CSPI01G14330 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI01G14330
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr1: 9945215 .. 9946431 (+)
RNA-Seq ExpressionCSPI01G14330
SyntenyCSPI01G14330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCATAATTATTTATTTCTTTTAAAACAATAGAAGGGGAAAGAGTCCAACCAAATAGTTCTTCAAATCTAGCTTTTGGGTTTTACATTTGAACATTTTGTATCATCAATCAGACAACATCAAAATAGTCAGCAGTGGATTATGCTTATGAACAACAATTTAAAAAATCAATGCATAAACAAATCATACAATTTGAATTAAAACACAACACCAATAATAATAATCTTATACTTTGATTTCAACCACTTTTGTTGGCCATGGCCATCTCCATTGGATACCAACCCAACACCCTGAAGAACGAAGCATATTCCTTCAACTCCGCCATAGCTTCTTCACCTTTCCCTTCCTCCATTGACGCCTCAAAGTCCGCATAAAACACATACTCAAACCTCTTCACCCTCTCCTCCACTCTCATCGGACAGCTCCGGTGCGGCCTCGATTCAATCTTCGTCAACTTAATGTTCCTCATCGCAAATGCCGCCAGCACCTTGAATAGAGCCGCCGTTCCTTTCTCCAATGCGAACACTACGCTCGTCTTTAACGCCAAACCCGGTTCCGGAATCACCGGATCTCGTGCTAGGACAACGAATCGCGTCACGTTTCTCGAATCGTCTTGGATTCCGTTCTCGAGGATTTCGAGCCCGTACAGCTCGGCGGCGCGTGCGCTAGCGATTGCGGCTGTATCGCGGAGGTTGTTGAGGGCTACGTGTTCGGCGGCGCCGGCGGTATCGTCGAAGGCTTCACGCGCGGCGTTGAGGCCGAGTTTGGTGAGAGTTTGTTCGCATTGAGCTAGGGCTTGAGGATGGGAAATAATTCTTCTGATGGATTCTGATCGGACTCCTGGTAAGGCTAAGAGGCAATGGTGAACCGGTAGTTGAACTTCGCCGATTATGTGGAGGGTATAGCGGAGGAGAAGATCATAGTTACGATGAATAGAACCGCCAAGGGAGTTTTCAATTGGGAGAACGGCGAGATCGGCAATGCGATTCTCAACCGATTGAAAGGCAGTTTCGAATTGATCGCAGGGGATTGTTACGCAGTTAGGGCAGGCTTTGCCGGCGGCGGCTTCGGAGTAAGCACCGGGAACCCCTTGGTAAGCGACGTGAAGCTTTTGAGCGCCCATTGAAGCCGGAGACTACTTTCCGACGGTTGCGACGGCGTAGCCCTTGAGTTTTTCTTTGTTATTGAGTAATTTACAAAGTGGGTGGACAGAAATG

mRNA sequence

AATCATAATTATTTATTTCTTTTAAAACAATAGAAGGGGAAAGAGTCCAACCAAATAGTTCTTCAAATCTAGCTTTTGGGTTTTACATTTGAACATTTTGTATCATCAATCAGACAACATCAAAATAGTCAGCAGTGGATTATGCTTATGAACAACAATTTAAAAAATCAATGCATAAACAAATCATACAATTTGAATTAAAACACAACACCAATAATAATAATCTTATACTTTGATTTCAACCACTTTTGTTGGCCATGGCCATCTCCATTGGATACCAACCCAACACCCTGAAGAACGAAGCATATTCCTTCAACTCCGCCATAGCTTCTTCACCTTTCCCTTCCTCCATTGACGCCTCAAAGTCCGCATAAAACACATACTCAAACCTCTTCACCCTCTCCTCCACTCTCATCGGACAGCTCCGGTGCGGCCTCGATTCAATCTTCGTCAACTTAATGTTCCTCATCGCAAATGCCGCCAGCACCTTGAATAGAGCCGCCGTTCCTTTCTCCAATGCGAACACTACGCTCGTCTTTAACGCCAAACCCGGTTCCGGAATCACCGGATCTCGTGCTAGGACAACGAATCGCGTCACGTTTCTCGAATCGTCTTGGATTCCGTTCTCGAGGATTTCGAGCCCGTACAGCTCGGCGGCGCGTGCGCTAGCGATTGCGGCTGTATCGCGGAGGTTGTTGAGGGCTACGTGTTCGGCGGCGCCGGCGGTATCGTCGAAGGCTTCACGCGCGGCGTTGAGGCCGAGTTTGGTGAGAGTTTGTTCGCATTGAGCTAGGGCTTGAGGATGGGAAATAATTCTTCTGATGGATTCTGATCGGACTCCTGGTAAGGCTAAGAGGCAATGGTGAACCGGTAGTTGAACTTCGCCGATTATGTGGAGGGTATAGCGGAGGAGAAGATCATAGTTACGATGAATAGAACCGCCAAGGGAGTTTTCAATTGGGAGAACGGCGAGATCGGCAATGCGATTCTCAACCGATTGAAAGGCAGTTTCGAATTGATCGCAGGGGATTGTTACGCAGTTAGGGCAGGCTTTGCCGGCGGCGGCTTCGGAGTAAGCACCGGGAACCCCTTGGTAAGCGACGTGAAGCTTTTGAGCGCCCATTGAAGCCGGAGACTACTTTCCGACGGTTGCGACGGCGTAGCCCTTGAGTTTTTCTTTGTTATTGAGTAATTTACAAAGTGGGTGGACAGAAATG

