CSPI01G14020 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G14020
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	LEA_2 domain-containing protein
Location	Chr1: 9578532 .. 9580129 (+)
RNA-Seq Expression	CSPI01G14020
Synteny	CSPI01G14020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATATCAAACCCCAAAAGAAGTAAAGATTTGTTTGAAGAAGAACAATGAGAAGTACTACTACTACTACTACACATGGGATAACAAAACGGACAAGGCTCATTAGAGTTCTAGGAAGAAGCTTGTTGGGAGTTATATTCCTTGTTGCTCTTGGAATGATCATATGTTGGCTTGTTGTCATCCCCAAATCCCCACGTCTCATTGTGGAAACTGGCAAAGTCATCGCCCATAGTTCAACTATTAGTATGCTCAATGCCACCATAGCTTTCACTGTCAAAAGCTACAACCCTAACAAAAGAGCCTCCATTCACATGGATTATATGAGGATGATAGTCGATAACATGGGCGTGAGGTTTTCCTCCGCCATCCCCTCCTTCACCCTCACGCCCAGAAACCAAACCGTCTTGTCGTCAGCCGTCCAAGTCAACTTTGAATACCCATTTGGGTACACGGAAGAGATAAACCCAGAACTTCAATTCTCAGCTGAAGTCAGGTACAATCATTTAGAGATAACTTTAAAGTCAGACCCAAATTTTTGGATCAAAATGGAATATGCTCAACTTTTAAAAATATAAGTTTTCTTTTTACTATTTATTTTTACTATTTGCTTGTGTCATATTCTGCGAAAATTGGCAAAACTTTTTTGTGTGAGAATGGGAGAGAAAAATCAAACTTAGCGGAATGAGAGGAGCAAGAGAAAATAGCCGTATCAGAAAAGGCGAGGGAAGCGAGAGAAAATAGATGTGAGGAGCAAAATTTCTAAATCCAAAAGAATGAGAGAGAAACCAGAGGAAATAGGAGAGAGCAATGACCTGAAAGGTGTAACTCAAAGAAATGAAAAAACAAGATCATAATCTGCGTGGAAAATCGTCAAATTTGATAATTTTTACAAAATATGATCTAACAAGATCATAAGAAAACCCTTTTATTTTTTGTTTCAGATTTTAAAAACTAATTAATTTTATGGTTTGTACTTTTCACAAGTAAATTTCTAGTTCCATAATCTAAATCTATTTTTTATAAGGGTAACTCCATGCGACCATGCAGGGGTACGCAACGCTACCCCTTTCAAACACTAATAATTATAAATGCTTTGCAAAATTTTTAAAGATTTGTATGCATAACAATAAAATTCATCTATCATTATCACTACACTAGTAGAACTCCTTGACTTCTAATGATATGATCTTTTCCAATTCATAAATATACTTCTAGAACTTAATTTTAATTTTTTCATATTTTCATACTACAAGTTCTTTTGCATTATTTTATATCTGGTTGTTATATTTGAAACCGTCTCGTTCTTTTATTATACTAAATAGTATATTCTTTTTATTGTTTTACTTTTAGATTTTGAATATTAAATTTTGTCTCTCTCTATTTTTTTTGTTGGGCTTTGTCCTTATCAGTTACAGTATCAAGAAATGGATGTCAAAACCTCGATTGCTTGAGATATATTGTAATCATCTCTTGCTTAAAATCAATGATTCAACCGCGTTTGATAATACCAAATGCAAAGTGGATTTTTGAGATTTGACGATCTTGAGGATACAGTTCTTGCTGAATAATCCCAAAGAACACATTTGTTACCCAAAGTT

mRNA sequence

CAAATATCAAACCCCAAAAGAAGTAAAGATTTGTTTGAAGAAGAACAATGAGAAGTACTACTACTACTACTACACATGGGATAACAAAACGGACAAGGCTCATTAGAGTTCTAGGAAGAAGCTTGTTGGGAGTTATATTCCTTGTTGCTCTTGGAATGATCATATGTTGGCTTGTTGTCATCCCCAAATCCCCACGTCTCATTGTGGAAACTGGCAAAGTCATCGCCCATAGTTCAACTATTAGTATGCTCAATGCCACCATAGCTTTCACTGTCAAAAGCTACAACCCTAACAAAAGAGCCTCCATTCACATGGATTATATGAGGATGATAGTCGATAACATGGGCGTGAGGTTTTCCTCCGCCATCCCCTCCTTCACCCTCACGCCCAGAAACCAAACCGTCTTGTCGTCAGCCGTCCAAGTCAACTTTGAATACCCATTTGGGTACACGGAAGAGATAAACCCAGAACTTCAATTCTCAGCTGAAGTCAGTTACAGTATCAAGAAATGGATGTCAAAACCTCGATTGCTTGAGATATATTGTAATCATCTCTTGCTTAAAATCAATGATTCAACCGCGTTTGATAATACCAAATGCAAAGTGGATTTTTGAGATTTGACGATCTTGAGGATACAGTTCTTGCTGAATAATCCCAAAGAACACATTTGTTACCCAAAGTT

Coding sequence (CDS)

ATGAGAAGTACTACTACTACTACTACACATGGGATAACAAAACGGACAAGGCTCATTAGAGTTCTAGGAAGAAGCTTGTTGGGAGTTATATTCCTTGTTGCTCTTGGAATGATCATATGTTGGCTTGTTGTCATCCCCAAATCCCCACGTCTCATTGTGGAAACTGGCAAAGTCATCGCCCATAGTTCAACTATTAGTATGCTCAATGCCACCATAGCTTTCACTGTCAAAAGCTACAACCCTAACAAAAGAGCCTCCATTCACATGGATTATATGAGGATGATAGTCGATAACATGGGCGTGAGGTTTTCCTCCGCCATCCCCTCCTTCACCCTCACGCCCAGAAACCAAACCGTCTTGTCGTCAGCCGTCCAAGTCAACTTTGAATACCCATTTGGGTACACGGAAGAGATAAACCCAGAACTTCAATTCTCAGCTGAAGTCAGTTACAGTATCAAGAAATGGATGTCAAAACCTCGATTGCTTGAGATATATTGTAATCATCTCTTGCTTAAAATCAATGATTCAACCGCGTTTGATAATACCAAATGCAAAGTGGATTTTTGA

Protein sequence

MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLSSAVQVNFEYPFGYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHLLLKINDSTAFDNTKCKVDF*

Homology

[Close]

BLAST of CSPI01G14020 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.8e-04
Identity = 49/179 (27.37%), Postives = 77/179 (43.02%), Query Frame = 0


Query: 26  LLGVIFLVALGMIICWLVVIPKSPRLIVETGKV--IAHSSTISMLNATIAFTVKSYNPNK 85
           LLG+  LV L ++I +L + PK     VE   V   A  +    +NA  ++ +KSYNP K
Sbjct: 46  LLGL--LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEK 105

Query: 86  RASIHMDYMRMIV--DNMGVRFSSAIPSFTLTPRNQTVLS-------------SAVQVNF 145
             S+    MR+     N  V   +  P F   P+N+T +              +A  +  
Sbjct: 106 HVSVRYHSMRISTAHHNQSVAHKNISP-FKQRPKNETRIETQLVSHNVALSKFNARDLRA 165

Query: 146 EYPFGYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHLLLKINDST--AFDNTKCK 186
           E   G    I  E+  +A VSY    + S+ R L+  C  +++ +  S+   F    CK
Sbjct: 166 EKSKG---TIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCK 218

[Close]

BLAST of CSPI01G14020 vs. ExPASy TrEMBL
Match: A0A0A0LY09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.2e-97
Identity = 187/188 (99.47%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIA 60
           MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIA
Sbjct: 1   MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIA 60

Query: 61  HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL 120
           HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL
Sbjct: 61  HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL 120

Query: 121 SSAVQVNFEYPFGYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHLLLKINDSTAFD 180
           SSAVQVNFEYPFGYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNH+LLKINDSTAFD
Sbjct: 121 SSAVQVNFEYPFGYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHILLKINDSTAFD 180

Query: 181 NTKCKVDF 189
           NTKCKVDF
Sbjct: 181 NTKCKVDF 188

[Close]

BLAST of CSPI01G14020 vs. ExPASy TrEMBL
Match: A0A1S3CGS4 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.4e-93
Identity = 177/187 (94.65%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIA 60
           MRSTT TTTHGITKRTRLIR++GRSLLGVIFLVALGMIICWLVVIPK+PRLIVETGKV+ 
Sbjct: 1   MRSTTATTTHGITKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVV 60

Query: 61  HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL 120
           HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL
Sbjct: 61  HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL 120

Query: 121 SSAVQVNFEYPFGYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHLLLKINDSTAFD 180
            SAVQVNFEYPFGYTEEINPELQFSAEVSYS++KWMSKPRLLEIYCNHLLLKINDST FD
Sbjct: 121 WSAVQVNFEYPFGYTEEINPELQFSAEVSYSVEKWMSKPRLLEIYCNHLLLKINDSTTFD 180

