CSPI01G14710 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G14710
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ferredoxin
Location	Chr1: 10394255 .. 10396100 (+)
RNA-Seq Expression	CSPI01G14710
Synteny	CSPI01G14710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCGCATCCTTCAACCACTTACGTCTCCCTTTTGATTTCCTGTCCTTGCTTTCTCCGCTGCCTCTCTCTTTCTGTAAGCTTCTCTTCCCCCATTTCCTTCCTTCGTTTATATGTTCTTTCTATCTTTTGCTATGAAAATCAACTAATTTGCTTCTCAACATATTTGTTCTCTAACCATCTCCCTCATCAAAATGCCCTTTTCCTTTTACCATTTCGCTATTTACTGTATTTCCTCATTTCCCATATTCTCTTCTCTTTTTACATCACTGCCTTTATTTTTGTTGCTTTCGATCGTTTTAGTTCGATAGTATCAATCTGTGCTAACTTCTGTTTCTTCAAATAAAACCTTTGGATTCTGTTGACATTTTGTTCTTAACTAATGCAACTGATCTGGGTTGGAATTGAATGGTTTTGTTCATTACTTATGGAGCTTCGAGTGAAGAGCAGATAAAGCCCTTAGGTTGCATCTTCTCATAATGCTCCATACACCAATTTGCCTCCATTAACATTGAATAGCTTTCTGCTGTGCTACCTCATTTGTTCTTTCAAGAGGCATACAAAATCACTAAACCTATCATTTATTGCATTCGTTTCTCTATGCTCTGAATTGAAACACTCGATGCTTAGTTTTCACACACACGCAAATACTCCATTGCTGTTAAATGATACAACAGTTAATTTACTCTTAAGCTTAAGCATTTGAGTCAATAGGTGTTTTATAACGTTGCTGGAGCAGAGAGCAGATCCTATTTCAAACTCGTCCATTGTTATTTCCTTCTCAATTTACATCGATGTCGATTTCTATTTGTTGGTTCTTCTAAAATTAGAAGATATAATATTAAGTTTACCTTCCCTCCATTAGTTTAAGCTTTTGGGTCAATTGGTGTTTTAAGAATTAGAAAGGTAAATGAAGAAATCAAGTATTTTCTGCTGAATTGTGAGATAAAATGAAAAAGAAAATGGTTCTGCATTTTTCATACCTCTGCCATATGGAGGTTCATTGTTAGAGTATGATCATCATCCATTCTGGTGCTTGTTGGATGTGCTCTATATTCTAAATCTTCTGTTTGATCTTTTGTTACTTGCTTGTTCCCCGGTGTAGCCTTTATTTTTCTCACATGCTTTTAGGTTTTGATTGATTTGATTTGTAAACCACACCAGTTTAAATGTGTTTCATGAATTTAGGAGCAGAAATGTCAACCATGTCGACTGCAAAGCTCCCTACCCACTTCATGTACAACACACAATCTAAAAATCAACTCGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTTGAAATCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCTGTGCAATGGCAGCTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTATATTCTTGATGCAGCTGAAGAAGCGGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTTGATCAATCAGACGGGTCGTTCCTTGACGATGATCAAATGGCAAATGGTTACTTGTTAACCTGTATTTCACTCCCAACTGCAGATTGTGTGATTCACACACACAAAGAAGGAGAACTGATCTGAGTATGATAGTTTGAATGATACAGAGTGTTTTCTTGTCTCATGGTTTTCATTTGTAATGTCATATTATTAAAAAATGAAAAAAATGAAAAAATAAATCAAATGTGTGAACTTTCTCGTCATGCACTTTCCTTGTTATTATTATCTACTTACATTGCATGAGAAATTTTGTACAATTATTTCTTTGGAC

