CSPI01G21580 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G21580
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ribosome maturation factor RimM
Location	Chr1: 17158718 .. 17167029 (+)
RNA-Seq Expression	CSPI01G21580
Synteny	CSPI01G21580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTAACCGCTAAATTATCTGAAAGGATGGCGTTCCTGTAAACGCCGTCGAGCCACCATTCCGGCGTTCGTTATCGTTCATTACTCCGGTGCTTCCATTTCCGGCCACGCCGTTCTGAAAACGATGCAAAGTACTTCACCGCTGTGTTCTTCTACCTCTTTCTTTCATTCTTTTCCAAATATATCCATTCTTAATCGATGCTCTCAGCTTTTCCGAAGACGTCTTCCTCTTACTTGCAAGGGTTCGGCTTCCTTGATTCTTCAGCTGCCCCTGTACCATCTTCACAGTTCCGCGCATTCGCAGCCTTCCCGCCGAAGAGTTGGTAAGTTCCTTTAGTTTGATTGTTACTGCAATTTATCTTGTTTAAGTTATGGCTGGTGGAACAGGTCTGCTTTTGTGGTATATGTGTCCTTTTTTTGGAAATGCAATTTGAAATGAACTGGATTTTGTTGGTGTTGTTTAATGATTTGAAGGGAGTGCGTTGTTCTTTTGAGTTGATGTGGGTAATTTAAACGTAAAATCATAATTTGTATTTGCATTTCAGCTTCTTCTGAGATTTTAGAAACTGTGGAGGCTCCGTCAGGATTCGTTGAAATTGGTTACATATCCAATGTTCATGGGACTGAGGGGGAAGTCCGAGTGAAACCTATTACTGATTTTCCTGAACTGCGATTCTCAACGGTAAACCAATGGCAATCATTCTCGAAAGAACTTATAATTTCTACAGCATTATAAGAATGAGCTACTCCTCGTATATTGAAATGAAATTCAAACTCTTACAGTATATGCCTTTATACTTCCAGTTTTTTGCAGAAGAAAAGAAAAGCCCCTCCAATGCAGTGCTATAATACATATACATGTATATATAGATACATATATACGTATGTACGTATATTGGGGGAAGGGGTCTTTATACAATACAAATACTCAAACCTTGAGTTTGTCTGTCATCCTAGTCTCTCAAATCATTAGGAATTGCTACTTACCTCTTTTCTTTAGCCTGGCACAAGGTGGTTGAAGCAGCAAGTTTCAGGAAGGGAAGAAATCCGAGAAGTTGATCTTGAAGATGGTAGGGAACATCCTGGTCGAAAGAGTTGGATCCTGAAGTTTATAGGAATTGATACTGCAGATCAGGTGATCCTATTTCTCTGTTTATGTATGAATAATCATGTTTCTGAAAATTGTGTTTTTATTCTCGTTATTACTTCCTGTAGATGTTTAATCTATAGAAGCTGAGTTTATTATTGTTGATTTCTTTTTTAGGCACTTTTACTTGTTGAACCCCCCACAAAGAAAAAAAAGCAGTCAGATAATTTAGCACAGCAAATTTTACTATTTTCAATGATATTGTTAGAGAGTCATTATAAACTATTTCAAACTAAAACGTGTCAGTAGTCCTGATTTGATAAACTATTCAGGCCAAACTACTCATTGGATCAACTCTTCTAGTGAAAGAAGAAGACCGACCAGAATTAGAAGAAGGTGAATTTTATTCACGTGATCTTGTTGGCATGAGTGTTATTCTGAAGGTATGCACCTCTTCAGGGAAGTAAGCTGATTTGTTTAAGTATTCAGTTATTCAATTTTAGGTCTGCTTATGGGGATTTATTGTCATTCTGTAGTTCAGAACGAGGATGTATTTAATGCAGCTCATTGTTTTTTCATAAATTATGGATGATTGCCTCTTCAGGAACTATAGTTTGTATAGAACTTTCCTGCACATCTTGAATTCTGCTTTTGGAATAGTTATATATATTTTTTTTTTCTTTGGTGGTTACTTTGTTTTATCCCTTCACAAAAATATGCTATATTTATTGATTTCTTTCTTTAGTTGCTTTTGTTTTCTTCTGATACTAATTGCATACAACCCTTCAGGAAACTAGTCAATCTCTGGGAACTGTTGTTAACGTATTTGATAGTGGAGGGGCAGATCTTTTACATGTCATGCTTAATAGTTCAGAAGATATTCTTGATACCTCTGGAAATCCAACATCAATTGAGACTAGAGTTTCAGGCCGCCTCATTTGGATACCTTTTGTCGAAGCAATTGTTCCTATTGTTGATCTCCAAAGACGAGAAATGAAAATTACACCTCCAAAAGGACTTCTGGAATTAAATTTTCAATCTGACGAGAGATCGAAGAAAGAACGACGCCAACTTGTGAGACATATTTTTTTTCCCACTCTGTACCTGCTTTATAAATAAATGAAGTAAGCATGCCAACTTATTTTCAATGATGAAATGCCCCGGTTTTATTCAGACATTTGAACATGTTTCATGGTTATTGATTGCTTATGTTTTCTTGTAATTTGTGTATTTGATGACAGAAATATGAATTTTGCTACTTTTTTTTTTATTTCATTGTAGGAATGGAAAGAAAGGAAAAAGTTTCAAAAATGTCTTGTAGCTGCAAAAAAGAAGCTGTCTGAAATGGAACAGGAGCACGTATTTGATGGTTTCAAATTTGGAGAAAAAGACCAGGGAAAGTTACTTGCCGATCAAATAGTTGGAATCAATTCCAAGTTGCTTCAAAAGGCTTTACAAGATATTGAGATTCCTACAAGAAGGTGTAGTTCAATTTTGAATTAGACATAAACACAGTTTACTCTATTTATAAATTGTCTTTTTTCCAAAATGGTGTATTTTTATTTTGAGCTAGACATAGTTTTCTCCATCTTTCCATTCATTTCCATGTATCCTGGAGTCCTGATTAAATTAAACTCTAGTGATGTACATAATCAATTGCTGGGCAGGTGCTAAGTCATTGGTTTTTTTATACAATTCGAGTTGGTGAATCCTGTCATACAATGTTACAAATGTTTATTCTCTTCCCATTTCTCTTTTGAAAGATATCGATATGATTATTTAAAATTGATTAGTTGAGTATCTCCTTCACTTAAAATTTACTTACTTACAGTTGGTTTTGTTAAGTTTTAGATATTTAACATTTCGCTGTTGGATTCGGGAGTTTCCTTGAAGTCAATGATTTCATGTGTGTTTAAATCCTTTTGACTACTTTCCAATGCACTGATCATATTCTCAATTGACTACTTGAATCAGGTTGACTGTTAACGAGCTATTTGATGCCTCTAAATTGGTAAAAGTACAAAATACTTTGGGGATATCAGATAGATGTGTCATTTCTTGTGCAAATGAAGAGGAACTTGGTACACACGCCAATTTGCAGAAAAACGGACTTGATCTCATATCTTCTGGAAAAATTGCCATTGTTTTAGTTGTTAATGATGAGGGGTGGTACTCCAATCTTGGTCTAGTCTGTGATATTGCTGACCATCCAGCATCTTCTTCCCTTCCCGATCTACTTTCTGATGATAGAAGGTTTGCAAAGGTTGTATTTTTTCCCCTTTTTTCTTCATTCTTTTATACGGATGGATTGATGTAGGCATTAAATGATAAGTTTGTTAGCTGTGATTCAATGTGCATTAGTTATTGTTAGAATTAGCGGGCTTGTTGTATGTTGAAAGCTCGAGAGTTTGTTAAGATTTTATAGTGCCCTAATTATCTTTTATTATTTTTATTATGGGTTCTATAACCTATAAATATATGCTCCCCGTATCATTATGAGATAGATAAAAATAATAAGAAAATAGCCTTGTGTTCTTTCTCCCTGTCCTAGAGTTTCCATGTAAAATAGTTTGTCTTTCTATTTTTCTTCTTTCAATATGGTATCAGAGCAAGGTGTCGATGAAACCCTAGGAGGTCAAACACTTGCTGAAAACCGAACAGAGGAGACAGCCGCCATCAGTGCCACCATTGCCGCTGTCATCGATGCTCGTATAGGTGCTGCATGGATGAATGGTTTCGACGACTTCAGACAATGTCAATGATCTTGAACCTAGCTTTTTCTCCGCTGCACGCACCGCCCACGCACTCCCGTCGCTGCTGCTGGAGACCACCGAACCTACCCATCTTGTTTAGAAAGGGCCAACCAACCCATCCCTGACACCCTTGCCTTCATCTGCAGCCGTTAATGCCTCCCACGCGCCGCTTCATGTTCTGCCATCTACCTCCGTCGATCCACCGCCCGCCGCTTCTGCTGACCAACTTGTATGCCTTGTCGTCCACTGCCTCTATTCCAAACCCTAGCTATCATTCCGAGGTTGGGCATCCCCAAATCTACTCAACATTTGAAGTTGGAGAGTCTTCAGCATATTCGAACCCTAACGTGCCAATCTCTTCTTCTTCGAATATAGCCCACCAGCAACTAGAGGAGCTTAGACAGCAGATTGCGACACTTGAGGCTACCTTAGGGGCAACATCCAATACCCTTAGTCGTGGTCTCCATACATCTTTACTGGTGTATTCTAAGAATCCTATAACTTTGTTCCCTTCTCTATCCTCTCCTTATGTGATTAATACAGTGGCACAGTCTACAAGATATTTTTCAGGGTAAAAGTTGAACGGCAATAACTATTTCTCATGGTCTCAGTCAGTGAAAATGGTTCTTGAAGGGCGACATAAATTCGGTTTTCTGACGGGGGAAATACCTCGTCCTTCGCCTGGGGACCCTCAGGAACGGTACTGGAAGGGGGAGGATTCTCTTCTTCGATCCACATTAATCAATAGTATGGAGCCACATATTGGCAAACCTTTACTCTACCCTGCAACTGCTAAGGGTATTTGGGACGTAGCCCAGAAACTGTATTCCAAACGTCAAAATGTCTCTCGCCTATATACTCTACGAAAACAGGTTCATGAATGCAAGCAAGGGACCATGGATGTTACATCCTCTTTTAACAAACTCTCGCTTATCTGGCAAGAGATGGATCTATGCAGAGAATTAGTATGGAAATGAGGTGACCGAAAAAGTTACAAAGAATAACACTAAGGAGCATTTAGAAAATATCAGTAAGTATGATTTGTCTCTTGATCTTCCTATTGCACTGAGGAAGGGTACTAGGTCCTACACAAAGACTCTATTGCTAATTTTGTGTCTTATAAGAACCTGTCTCCTCAATTTAGAGCCTTTACAGCTAGTTTTGACTCTATTGTTATACCCAAAATATCCATGTTGCCTTTGAATGCCCAGAGTGGAAAATTGCAGTCATGGAGGAAATGAGAGCCCTGAAAAGAACAAGTCTTGGGAGCTCTGCACTTTACCTAAGGGACACAAGAGTGTGGAATGCGAGTGGGTGTTCACTATCAAGTACAGAACTGATGGTACTCTTGATAGATATAAGGATAGATTAGTTGCAAAAGAGTTCACTCAAACTTATGGGGTTGACTACTCTGAAACCTTCTCTCATGTTGCAAATTTGAACACTGTGAGAGTCTTACTTTCGGTCGTTGTGAATAAAAACTGACCTCTATATCAACTTGATGTTAAGAACACATTCTTGAATGGAGATTTAGAAGAAGTGTATATGAGTCCTCCATAGGGATTTGAAGCTCAGTTTGACCATCAGGTTTGCAGGCTTCGAAAGTCCTTGTATGGGTTGAAACAGTCACCAAGAGTTTGGTTTGACAGATTTACCACCTTTGTCAAGTCTCAAGGGTACGCTCAGGGGCATTCTAATCATACTTTATTCACAAAAGTCTCCAAGTCTAGAAAAATTACAGTTTTGATAGTTTATGTTGATAACATTGTTCTATCTGGCAATGACGCCGATGAAATCCTCCGGTTAAAAAGGAAGATGGGGGATGAGTTTGAAATTAAAGACTTGGAAAATTCGAAATACTTCCTTGGATGGAAATTGCCAGATCTAGAGAAGGCATCTCTGTATCCTAGAGGAAATATACCCTTGATTTGTTAACTGAGACAGGTATGTTAGAGTGTCGTCCTGCTGATACACCTATTGAGTCCAATGCTAAACTCAGAAATACAGGTGATCAAGTTCCGATTGACAAAGAAAAGTATCAACACCTACTGGGCAAACTGATTTATTTATCTCACAGTAGGCCGGACATCTCATATGTTGTGAGTACTGTTAGTCAGTTCATGCAGACTCCTTACGAAGAACACATGGAGGCAGCAAACAGAATTCTGAGGTATTTAAAAAAACTCCTAGTAAGGGATTGAGATTCAAAAAAACTGACGAAAGGTGTATTGAGGCATATACATATTCTGATTGGGCAGGGTCTATTGTTGATAGAAAATCTATCTTCGGGTACTGTACTTTTGTATAGGGCAATCTTGTTACTTGGAGAAGTAAGAAGCAAGGAGTTGTTGCCAGGAGTAGTGTCGAAGCTGAATACAGGGCCATGAGTTTGAGAATTTGTGAAGAAATTTGGCTTCAAAAGGTGTTATCTAATCTTCATCAGGACTATGAGGTGCCTATGAAACTTTTCTATGATAATAAGGCGTTTATCAGCATTGCTAATAACCTAGTCCAACATGGCAGAACTAAACATGTAGAGATTGACGGACACTCTATCAAAGAGAAATTGAACAGTGGTAGCATCAGCATTTCTTACATACCTTCAAGCCTACAAATTGCTGATATTCTCACAAAATGACTTCTCAGACAAAGCTTTGAGTCTTGTGTTAGCAAGTTGGGTCTTTTTGACATTTATGGGCCAACTTGAGGGGGAGTGTTAGAATTAGCGGGCTTGTTGTATGTTGAAAGCCCGAGAGTTTGTTAAGATTTTATAGTGCCCTAATTATCTTTTATTATTTTTATTAATGGATTCTATAACCTATAAATATATGCTCCCTCTATCATTATGAGATAGAGAATAATAATAAGAAAATAGCATCGTGGTTTTTCTTCCTGTTTTAGGGTTTTCACGTGAAATAGTTTGTCTTTCTATTTTTCTTCTTTCAACAGTTATGGAATCCACTTTTCATCACTGGAGTTTTTAAGAATATTGTTCTTGCATGTGGTAAGAAATGCTTTGCTAGGATTGGGTTTTAATTCTCAGTTTCCATTCTACTTTTTACACCTTACTTGTTGAAATGAATGTAGTTTGTGAGGATTTAAATGTATAAACCAGGTAATTTACTAGGATTACTTGCTGAAATGACAATATAGGTTAATTGCATTAGCTTTTAGGTATTTTATGCATTAATGTGGGAAAGGTATTGCTTGGGTTTGCATTGTATTCTACTAGATAAATATTTAAATCTTCATGAGCATGGATCTTTGAGAATATTTTCTGAATTAAACATGTGTTCTTCTCAGATTGAAGACCGGCCTTACGTGCCTCTGATTTTGGTATGCTCAGCTTCCACAATTCATTCAATTGAAAAGCTTTTCGTGGACAATGATTACTTTGCCTTCGATTCTGAAAAGGTTGGTGAACAGTATTTCAGTGAAGTTCTATTCCGATATCATTGTAAGAGAAGTGAAAGTGTGAAGAGCAACGGTAGAATTAACTCACAGATCCTTAAAAATCAAACATTAAATTCTAATTCTTAAAAGTATAAGAACAAACATTAAATTTTATTTTTTAATGATTAAGGATGTGATTGAGAGTAATTAACAAAGTGATATCATATAACCAATTCAAAAAACCACTCCCAAGCATGTGTGAAATCTAGACGAGCCAGGTAATGGAGTCATCAATTCATTATTTAAACTTTTACAATGGATTTGGGGCGATTTAGCAAATAGCAATTTTTATGGAGTCATTAACAAATCTCTTGCTTAATTACTTGGAACTAATTTTCCAGATCTGGTTTTTGAAAGAAGAGAGACTTCCAGTTGTTAGCAATGTGGTTGATGAACAGAGCAAATTCAAGATTCTGATGAAATCACCCTGGGAAATTCTACAATCTCCAGTTGGTTCTGGCGGAGTCATCAACTTGCTTTCATCTCCCAACATTTTGGAACGTCTCACTGAACTTGGCATGGAGTATGTCGAGGTAAGAAAAGTTATCAATGTTACCTTGTGATGGTTTATCTCTCCGAGTTGCTTGTTCATTGAGTTGACATTGTAACTTCTTACAGATTTGCAGCAGCAACCATAGAAATGCTGGGATGAACTCTCTACTTCTTGGATATACTCATTCCTGCAGTGCTAATGTTGGGATTCAGCTCCATAAAGGTAACGGTGACTTTGAGAAAAGCTTTGATTTGATATTCTCAATGAACTTCATAAGGAAATTGATGAAGCAAATTGATAAGCCTCAGTTCTATGCCATCCCCAAATCAAATGCGCATGTTGAGAAGGTTGAAAAAGAGTGGGTTGAGCTTAGCCCTTCCTCTCCTAACTCATACCAACTTTATTCTTCAATCTTTAGTTGGTTAGACGAGTGTTCTTTTGATGAAATCTTTACGATGGAAAATTCTTAAATAGATCGGTGGTCAATATATGAAATGTCTTCTCATTTTTTTAAACTTTGGTCAGA

