CSPI01G18700 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G18700
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Alba domain-containing protein
Location	Chr1: 14120894 .. 14123192 (+)
RNA-Seq Expression	CSPI01G18700
Synteny	CSPI01G18700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAGAAAGTAAATGTGTGTATATATATAATTTATGTAATATATATATTCCGCTAACAATTAAAAAGAAAAGGAAAAAAATAAGGCATCGATGCCGTCCGTACACAAATAGCCTAGCTTTACCGAAATTGAAGCCTTTTCTTCACTTTGCACTTCCCATTCTCAAAGTCGCACTTCCAGAGCGTGAGTTTTAGGGTTAGGGTTTTAGGTTTCACTAAAAGCTCAATGGAGGAGATAACCGAGGGTGTCAACTCTATCACATTGACAGCTGATTCCCAGAAGAAGAATCGAATTCAAGTCTCCAACACCAAGAAACCCTTATTCTTCTATGTTAATCTCGCCAAGGTTCCTTCCCTTTTTTCTTTCTCTCCTCTTTCAATTCACTTTCCCTCTTCTGGGTTTTTTTTTTTTTCTTTTTACTGTTGGTTCAGATTCTTAACACTTTTATCATTTTAGGGTTTTATTTGGTTTTGCTTCTCTGGTTACCGATTTTTTATTTTTATTTTTATTTCCCCCAATTTATGTAGAGGTATATGCAGCAGTACAATGAGGTCGAGCTTTCTGCGCTTGGAATGGGTAGGTTTTCTTCAATGGTTTTTGGCTTAATATGAAGGCTTTCCATCTCTGAGAAGTGCGGATTTGCTTCCTAGTGTTTGTTCTTTTTTGTTTATTATCGTTAGCCCTGCTCTGGCTGTTTAATTTGTTCTACTGGTTGACATTGGATTATAATTTATGCATTACATGACGGGGTAGACTTAAATTTTGCTTTGTTTCCGGTATTTTCTTTATTTGGGTTTTGCGTTGTCTTTATAATGAAACAGTTTGTGCCTTTCCCACTTTCTTTAATTTCTCCTCGTGTTTAGTTGTGGCTTATTAATGTATATGTGGTGCATTTATTTTCGTTTGGTTTACGAGTAATAGAATTAAATTTATTAGTTCGTTTCATCAACTTTTAGAACTAAATATTCAAATTCTTCTATGGTTTCAATGTGATATTTGACAAAAAGAATTGGCTACTCTAACTTATGAAAGCTTGTGAAGAATATTCAGTTTAAGAGCCTGGGTTAGTGAATTTTTTCATGTGACATGCTTCATAGTCTTACATATTTGTTCAAGTTTGCTGCTGAGGCATGTGAATACTCTGCATTAATGAAAGTCTTTTCTAATTTTCTCATGTGGAAACTCAAACTCATTGTTTTTTATGCAACTAATCGGACATTTTTCCTATTTTCATTTCAGTGCAGTCTATTGATCCTTTGCTATGGTGATTTGGGTTACTAACATGTTAATAATCTATGTCTACCTTTGCAGCCATTGCAACTGTTGTTACGGTTGCGGAAATTCTGAAAAACAACGGATTGGCTTTAGAAAAGAGTAAATATCGTCTTCCTTTTTCTCTAAGAAAATGTCATTGGGGCTATTTCGAACTCTCACAAAATTTCTTTATATTCTGTAGAGATTATGACTTCTACTGTTGATATCAAGGATGATTCTCGGGGGAGACCAGTTCAAAAGGCTAAGGTATACATCATCCTGCTTTCTTGCTTTGTTGGAAAATTTTCGCTCATGTATTTAGGCATATAAAAGTACAATTTCGTGATTTCCATCCCAATGTATCAGATCATTGACACTCATATTTGGACCCTAGAAATTGAATAGCCGTTTATTCACTGAGCATGCAAATGAATGATTGAAAGTGTGCAAAATTGCTTGTGTTTTCATTTGACTAGACAAGTCTAACATTTTTCATGACTGATTTCCACCTTCCAGATTGAGATTGTGCTGGGAAAAACTGAAAACTTTGATGAACTGATGGCTGCTGCTGCAGAGGAAAGGGAAAACGAAGATGGTGAAGAGCAGAGTTGAAAAGCTTTTTTTTTTTCTCTTTTCTTTTCTGTTCTTATCCTGCTTGTGGATGAGGCTAGTTCTTTCCTTTATATCTGATATCTCTGTTCTTAATTACGTTAGTAAACAAGTGGTTCATTTACTGATGTAGGCTTTTTAGTTGTGGGGAACCGTTGACTTTTTTACCATGGGACATCTTTATTTAAGAGAGTGGAAACATAATCTGAGTTACCCTTCAAAATTAAGTTGATAGTCTTTATTTTCATGCTTCAATCTTTGGTAAATATGCATTTGTGATGGGTCATCTGCTTCTGCTATTAAAACTACATAGAAGTATGGTCTCTTTAAACGTATTATCATTGAGCTTAGTTCCCCAAAACCTGTTAACCACTTAGGACCAACCGCATATGTTCATATCATGAGTCTTATTTAGACATGTAAGATCTAAAGAGAGT

mRNA sequence

CCCAGAAAGTAAATGTGTGTATATATATAATTTATGTAATATATATATTCCGCTAACAATTAAAAAGAAAAGGAAAAAAATAAGGCATCGATGCCGTCCGTACACAAATAGCCTAGCTTTACCGAAATTGAAGCCTTTTCTTCACTTTGCACTTCCCATTCTCAAAGTCGCACTTCCAGAGCGTGAGTTTTAGGGTTAGGGTTTTAGGTTTCACTAAAAGCTCAATGGAGGAGATAACCGAGGGTGTCAACTCTATCACATTGACAGCTGATTCCCAGAAGAAGAATCGAATTCAAGTCTCCAACACCAAGAAACCCTTATTCTTCTATGTTAATCTCGCCAAGAGGTATATGCAGCAGTACAATGAGGTCGAGCTTTCTGCGCTTGGAATGGCCATTGCAACTGTTGTTACGGTTGCGGAAATTCTGAAAAACAACGGATTGGCTTTAGAAAAGAAGATTATGACTTCTACTGTTGATATCAAGGATGATTCTCGGGGGAGACCAGTTCAAAAGGCTAAGATTGAGATTGTGCTGGGAAAAACTGAAAACTTTGATGAACTGATGGCTGCTGCTGCAGAGGAAAGGGAAAACGAAGATGGTGAAGAGCAGAGTTGAAAAGCTTTTTTTTTTTCTCTTTTCTTTTCTGTTCTTATCCTGCTTGTGGATGAGGCTAGTTCTTTCCTTTATATCTGATATCTCTGTTCTTAATTACGTTAGTAAACAAGTGGTTCATTTACTGATGTAGGCTTTTTAGTTGTGGGGAACCGTTGACTTTTTTACCATGGGACATCTTTATTTAAGAGAGTGGAAACATAATCTGAGTTACCCTTCAAAATTAAGTTGATAGTCTTTATTTTCATGCTTCAATCTTTGGTAAATATGCATTTGTGATGGGTCATCTGCTTCTGCTATTAAAACTACATAGAAGTATGGTCTCTTTAAACGTATTATCATTGAGCTTAGTTCCCCAAAACCTGTTAACCACTTAGGACCAACCGCATATGTTCATATCATGAGTCTTATTTAGACATGTAAGATCTAAAGAGAGT

Coding sequence (CDS)

ATGGAGGAGATAACCGAGGGTGTCAACTCTATCACATTGACAGCTGATTCCCAGAAGAAGAATCGAATTCAAGTCTCCAACACCAAGAAACCCTTATTCTTCTATGTTAATCTCGCCAAGAGGTATATGCAGCAGTACAATGAGGTCGAGCTTTCTGCGCTTGGAATGGCCATTGCAACTGTTGTTACGGTTGCGGAAATTCTGAAAAACAACGGATTGGCTTTAGAAAAGAAGATTATGACTTCTACTGTTGATATCAAGGATGATTCTCGGGGGAGACCAGTTCAAAAGGCTAAGATTGAGATTGTGCTGGGAAAAACTGAAAACTTTGATGAACTGATGGCTGCTGCTGCAGAGGAAAGGGAAAACGAAGATGGTGAAGAGCAGAGTTGA

Protein sequence

MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEERENEDGEEQS*

Homology

[Close]

BLAST of CSPI01G18700 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.0e-50
Identity = 106/130 (81.54%), Postives = 118/130 (90.77%), Query Frame = 0


Query: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEIT+GVN++ L  DSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYN+VELSALGMAIAT
Sbjct: 1   MEEITDGVNNMNLATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTV EILKNNG A+EKKIMTSTVDIKDD+RGRPVQKAKIEI L K+E FDELMAAA EE
Sbjct: 61  VVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEE 120