mRNA sequence

ATTCGCATCCTTCAACCACTTACGTCTCCCTTTTGATTTCCTGTCCTTGCTTTCTCCGCTGCCTCTCTCTTTCTGAGCAGAAATGTCAACCATGTCGACTGCAAAGCTCCCTACCCACTTCATGTACAACACACAATCTAAAAATCAACTCGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTTGAAATCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCTGTGCAATGGCAGCTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTATATTCTTGATGCAGCTGAAGAAGCGGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTTGATCAATCAGACGGGTCGTTCCTTGACGATGATCAAATGGCAAATGGTTACTTGTTAACCTGTATTTCACTCCCAACTGCAGATTGTGTGATTCACACACACAAAGAAGGAGAACTGATCTGAGTATGATAGTTTGAATGATACAGAGTGTTTTCTTGTCTCATGGTTTTCATTTGTAATGTCATATTATTAAAAAATGAAAAAAATGAAAAAATAAATCAAATGTGTGAACTTTCTCGTCATGCACTTTCCTTGTTATTATTATCTACTTACATTGCATGAGAAATTTTGTACAATTATTTCTTTGGAC

Coding sequence (CDS)

ATGTCAACCATGTCGACTGCAAAGCTCCCTACCCACTTCATGTACAACACACAATCTAAAAATCAACTCGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTTGAAATCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCTGTGCAATGGCAGCTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTATATTCTTGATGCAGCTGAAGAAGCGGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTTGATCAATCAGACGGGTCGTTCCTTGACGATGATCAAATGGCAAATGGTTACTTGTTAACCTGTATTTCACTCCCAACTGCAGATTGTGTGATTCACACACACAAAGAAGGAGAACTGATCTGA

Protein sequence

MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI*

Homology

[Close]

BLAST of CSPI01G14710 vs. ExPASy Swiss-Prot
Match: P27788 (Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.2e-43
Identity = 83/132 (62.88%), Postives = 97/132 (73.48%), Query Frame = 0


Query: 22  QLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKLVEPCGKEHEFEASDDTY 81
           Q   T +K PSS+     + K   L +       AMA +K+KLV P G+EHEF+A DD Y
Sbjct: 20  QASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAY 79

Query: 82  ILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTCISLPTA 141
           ILDAAE AG++LPYSCRAGACSTCAGKI SGSVDQSDGSFLDD Q   GY+LTC+S P +
Sbjct: 80  ILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKS 139

Query: 142 DCVIHTHKEGEL 154
           DCVIHTHKEG+L
Sbjct: 140 DCVIHTHKEGDL 151

[Close]

BLAST of CSPI01G14710 vs. ExPASy Swiss-Prot
Match: Q9ZQG8 (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-41
Identity = 86/154 (55.84%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPS---SIGSTRNILKSFGLN-SRPSFRACAMAA 63
           M+T ++ +  M     ++Q  + +I   S   S+GST+ + +SFGL  S  S  A   A 
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 123
           +K+KL+ P G+E EFE  DD YILDAAEEAG+DLPYSCRAGACSTCAG+IVSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFL+D  +  GY+LTC++ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of CSPI01G14710 vs. ExPASy Swiss-Prot
Match: P94044 (Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 9.2e-38
Identity = 83/154 (53.90%), Postives = 100/154 (64.94%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MST +  +LP      +       +      S  G  R   ++ G      F A A A  
Sbjct: 1   MSTATAPRLPAPRSGASYHYQTTAAPAANTLSFAGHARQAARASGPRLSSRFVASAAAVL 60

Query: 61  -KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 120
            K+KLV P G EHEFEA DDTYIL+AAE AG++LP+SCRAG+CSTCAG++ +G VDQS+G
Sbjct: 61  HKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEG 120

Query: 121 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFLDD QMA GYLLTCIS P ADCVIHTHKE +L
Sbjct: 121 SFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDL 154

[Close]

BLAST of CSPI01G14710 vs. ExPASy Swiss-Prot
Match: P14937 (Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.6e-36
Identity = 66/96 (68.75%), Postives = 81/96 (84.38%), Query Frame = 0


Query: 58  AAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQS 117
           A +K+KL+ P G+E+EFE  DD +ILDAAEEAG+DLPYSCRAGACSTCAG+IV G VDQS
Sbjct: 2   AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQS 61

Query: 118 DGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           +GSFL+DD    G++LTC++ P +DCVIHTHKE EL
Sbjct: 62  EGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETEL 97