Coding sequence (CDS)

ATGTTCCTCATCGCAAATGCCGCCAGCACCTTGAATAGAGCCGCCGTTCCTTTCTCCAATGCGAACACTACGCTCGTCTTTAACGCCAAACCCGGTTCCGGAATCACCGGATCTCGTGCTAGGACAACGAATCGCGTCACGTTTCTCGAATCGTCTTGGATTCCGTTCTCGAGGATTTCGAGCCCGTACAGCTCGGCGGCGCGTGCGCTAGCGATTGCGGCTGTATCGCGGAGGTTGTTGAGGGCTACGTGTTCGGCGGCGCCGGCGGTATCGTCGAAGGCTTCACGCGCGGCGTTGAGGCCGAGTTTGGTGAGAGTTTGTTCGCATTGA

Protein sequence

MFLIANAASTLNRAAVPFSNANTTLVFNAKPGSGITGSRARTTNRVTFLESSWIPFSRISSPYSSAARALAIAAVSRRLLRATCSAAPAVSSKASRAALRPSLVRVCSH*
Homology
[Close]
BLAST of CSPI01G14330 vs. ExPASy TrEMBL
Match: A0A0A0LY47 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G145975 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.9e-47
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MFLIANAASTLNRAAVPFSNANTTLVFNAKPGSGITGSRARTTNRVTFLESSWIPFSRIS 60
           MFLIANAASTLNRAAVPFSNANTTLVFNAKPGSGITGSRARTTNRVTFL+SSWIPFSRIS
Sbjct: 1   MFLIANAASTLNRAAVPFSNANTTLVFNAKPGSGITGSRARTTNRVTFLKSSWIPFSRIS 60

Query: 61  SPYSSAARALAIAAVSRRLLRATCSAAPAVSSKASRAALRPSLVRVCSH 110
           SPYSSAARALAIAAVSRRLLRATCSAAPAVSSKASRAALRPSLVRVCSH
Sbjct: 61  SPYSSAARALAIAAVSRRLLRATCSAAPAVSSKASRAALRPSLVRVCSH 109

[Close]
BLAST of CSPI01G14330 vs. ExPASy TrEMBL
Match: A0A7C9D5Y8 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.1e-19
Identity = 71/114 (62.28%), Postives = 76/114 (66.67%), Query Frame = 0 

Query: 1   MFLIANAASTLNRAAVPFSN-----ANTTLVFNAKPGSGITGSRARTTNRVTFLESSWIP 60
           MF  A A STL R AVP        ANT LV N +   GI GSRA  TNRVT LESS IP
Sbjct: 33  MFRKAKAESTLKREAVPLPTPSSWVANTMLVLNGRSVRGIIGSRASITNRVTLLESSCIP 92

Query: 61  FSRISSPYSSAARALAIAAVSRRLLRATCSAAPAVSSKASRAALRPSLVRVCSH 110
            +   SPYSSAARA AIAAVS + L AT SAAPAVSSKASR   +P+LV VCSH
Sbjct: 93  SANTCSPYSSAARAEAIAAVSLKRLVATYSAAPAVSSKASRVTFKPNLVSVCSH 146

[Close]
BLAST of CSPI01G14330 vs. ExPASy TrEMBL
Match: A0A444Y7Q4 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g093951 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 4.3e-16
Identity = 59/81 (72.84%), Postives = 61/81 (75.31%), Query Frame = 0 

Query: 25  LVFNAKPGSGITGSRARTTNRVTFLESSWIPFSRISSPYSSAARALAIAAVSRRLLRATC 84
           LV N     GI GSRA  TNRVT L SSWIP ++  SPYSSAARALAIAAVSRR L AT 
Sbjct: 2   LVLNGLSVRGIIGSRASITNRVTLLGSSWIPSAKTWSPYSSAARALAIAAVSRRQLTATN 61