Query: 121 RENEDGEEQS 131
           +E+ + + Q+
Sbjct: 121 KEDAEAQVQN 130

[Close]

BLAST of CSPI01G18700 vs. ExPASy TrEMBL
Match: A0A5A7TV88 (Alba domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00010 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.0e-60
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENEDGEEQS 131
           RENEDGEEQS
Sbjct: 121 RENEDGEEQS 130

[Close]

BLAST of CSPI01G18700 vs. ExPASy TrEMBL
Match: A0A0A0LZB6 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G320340 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.0e-60
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENEDGEEQS 131
           RENEDGEEQS
Sbjct: 121 RENEDGEEQS 130

[Close]

BLAST of CSPI01G18700 vs. ExPASy TrEMBL
Match: A0A6J1CUJ0 (uncharacterized protein At2g34160-like OS=Momordica charantia OX=3673 GN=LOC111014408 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.0e-60
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENEDGEEQS 131
           RENEDGEEQS
Sbjct: 121 RENEDGEEQS 130

[Close]

BLAST of CSPI01G18700 vs. ExPASy TrEMBL
Match: A0A1S3B8Y2 (uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103487464 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.0e-60
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENEDGEEQS 131
           RENEDGEEQS
Sbjct: 121 RENEDGEEQS 130

[Close]

BLAST of CSPI01G18700 vs. ExPASy TrEMBL
Match: A0A6J1HAY2 (uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC111461689 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.5e-60
Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENEDGEEQS 131
           RENEDGEEQS
Sbjct: 121 RENEDGEEQS 130

[Close]

BLAST of CSPI01G18700 vs. NCBI nr
Match: XP_004150019.1 (uncharacterized protein At2g34160 [Cucumis sativus] >XP_008444017.1 PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo] >XP_022144816.1 uncharacterized protein At2g34160-like [Momordica charantia] >XP_038878653.1 uncharacterized protein At2g34160-like [Benincasa hispida] >KAA0046788.1 Alba domain-containing protein [Cucumis melo var. makuwa] >KGN65316.1 hypothetical protein Csa_020079 [Cucumis sativus] >TYK29659.1 Alba domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 241.5 bits (615), Expect = 4.1e-60
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENEDGEEQS 131
           RENEDGEEQS
Sbjct: 121 RENEDGEEQS 130

[Close]

BLAST of CSPI01G18700 vs. NCBI nr
Match: XP_022961070.1 (uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023516863.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo] >XP_023516864.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo] >XP_023516865.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo] >KAG6589857.1 hypothetical protein SDJN03_15280, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023529.1 hypothetical protein SDJN02_14555 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 239.6 bits (610), Expect = 1.5e-59
Identity = 129/130 (99.23%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENEDGEEQS 131
           RENEDGEEQS
Sbjct: 121 RENEDGEEQS 130

[Close]

BLAST of CSPI01G18700 vs. NCBI nr
Match: XP_022987902.1 (uncharacterized protein At2g34160-like [Cucurbita maxima] >XP_022987903.1 uncharacterized protein At2g34160-like [Cucurbita maxima])

HSP 1 Score: 237.7 bits (605), Expect = 5.9e-59
Identity = 128/130 (98.46%), Postives = 128/130 (98.46%), Query Frame = 0


Query: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAA EE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAEEE 120

Query: 121 RENEDGEEQS 131
           RENEDGEEQS
Sbjct: 121 RENEDGEEQS 130

[Close]

BLAST of CSPI01G18700 vs. NCBI nr
Match: XP_022972044.1 (uncharacterized protein At2g34160-like [Cucurbita maxima])

HSP 1 Score: 236.9 bits (603), Expect = 1.0e-58
Identity = 128/130 (98.46%), Postives = 128/130 (98.46%), Query Frame = 0


Query: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 4   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 63

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 64  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 123

Query: 121 RENEDGEEQS 131
           REN DGEEQS
Sbjct: 124 RENGDGEEQS 133

[Close]

BLAST of CSPI01G18700 vs. NCBI nr
Match: XP_022924689.1 (uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023529342.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo] >KAG7021810.1 hypothetical protein SDJN02_15538 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236.9 bits (603), Expect = 1.0e-58
Identity = 128/130 (98.46%), Postives = 128/130 (98.46%), Query Frame = 0


Query: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVNSI LTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT
Sbjct: 1   MEEITEGVNSIALTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE
Sbjct: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120

Query: 121 RENEDGEEQS 131
           REN DGEEQS
Sbjct: 121 RENGDGEEQS 130

[Close]

BLAST of CSPI01G18700 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 203.8 bits (517), Expect = 8.7e-53
Identity = 108/130 (83.08%), Postives = 118/130 (90.77%), Query Frame = 0


Query: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEITEGVN++ L  D+QKKNRIQVSNTKKPLFFYVNLAKRYMQQY +VELSALGMAIAT
Sbjct: 1   MEEITEGVNNMNLAVDTQKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTVAEILKNNG A+EKKIMTSTVDIKDDSRGRPVQKAKIEI L K+E FDELMAAA EE
Sbjct: 61  VVTVAEILKNNGFAVEKKIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELMAAANEE 120

Query: 121 RENEDGEEQS 131
           +E  + +EQ+
Sbjct: 121 KEAAEAQEQN 130

[Close]

BLAST of CSPI01G18700 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 200.7 bits (509), Expect = 7.4e-52
Identity = 106/130 (81.54%), Postives = 118/130 (90.77%), Query Frame = 0


Query: 1   MEEITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIAT 60
           MEEIT+GVN++ L  DSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYN+VELSALGMAIAT
Sbjct: 1   MEEITDGVNNMNLATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIAT 60

Query: 61  VVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEE 120
           VVTV EILKNNG A+EKKIMTSTVDIKDD+RGRPVQKAKIEI L K+E FDELMAAA EE
Sbjct: 61  VVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEE 120

Query: 121 RENEDGEEQS 131
           +E+ + + Q+
Sbjct: 121 KEDAEAQVQN 130

[Close]

BLAST of CSPI01G18700 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 154.8 bits (390), Expect = 4.7e-38
Identity = 79/122 (64.75%), Postives = 99/122 (81.15%), Query Frame = 0


Query: 4   ITEGVNSITLTADSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVT 63
           +     + T T ++ KKNRIQVSNTKKPLFFYVNLAKRY+QQ+NEVELSALGMAI TVVT
Sbjct: 21  LAPATTTTTATVETHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVT 80

Query: 64  VAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELMAAAAEEREN 123
           ++EILKNNGLA EKK++TSTV +KD+++G+ VQKAKIEIVLGK++ FD L+      +  
Sbjct: 81  ISEILKNNGLATEKKVLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSLVPPVTNGKTP 140

Query: 124 ED 126
           E+
Sbjct: 141 EE 142

The following BLAST results are available for this feature:

BLAST of CSPI01G18700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22969	1.0e-50	81.54	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 P...	[more]

BLAST of CSPI01G18700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TV88	2.0e-60	100.00	Alba domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0LZB6	2.0e-60	100.00	Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G320340 PE=4 S...	[more]
A0A6J1CUJ0	2.0e-60	100.00	uncharacterized protein At2g34160-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A1S3B8Y2	2.0e-60	100.00	uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103487464 P...	[more]
A0A6J1HAY2	7.5e-60	99.23	uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]

BLAST of CSPI01G18700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150019.1	4.1e-60	100.00	uncharacterized protein At2g34160 [Cucumis sativus] >XP_008444017.1 PREDICTED: u...	[more]
XP_022961070.1	1.5e-59	99.23	uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023516863.1 unch...	[more]
XP_022987902.1	5.9e-59	98.46	uncharacterized protein At2g34160-like [Cucurbita maxima] >XP_022987903.1 unchar...	[more]
XP_022972044.1	1.0e-58	98.46	uncharacterized protein At2g34160-like [Cucurbita maxima]	[more]
XP_022924689.1	1.0e-58	98.46	uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023529342.1 unch...	[more]

BLAST of CSPI01G18700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29250.1	8.7e-53	83.08	Alba DNA/RNA-binding protein	[more]
AT2G34160.1	7.4e-52	81.54	Alba DNA/RNA-binding protein	[more]
AT3G04620.1	4.7e-38	64.75	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 21..74 e-value: 1.1E-12 score: 47.6
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 19..130 e-value: 4.0E-57 score: 193.1
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 20..115
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PIRSF	PIRSF030333	UCP030333_Alba	coord: 1..130 e-value: 3.2E-64 score: 213.4
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PANTHER	PTHR31947	DNA/RNA-BINDING PROTEIN ALBA 3	coord: 1..130
None	No IPR available	PANTHER	PTHR31947:SF32	SUBFAMILY NOT NAMED	coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G18700.1	CSPI01G18700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding