CSPI01G16040 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G16040
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr1: 11517836 .. 11518217 (+)
RNA-Seq Expression	CSPI01G16040
Synteny	CSPI01G16040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAATATAATTTAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAATCTTATGCAAAATAGGACACCTCAATTGAGTGCCACAAGTGCAAGGACATCAGTCTTTGTCCAGTTGTAAATGTTTTGCCTTTATCAATTATTAATGGGTTAAAAAC

mRNA sequence

ATGGAAAAATATAATTTAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAATCTTATGCAAAATAGGACACCTCAATTGAGTGCCACAAGTGCAAGGACATCAGTCTTTGTCCAGTTGTAAATGTTTTGCCTTTATCAATTATTAATGGGTTAAAAAC

Coding sequence (CDS)

ATGGAAAAATATAATTTAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAATCTTATGCAAAATAGGACACCTCAATTGAGTGCCACAAGTGCAAGGACATCAGTCTTTGTCCAGTTGTAA

Protein sequence

MEKYNLKEEEEEEEEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEENLMQNRTPQLSATSARTSVFVQL*

Homology

The following BLAST results are available for this feature:

BLAST of CSPI01G16040 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI01G16040 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI01G16040 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI01G16040 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G16040.1	CSPI01G16040.1	mRNA