[Close]

BLAST of CSPI01G14710 vs. ExPASy Swiss-Prot
Match: P00243 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) OX=1147 PE=1 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 2.5e-35
Identity = 69/97 (71.13%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 57  MAAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQ 116
           MA++ +KL+ P G E+  E SDDTYILDAAEEAG+DLPYSCRAGACSTCAGKI +GSVDQ
Sbjct: 1   MASYTVKLITPDG-ENSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQ 60

Query: 117 SDGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SD SFLDDDQ+  GY+LTC++ PT+DC I THKE +L
Sbjct: 61  SDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96

[Close]

BLAST of CSPI01G14710 vs. ExPASy TrEMBL
Match: A0A0A0LY90 (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.3e-82
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI
Sbjct: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]

BLAST of CSPI01G14710 vs. ExPASy TrEMBL
Match: A0A5A7SWN7 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G00770 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.2e-77
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNI KSFGLNSRPSFRA AMA F
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGKIVSGSV+QSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDDDQMA GYLLTC+SLPTADCVIHTHKE ELI
Sbjct: 121 FLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI 154

[Close]

BLAST of CSPI01G14710 vs. ExPASy TrEMBL
Match: A0A5D3E4N5 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003470 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.2e-70
Identity = 133/141 (94.33%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 14  MYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKLVEPCGKEHE 73
           MYNTQSKNQLGSTIIKCPSSIGSTRNI KSFGLNSRPSFRA AMA FKIKLVEPCGKEHE
Sbjct: 1   MYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVFKIKLVEPCGKEHE 60

Query: 74  FEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLL 133
           FEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGKIVSGSV+QSDGSFLDDDQMA GYLL
Sbjct: 61  FEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGSFLDDDQMAKGYLL 120

Query: 134 TCISLPTADCVIHTHKEGELI 155
           TC+SLPTADCVIHTHKE ELI
Sbjct: 121 TCVSLPTADCVIHTHKEEELI 141

[Close]

BLAST of CSPI01G14710 vs. ExPASy TrEMBL
Match: A0A6J1CLH4 (Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111012698 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.2e-66
Identity = 127/154 (82.47%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTA LP+ F  N   KN+   TIIKCPSSIGS  NI +SFGL S PSFR  AMA +
Sbjct: 1   MSTMSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDD QMA GYLLTC+SLPTADCVIHTHKEGELI
Sbjct: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

[Close]

BLAST of CSPI01G14710 vs. ExPASy TrEMBL
Match: A0A6J1FZ83 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 7.0e-65
Identity = 129/156 (82.69%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQS--KNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMA 60
           MSTMSTAKLP+  M+NT +  KNQ  STIIKCPSSIGST NI KSFGL S PS R  AMA
Sbjct: 64  MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 123

Query: 61  AFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSD 120
            +KIKL+EPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 124 VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 183

Query: 121 GSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           GSFLDD QM  GYLLTCIS PT+DCVI THKEGELI
Sbjct: 184 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 219

[Close]

BLAST of CSPI01G14710 vs. NCBI nr
Match: KGN64931.1 (hypothetical protein Csa_022774 [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 2.6e-82
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI
Sbjct: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]

BLAST of CSPI01G14710 vs. NCBI nr
Match: KAA0035450.1 (ferredoxin, root R-B1-like [Cucumis melo var. makuwa])

HSP 1 Score: 298.9 bits (764), Expect = 2.5e-77
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNI KSFGLNSRPSFRA AMA F
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGKIVSGSV+QSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDDDQMA GYLLTC+SLPTADCVIHTHKE ELI
Sbjct: 121 FLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI 154

[Close]

BLAST of CSPI01G14710 vs. NCBI nr
Match: TYK31073.1 (ferredoxin, root R-B2 [Cucumis melo var. makuwa])

HSP 1 Score: 273.9 bits (699), Expect = 8.7e-70
Identity = 133/141 (94.33%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 14  MYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKLVEPCGKEHE 73
           MYNTQSKNQLGSTIIKCPSSIGSTRNI KSFGLNSRPSFRA AMA FKIKLVEPCGKEHE
Sbjct: 1   MYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVFKIKLVEPCGKEHE 60

Query: 74  FEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLL 133
           FEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGKIVSGSV+QSDGSFLDDDQMA GYLL
Sbjct: 61  FEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGSFLDDDQMAKGYLL 120

Query: 134 TCISLPTADCVIHTHKEGELI 155
           TC+SLPTADCVIHTHKE ELI
Sbjct: 121 TCVSLPTADCVIHTHKEEELI 141

[Close]

BLAST of CSPI01G14710 vs. NCBI nr
Match: XP_038893731.1 (ferredoxin, root R-B2 [Benincasa hispida] >XP_038893732.1 ferredoxin, root R-B2 [Benincasa hispida])

HSP 1 Score: 270.0 bits (689), Expect = 1.3e-68
Identity = 132/154 (85.71%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKL THFMYN   KN+L STIIKCPSSI S  NI K FGL SRPSFRACAMA +
Sbjct: 1   MSTMSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPSFRACAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEP G EHEFEASDD YILDAAEEAGIDLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDD QMA GYLLTC+SLPTADCVIHTHKEGEL+
Sbjct: 121 FLDDSQMAEGYLLTCVSLPTADCVIHTHKEGELL 154

[Close]

BLAST of CSPI01G14710 vs. NCBI nr
Match: XP_022142635.1 (ferredoxin, root R-B2 [Momordica charantia])

HSP 1 Score: 261.5 bits (667), Expect = 4.5e-66
Identity = 127/154 (82.47%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTA LP+ F  N   KN+   TIIKCPSSIGS  NI +SFGL S PSFR  AMA +
Sbjct: 1   MSTMSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           FLDD QMA GYLLTC+SLPTADCVIHTHKEGELI
Sbjct: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

[Close]

BLAST of CSPI01G14710 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-42
Identity = 86/154 (55.84%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPS---SIGSTRNILKSFGLN-SRPSFRACAMAA 63
           M+T ++ +  M     ++Q  + +I   S   S+GST+ + +SFGL  S  S  A   A 
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 123
           +K+KL+ P G+E EFE  DD YILDAAEEAG+DLPYSCRAGACSTCAG+IVSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFL+D  +  GY+LTC++ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of CSPI01G14710 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 145.6 bits (366), Expect = 3.3e-35
Identity = 77/151 (50.99%), Postives = 104/151 (68.87%), Query Frame = 0


Query: 2   STMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPS--FRACAMAA 61
           + +S+A + T F+   Q+   L S          +T+++   FGL S  +   R  AMA 
Sbjct: 4   TALSSAIVSTSFLRRQQTPISLRSL------PFANTQSL---FGLKSSTARGGRVTAMAT 63

Query: 62  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 121
           +K+K + P G E E E  +D Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+VSGS+DQSD 
Sbjct: 64  YKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQ 123

Query: 122 SFLDDDQMANGYLLTCISLPTADCVIHTHKE 151
           SFLDD+QM+ GY+LTC++ PT+D VI THKE
Sbjct: 124 SFLDDEQMSEGYVLTCVAYPTSDVVIETHKE 144

[Close]

BLAST of CSPI01G14710 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 143.3 bits (360), Expect = 1.7e-34
Identity = 75/139 (53.96%), Postives = 98/139 (70.50%), Query Frame = 0


Query: 23  LGSTIIK---CPSSIGS--TRNILKSFGLNSRPS--FRACAMAAFKIKLVEPCGKEHEFE 82
           +G++ I+    P S+ S  + N    FGL S  +   R  AMA +K+K + P G E E E
Sbjct: 11  VGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFITPEG-ELEVE 70

Query: 83  ASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTC 142
             DD Y+LDAAEEAGIDLPYSCRAG+CS+CAGK+VSGSVDQSD SFLDD+Q+  G++LTC
Sbjct: 71  CDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQIGEGFVLTC 130

Query: 143 ISLPTADCVIHTHKEGELI 155
            + PT+D  I THKE +++
Sbjct: 131 AAYPTSDVTIETHKEEDIV 148

[Close]

BLAST of CSPI01G14710 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 )

HSP 1 Score: 134.4 bits (337), Expect = 7.7e-32
Identity = 62/113 (54.87%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 44  FGL-NSRPSF-RACAMAAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGA 103
           FGL +SR +F +  A  + K+KL+ P G+E E E ++D  IL++AE AG++LPYSCR+G 
Sbjct: 36  FGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGT 95

Query: 104 CSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 155
           C TC GK+VSG VDQS GSFL+++Q+  GY+LTCI+LP  DCV++THK+ +LI
Sbjct: 96  CGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDLI 148

[Close]

BLAST of CSPI01G14710 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-18
Identity = 57/150 (38.00%), Postives = 80/150 (53.33%), Query Frame = 0


Query: 5   STAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKL 64
           ST  LP  ++ N+ S     +T+    S+  + RN L +  + +R         A+K+ +
Sbjct: 11  STISLPKPYLSNSFSFPLRNATL----STTTNRRNFLTTGRIIAR---------AYKV-V 70

Query: 65  VEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDD 124
           VE  GK  E E   D  IL  A ++G+D+PY C  G C TC  K+V+G+VDQS G  L D
Sbjct: 71  VEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQS-GGMLSD 130

Query: 125 DQMANGYLLTCISLPTADCVIHTHKEGELI 155
           D +  GY L C S PT+DC I    E EL+
Sbjct: 131 DVVERGYTLLCASYPTSDCHIKMIPEEELL 145

The following BLAST results are available for this feature:

BLAST of CSPI01G14710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27788	3.2e-43	62.88	Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1	[more]
Q9ZQG8	1.8e-41	55.84	Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1	[more]
P94044	9.2e-38	53.90	Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1	[more]
P14937	6.6e-36	68.75	Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1	[more]
P00243	2.5e-35	71.13	Ferredoxin OS=Synechocystis sp. (strain PCC 6714) OX=1147 PE=1 SV=2	[more]

BLAST of CSPI01G14710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY90	1.3e-82	100.00	Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1	[more]
A0A5A7SWN7	1.2e-77	94.81	Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G00770 PE=...	[more]
A0A5D3E4N5	4.2e-70	94.33	Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003470 PE...	[more]
A0A6J1CLH4	2.2e-66	82.47	Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111012698 PE=3 SV=1	[more]
A0A6J1FZ83	7.0e-65	82.69	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1	[more]

BLAST of CSPI01G14710 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64931.1	2.6e-82	100.00	hypothetical protein Csa_022774 [Cucumis sativus]	[more]
KAA0035450.1	2.5e-77	94.81	ferredoxin, root R-B1-like [Cucumis melo var. makuwa]	[more]
TYK31073.1	8.7e-70	94.33	ferredoxin, root R-B2 [Cucumis melo var. makuwa]	[more]
XP_038893731.1	1.3e-68	85.71	ferredoxin, root R-B2 [Benincasa hispida] >XP_038893732.1 ferredoxin, root R-B2 ...	[more]
XP_022142635.1	4.5e-66	82.47	ferredoxin, root R-B2 [Momordica charantia]	[more]

BLAST of CSPI01G14710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27510.1	1.3e-42	55.84	ferredoxin 3	[more]
AT1G10960.1	3.3e-35	50.99	ferredoxin 1	[more]
AT1G60950.1	1.7e-34	53.96	2Fe-2S ferredoxin-like superfamily protein	[more]
AT5G10000.1	7.7e-32	54.87	ferredoxin 4	[more]
AT4G14890.1	2.2e-18	38.00	2Fe-2S ferredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 66..140 e-value: 6.0E-22 score: 77.4
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 60..151 score: 12.679967
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 65..146 e-value: 3.39935E-33 score: 110.562
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 57..154 e-value: 5.3E-34 score: 117.9
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 59..153 e-value: 3.3E-46 score: 153.0
None	No IPR available	PANTHER	PTHR43112:SF16	FERREDOXIN	coord: 4..153
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 4..153
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 97..105
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 49..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G14710.1	CSPI01G14710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding