR33785:SF8	SUBFAMILY NOT NAMED	coord: 1..30
None	No IPR available	PANTHER	PTHR33785	FAMILY NOT NAMED	coord: 1..30
None	No IPR available	PANTHER	PTHR33785	FAMILY NOT NAMED	coord: 31..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G21910.1	CSPI01G21910.1	mRNA