CSPI01G15340 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G15340
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 10938692 .. 10939114 (+)
RNA-Seq ExpressionCSPI01G15340
SyntenyCSPI01G15340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAACTGCATTGTCCTGCCTTCTGTTCGGTCCCCGCAGAAAAAGCTTAGAGGGCTTAAAAAAGCCACGGAGTTAGCTACAACTATTGTCTGTTCTGCTACCGAATGTGGTAACGACCCTCTTCTGAAGGACTTTAAATCTTCAACCAAAACTAGCCTCCAAGTTTGTGAGGTTCGAAATGTTGTTCCATGCTTGAAAGAGCTCGAGAATCTTCTAGCTTCCTTGAAGATAGTCTACTCGGACGAAGGAGGAGCAAAGAAAGTGAAGATTGTGGTTACTAAGGAACAGTTTAAGTTGCTGTTGTCGAATGCAAAGAAGTTGCAATATCGACATAGATTGTTGAGCTACACAGGCCCCCGTAAAGGGTGTAAAAATTGGCGGCCAACGTTGTCTGCAATCTCGGAGGAAGAAGATTTTTGA

mRNA sequence

ATGGGAAACTGCATTGTCCTGCCTTCTGTTCGGTCCCCGCAGAAAAAGCTTAGAGGGCTTAAAAAAGCCACGGAGTTAGCTACAACTATTGTCTGTTCTGCTACCGAATGTGGTAACGACCCTCTTCTGAAGGACTTTAAATCTTCAACCAAAACTAGCCTCCAAGTTTGTGAGGTTCGAAATGTTGTTCCATGCTTGAAAGAGCTCGAGAATCTTCTAGCTTCCTTGAAGATAGTCTACTCGGACGAAGGAGGAGCAAAGAAAGTGAAGATTGTGGTTACTAAGGAACAGTTTAAGTTGCTGTTGTCGAATGCAAAGAAGTTGCAATATCGACATAGATTGTTGAGCTACACAGGCCCCCGTAAAGGGTGTAAAAATTGGCGGCCAACGTTGTCTGCAATCTCGGAGGAAGAAGATTTTTGA

Coding sequence (CDS)

ATGGGAAACTGCATTGTCCTGCCTTCTGTTCGGTCCCCGCAGAAAAAGCTTAGAGGGCTTAAAAAAGCCACGGAGTTAGCTACAACTATTGTCTGTTCTGCTACCGAATGTGGTAACGACCCTCTTCTGAAGGACTTTAAATCTTCAACCAAAACTAGCCTCCAAGTTTGTGAGGTTCGAAATGTTGTTCCATGCTTGAAAGAGCTCGAGAATCTTCTAGCTTCCTTGAAGATAGTCTACTCGGACGAAGGAGGAGCAAAGAAAGTGAAGATTGTGGTTACTAAGGAACAGTTTAAGTTGCTGTTGTCGAATGCAAAGAAGTTGCAATATCGACATAGATTGTTGAGCTACACAGGCCCCCGTAAAGGGTGTAAAAATTGGCGGCCAACGTTGTCTGCAATCTCGGAGGAAGAAGATTTTTGA

Protein sequence

MGNCIVLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVRNVVPCLKELENLLASLKIVYSDEGGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGPRKGCKNWRPTLSAISEEEDF*
Homology
BLAST of CSPI01G15340 vs. ExPASy TrEMBL
Match: A0A0A0LSY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173150 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.6e-71
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 1   MGNCIVLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVR 60
           MGNCIVLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVR
Sbjct: 1   MGNCIVLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVR 60

Query: 61  NVVPCLKELENLLASLKIVYSDEGGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGP 120
           NVVPCLKELENLLASLKIVYSDE GAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGP
Sbjct: 61  NVVPCLKELENLLASLKIVYSDEAGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGP 120

Query: 121 RKGCKNWRPTLSAISEEEDF 141
           RKGCKNWRPTLSAISEEEDF
Sbjct: 121 RKGCKNWRPTLSAISEEEDF 140

BLAST of CSPI01G15340 vs. ExPASy TrEMBL
Match: A0A5D3CW41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00390 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 5.4e-48
Identity = 106/121 (87.60%), Postives = 111/121 (91.74%), Query Frame = 0

Query: 1   MGNCIVLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVR 60
           MGNCIVLPSVRSPQKKL+GLKKAT LAT IV SA+ECGNDPLLK   SSTKTSLQV EVR
Sbjct: 1   MGNCIVLPSVRSPQKKLQGLKKATGLATPIVYSASECGNDPLLKYCNSSTKTSLQVGEVR 60