Query: 85  SAAPAVSSKASRAALRPSLVR 106
           SAAPAVSS ASRA LRPS VR
Sbjct: 62  SAAPAVSSTASRATLRPSFVR 82

[Close]
BLAST of CSPI01G14330 vs. ExPASy TrEMBL
Match: A0A0E0GFT0 (Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.8e-06
Identity = 40/71 (56.34%), Postives = 45/71 (63.38%), Query Frame = 0 

Query: 5   ANAASTLNRAAVP-FSNANTTLVFNAKPGSGITGSRARTTNRVTFLESSWIPFSRISSPY 64
           A A STL    VP  S ANT LV N +   G+ GSRA  TNRVTF  SSW+P +   SPY
Sbjct: 37  AKADSTLKSTDVPSLSCANTMLVLNGRSVRGMMGSRASITNRVTFPASSWMPSASTWSPY 96

Query: 65  SSAARALAIAA 75
           SSAAR  A+AA
Sbjct: 97  SSAAREDAMAA 107

[Close]
BLAST of CSPI01G14330 vs. ExPASy TrEMBL
Match: C4J5Q5 (Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 9.8e-05
Identity = 46/104 (44.23%), Postives = 58/104 (55.77%), Query Frame = 0 

Query: 7   AASTLNRAAVPFSNANTTLVFNAK---PGSGITGSRA--RTTNRVTFLESSWIPFSRISS 66
           A STL+   +      TT++  A    P +  TG     R+ NRVTF +SSW P +R  S
Sbjct: 15  AESTLSTTTMEPPRCATTMLVLASASTPSATATGDGGLERSRNRVTFQDSSWSPCARTWS 74

Query: 67  PYSSAARALAIAAVSRRLLRATCSAAPAVSSKASRAALRPSLVR 106
           PY SAAR LA+AAVS   L  + S APAVSS  SR+  R +  R
Sbjct: 75  PYRSAARGLAMAAVSSIRLDRSISTAPAVSSTGSRSTPRRASAR 118

[Close]
BLAST of CSPI01G14330 vs. NCBI nr
Match: RYQ97876.1 (hypothetical protein Ahy_B08g093951 [Arachis hypogaea])

HSP 1 Score: 94.0 bits (232), Expect = 8.8e-16
Identity = 59/81 (72.84%), Postives = 61/81 (75.31%), Query Frame = 0 

Query: 25  LVFNAKPGSGITGSRARTTNRVTFLESSWIPFSRISSPYSSAARALAIAAVSRRLLRATC 84
           LV N     GI GSRA  TNRVT L SSWIP ++  SPYSSAARALAIAAVSRR L AT 
Sbjct: 2   LVLNGLSVRGIIGSRASITNRVTLLGSSWIPSAKTWSPYSSAARALAIAAVSRRQLTATN 61

Query: 85  SAAPAVSSKASRAALRPSLVR 106
           SAAPAVSS ASRA LRPS VR
Sbjct: 62  SAAPAVSSTASRATLRPSFVR 82

[Close]
BLAST of CSPI01G14330 vs. NCBI nr
Match: ACR36505.1 (unknown [Zea mays])

HSP 1 Score: 56.2 bits (134), Expect = 2.0e-04
Identity = 46/104 (44.23%), Postives = 58/104 (55.77%), Query Frame = 0 

Query: 7   AASTLNRAAVPFSNANTTLVFNAK---PGSGITGSRA--RTTNRVTFLESSWIPFSRISS 66
           A STL+   +      TT++  A    P +  TG     R+ NRVTF +SSW P +R  S
Sbjct: 15  AESTLSTTTMEPPRCATTMLVLASASTPSATATGDGGLERSRNRVTFQDSSWSPCARTWS 74

Query: 67  PYSSAARALAIAAVSRRLLRATCSAAPAVSSKASRAALRPSLVR 106
           PY SAAR LA+AAVS   L  + S APAVSS  SR+  R +  R
Sbjct: 75  PYRSAARGLAMAAVSSIRLDRSISTAPAVSSTGSRSTPRRASAR 118

The following BLAST results are available for this feature:
BLAST of CSPI01G14330 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI01G14330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY477.9e-4799.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G145975 PE=4 SV=1[more]
A0A7C9D5Y81.1e-1962.28Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1[more]
A0A444Y7Q44.3e-1672.84Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g093951 PE=4 SV=1[more]
A0A0E0GFT06.8e-0656.34Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1[more]
C4J5Q59.8e-0544.23Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1[more]
BLAST of CSPI01G14330 vs. NCBI nr
Match NameE-valueIdentityDescription
RYQ97876.18.8e-1672.84hypothetical protein Ahy_B08g093951 [Arachis hypogaea][more]
ACR36505.12.0e-0444.23unknown [Zea mays][more]
BLAST of CSPI01G14330 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G14330.1CSPI01G14330.1mRNA