mRNA sequence

CTCTTAACCGCTAAATTATCTGAAAGGATGGCGTTCCTGTAAACGCCGTCGAGCCACCATTCCGGCGTTCGTTATCGTTCATTACTCCGGTGCTTCCATTTCCGGCCACGCCGTTCTGAAAACGATGCAAAGTACTTCACCGCTGTGTTCTTCTACCTCTTTCTTTCATTCTTTTCCAAATATATCCATTCTTAATCGATGCTCTCAGCTTTTCCGAAGACGTCTTCCTCTTACTTGCAAGGGTTCGGCTTCCTTGATTCTTCAGCTGCCCCTGTACCATCTTCACAGTTCCGCGCATTCGCAGCCTTCCCGCCGAAGAGTTGCTTCTTCTGAGATTTTAGAAACTGTGGAGGCTCCGTCAGGATTCGTTGAAATTGGTTACATATCCAATGTTCATGGGACTGAGGGGGAAGTCCGAGTGAAACCTATTACTGATTTTCCTGAACTGCGATTCTCAACGCCTGGCACAAGGTGGTTGAAGCAGCAAGTTTCAGGAAGGGAAGAAATCCGAGAAGTTGATCTTGAAGATGGTAGGGAACATCCTGGTCGAAAGAGTTGGATCCTGAAGTTTATAGGAATTGATACTGCAGATCAGGCCAAACTACTCATTGGATCAACTCTTCTAGTGAAAGAAGAAGACCGACCAGAATTAGAAGAAGGTGAATTTTATTCACGTGATCTTGTTGGCATGAGTGTTATTCTGAAGGAAACTAGTCAATCTCTGGGAACTGTTGTTAACGTATTTGATAGTGGAGGGGCAGATCTTTTACATGTCATGCTTAATAGTTCAGAAGATATTCTTGATACCTCTGGAAATCCAACATCAATTGAGACTAGAGTTTCAGGCCGCCTCATTTGGATACCTTTTGTCGAAGCAATTGTTCCTATTGTTGATCTCCAAAGACGAGAAATGAAAATTACACCTCCAAAAGGACTTCTGGAATTAAATTTTCAATCTGACGAGAGATCGAAGAAAGAACGACGCCAACTTGAATGGAAAGAAAGGAAAAAGTTTCAAAAATGTCTTGTAGCTGCAAAAAAGAAGCTGTCTGAAATGGAACAGGAGCACGTATTTGATGGTTTCAAATTTGGAGAAAAAGACCAGGGAAAGTTACTTGCCGATCAAATAGTTGGAATCAATTCCAAGTTGCTTCAAAAGGCTTTACAAGATATTGAGATTCCTACAAGAAGGTTGACTGTTAACGAGCTATTTGATGCCTCTAAATTGGTAAAAGTACAAAATACTTTGGGGATATCAGATAGATGTGTCATTTCTTGTGCAAATGAAGAGGAACTTGGTACACACGCCAATTTGCAGAAAAACGGACTTGATCTCATATCTTCTGGAAAAATTGCCATTGTTTTAGTTGTTAATGATGAGGGGTGGTACTCCAATCTTGGTCTAGTCTGTGATATTGCTGACCATCCAGCATCTTCTTCCCTTCCCGATCTACTTTCTGATGATAGAAGGTTTGCAAAGATTGAAGACCGGCCTTACGTGCCTCTGATTTTGGTATGCTCAGCTTCCACAATTCATTCAATTGAAAAGCTTTTCGTGGACAATGATTACTTTGCCTTCGATTCTGAAAAGATCTGGTTTTTGAAAGAAGAGAGACTTCCAGTTGTTAGCAATGTGGTTGATGAACAGAGCAAATTCAAGATTCTGATGAAATCACCCTGGGAAATTCTACAATCTCCAGTTGGTTCTGGCGGAGTCATCAACTTGCTTTCATCTCCCAACATTTTGGAACGTCTCACTGAACTTGGCATGGAGTATGTCGAGATTTGCAGCAGCAACCATAGAAATGCTGGGATGAACTCTCTACTTCTTGGATATACTCATTCCTGCAGTGCTAATGTTGGGATTCAGCTCCATAAAGGTAACGGTGACTTTGAGAAAAGCTTTGATTTGATATTCTCAATGAACTTCATAAGGAAATTGATGAAGCAAATTGATAAGCCTCAGTTCTATGCCATCCCCAAATCAAATGCGCATGTTGAGAAGGTTGAAAAAGAGTGGGTTGAGCTTAGCCCTTCCTCTCCTAACTCATACCAACTTTATTCTTCAATCTTTAGTTGGTTAGACGAGTGTTCTTTTGATGAAATCTTTACGATGGAAAATTCTTAAATAGATCGGTGGTCAATATATGAAATGTCTTCTCATTTTTTTAAACTTTGGTCAGA

Coding sequence (CDS)

ATGCAAAGTACTTCACCGCTGTGTTCTTCTACCTCTTTCTTTCATTCTTTTCCAAATATATCCATTCTTAATCGATGCTCTCAGCTTTTCCGAAGACGTCTTCCTCTTACTTGCAAGGGTTCGGCTTCCTTGATTCTTCAGCTGCCCCTGTACCATCTTCACAGTTCCGCGCATTCGCAGCCTTCCCGCCGAAGAGTTGCTTCTTCTGAGATTTTAGAAACTGTGGAGGCTCCGTCAGGATTCGTTGAAATTGGTTACATATCCAATGTTCATGGGACTGAGGGGGAAGTCCGAGTGAAACCTATTACTGATTTTCCTGAACTGCGATTCTCAACGCCTGGCACAAGGTGGTTGAAGCAGCAAGTTTCAGGAAGGGAAGAAATCCGAGAAGTTGATCTTGAAGATGGTAGGGAACATCCTGGTCGAAAGAGTTGGATCCTGAAGTTTATAGGAATTGATACTGCAGATCAGGCCAAACTACTCATTGGATCAACTCTTCTAGTGAAAGAAGAAGACCGACCAGAATTAGAAGAAGGTGAATTTTATTCACGTGATCTTGTTGGCATGAGTGTTATTCTGAAGGAAACTAGTCAATCTCTGGGAACTGTTGTTAACGTATTTGATAGTGGAGGGGCAGATCTTTTACATGTCATGCTTAATAGTTCAGAAGATATTCTTGATACCTCTGGAAATCCAACATCAATTGAGACTAGAGTTTCAGGCCGCCTCATTTGGATACCTTTTGTCGAAGCAATTGTTCCTATTGTTGATCTCCAAAGACGAGAAATGAAAATTACACCTCCAAAAGGACTTCTGGAATTAAATTTTCAATCTGACGAGAGATCGAAGAAAGAACGACGCCAACTTGAATGGAAAGAAAGGAAAAAGTTTCAAAAATGTCTTGTAGCTGCAAAAAAGAAGCTGTCTGAAATGGAACAGGAGCACGTATTTGATGGTTTCAAATTTGGAGAAAAAGACCAGGGAAAGTTACTTGCCGATCAAATAGTTGGAATCAATTCCAAGTTGCTTCAAAAGGCTTTACAAGATATTGAGATTCCTACAAGAAGGTTGACTGTTAACGAGCTATTTGATGCCTCTAAATTGGTAAAAGTACAAAATACTTTGGGGATATCAGATAGATGTGTCATTTCTTGTGCAAATGAAGAGGAACTTGGTACACACGCCAATTTGCAGAAAAACGGACTTGATCTCATATCTTCTGGAAAAATTGCCATTGTTTTAGTTGTTAATGATGAGGGGTGGTACTCCAATCTTGGTCTAGTCTGTGATATTGCTGACCATCCAGCATCTTCTTCCCTTCCCGATCTACTTTCTGATGATAGAAGGTTTGCAAAGATTGAAGACCGGCCTTACGTGCCTCTGATTTTGGTATGCTCAGCTTCCACAATTCATTCAATTGAAAAGCTTTTCGTGGACAATGATTACTTTGCCTTCGATTCTGAAAAGATCTGGTTTTTGAAAGAAGAGAGACTTCCAGTTGTTAGCAATGTGGTTGATGAACAGAGCAAATTCAAGATTCTGATGAAATCACCCTGGGAAATTCTACAATCTCCAGTTGGTTCTGGCGGAGTCATCAACTTGCTTTCATCTCCCAACATTTTGGAACGTCTCACTGAACTTGGCATGGAGTATGTCGAGATTTGCAGCAGCAACCATAGAAATGCTGGGATGAACTCTCTACTTCTTGGATATACTCATTCCTGCAGTGCTAATGTTGGGATTCAGCTCCATAAAGGTAACGGTGACTTTGAGAAAAGCTTTGATTTGATATTCTCAATGAACTTCATAAGGAAATTGATGAAGCAAATTGATAAGCCTCAGTTCTATGCCATCCCCAAATCAAATGCGCATGTTGAGAAGGTTGAAAAAGAGTGGGTTGAGCTTAGCCCTTCCTCTCCTAACTCATACCAACTTTATTCTTCAATCTTTAGTTGGTTAGACGAGTGTTCTTTTGATGAAATCTTTACGATGGAAAATTCTTAA

Protein sequence

MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPLYHLHSSAHSQPSRRRVASSEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQQVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGEFYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVSGRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQKCLVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLTVNELFDASKLVKVQNTLGISDRCVISCANEEELGTHANLQKNGLDLISSGKIAIVLVVNDEGWYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDNDYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPNILERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSFDLIFSMNFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVELSPSSPNSYQLYSSIFSWLDECSFDEIFTMENS*

Homology

[Close]

BLAST of CSPI01G21580 vs. ExPASy Swiss-Prot
Match: A5GI62 (Ribosome maturation factor RimM OS=Synechococcus sp. (strain WH7803) OX=32051 GN=rimM PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.1e-34
Identity = 81/194 (41.75%), Postives = 120/194 (61.86%), Query Frame = 0


Query: 81  FVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQQVSGREEIREVDLEDGREHP 140
           ++ +G +  V G +GE+RV P +DFPE RF+ PG+RWLK +    +  RE++L  GR+ P
Sbjct: 6   WLPVGKVVAVQGLKGELRVNPASDFPE-RFTEPGSRWLKAR---GQAPREIELTSGRQLP 65

Query: 141 GRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGEFYSRDLVGMSVILKETSQSL 200
           G+  ++++F G+++ D A+ L+G TL+V  +DRPEL EGEF+  DLVG+   L     ++
Sbjct: 66  GKSVFVVRFAGVESRDAAEALVGQTLMVPADDRPELAEGEFHLLDLVGLEARLSADGDAI 125

Query: 201 GTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVSGRLIWIPFVEAIVPIVDLQR 260
           GTV ++  SGG DLL                   +  R  GR + IPFVEAIVP V L++
Sbjct: 126 GTVKDLI-SGGNDLL-------------------VLERPDGRTLMIPFVEAIVPDVHLEQ 175

Query: 261 REMKITPPKGLLEL 275
             +++TPP GLLEL
Sbjct: 186 GWLRLTPPPGLLEL 175

[Close]

BLAST of CSPI01G21580 vs. ExPASy Swiss-Prot
Match: Q7U9V4 (Ribosome maturation factor RimM OS=Synechococcus sp. (strain WH8102) OX=84588 GN=rimM PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.2e-33
Identity = 85/191 (44.50%), Postives = 117/191 (61.26%), Query Frame = 0


Query: 84  IGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQQVSGREEIREVDLEDGREHPGRK 143
           +G +    G +GE+RV P +DFPE RF+TPG+RWL+ +  G  E +EV L+ GR+ PG+ 
Sbjct: 10  VGKLVGAQGLQGELRVNPASDFPE-RFTTPGSRWLRGRKGG--EPKEVQLKKGRQLPGKS 69

Query: 144 SWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGEFYSRDLVGMSVILKETSQSLGTV 203
            +IL+  GID+ D A+ L+G  LLV   DRPELEEGEF+  DLVG+   L     ++G V
Sbjct: 70  LFILRLEGIDSRDAAEALVGQELLVPASDRPELEEGEFHLLDLVGLEARLHADEPAIGVV 129

Query: 204 VNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVSGRLIWIPFVEAIVPIVDLQRREM 263
            ++  SGG DLL          L TS          +GR + IPFVE+IVP V L++  +
Sbjct: 130 TDLI-SGGNDLLE---------LKTS----------AGRTLLIPFVESIVPEVHLEKGWL 177

Query: 264 KITPPKGLLEL 275
            +TPP GLL+L
Sbjct: 190 LLTPPPGLLDL 177

[Close]

BLAST of CSPI01G21580 vs. ExPASy Swiss-Prot
Match: Q0IDP0 (Ribosome maturation factor RimM OS=Synechococcus sp. (strain CC9311) OX=64471 GN=rimM PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 5.9e-33
Identity = 79/194 (40.72%), Postives = 118/194 (60.82%), Query Frame = 0


Query: 81  FVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQQVSGREEIREVDLEDGREHP 140
           ++ +G +    G +GE+R+ P +DFPE RF+ PGTRWL+ + S     +EV+L +GR+ P
Sbjct: 18  WLPVGTLVGAQGLKGELRLNPASDFPE-RFTEPGTRWLQAKGSAP---KEVELLEGRQLP 77

Query: 141 GRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGEFYSRDLVGMSVILKETSQSL 200
           G+  ++++  G++    A+ L+G T+LV  +DRPEL EGEF+  DLVG+   L  + + +
Sbjct: 78  GKSLYVVRLKGVNNRASAEALVGCTVLVPAKDRPELAEGEFHLLDLVGLEARLAGSDEPI 137

Query: 201 GTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVSGRLIWIPFVEAIVPIVDLQR 260
           GTV N+  SGG DLL + LN                   SG+ + +PFVEAIVP V L+ 
Sbjct: 138 GTVSNLI-SGGNDLLEIKLN-------------------SGKTVLVPFVEAIVPDVQLEE 187

Query: 261 REMKITPPKGLLEL 275
             + +TPP GLLEL
Sbjct: 198 GWLLLTPPPGLLEL 187

[Close]

BLAST of CSPI01G21580 vs. ExPASy Swiss-Prot
Match: Q3ANC6 (Ribosome maturation factor RimM OS=Synechococcus sp. (strain CC9605) OX=110662 GN=rimM PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.2e-32
Identity = 82/194 (42.27%), Postives = 113/194 (58.25%), Query Frame = 0


Query: 81  FVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQQVSGREEIREVDLEDGREHP 140
           ++ +G I  V G  GE+RV P +DFPE RF+ PG RWL+ +  G  E  E+ L+ GR+ P
Sbjct: 7   WLSVGKIVAVQGLLGELRVNPASDFPE-RFTVPGPRWLRSRQGG--EPSEIQLKKGRQLP 66

Query: 141 GRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGEFYSRDLVGMSVILKETSQSL 200
           G+  ++++F G+D    A+ L+G  LLV  +DRPEL EGEF+  DLVG+   L     ++
Sbjct: 67  GKSLFVVRFEGVDNRSAAETLVGMELLVPADDRPELAEGEFHLLDLVGLKARLTADGPAI 126

Query: 201 GTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVSGRLIWIPFVEAIVPIVDLQR 260
           GTV ++  SGG DLL +                   T   GR + IPFVEAIVP V L+ 
Sbjct: 127 GTVSDLI-SGGNDLLEI-------------------TTSDGRKLLIPFVEAIVPEVKLKA 177

Query: 261 REMKITPPKGLLEL 275
             + +TPP GLLEL
Sbjct: 187 GWLLLTPPPGLLEL 177

[Close]

BLAST of CSPI01G21580 vs. ExPASy Swiss-Prot
Match: Q31KY0 (Ribosome maturation factor RimM OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rimM PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 5.0e-32
Identity = 90/206 (43.69%), Postives = 120/206 (58.25%), Query Frame = 0


Query: 69  SEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQQVSGREEI 128
           SE   T+E  + ++ IG I    G  GE+RV P +DFPE RF  PG RWL++      E+
Sbjct: 2   SESTTTIE--TAWLAIGQIVAPQGLRGEMRVNPSSDFPE-RFLIPGPRWLRRPRQTEPEV 61

Query: 129 REVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGEFYSRDLVG 188
             V+LE GR   G+  +I++  GI + +QA+ L G  LLV   DRPEL+EGEF+  DL+ 
Sbjct: 62  --VELERGRAIAGKNLYIVQLAGITSREQAEALRGCELLVPASDRPELDEGEFHVLDLID 121

Query: 189 MSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVSGRLIWIPF 248
           +SVI + +S  LG V +V  S G DLL V L                     GR ++IPF
Sbjct: 122 LSVIDQASSTPLGIVRDVV-SAGNDLLVVEL-------------------TDGREVYIPF 181

Query: 249 VEAIVPIVDLQRREMKITPPKGLLEL 275
           VEAIVP+VDL +  ++ITPP GLLEL
Sbjct: 182 VEAIVPVVDLAQGRIEITPPPGLLEL 182

[Close]

BLAST of CSPI01G21580 vs. ExPASy TrEMBL
Match: A0A0A0M055 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G461020 PE=3 SV=1)

HSP 1 Score: 1312.4 bits (3395), Expect = 0.0e+00
Identity = 665/667 (99.70%), Postives = 665/667 (99.70%), Query Frame = 0


Query: 1   MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPLYHLHSSAHSQ 60
           MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPLYHLHS AHSQ
Sbjct: 1   MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPLYHLHSFAHSQ 60

Query: 61  PSRRRVASSEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQ 120
           PSRRRVASSEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQ
Sbjct: 61  PSRRRVASSEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQ 120

Query: 121 QVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGE 180
           QVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGE
Sbjct: 121 QVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGE 180

Query: 181 FYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVS 240
           FYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVS
Sbjct: 181 FYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVS 240

Query: 241 GRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQKC 300
           GRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQKC
Sbjct: 241 GRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQKC 300

Query: 301 LVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLTVN 360
           LVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLTVN
Sbjct: 301 LVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLTVN 360

Query: 361 ELFDASKLVKVQNTLGISDRCVISCANEEELGTHANLQKNGLDLISSGKIAIVLVVNDEG 420
           ELFDASKLVKVQNTLGISDRCVIS ANEEELGTHANLQKNGLDLISSGKIAIVLVVNDEG
Sbjct: 361 ELFDASKLVKVQNTLGISDRCVISGANEEELGTHANLQKNGLDLISSGKIAIVLVVNDEG 420

Query: 421 WYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN 480
           WYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN
Sbjct: 421 WYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN 480

Query: 481 DYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPNI 540
           DYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPNI
Sbjct: 481 DYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPNI 540

Query: 541 LERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSFDLIFSM 600
           LERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSFDLIFSM
Sbjct: 541 LERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSFDLIFSM 600

Query: 601 NFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVELSPSSPNSYQLYSSIFSWLDECSFDE 660
           NFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVELSPSSPNSYQLYSSIFSWLDECSFDE
Sbjct: 601 NFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVELSPSSPNSYQLYSSIFSWLDECSFDE 660

Query: 661 IFTMENS 668
           IFTMENS
Sbjct: 661 IFTMENS 667

[Close]

BLAST of CSPI01G21580 vs. ExPASy TrEMBL
Match: A0A5A7UUB3 (RimM domain-containing protein/PRC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00070 PE=3 SV=1)

HSP 1 Score: 1198.3 bits (3099), Expect = 0.0e+00
Identity = 604/667 (90.55%), Postives = 631/667 (94.60%), Query Frame = 0


Query: 1   MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPLYHLHSSAHSQ 60
           M   SPLCSSTSF H FPNISILNRC++LFRRRLPLTCKGSASLILQLPLYHLH  A S 
Sbjct: 1   MLRASPLCSSTSFSHYFPNISILNRCTRLFRRRLPLTCKGSASLILQLPLYHLHCFALSH 60

Query: 61  PSRRRVASSEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQ 120
           PSRRRVA+SEI ETVEAPSGFVEIGYISNVHGT+GEVRVKP TDFPELRFSTPGTRWLKQ
Sbjct: 61  PSRRRVATSEIFETVEAPSGFVEIGYISNVHGTDGEVRVKPTTDFPELRFSTPGTRWLKQ 120

Query: 121 QVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGE 180
           +VSGREEIREVDLE+GREHPGRKSWILKFIG+DTADQAKLLIGSTLLV EEDRPELEEGE
Sbjct: 121 KVSGREEIREVDLENGREHPGRKSWILKFIGVDTADQAKLLIGSTLLVNEEDRPELEEGE 180

Query: 181 FYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVS 240
           FYSRDLVGMSVI+KET QSLGTVVNV+D G  DLLHVMLN SE ILDTSGNPTSIET +S
Sbjct: 181 FYSRDLVGMSVIMKETGQSLGTVVNVYDFGAQDLLHVMLNCSEGILDTSGNPTSIETGLS 240

Query: 241 GRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQKC 300
           G L+WIPFVEAIVPIVDLQRRE+KITPPKGLLELNF+SD+RSKKERRQLEWKERKKFQK 
Sbjct: 241 GHLVWIPFVEAIVPIVDLQRREIKITPPKGLLELNFRSDKRSKKERRQLEWKERKKFQKH 300

Query: 301 LVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLTVN 360
           LVAAKK+LSEMEQ+HVFDGFKFGEK QGKLLADQIVGINSKLLQKALQDIEIPTRRL VN
Sbjct: 301 LVAAKKELSEMEQKHVFDGFKFGEKAQGKLLADQIVGINSKLLQKALQDIEIPTRRLAVN 360

Query: 361 ELFDASKLVKVQNTLGISDRCVISCANEEELGTHANLQKNGLDLISSGKIAIVLVVNDEG 420
           ELFDASKLVKVQNTLGISDRCVIS ANEEELGTHANLQK G DLISSGK A++LVVNDEG
Sbjct: 361 ELFDASKLVKVQNTLGISDRCVISGANEEELGTHANLQKTGHDLISSGKTAVILVVNDEG 420

Query: 421 WYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN 480
           WYS+LG+VCD ADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN
Sbjct: 421 WYSDLGIVCDTADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN 480

Query: 481 DYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPNI 540
           DYFAFDSEKIWFLKEERLPVVSNVVDE+SKFKILMKSPWEILQSPVGSGGVINLLSSPN+
Sbjct: 481 DYFAFDSEKIWFLKEERLPVVSNVVDEKSKFKILMKSPWEILQSPVGSGGVINLLSSPNV 540

Query: 541 LERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSFDLIFSM 600
           L RL ELGMEYVEICSS+HRNAGMNSLLLG THSC AN+GIQLHKG+ DFEKSFDLIFSM
Sbjct: 541 LGRLAELGMEYVEICSSSHRNAGMNSLLLGCTHSCGANIGIQLHKGDADFEKSFDLIFSM 600

Query: 601 NFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVELSPSSPNSYQLYSSIFSWLDECSFDE 660
           NFIR+LMKQIDKPQFYAIPK NAHVEKVEKEWVE+SPSSPNSY LYSSIFS LDECSFDE
Sbjct: 601 NFIRRLMKQIDKPQFYAIPKPNAHVEKVEKEWVEVSPSSPNSYHLYSSIFSCLDECSFDE 660

Query: 661 IFTMENS 668
           IFTMENS
Sbjct: 661 IFTMENS 667

[Close]

BLAST of CSPI01G21580 vs. ExPASy TrEMBL
Match: A0A1S3BFX4 (LOW QUALITY PROTEIN: uncharacterized protein LOC103489403 OS=Cucumis melo OX=3656 GN=LOC103489403 PE=3 SV=1)

HSP 1 Score: 1142.1 bits (2953), Expect = 0.0e+00
Identity = 583/667 (87.41%), Postives = 608/667 (91.15%), Query Frame = 0


Query: 1   MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPLYHLHSSAHSQ 60
           M   SPLCSSTSF H FPNISILNRC+QLFRRRLPLTCKGSASLILQLPLYHLH  A S 
Sbjct: 1   MLRASPLCSSTSFSHYFPNISILNRCTQLFRRRLPLTCKGSASLILQLPLYHLHCFALSH 60

Query: 61  PSRRRVASSEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQ 120
           PSRRRVA+SEI ETVEAPSGFVEIGYISNVHGT+GEVRVKP TDFPELRFSTPGTRWLKQ
Sbjct: 61  PSRRRVATSEIFETVEAPSGFVEIGYISNVHGTDGEVRVKPTTDFPELRFSTPGTRWLKQ 120

Query: 121 QVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGE 180
           +VSGREEIREVDLE+GREHPGRKSWILKFIG+DTADQAKLLIGSTLLV EED        
Sbjct: 121 KVSGREEIREVDLENGREHPGRKSWILKFIGVDTADQAKLLIGSTLLVNEED-------- 180

Query: 181 FYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVS 240
                         ET QSLGTVVNV+D G  DLLHVMLN SE ILDTSGNPTSIET +S
Sbjct: 181 --------------ETGQSLGTVVNVYDFGAQDLLHVMLNCSEGILDTSGNPTSIETGLS 240

Query: 241 GRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQKC 300
           G L+WIPFVEAIVPIVDLQRRE+KITPPKGLLELNF+SD+RSKKERRQLEWKERKKFQK 
Sbjct: 241 GHLVWIPFVEAIVPIVDLQRREIKITPPKGLLELNFRSDKRSKKERRQLEWKERKKFQKH 300

Query: 301 LVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLTVN 360
           LVAAKK+LSEMEQ+HVFDGFKFGEK QGKLLADQIVGINSKLLQKALQDIEIPTRRL VN
Sbjct: 301 LVAAKKELSEMEQKHVFDGFKFGEKAQGKLLADQIVGINSKLLQKALQDIEIPTRRLAVN 360

Query: 361 ELFDASKLVKVQNTLGISDRCVISCANEEELGTHANLQKNGLDLISSGKIAIVLVVNDEG 420
           ELFDASKLVKVQNTLGISDRCVIS ANEEELGTHANLQK G DLISSGK A++LVVNDEG
Sbjct: 361 ELFDASKLVKVQNTLGISDRCVISGANEEELGTHANLQKTGHDLISSGKTAVILVVNDEG 420

Query: 421 WYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN 480
           WYS+LG+VCD ADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN
Sbjct: 421 WYSDLGIVCDTADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN 480

Query: 481 DYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPNI 540
           DYFAFDSEKIWFLKEE LPVVSNVVDE+SKFKILMKSPWEILQSPVGSGGVINLLSSPN+
Sbjct: 481 DYFAFDSEKIWFLKEEGLPVVSNVVDEKSKFKILMKSPWEILQSPVGSGGVINLLSSPNV 540

Query: 541 LERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSFDLIFSM 600
           L RL ELGMEYVEICSS+HRNAGMNSLLLG THSC AN+GIQLHKG+ DFEKSFDLIFSM
Sbjct: 541 LGRLAELGMEYVEICSSSHRNAGMNSLLLGCTHSCGANIGIQLHKGDADFEKSFDLIFSM 600

Query: 601 NFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVELSPSSPNSYQLYSSIFSWLDECSFDE 660
           NFIR+LMKQIDKPQFYAIPK NAHVEKVEKEWVE+SPSSPNSY LYSSIFS LDECSFDE
Sbjct: 601 NFIRRLMKQIDKPQFYAIPKPNAHVEKVEKEWVEVSPSSPNSYHLYSSIFSCLDECSFDE 645

Query: 661 IFTMENS 668
           IFTMENS
Sbjct: 661 IFTMENS 645

[Close]

BLAST of CSPI01G21580 vs. ExPASy TrEMBL
Match: A0A6J1EL23 (uncharacterized protein LOC111434278 OS=Cucurbita moschata OX=3662 GN=LOC111434278 PE=3 SV=1)

HSP 1 Score: 1102.0 bits (2849), Expect = 0.0e+00
Identity = 546/666 (81.98%), Postives = 612/666 (91.89%), Query Frame = 0


Query: 1   MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPLY-HLHSSAHS 60
           MQ TSPLCSS+SF HSFP IS+LNRC++ FRRR+ LTCKGSA  ILQLPLY HLH+    
Sbjct: 2   MQRTSPLCSSSSFSHSFPYISVLNRCTEPFRRRIALTCKGSAFSILQLPLYRHLHTLPRL 61

Query: 61  QPSRRRVASSEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLK 120
           QPSRRRVA+S+ILE+VEAP+GFVEIGYISNVHGTEGEVRVKP+TDFPELRFSTPGTRWLK
Sbjct: 62  QPSRRRVATSQILESVEAPTGFVEIGYISNVHGTEGEVRVKPVTDFPELRFSTPGTRWLK 121

Query: 121 QQVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEG 180
           QQVSGREEIREVDLE+GREHPGRKSWILKF GIDTA+QAKLLIGSTLLV+EEDRPELEEG
Sbjct: 122 QQVSGREEIREVDLEEGREHPGRKSWILKFKGIDTAEQAKLLIGSTLLVREEDRPELEEG 181

Query: 181 EFYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRV 240
           EFYSRDL+GMSVILKET QSLGTVVNVFDSGGADLLHV+L+SSEDILD +GNPTS ET V
Sbjct: 182 EFYSRDLIGMSVILKETGQSLGTVVNVFDSGGADLLHVLLDSSEDILDATGNPTSTETGV 241

Query: 241 SGRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQK 300
           SGRL+WIPFV+AIVP+VDL+RREMKITPPKGLLELN  S++RSKKERRQLEWKERKKFQ 
Sbjct: 242 SGRLVWIPFVKAIVPVVDLERREMKITPPKGLLELNLNSNKRSKKERRQLEWKERKKFQN 301

Query: 301 CLVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLTV 360
            L+AAKKKLSEMEQ+HVF+GFKFGEK QG+LLA+QIVG+NSKLLQKALQDIEIPTRRL V
Sbjct: 302 SLIAAKKKLSEMEQKHVFNGFKFGEKMQGRLLAEQIVGVNSKLLQKALQDIEIPTRRLNV 361

Query: 361 NELFDASKLVKVQNTLGISDRCVISCANEEELGTHANLQKNGLDLISSGKIAIVLVVNDE 420
           NELF+A +L K+QNTL +SD+CV S ANEEELG H +LQK GL+LISSGK A+VLVVNDE
Sbjct: 362 NELFNAFELEKIQNTLKVSDKCVTSGANEEELGKHTSLQKKGLNLISSGKTAVVLVVNDE 421

Query: 421 GWYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVD 480
           GWY++L +VCD A+HP SSSLPDLL DDRRFAKIEDRPYVPLILVCSAS IHSIEKLF+D
Sbjct: 422 GWYADLDIVCDNAEHPTSSSLPDLLGDDRRFAKIEDRPYVPLILVCSASRIHSIEKLFMD 481

Query: 481 NDYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPN 540
           NDYF+FDS KIWFL+E+RLPVVSNVVDEQ+K+KILMKSPWEILQSPVGSGGVINLLSS  
Sbjct: 482 NDYFSFDSGKIWFLEEQRLPVVSNVVDEQNKYKILMKSPWEILQSPVGSGGVINLLSSSK 541

Query: 541 ILERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSFDLIFS 600
           +L+ L E+G+EYVEICSS HR+AG N+LLLGY  SCSAN+G++L KG+  FEKSF+LIFS
Sbjct: 542 VLDNLAEIGVEYVEICSSRHRSAGTNALLLGYIASCSANIGVKLQKGSSGFEKSFELIFS 601

Query: 601 MNFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVELSPSSPNSYQLYSSIFSWLDECSFD 660
           MNF++K+MKQ+DKPQFY IPKSNAHVEKV+KEWV++SPSSPNSYQL SSIFSWL ECSFD
Sbjct: 602 MNFMKKMMKQMDKPQFYGIPKSNAHVEKVDKEWVDVSPSSPNSYQLCSSIFSWLHECSFD 661

Query: 661 EIFTME 666
           EI  ME
Sbjct: 662 EICMME 667

[Close]

BLAST of CSPI01G21580 vs. ExPASy TrEMBL
Match: A0A6J1KQE9 (uncharacterized protein LOC111495546 OS=Cucurbita maxima OX=3661 GN=LOC111495546 PE=3 SV=1)

HSP 1 Score: 1088.6 bits (2814), Expect = 0.0e+00
Identity = 542/666 (81.38%), Postives = 606/666 (90.99%), Query Frame = 0


Query: 1   MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPL-YHLHSSAHS 60
           MQ TSPLCSS+SF HS P IS+LNRC++  RRR+ LTCKGSA  ILQLPL  HLH+    
Sbjct: 2   MQRTSPLCSSSSFSHSSPYISVLNRCTEPLRRRIALTCKGSAFSILQLPLNRHLHTLPLL 61

Query: 61  QPSRRRVASSEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLK 120
           QPSRRRVA+S+ILE+VEAP+GFVEIGYISNVHGTEGEVRVK +TDFPELRFSTPGTRWLK
Sbjct: 62  QPSRRRVATSQILESVEAPTGFVEIGYISNVHGTEGEVRVKSVTDFPELRFSTPGTRWLK 121

Query: 121 QQVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEG 180
           QQVSGREEIREVDLE+GREHPGRKSWILKF GIDTA+QAKLLIGSTLLV+EEDRPELEEG
Sbjct: 122 QQVSGREEIREVDLEEGREHPGRKSWILKFKGIDTAEQAKLLIGSTLLVREEDRPELEEG 181

Query: 181 EFYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRV 240
           EFYSRDL+GMSVILKET QSLGTVVNVFDSGGADLLHVML+SSEDILDT+GNPTS ET V
Sbjct: 182 EFYSRDLIGMSVILKETGQSLGTVVNVFDSGGADLLHVMLDSSEDILDTTGNPTSTETGV 241

Query: 241 SGRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQK 300
           SGRL+WIPFV+AIVP+VDL+RREMKITPPKGLLELN  S++RSKKERRQLEWKERKKFQ 
Sbjct: 242 SGRLVWIPFVKAIVPVVDLERREMKITPPKGLLELNLHSNKRSKKERRQLEWKERKKFQN 301

Query: 301 CLVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLTV 360
            L+AAKKKLSEMEQ+HVF GFKFGEK QG+LLA+QIVG+NSKLLQKALQDIEIPTRRL V
Sbjct: 302 SLIAAKKKLSEMEQKHVFSGFKFGEKIQGRLLAEQIVGVNSKLLQKALQDIEIPTRRLNV 361

Query: 361 NELFDASKLVKVQNTLGISDRCVISCANEEELGTHANLQKNGLDLISSGKIAIVLVVNDE 420
           NELF+AS+L K+QN L +SD+CV S ANEEELG H +LQK GL+LISSGK A+VLVVNDE
Sbjct: 362 NELFNASELEKIQNILKVSDKCVTSGANEEELGKHTSLQKKGLNLISSGKTAVVLVVNDE 421

Query: 421 GWYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVD 480
           GWYS+L +VCD A+HP SSSLPDLL DDRRFAKIEDRP VPLILVCSAS IHS+EKLF+D
Sbjct: 422 GWYSDLDIVCDNAEHPTSSSLPDLLGDDRRFAKIEDRPSVPLILVCSASRIHSVEKLFMD 481

Query: 481 NDYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPN 540
           NDYF+FDS KIWFL+E+RLPVVSNVVDEQ+K+KILMKSPWEILQSPVGSGGVINLLSS  
Sbjct: 482 NDYFSFDSGKIWFLEEQRLPVVSNVVDEQNKYKILMKSPWEILQSPVGSGGVINLLSSSK 541

Query: 541 ILERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSFDLIFS 600
           +L+ L E+G+EYVEICSS HR+AG N+LLLGY  SC+AN+G++L KGN D EKSF+LIFS
Sbjct: 542 VLDNLAEIGVEYVEICSSRHRSAGTNALLLGYIASCNANIGVKLQKGNSDLEKSFELIFS 601

Query: 601 MNFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVELSPSSPNSYQLYSSIFSWLDECSFD 660
           MNF++K+MKQ+DKPQFY IPKSNAHVEKV+KEWV++ PSSPNSYQL SSIFSWL ECSFD
Sbjct: 602 MNFMKKMMKQMDKPQFYGIPKSNAHVEKVDKEWVDVRPSSPNSYQLCSSIFSWLHECSFD 661

Query: 661 EIFTME 666
           EI  ME
Sbjct: 662 EICVME 667

[Close]

BLAST of CSPI01G21580 vs. NCBI nr
Match: XP_011657465.2 (uncharacterized protein LOC101214658 [Cucumis sativus] >KAE8653200.1 hypothetical protein Csa_020091 [Cucumis sativus])

HSP 1 Score: 1311.2 bits (3392), Expect = 0.0e+00
Identity = 664/667 (99.55%), Postives = 665/667 (99.70%), Query Frame = 0


Query: 1   MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPLYHLHSSAHSQ 60
           MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPLYHLHS AHSQ
Sbjct: 1   MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPLYHLHSFAHSQ 60

Query: 61  PSRRRVASSEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQ 120
           PSRRRVASSEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQ
Sbjct: 61  PSRRRVASSEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQ 120

Query: 121 QVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGE 180
           QVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGE
Sbjct: 121 QVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGE 180

Query: 181 FYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVS 240
           FYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVS
Sbjct: 181 FYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVS 240

Query: 241 GRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQKC 300
           GRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQKC
Sbjct: 241 GRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQKC 300

Query: 301 LVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLTVN 360
           LVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLTVN
Sbjct: 301 LVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLTVN 360

Query: 361 ELFDASKLVKVQNTLGISDRCVISCANEEELGTHANLQKNGLDLISSGKIAIVLVVNDEG 420
           ELFDASKLVKVQNTLGISDRCVIS ANEEELGTHANLQKNGLDLISSGKIAIVLVVNDEG
Sbjct: 361 ELFDASKLVKVQNTLGISDRCVISGANEEELGTHANLQKNGLDLISSGKIAIVLVVNDEG 420

Query: 421 WYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN 480
           WYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN
Sbjct: 421 WYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN 480

Query: 481 DYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPNI 540
           DYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPNI
Sbjct: 481 DYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPNI 540

Query: 541 LERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSFDLIFSM 600
           LERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSFDLIFSM
Sbjct: 541 LERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSFDLIFSM 600

Query: 601 NFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVELSPSSPNSYQLYSSIFSWLDECSFDE 660
           NFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVE+SPSSPNSYQLYSSIFSWLDECSFDE
Sbjct: 601 NFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVEVSPSSPNSYQLYSSIFSWLDECSFDE 660

Query: 661 IFTMENS 668
           IFTMENS
Sbjct: 661 IFTMENS 667

[Close]

BLAST of CSPI01G21580 vs. NCBI nr
Match: KAA0057091.1 (RimM domain-containing protein/PRC domain-containing protein [Cucumis melo var. makuwa] >TYK20626.1 RimM domain-containing protein/PRC domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1198.3 bits (3099), Expect = 0.0e+00
Identity = 604/667 (90.55%), Postives = 631/667 (94.60%), Query Frame = 0


Query: 1   MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPLYHLHSSAHSQ 60
           M   SPLCSSTSF H FPNISILNRC++LFRRRLPLTCKGSASLILQLPLYHLH  A S 
Sbjct: 1   MLRASPLCSSTSFSHYFPNISILNRCTRLFRRRLPLTCKGSASLILQLPLYHLHCFALSH 60

Query: 61  PSRRRVASSEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQ 120
           PSRRRVA+SEI ETVEAPSGFVEIGYISNVHGT+GEVRVKP TDFPELRFSTPGTRWLKQ
Sbjct: 61  PSRRRVATSEIFETVEAPSGFVEIGYISNVHGTDGEVRVKPTTDFPELRFSTPGTRWLKQ 120

Query: 121 QVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGE 180
           +VSGREEIREVDLE+GREHPGRKSWILKFIG+DTADQAKLLIGSTLLV EEDRPELEEGE
Sbjct: 121 KVSGREEIREVDLENGREHPGRKSWILKFIGVDTADQAKLLIGSTLLVNEEDRPELEEGE 180

Query: 181 FYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVS 240
           FYSRDLVGMSVI+KET QSLGTVVNV+D G  DLLHVMLN SE ILDTSGNPTSIET +S
Sbjct: 181 FYSRDLVGMSVIMKETGQSLGTVVNVYDFGAQDLLHVMLNCSEGILDTSGNPTSIETGLS 240

Query: 241 GRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQKC 300
           G L+WIPFVEAIVPIVDLQRRE+KITPPKGLLELNF+SD+RSKKERRQLEWKERKKFQK 
Sbjct: 241 GHLVWIPFVEAIVPIVDLQRREIKITPPKGLLELNFRSDKRSKKERRQLEWKERKKFQKH 300

Query: 301 LVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLTVN 360
           LVAAKK+LSEMEQ+HVFDGFKFGEK QGKLLADQIVGINSKLLQKALQDIEIPTRRL VN
Sbjct: 301 LVAAKKELSEMEQKHVFDGFKFGEKAQGKLLADQIVGINSKLLQKALQDIEIPTRRLAVN 360

Query: 361 ELFDASKLVKVQNTLGISDRCVISCANEEELGTHANLQKNGLDLISSGKIAIVLVVNDEG 420
           ELFDASKLVKVQNTLGISDRCVIS ANEEELGTHANLQK G DLISSGK A++LVVNDEG
Sbjct: 361 ELFDASKLVKVQNTLGISDRCVISGANEEELGTHANLQKTGHDLISSGKTAVILVVNDEG 420

Query: 421 WYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN 480
           WYS+LG+VCD ADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN
Sbjct: 421 WYSDLGIVCDTADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN 480

Query: 481 DYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPNI 540
           DYFAFDSEKIWFLKEERLPVVSNVVDE+SKFKILMKSPWEILQSPVGSGGVINLLSSPN+
Sbjct: 481 DYFAFDSEKIWFLKEERLPVVSNVVDEKSKFKILMKSPWEILQSPVGSGGVINLLSSPNV 540

Query: 541 LERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSFDLIFSM 600
           L RL ELGMEYVEICSS+HRNAGMNSLLLG THSC AN+GIQLHKG+ DFEKSFDLIFSM
Sbjct: 541 LGRLAELGMEYVEICSSSHRNAGMNSLLLGCTHSCGANIGIQLHKGDADFEKSFDLIFSM 600

Query: 601 NFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVELSPSSPNSYQLYSSIFSWLDECSFDE 660
           NFIR+LMKQIDKPQFYAIPK NAHVEKVEKEWVE+SPSSPNSY LYSSIFS LDECSFDE
Sbjct: 601 NFIRRLMKQIDKPQFYAIPKPNAHVEKVEKEWVEVSPSSPNSYHLYSSIFSCLDECSFDE 660

Query: 661 IFTMENS 668
           IFTMENS
Sbjct: 661 IFTMENS 667

[Close]

BLAST of CSPI01G21580 vs. NCBI nr
Match: XP_008446779.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103489403 [Cucumis melo])

HSP 1 Score: 1142.1 bits (2953), Expect = 0.0e+00
Identity = 583/667 (87.41%), Postives = 608/667 (91.15%), Query Frame = 0


Query: 1   MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPLYHLHSSAHSQ 60
           M   SPLCSSTSF H FPNISILNRC+QLFRRRLPLTCKGSASLILQLPLYHLH  A S 
Sbjct: 1   MLRASPLCSSTSFSHYFPNISILNRCTQLFRRRLPLTCKGSASLILQLPLYHLHCFALSH 60

Query: 61  PSRRRVASSEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLKQ 120
           PSRRRVA+SEI ETVEAPSGFVEIGYISNVHGT+GEVRVKP TDFPELRFSTPGTRWLKQ
Sbjct: 61  PSRRRVATSEIFETVEAPSGFVEIGYISNVHGTDGEVRVKPTTDFPELRFSTPGTRWLKQ 120

Query: 121 QVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEGE 180
           +VSGREEIREVDLE+GREHPGRKSWILKFIG+DTADQAKLLIGSTLLV EED        
Sbjct: 121 KVSGREEIREVDLENGREHPGRKSWILKFIGVDTADQAKLLIGSTLLVNEED-------- 180

Query: 181 FYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRVS 240
                         ET QSLGTVVNV+D G  DLLHVMLN SE ILDTSGNPTSIET +S
Sbjct: 181 --------------ETGQSLGTVVNVYDFGAQDLLHVMLNCSEGILDTSGNPTSIETGLS 240

Query: 241 GRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQKC 300
           G L+WIPFVEAIVPIVDLQRRE+KITPPKGLLELNF+SD+RSKKERRQLEWKERKKFQK 
Sbjct: 241 GHLVWIPFVEAIVPIVDLQRREIKITPPKGLLELNFRSDKRSKKERRQLEWKERKKFQKH 300

Query: 301 LVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLTVN 360
           LVAAKK+LSEMEQ+HVFDGFKFGEK QGKLLADQIVGINSKLLQKALQDIEIPTRRL VN
Sbjct: 301 LVAAKKELSEMEQKHVFDGFKFGEKAQGKLLADQIVGINSKLLQKALQDIEIPTRRLAVN 360

Query: 361 ELFDASKLVKVQNTLGISDRCVISCANEEELGTHANLQKNGLDLISSGKIAIVLVVNDEG 420
           ELFDASKLVKVQNTLGISDRCVIS ANEEELGTHANLQK G DLISSGK A++LVVNDEG
Sbjct: 361 ELFDASKLVKVQNTLGISDRCVISGANEEELGTHANLQKTGHDLISSGKTAVILVVNDEG 420

Query: 421 WYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN 480
           WYS+LG+VCD ADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN
Sbjct: 421 WYSDLGIVCDTADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVDN 480

Query: 481 DYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPNI 540
           DYFAFDSEKIWFLKEE LPVVSNVVDE+SKFKILMKSPWEILQSPVGSGGVINLLSSPN+
Sbjct: 481 DYFAFDSEKIWFLKEEGLPVVSNVVDEKSKFKILMKSPWEILQSPVGSGGVINLLSSPNV 540

Query: 541 LERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSFDLIFSM 600
           L RL ELGMEYVEICSS+HRNAGMNSLLLG THSC AN+GIQLHKG+ DFEKSFDLIFSM
Sbjct: 541 LGRLAELGMEYVEICSSSHRNAGMNSLLLGCTHSCGANIGIQLHKGDADFEKSFDLIFSM 600

Query: 601 NFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVELSPSSPNSYQLYSSIFSWLDECSFDE 660
           NFIR+LMKQIDKPQFYAIPK NAHVEKVEKEWVE+SPSSPNSY LYSSIFS LDECSFDE
Sbjct: 601 NFIRRLMKQIDKPQFYAIPKPNAHVEKVEKEWVEVSPSSPNSYHLYSSIFSCLDECSFDE 645

Query: 661 IFTMENS 668
           IFTMENS
Sbjct: 661 IFTMENS 645

[Close]

BLAST of CSPI01G21580 vs. NCBI nr
Match: KAG6583928.1 (hypothetical protein SDJN03_19860, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1102.4 bits (2850), Expect = 0.0e+00
Identity = 547/666 (82.13%), Postives = 611/666 (91.74%), Query Frame = 0


Query: 1   MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPLY-HLHSSAHS 60
           MQ TSPLCSS+SF HSFP IS+LNRC++ FRRR+ LTCKGSA  ILQLPLY HLH+    
Sbjct: 2   MQRTSPLCSSSSFSHSFPYISVLNRCTEPFRRRIALTCKGSAFSILQLPLYRHLHTLPRL 61

Query: 61  QPSRRRVASSEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLK 120
           QPSRRRVA+S+ILE+VEAP+GFVEIGYISNVHGTEGEVRVKP+TDFPELRFSTPGTRWLK
Sbjct: 62  QPSRRRVATSQILESVEAPTGFVEIGYISNVHGTEGEVRVKPVTDFPELRFSTPGTRWLK 121

Query: 121 QQVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEG 180
           QQVSGREEIREVDLE+GREHPGRKSWILKF GIDTA+QAKLLIGSTLLV+EEDRPELEEG
Sbjct: 122 QQVSGREEIREVDLEEGREHPGRKSWILKFKGIDTAEQAKLLIGSTLLVREEDRPELEEG 181

Query: 181 EFYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRV 240
           EFYSRDL+GMSVILKET QSLGTVVNVFDSGGADLLHV+L+SSEDILD SGNPTS ET V
Sbjct: 182 EFYSRDLIGMSVILKETGQSLGTVVNVFDSGGADLLHVLLDSSEDILDASGNPTSTETGV 241

Query: 241 SGRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQK 300
           SGRL+WIPFV+AIVP+VDL+RREMKITPPKGLLELN  S++RSKKERRQLEWKERKKFQ 
Sbjct: 242 SGRLVWIPFVKAIVPVVDLERREMKITPPKGLLELNLNSNKRSKKERRQLEWKERKKFQN 301

Query: 301 CLVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLTV 360
            L+AAKKKLSEMEQ+HVF+GFKFGEK QG+LLA+QIVG+NSKLLQKALQDIEIPTRRL V
Sbjct: 302 SLIAAKKKLSEMEQKHVFNGFKFGEKMQGRLLAEQIVGVNSKLLQKALQDIEIPTRRLNV 361

Query: 361 NELFDASKLVKVQNTLGISDRCVISCANEEELGTHANLQKNGLDLISSGKIAIVLVVNDE 420
           NELF+A +L K+QNTL +SD+CV S ANEEELG H +LQK GL+LISSGK A+VLVVNDE
Sbjct: 362 NELFNAFELEKIQNTLKVSDKCVTSGANEEELGKHTSLQKKGLNLISSGKTAVVLVVNDE 421

Query: 421 GWYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVD 480
           GWYS+L +VCD A+HP S SLPDLL DDRRFAKIEDRPYVPLILVCSAS IHSIEKLF+D
Sbjct: 422 GWYSDLDIVCDNAEHPTSCSLPDLLGDDRRFAKIEDRPYVPLILVCSASRIHSIEKLFMD 481

Query: 481 NDYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPN 540
           NDYF+FDS KIWFL+E+RLPVVSNVVDEQ+K+KILMKSPWEILQSPVGSGGVINLLSS  
Sbjct: 482 NDYFSFDSGKIWFLEEQRLPVVSNVVDEQNKYKILMKSPWEILQSPVGSGGVINLLSSSK 541

Query: 541 ILERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSFDLIFS 600
           +L+ L E+G+EYVEICSS HR+AG N+LLLGY  SCSAN+G++L KG+  FEKSF+LIFS
Sbjct: 542 VLDNLAEIGVEYVEICSSRHRSAGTNALLLGYIASCSANIGVKLQKGSSGFEKSFELIFS 601

Query: 601 MNFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVELSPSSPNSYQLYSSIFSWLDECSFD 660
           MNF++K+MKQ+DKPQFY IPKSNAHVEKV+KEWV++SPSSPNSYQL SSIFSWL ECSFD
Sbjct: 602 MNFMKKMMKQMDKPQFYGIPKSNAHVEKVDKEWVDVSPSSPNSYQLCSSIFSWLHECSFD 661

Query: 661 EIFTME 666
           EI  ME
Sbjct: 662 EICMME 667

[Close]

BLAST of CSPI01G21580 vs. NCBI nr
Match: XP_022927458.1 (uncharacterized protein LOC111434278 [Cucurbita moschata])

HSP 1 Score: 1102.0 bits (2849), Expect = 0.0e+00
Identity = 546/666 (81.98%), Postives = 612/666 (91.89%), Query Frame = 0


Query: 1   MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPLY-HLHSSAHS 60
           MQ TSPLCSS+SF HSFP IS+LNRC++ FRRR+ LTCKGSA  ILQLPLY HLH+    
Sbjct: 2   MQRTSPLCSSSSFSHSFPYISVLNRCTEPFRRRIALTCKGSAFSILQLPLYRHLHTLPRL 61

Query: 61  QPSRRRVASSEILETVEAPSGFVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWLK 120
           QPSRRRVA+S+ILE+VEAP+GFVEIGYISNVHGTEGEVRVKP+TDFPELRFSTPGTRWLK
Sbjct: 62  QPSRRRVATSQILESVEAPTGFVEIGYISNVHGTEGEVRVKPVTDFPELRFSTPGTRWLK 121

Query: 121 QQVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEEG 180
           QQVSGREEIREVDLE+GREHPGRKSWILKF GIDTA+QAKLLIGSTLLV+EEDRPELEEG
Sbjct: 122 QQVSGREEIREVDLEEGREHPGRKSWILKFKGIDTAEQAKLLIGSTLLVREEDRPELEEG 181

Query: 181 EFYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETRV 240
           EFYSRDL+GMSVILKET QSLGTVVNVFDSGGADLLHV+L+SSEDILD +GNPTS ET V
Sbjct: 182 EFYSRDLIGMSVILKETGQSLGTVVNVFDSGGADLLHVLLDSSEDILDATGNPTSTETGV 241

Query: 241 SGRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQK 300
           SGRL+WIPFV+AIVP+VDL+RREMKITPPKGLLELN  S++RSKKERRQLEWKERKKFQ 
Sbjct: 242 SGRLVWIPFVKAIVPVVDLERREMKITPPKGLLELNLNSNKRSKKERRQLEWKERKKFQN 301

Query: 301 CLVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLTV 360
            L+AAKKKLSEMEQ+HVF+GFKFGEK QG+LLA+QIVG+NSKLLQKALQDIEIPTRRL V
Sbjct: 302 SLIAAKKKLSEMEQKHVFNGFKFGEKMQGRLLAEQIVGVNSKLLQKALQDIEIPTRRLNV 361

Query: 361 NELFDASKLVKVQNTLGISDRCVISCANEEELGTHANLQKNGLDLISSGKIAIVLVVNDE 420
           NELF+A +L K+QNTL +SD+CV S ANEEELG H +LQK GL+LISSGK A+VLVVNDE
Sbjct: 362 NELFNAFELEKIQNTLKVSDKCVTSGANEEELGKHTSLQKKGLNLISSGKTAVVLVVNDE 421

Query: 421 GWYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFVD 480
           GWY++L +VCD A+HP SSSLPDLL DDRRFAKIEDRPYVPLILVCSAS IHSIEKLF+D
Sbjct: 422 GWYADLDIVCDNAEHPTSSSLPDLLGDDRRFAKIEDRPYVPLILVCSASRIHSIEKLFMD 481

Query: 481 NDYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSPN 540
           NDYF+FDS KIWFL+E+RLPVVSNVVDEQ+K+KILMKSPWEILQSPVGSGGVINLLSS  
Sbjct: 482 NDYFSFDSGKIWFLEEQRLPVVSNVVDEQNKYKILMKSPWEILQSPVGSGGVINLLSSSK 541

Query: 541 ILERLTELGMEYVEICSSNHRNAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSFDLIFS 600
           +L+ L E+G+EYVEICSS HR+AG N+LLLGY  SCSAN+G++L KG+  FEKSF+LIFS
Sbjct: 542 VLDNLAEIGVEYVEICSSRHRSAGTNALLLGYIASCSANIGVKLQKGSSGFEKSFELIFS 601

Query: 601 MNFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVELSPSSPNSYQLYSSIFSWLDECSFD 660
           MNF++K+MKQ+DKPQFY IPKSNAHVEKV+KEWV++SPSSPNSYQL SSIFSWL ECSFD
Sbjct: 602 MNFMKKMMKQMDKPQFYGIPKSNAHVEKVDKEWVDVSPSSPNSYQLCSSIFSWLHECSFD 661

Query: 661 EIFTME 666
           EI  ME
Sbjct: 662 EICMME 667

[Close]

BLAST of CSPI01G21580 vs. TAIR 10
Match: AT5G46420.1 (16S rRNA processing protein RimM family )

HSP 1 Score: 579.3 bits (1492), Expect = 3.9e-165
Identity = 324/663 (48.87%), Postives = 445/663 (67.12%), Query Frame = 0


Query: 1   MQSTSPLCSSTSFFHSFPNISILNRCSQLFRRRLPLTCKGSASLILQLPLYHLHSSAHSQ 60
           M   S LCSSTS   +F  I + N  S     R  L+   SA    +  L  L +   S 
Sbjct: 1   MLRASLLCSSTSI--TFTPIQLFNPNSSHRFPRFELSRPVSALSRTKCHLSLLRARGKSS 60

Query: 61  PSRRRVASSEILETVEAPSG--FVEIGYISNVHGTEGEVRVKPITDFPELRFSTPGTRWL 120
              R  A+ E +ET  + SG   VE+G++S VHG +GE+ +KP TDFP+LRFS PG RWL
Sbjct: 61  FLTRSTATDEAVET-SSNSGLDLVEVGFLSGVHGLQGEICIKPNTDFPDLRFSKPGRRWL 120

Query: 121 KQQVSGREEIREVDLEDGREHPGRKSWILKFIGIDTADQAKLLIGSTLLVKEEDRPELEE 180
           KQQ+ G+++I EV+L +GR HP +KSWILKF G+D  DQ + L+G+TLL +++DRPEL+E
Sbjct: 121 KQQLLGQDKIDEVELVEGRPHPAQKSWILKFRGLDDVDQVRQLVGATLLAEDDDRPELDE 180

Query: 181 GEFYSRDLVGMSVILKETSQSLGTVVNVFDSGGADLLHVMLNSSEDILDTSGNPTSIETR 240
           GEFYSRDLVGM V+LKET Q +GTV N+FD+GG DLLHV+L+SS ++   +GN       
Sbjct: 181 GEFYSRDLVGMRVLLKETGQLVGTVANIFDNGGNDLLHVLLDSSMEV--CNGNAK----- 240

Query: 241 VSGRLIWIPFVEAIVPIVDLQRREMKITPPKGLLELNFQSDERSKKERRQLEWKERKKFQ 300
            + +L+WIPFV+AIVP VDL+R+EM ITPPKGLLE+N ++D+RSKKERRQLEWKERKK Q
Sbjct: 241 -TNQLVWIPFVDAIVPDVDLERKEMYITPPKGLLEVNMRADDRSKKERRQLEWKERKKQQ 300

Query: 301 KCLVAAKKKLSEMEQEHVFDGFKFGEKDQGKLLADQIVGINSKLLQKALQDIEIPTRRLT 360
           K L+AAKKKL EMEQ+HVFDG +FGEK Q  LLAD I+ +NS LLQKALQ I+  ++R  
Sbjct: 301 KRLIAAKKKLCEMEQKHVFDGLRFGEKSQRNLLADHILNVNSTLLQKALQSIDTSSKRWN 360

Query: 361 VNELFDASKLVKVQNTLGISDRCVISCANEEELGTHANLQKNGLDLISSGKIAIVLVVND 420
           V E  +A +    +  L +S  C+   A++E +G + +  + G +L S GK++I LV+ND
Sbjct: 361 VTEEINALRARVSECNLSVSRECLSFDASKENMGDNFSFLQQGQNLFSEGKVSICLVLND 420

Query: 421 EGWYSNLGLVCDIADHPASSSLPDLLSDDRRFAKIEDRPYVPLILVCSASTIHSIEKLFV 480
                  G      ++   S L  LL +++RF K EDR  VPL++V    TI +++KLF 
Sbjct: 421 HENEEPEG------ENGVVSYLHALLDEEQRFIKEEDRACVPLVIVSPEHTIEALQKLFQ 480

Query: 481 DNDYFAFDSEKIWFLKEERLPVVSNVVDEQSKFKILMKSPWEILQSPVGSGGVINLLSSP 540
           DND+F F+SEKIW LKEE LPVV +  +E  K KILMKSPWEIL+SPVGSGGV+++L+S 
Sbjct: 481 DNDHFGFESEKIWILKEETLPVVCSSPEEPKKHKILMKSPWEILESPVGSGGVLSILASH 540

Query: 541 NILERLTELGMEYVEICSSNHR----NAGMNSLLLGYTHSCSANVGIQLHKGNGDFEKSF 600
              + L+ LG+ Y+++ S   +       +N +L+G+  +  A +GIQ+ + +    K+ 
Sbjct: 541 GTTDSLSTLGINYLQVHSIETKPQPSQHYINPMLVGFVSARGAEIGIQVTEESE--LKNL 600

Query: 601 DLIFSMNFIRKLMKQIDKPQFYAIPKSNAHVEKVEKEWVELSPSSPNSYQLYSSIFSWLD 658
           ++ FSM F+++L  +I   +F A+ K N+HV+ VEKEWVE  PS PNS++  S I+  L 
Sbjct: 601 EMTFSMKFLKRLKGKI---EFEAVMKMNSHVQNVEKEWVESVPSEPNSFEFRSDIYRVLS 641

The following BLAST results are available for this feature:

BLAST of CSPI01G21580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A5GI62	3.1e-34	41.75	Ribosome maturation factor RimM OS=Synechococcus sp. (strain WH7803) OX=32051 GN...	[more]
Q7U9V4	1.2e-33	44.50	Ribosome maturation factor RimM OS=Synechococcus sp. (strain WH8102) OX=84588 GN...	[more]
Q0IDP0	5.9e-33	40.72	Ribosome maturation factor RimM OS=Synechococcus sp. (strain CC9311) OX=64471 GN...	[more]
Q3ANC6	2.2e-32	42.27	Ribosome maturation factor RimM OS=Synechococcus sp. (strain CC9605) OX=110662 G...	[more]
Q31KY0	5.0e-32	43.69	Ribosome maturation factor RimM OS=Synechococcus elongatus (strain PCC 7942 / FA...	[more]

BLAST of CSPI01G21580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M055	0.0e+00	99.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G461020 PE=3 SV=1	[more]
A0A5A7UUB3	0.0e+00	90.55	RimM domain-containing protein/PRC domain-containing protein OS=Cucumis melo var...	[more]
A0A1S3BFX4	0.0e+00	87.41	LOW QUALITY PROTEIN: uncharacterized protein LOC103489403 OS=Cucumis melo OX=365...	[more]
A0A6J1EL23	0.0e+00	81.98	uncharacterized protein LOC111434278 OS=Cucurbita moschata OX=3662 GN=LOC1114342...	[more]
A0A6J1KQE9	0.0e+00	81.38	uncharacterized protein LOC111495546 OS=Cucurbita maxima OX=3661 GN=LOC111495546...	[more]

BLAST of CSPI01G21580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657465.2	0.0e+00	99.55	uncharacterized protein LOC101214658 [Cucumis sativus] >KAE8653200.1 hypothetica...	[more]
KAA0057091.1	0.0e+00	90.55	RimM domain-containing protein/PRC domain-containing protein [Cucumis melo var. ...	[more]
XP_008446779.1	0.0e+00	87.41	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103489403 [Cucumis me...	[more]
KAG6583928.1	0.0e+00	82.13	hypothetical protein SDJN03_19860, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022927458.1	0.0e+00	81.98	uncharacterized protein LOC111434278 [Cucurbita moschata]	[more]

BLAST of CSPI01G21580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46420.1	3.9e-165	48.87	16S rRNA processing protein RimM family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 294..314
None	No IPR available	GENE3D	2.30.30.240		coord: 176..276 e-value: 1.1E-21 score: 78.7
None	No IPR available	PANTHER	PTHR11952:SF10	16S RRNA PROCESSING PROTEIN RIMM FAMILY	coord: 23..665
IPR027275	PRC-barrel domain	PFAM	PF05239	PRC	coord: 178..272 e-value: 1.9E-7 score: 31.0
IPR002618	UDPGP family	PFAM	PF01704	UDPGP	coord: 458..574 e-value: 1.3E-4 score: 20.8
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	coord: 298..665 e-value: 8.3E-41 score: 142.1
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 303..664
IPR002676	RimM, N-terminal	PFAM	PF01782	RimM	coord: 83..172 e-value: 3.0E-20 score: 72.2
IPR011961	16S rRNA processing protein RimM	TIGRFAM	TIGR02273	TIGR02273	coord: 82..271 e-value: 3.4E-35 score: 118.9
IPR011961	16S rRNA processing protein RimM	HAMAP	MF_00014	Ribosome_mat_RimM	coord: 81..271 score: 22.769192
IPR036976	RimM, N-terminal domain superfamily	GENE3D	2.40.30.60	RimM	coord: 73..174 e-value: 2.9E-20 score: 73.9
IPR039741	UDP-sugar pyrophosphorylase	PANTHER	PTHR11952	UDP- GLUCOSE PYROPHOSPHORYLASE	coord: 23..665
IPR011033	PRC-barrel-like superfamily	SUPERFAMILY	50346	PRC-barrel domain	coord: 181..271
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 81..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G21580.1	CSPI01G21580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006048	UDP-N-acetylglucosamine biosynthetic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003977	UDP-N-acetylglucosamine diphosphorylase activity
molecular_function	GO:0070569	uridylyltransferase activity