Query: 61  NVVPCLKELENLLASLKIVYSDEGGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGP 120
           NVVPCLKELENLLAS KIVYSD GGAKKVKIVVT+EQFKLLL+NAKKLQ R+RLLSYTGP
Sbjct: 61  NVVPCLKELENLLASSKIVYSDGGGAKKVKIVVTREQFKLLLANAKKLQSRYRLLSYTGP 120

Query: 121 R 122
           R
Sbjct: 121 R 121

BLAST of CSPI01G15340 vs. ExPASy TrEMBL
Match: A0A6J5UND5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24534 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04
Identity = 35/92 (38.04%), Postives = 50/92 (54.35%), Query Frame = 0

Query: 52  TSLQVCEVRNVVPCLKELENLLASLKIVYSDEGGAKKVKIVVTKEQFKLLLSNAKKLQYR 111
           T L+  EV ++VP L  L   L   KIV+ +    +K+KIVVT+EQ +LLL +A K +  
Sbjct: 73  TKLEPGEVYHIVPNLASLGKPLVPSKIVHQESCKRQKIKIVVTREQLELLLKSANKFRSP 132

Query: 112 HRL---LSYTGPRKGCKNWRPTLSAISEEEDF 141
             +   LS     +G   WRP+L+ I E   F
Sbjct: 133 KEIGVQLSGRSGLEGSPKWRPSLAIIPEVHSF 164

BLAST of CSPI01G15340 vs. ExPASy TrEMBL
Match: A0A5E4GL56 (PREDICTED: POPTR_0006s01910g OS=Prunus dulcis OX=3755 GN=ALMOND_2B008489 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.1e-04
Identity = 35/92 (38.04%), Postives = 50/92 (54.35%), Query Frame = 0

Query: 52  TSLQVCEVRNVVPCLKELENLLASLKIVYSDEGGAKKVKIVVTKEQFKLLLSNAKKLQYR 111
           T L+  EV ++VP L  L   L   KIV+ +    +K+KIVVT+EQ +LLL +A K +  
Sbjct: 61  TKLEQGEVYHLVPNLASLGKPLVPSKIVHQESCKRQKIKIVVTREQLELLLKSANKFRSP 120

Query: 112 HRL---LSYTGPRKGCKNWRPTLSAISEEEDF 141
             +   LS     +G   WRP+L+ I E   F
Sbjct: 121 KEIGVQLSGRSGLEGSPKWRPSLAIIPEVHSF 152

BLAST of CSPI01G15340 vs. ExPASy TrEMBL
Match: A0A251PDS0 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G005300 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.1e-04
Identity = 35/92 (38.04%), Postives = 50/92 (54.35%), Query Frame = 0

Query: 52  TSLQVCEVRNVVPCLKELENLLASLKIVYSDEGGAKKVKIVVTKEQFKLLLSNAKKLQYR 111
           T L+  EV ++VP L  L   L   KIV+ +    +K+KIVVT+EQ +LLL +A K +  
Sbjct: 61  TKLEQGEVYHLVPNLASLGKPLVPSKIVHQESCKRQKIKIVVTREQLELLLKSANKFRSP 120

Query: 112 HRL---LSYTGPRKGCKNWRPTLSAISEEEDF 141
             +   LS     +G   WRP+L+ I E   F
Sbjct: 121 KEIGVQLSGRSGLEGSPKWRPSLAIIPEVHSF 152

BLAST of CSPI01G15340 vs. NCBI nr
Match: KGN64995.1 (hypothetical protein Csa_022837 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 3.2e-71
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 1   MGNCIVLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVR 60
           MGNCIVLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVR
Sbjct: 1   MGNCIVLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVR 60

Query: 61  NVVPCLKELENLLASLKIVYSDEGGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGP 120
           NVVPCLKELENLLASLKIVYSDE GAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGP
Sbjct: 61  NVVPCLKELENLLASLKIVYSDEAGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGP 120

Query: 121 RKGCKNWRPTLSAISEEEDF 141
           RKGCKNWRPTLSAISEEEDF
Sbjct: 121 RKGCKNWRPTLSAISEEEDF 140

BLAST of CSPI01G15340 vs. NCBI nr
Match: KAA0042344.1 (hypothetical protein E6C27_scaffold795G00420 [Cucumis melo var. makuwa] >TYK15468.1 hypothetical protein E5676_scaffold477G00390 [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 1.1e-47
Identity = 106/121 (87.60%), Postives = 111/121 (91.74%), Query Frame = 0

Query: 1   MGNCIVLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVR 60
           MGNCIVLPSVRSPQKKL+GLKKAT LAT IV SA+ECGNDPLLK   SSTKTSLQV EVR
Sbjct: 1   MGNCIVLPSVRSPQKKLQGLKKATGLATPIVYSASECGNDPLLKYCNSSTKTSLQVGEVR 60

Query: 61  NVVPCLKELENLLASLKIVYSDEGGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGP 120
           NVVPCLKELENLLAS KIVYSD GGAKKVKIVVT+EQFKLLL+NAKKLQ R+RLLSYTGP
Sbjct: 61  NVVPCLKELENLLASSKIVYSDGGGAKKVKIVVTREQFKLLLANAKKLQSRYRLLSYTGP 120

Query: 121 R 122
           R
Sbjct: 121 R 121

BLAST of CSPI01G15340 vs. NCBI nr
Match: XP_038877793.1 (uncharacterized protein LOC120070018 isoform X1 [Benincasa hispida])

HSP 1 Score: 194.5 bits (493), Expect = 6.1e-46
Identity = 102/135 (75.56%), Postives = 111/135 (82.22%), Query Frame = 0

Query: 6   VLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVRNVVPC 65
           VL   + PQKKLR L+KAT+       SATECG DPLL DF S T+T LQV EV+N+VPC
Sbjct: 10  VLMPYQLPQKKLRELEKATD-------SATECGKDPLLLDFTSPTRTILQVGEVQNIVPC 69

Query: 66  LKELENLLASLKIVYSDEGGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGPRKGCK 125
           LKELENLLAS KI YSD  GA+KVKIVVTKEQFKLLL+NAKKLQ RHRLLSYTGPRKGC+
Sbjct: 70  LKELENLLASSKIAYSDGAGARKVKIVVTKEQFKLLLANAKKLQSRHRLLSYTGPRKGCR 129

Query: 126 NWRPTLSAISEEEDF 141
            WRPTLSAISEEEDF
Sbjct: 130 KWRPTLSAISEEEDF 137

BLAST of CSPI01G15340 vs. NCBI nr
Match: KAG6583721.1 (hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 170.2 bits (430), Expect = 1.2e-38
Identity = 92/113 (81.42%), Postives = 99/113 (87.61%), Query Frame = 0

Query: 1   MGNCIVLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVR 60
           MGNCIVLP VRSPQKKLRG++KAT+LATT V SATEC ND LL DF SST+TSLQV EVR
Sbjct: 1   MGNCIVLPCVRSPQKKLRGIEKATDLATT-VDSATECCNDHLLHDFSSSTRTSLQVGEVR 60

Query: 61  NVVPCLKELENLLASLKIVYSDEGGAKKVKIVVTKEQFKLLLSNAKKLQYRHR 114
           +VVPCLKELE LL S KIVYSD  GA+KVKIVVTKEQFKLLL+NAKKLQ RHR
Sbjct: 61  DVVPCLKELEKLLVSSKIVYSDGAGARKVKIVVTKEQFKLLLANAKKLQSRHR 112

BLAST of CSPI01G15340 vs. NCBI nr
Match: XP_023542404.1 (uncharacterized protein LOC111802317 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 82/139 (58.99%), Postives = 95/139 (68.35%), Query Frame = 0

Query: 1   MGNCIVLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVR 60
           MGNCI+LP V SP K L     + ELA T+V SATE GNDPLL                 
Sbjct: 136 MGNCIILPCVHSPSKNL-----SPELA-TVVDSATEQGNDPLL----------------- 195

Query: 61  NVVPCLKELENLLASLKIVYSDEGGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGP 120
           +VVPCLKELENLL  LK  YS  GGA++VKIVVT+EQFKLLL+NAKK+Q  +RLLSY GP
Sbjct: 196 DVVPCLKELENLLVYLKTAYSSGGGAREVKIVVTREQFKLLLANAKKMQSAYRLLSYRGP 251

Query: 121 RKGCKNWRPTLSAISEEED 140
            +G + WRP LS ISEEE+
Sbjct: 256 GRGRRKWRPMLSVISEEEE 251

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LSY91.6e-7199.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173150 PE=4 SV=1[more]
A0A5D3CW415.4e-4887.60Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J5UND51.3e-0438.04Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24534 PE=4 S... [more]
A0A5E4GL562.1e-0438.04PREDICTED: POPTR_0006s01910g OS=Prunus dulcis OX=3755 GN=ALMOND_2B008489 PE=4 SV... [more]
A0A251PDS02.1e-0438.04Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G005300 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN64995.13.2e-7199.29hypothetical protein Csa_022837 [Cucumis sativus][more]
KAA0042344.11.1e-4787.60hypothetical protein E6C27_scaffold795G00420 [Cucumis melo var. makuwa] >TYK1546... [more]
XP_038877793.16.1e-4675.56uncharacterized protein LOC120070018 isoform X1 [Benincasa hispida][more]
KAG6583721.11.2e-3881.42hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023542404.11.2e-3058.99uncharacterized protein LOC111802317 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G15340.1CSPI01G15340.1mRNA