CSPI01G18930 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G18930
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDUF4283 domain-containing protein
LocationChr1: 14347084 .. 14347353 (+)
RNA-Seq ExpressionCSPI01G18930
SyntenyCSPI01G18930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAACTTCAAGAACAGTTGGATCTTAGCATCACATATAAGCCCTTTCATGCAGAAAAGGCAGTGGTTATGATTGAAGACAAGAGCTTGGTGAATCTCCTCTGTAAAAACAGAGGATGGACTACAGTTGGAAAGTTTTATGTCAAATTTGAGGCTTGGAACATAGCTAAACATGCTTCCCAAAACTTTTGCCAAGCTACAGTGGATGGGTCAAATTCAAAGGTATCCCCCTCCATGCATGGAATTACTCGTCTTTTTATCAGATAG

mRNA sequence

ATGGTGAAACTTCAAGAACAGTTGGATCTTAGCATCACATATAAGCCCTTTCATGCAGAAAAGGCAGTGGTTATGATTGAAGACAAGAGCTTGGTGAATCTCCTCTGTAAAAACAGAGGATGGACTACAGTTGGAAAGTTTTATGTCAAATTTGAGGCTTGGAACATAGCTAAACATGCTTCCCAAAACTTTTGCCAAGCTACAGTGGATGGGTCAAATTCAAAGGTATCCCCCTCCATGCATGGAATTACTCGTCTTTTTATCAGATAG

Coding sequence (CDS)

ATGGTGAAACTTCAAGAACAGTTGGATCTTAGCATCACATATAAGCCCTTTCATGCAGAAAAGGCAGTGGTTATGATTGAAGACAAGAGCTTGGTGAATCTCCTCTGTAAAAACAGAGGATGGACTACAGTTGGAAAGTTTTATGTCAAATTTGAGGCTTGGAACATAGCTAAACATGCTTCCCAAAACTTTTGCCAAGCTACAGTGGATGGGTCAAATTCAAAGGTATCCCCCTCCATGCATGGAATTACTCGTCTTTTTATCAGATAG

Protein sequence

MVKLQEQLDLSITYKPFHAEKAVVMIEDKSLVNLLCKNRGWTTVGKFYVKFEAWNIAKHASQNFCQATVDGSNSKVSPSMHGITRLFIR*
Homology
BLAST of CSPI01G18930 vs. ExPASy TrEMBL
Match: A0A0A0K120 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004025 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.5e-22
Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 0

Query: 1   MVKLQEQLDLSITYKPFHAEKAVVMIEDKSLVNLLCKNRGWTTVGKFYVKFEAWNIAKHA 60
           M KLQEQLDL+ITYKPFHAEK  V IEDK+LVNLLCKNRGWTTVGK+YVKFEA NIAKHA
Sbjct: 97  MAKLQEQLDLNITYKPFHAEKVAVTIEDKNLVNLLCKNRGWTTVGKYYVKFEASNIAKHA 156

Query: 61  S 62
           S
Sbjct: 157 S 157

BLAST of CSPI01G18930 vs. ExPASy TrEMBL
Match: A0A0A0KNC5 (DUF4283 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G465580 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.0e-20
Identity = 49/62 (79.03%), Postives = 58/62 (93.55%), Query Frame = 0

Query: 1   MVKLQEQLD-LSITYKPFHAEKAVVMIEDKSLVNLLCKNRGWTTVGKFYVKFEAWNIAKH 60
           M KLQEQLD L+ITYK FHAEKA+V +E+K++VNLLCKNRGWTT+GKFYVKFEAWNI+KH
Sbjct: 189 MEKLQEQLDHLNITYKLFHAEKAMVFLEEKNMVNLLCKNRGWTTIGKFYVKFEAWNISKH 248

Query: 61  AS 62
           A+
Sbjct: 249 AT 250

BLAST of CSPI01G18930 vs. ExPASy TrEMBL
Match: A0A5A7TUN4 (Mitotic spindle checkpoint protein mad1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00660 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.3e-15
Identity = 40/60 (66.67%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 1   MVKLQEQLDLSITYKPFHAEKAVVMIEDKSLVNLLCKNRGWTTVGKFYVKFEAWNIAKHA 60
           +VKL+EQLD +++Y+PFHA+KA++ I+DKSLV LLCKNRGW+TVG   VKFE WN A HA
Sbjct: 183 IVKLKEQLDTNLSYQPFHADKALIFIKDKSLVRLLCKNRGWSTVGNVDVKFEEWNHAIHA 242

BLAST of CSPI01G18930 vs. ExPASy TrEMBL
Match: E5GB30 (DUF4283 domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.3e-15
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 0

Query: 3   KLQEQLDLSITYKPFHAEKAVVMIEDKSLVNLLCKNRGWTTVGKFYVKFEAWNIAKHASQ 62
           KL EQLD +++YKPFHA KA++  +D    NL+CKN+GWTTVG+FYVKFE WN   HAS 
Sbjct: 149 KLNEQLDTTVSYKPFHANKALICFKDFEQANLICKNKGWTTVGRFYVKFEEWNQKDHASP 208

Query: 63  NF 65
            F
Sbjct: 209 KF 210

BLAST of CSPI01G18930 vs. ExPASy TrEMBL
Match: A0A5D3D384 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00200 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.9e-15
Identity = 40/60 (66.67%), Postives = 47/60 (78.33%), Query Frame = 0

Query: 1  MVKLQEQLDLSITYKPFHAEKAVVMIEDKSLVNLLCKNRGWTTVGKFYVKFEAWNIAKHA 60
          M KL+EQLD   T KPFHA+K +++ EDK+   LLCKNRGWTTVG+FYVKFE WN  KHA
Sbjct: 32 MDKLKEQLDTPFTCKPFHAKKGLMIFEDKNHAKLLCKNRGWTTVGRFYVKFEEWNQGKHA 91

BLAST of CSPI01G18930 vs. NCBI nr
Match: XP_031744399.1 (uncharacterized protein LOC116405029 [Cucumis sativus])

HSP 1 Score: 117.1 bits (292), Expect = 7.9e-23
Identity = 51/61 (83.61%), Postives = 58/61 (95.08%), Query Frame = 0

Query: 1   MVKLQEQLDLSITYKPFHAEKAVVMIEDKSLVNLLCKNRGWTTVGKFYVKFEAWNIAKHA 60
           MVK+QEQLDL+ITY+PFHAEK VV++EDK+LVNL CKNRGWTTVGKFYVKFE WN+AKHA
Sbjct: 120 MVKIQEQLDLNITYRPFHAEKTVVVLEDKNLVNLFCKNRGWTTVGKFYVKFETWNLAKHA 179

Query: 61  S 62
           S
Sbjct: 180 S 180

BLAST of CSPI01G18930 vs. NCBI nr
Match: KGN51135.1 (hypothetical protein Csa_009125 [Cucumis sativus])

HSP 1 Score: 107.1 bits (266), Expect = 8.2e-20
Identity = 49/62 (79.03%), Postives = 58/62 (93.55%), Query Frame = 0

Query: 1   MVKLQEQLD-LSITYKPFHAEKAVVMIEDKSLVNLLCKNRGWTTVGKFYVKFEAWNIAKH 60
           M KLQEQLD L+ITYK FHAEKA+V +E+K++VNLLCKNRGWTT+GKFYVKFEAWNI+KH
Sbjct: 189 MEKLQEQLDHLNITYKLFHAEKAMVFLEEKNMVNLLCKNRGWTTIGKFYVKFEAWNISKH 248

Query: 61  AS 62
           A+
Sbjct: 249 AT 250

BLAST of CSPI01G18930 vs. NCBI nr
Match: KAA0047273.1 (mitotic spindle checkpoint protein mad1 [Cucumis melo var. makuwa])

HSP 1 Score: 91.3 bits (225), Expect = 4.7e-15
Identity = 40/60 (66.67%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 1   MVKLQEQLDLSITYKPFHAEKAVVMIEDKSLVNLLCKNRGWTTVGKFYVKFEAWNIAKHA 60
           +VKL+EQLD +++Y+PFHA+KA++ I+DKSLV LLCKNRGW+TVG   VKFE WN A HA
Sbjct: 183 IVKLKEQLDTNLSYQPFHADKALIFIKDKSLVRLLCKNRGWSTVGNVDVKFEEWNHAIHA 242

BLAST of CSPI01G18930 vs. NCBI nr
Match: ADN33672.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 91.3 bits (225), Expect = 4.7e-15
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 0

Query: 3   KLQEQLDLSITYKPFHAEKAVVMIEDKSLVNLLCKNRGWTTVGKFYVKFEAWNIAKHASQ 62
           KL EQLD +++YKPFHA KA++  +D    NL+CKN+GWTTVG+FYVKFE WN   HAS 
Sbjct: 149 KLNEQLDTTVSYKPFHANKALICFKDFEQANLICKNKGWTTVGRFYVKFEEWNQKDHASP 208

Query: 63  NF 65
            F
Sbjct: 209 KF 210

BLAST of CSPI01G18930 vs. NCBI nr
Match: KAA0068029.1 (hypothetical protein E6C27_scaffold138G002250 [Cucumis melo var. makuwa] >TYK18098.1 hypothetical protein E5676_scaffold411G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 6.1e-15
Identity = 40/60 (66.67%), Postives = 47/60 (78.33%), Query Frame = 0

Query: 1  MVKLQEQLDLSITYKPFHAEKAVVMIEDKSLVNLLCKNRGWTTVGKFYVKFEAWNIAKHA 60
          M KL+EQLD   T KPFHA+K +++ EDK+   LLCKNRGWTTVG+FYVKFE WN  KHA
Sbjct: 32 MDKLKEQLDTPFTCKPFHAKKGLMIFEDKNHAKLLCKNRGWTTVGRFYVKFEEWNQGKHA 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K1205.5e-2286.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004025 PE=4 SV=1[more]
A0A0A0KNC54.0e-2079.03DUF4283 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G465580 PE=... [more]
A0A5A7TUN42.3e-1566.67Mitotic spindle checkpoint protein mad1 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
E5GB302.3e-1561.29DUF4283 domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=... [more]
A0A5D3D3842.9e-1566.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
XP_031744399.17.9e-2383.61uncharacterized protein LOC116405029 [Cucumis sativus][more]
KGN51135.18.2e-2079.03hypothetical protein Csa_009125 [Cucumis sativus][more]
KAA0047273.14.7e-1566.67mitotic spindle checkpoint protein mad1 [Cucumis melo var. makuwa][more]
ADN33672.14.7e-1561.29hypothetical protein [Cucumis melo subsp. melo][more]
KAA0068029.16.1e-1566.67hypothetical protein E6C27_scaffold138G002250 [Cucumis melo var. makuwa] >TYK180... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G18930.1CSPI01G18930.1mRNA