CSPI01G21400 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCCCCCTTTGGCGTTAATTCCTACCATTTCTGTTCTCCAAAACCTTCCGCTCGCAGGTTTTCCCAGGGACACAGAGGAAGTAGACGATTCTCAGTCGGAATGAGTTCTTCAACCGCTCTTCGAGAGGTACAGCGCGAGTTGGAGGCGAAAGCCAACGATCTCAGCAAGCTACAGAAAGGCAAGCTTCTAATCCATTCACGTTTCCTCCTTGTCGTTCATTTGATTATCACGTTTGATTGAAACACATCAATGTTTCAAATCAAATACCGTGTCGACTGTGTTATCTGGATTCAATACTATCAATTTACTTTCACGAAAAGCCTAATGTGGTGGTGGTGATGGATTTATCAGATATTGCGAAGAATCACCAAGTGAGGAAGAAGTACACTATTCAGCTGGGTGAGAACGAGCTCGTTCTTAAGGTTTTCCCACCCTTCTCACTTGTTTCCTCGTAGATTGAAGTATTTGCTTGTGTACAGTTCAGTAGCGAGGAGGGGAAGTAGGCTAAGAGACTTTTTCTGACTCGTGTATTTCTGTCCACACAGAAGTTGTAAAAAATAGAATTTCATTTTTTCGTTTCAATTTATACGTTCGTGCGTTTCAAGGGGATTTTTCTTCACTTGATTCGATATGTGGTTTAGATAATGGAAATTTCTTTACATTTATATAATCTGGCATACGATAAGAATTGAAGCATTCTTATCAGTGGACATTTTTCTCGTTTATTGCTACTACGTGTGAGCTTGTTTCTTGATCTGCTTCTTTACTTACCTATGCAGGAATTGGATTTACTTCAAGACGACACAAATGTATATAAACTGATTGGTCCAGTGCTCGTGAAGCAAGATTTGGCAGAAGCAAATGCGAATGTCCGCAAGAGAATTGAATACATCTCCGCAGAATTGTGTGTTTCTTCATCTGTTTTCCATATAGTTTTTTAG GCCCCCTTTGGCGTTAATTCCTACCATTTCTGTTCTCCAAAACCTTCCGCTCGCAGGTTTTCCCAGGGACACAGAGGAAGTAGACGATTCTCAGTCGGAATGAGTTCTTCAACCGCTCTTCGAGAGGTACAGCGCGAGTTGGAGGCGAAAGCCAACGATCTCAGCAAGCTACAGAAAGATATTGCGAAGAATCACCAAGTGAGGAAGAAGTACACTATTCAGCTGGGTGAGAACGAGCTCGTTCTTAAGGAATTGGATTTACTTCAAGACGACACAAATGTATATAAACTGATTGGTCCAGTGCTCGTGAAGCAAGATTTGGCAGAAGCAAATGCGAATGTCCGCAAGAGAATTGAATACATCTCCGCAGAATTGTGTGTTTCTTCATCTGTTTTCCATATAGTTTTTTAG ATGAGTTCTTCAACCGCTCTTCGAGAGGTACAGCGCGAGTTGGAGGCGAAAGCCAACGATCTCAGCAAGCTACAGAAAGATATTGCGAAGAATCACCAAGTGAGGAAGAAGTACACTATTCAGCTGGGTGAGAACGAGCTCGTTCTTAAGGAATTGGATTTACTTCAAGACGACACAAATGTATATAAACTGATTGGTCCAGTGCTCGTGAAGCAAGATTTGGCAGAAGCAAATGCGAATGTCCGCAAGAGAATTGAATACATCTCCGCAGAATTGTGTGTTTCTTCATCTGTTTTCCATATAGTTTTTTAG MSSSTALREVQRELEAKANDLSKLQKDIAKNHQVRKKYTIQLGENELVLKELDLLQDDTNVYKLIGPVLVKQDLAEANANVRKRIEYISAELCVSSSVFHIVF* Homology
BLAST of CSPI01G21400 vs. ExPASy Swiss-Prot
Match: Q17Q89 (Prefoldin subunit 6 OS=Bos taurus OX=9913 GN=PFDN6 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 4.0e-13 Identity = 39/83 (46.99%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of CSPI01G21400 vs. ExPASy Swiss-Prot
Match: Q5TJE6 (Prefoldin subunit 6 OS=Canis lupus familiaris OX=9615 GN=PFDN6 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 4.0e-13 Identity = 39/83 (46.99%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of CSPI01G21400 vs. ExPASy Swiss-Prot
Match: O15212 (Prefoldin subunit 6 OS=Homo sapiens OX=9606 GN=PFDN6 PE=1 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 4.0e-13 Identity = 39/83 (46.99%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of CSPI01G21400 vs. ExPASy Swiss-Prot
Match: Q03958 (Prefoldin subunit 6 OS=Mus musculus OX=10090 GN=Pfdn6 PE=1 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 4.0e-13 Identity = 39/83 (46.99%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of CSPI01G21400 vs. ExPASy Swiss-Prot
Match: Q9VW56 (Probable prefoldin subunit 6 OS=Drosophila melanogaster OX=7227 GN=Pfdn6 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 7.6e-12 Identity = 45/90 (50.00%), Postives = 56/90 (62.22%), Query Frame = 0
BLAST of CSPI01G21400 vs. ExPASy TrEMBL
Match: A0A1S3B9I1 (prefoldin subunit 6 OS=Cucumis melo OX=3656 GN=LOC103487480 PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 3.7e-38 Identity = 88/92 (95.65%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CSPI01G21400 vs. ExPASy TrEMBL
Match: A0A6J1CEX4 (prefoldin subunit 6-like OS=Momordica charantia OX=3673 GN=LOC111010879 PE=3 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 2.7e-36 Identity = 85/92 (92.39%), Postives = 90/92 (97.83%), Query Frame = 0
BLAST of CSPI01G21400 vs. ExPASy TrEMBL
Match: A0A200QNM8 (Prefoldin beta-like OS=Macleaya cordata OX=56857 GN=BVC80_361g6 PE=3 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 3.5e-36 Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0
BLAST of CSPI01G21400 vs. ExPASy TrEMBL
Match: A0A5B6YMY9 (Putative prefoldin subunit 6 OS=Davidia involucrata OX=16924 GN=Din_002482 PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.6e-36 Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0
BLAST of CSPI01G21400 vs. ExPASy TrEMBL
Match: A0A6J1EGS1 (prefoldin subunit 6-like OS=Cucurbita moschata OX=3662 GN=LOC111433965 PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.6e-36 Identity = 83/92 (90.22%), Postives = 91/92 (98.91%), Query Frame = 0
BLAST of CSPI01G21400 vs. NCBI nr
Match: XP_004147411.1 (prefoldin subunit 6 [Cucumis sativus]) HSP 1 Score: 171.4 bits (433), Expect = 4.1e-39 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CSPI01G21400 vs. NCBI nr
Match: KAE8653194.1 (hypothetical protein Csa_019528 [Cucumis sativus]) HSP 1 Score: 171.4 bits (433), Expect = 4.1e-39 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CSPI01G21400 vs. NCBI nr
Match: XP_008444032.1 (PREDICTED: prefoldin subunit 6 [Cucumis melo]) HSP 1 Score: 167.2 bits (422), Expect = 7.7e-38 Identity = 88/92 (95.65%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CSPI01G21400 vs. NCBI nr
Match: XP_038895368.1 (prefoldin subunit 6 [Benincasa hispida] >XP_038895369.1 prefoldin subunit 6 [Benincasa hispida]) HSP 1 Score: 162.2 bits (409), Expect = 2.5e-36 Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 0
BLAST of CSPI01G21400 vs. NCBI nr
Match: XP_022140149.1 (prefoldin subunit 6-like [Momordica charantia]) HSP 1 Score: 161.0 bits (406), Expect = 5.5e-36 Identity = 85/92 (92.39%), Postives = 90/92 (97.83%), Query Frame = 0
BLAST of CSPI01G21400 vs. TAIR 10
Match: AT1G29990.1 (prefoldin 6 ) HSP 1 Score: 148.7 bits (374), Expect = 2.6e-36 Identity = 79/92 (85.87%), Postives = 87/92 (94.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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