Query: 181 NTKCKVD 188
           NTKCKVD
Sbjct: 181 NTKCKVD 187

[Close]

BLAST of CSPI01G14020 vs. ExPASy TrEMBL
Match: A0A5A7TG86 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00050 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.3e-69
Identity = 141/150 (94.00%), Postives = 146/150 (97.33%), Query Frame = 0


Query: 1   MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIA 60
           MRSTT TTTHGITKRTRLIR++GRSLLGVIFLVALGMIICWLVVIPK+PRLIVETGKV+ 
Sbjct: 1   MRSTTATTTHGITKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVV 60

Query: 61  HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL 120
           HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL
Sbjct: 61  HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL 120

Query: 121 SSAVQVNFEYPFGYTEEINPELQFSAEVSY 151
            SAVQVNFEYPFGYTEEINPELQFSAEV +
Sbjct: 121 WSAVQVNFEYPFGYTEEINPELQFSAEVRF 150

[Close]

BLAST of CSPI01G14020 vs. ExPASy TrEMBL
Match: A0A0A0LVK9 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132770 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 6.5e-65
Identity = 124/175 (70.86%), Postives = 149/175 (85.14%), Query Frame = 0


Query: 13  TKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSSTISMLNATI 72
           TK+TR+IR++GRSLL VIFLV L M+ICWLVV PK+PR+ VETG+VIAH+ST +MLNATI
Sbjct: 25  TKKTRIIRIIGRSLLSVIFLVGLAMVICWLVVFPKNPRIFVETGRVIAHNSTHNMLNATI 84

Query: 73  AFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLSSAVQVNFEYPF 132
            FTVK YNPNKRAS+H+  MRMIV +MG  FSS IP+F  TP NQTVLS AV+VNF+YPF
Sbjct: 85  VFTVKCYNPNKRASVHLHSMRMIVTSMGQAFSSVIPTFMQTPGNQTVLSPAVEVNFDYPF 144

Query: 133 GYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHLLLKINDSTAFDNTKCKVD 188
           G+ EEINPEL FSAE+SYS++ W S+PRLL IYCN+LLL+IND+  F+NTKC VD
Sbjct: 145 GHQEEINPELHFSAEISYSVEHWTSRPRLLLIYCNNLLLRINDTRTFENTKCNVD 199

[Close]

BLAST of CSPI01G14020 vs. ExPASy TrEMBL
Match: A0A5A7TF76 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00100 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.9e-64
Identity = 131/199 (65.83%), Postives = 155/199 (77.89%), Query Frame = 0


Query: 1   MRSTTTTT------------THGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKS 60
           MRS TTT              +  TK+TR+IR++GR LL VIFLV L M+ICWLVV PK+
Sbjct: 1   MRSITTTKGEASSSRKSSKGQNETTKKTRIIRIIGRCLLSVIFLVGLAMVICWLVVFPKN 60

Query: 61  PRLIVETGKVIAHSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIP 120
           PR +VETGKVIAH+ST +MLNATIAFTVK YNPNKRASIH+  MRMI+ +MG  FSSA+P
Sbjct: 61  PRFVVETGKVIAHNSTHNMLNATIAFTVKCYNPNKRASIHLHSMRMIITSMGQAFSSAMP 120

Query: 121 SFTLTPRNQTVLSSAVQVNFEYPFGYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNH 180
            F  TP NQTVLS AV VNF+YPFG+ EEINPEL FSAE+SYS+  W S+PRLL+IYCN+
Sbjct: 121 MFMQTPGNQTVLSPAVDVNFDYPFGHREEINPELHFSAEISYSVGHWTSRPRLLQIYCNN 180

Query: 181 LLLKINDSTAFDNTKCKVD 188
           LLL+IND+  F+NTKC VD
Sbjct: 181 LLLRINDTRTFENTKCNVD 199

[Close]

BLAST of CSPI01G14020 vs. NCBI nr
Match: XP_011654134.1 (NDR1/HIN1-like protein 10 isoform X2 [Cucumis sativus])

HSP 1 Score: 364.8 bits (935), Expect = 4.6e-97
Identity = 187/188 (99.47%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIA 60
           MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIA
Sbjct: 1   MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIA 60

Query: 61  HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL 120
           HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL
Sbjct: 61  HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL 120

Query: 121 SSAVQVNFEYPFGYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHLLLKINDSTAFD 180
           SSAVQVNFEYPFGYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNH+LLKINDSTAFD
Sbjct: 121 SSAVQVNFEYPFGYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHILLKINDSTAFD 180

Query: 181 NTKCKVDF 189
           NTKCKVDF
Sbjct: 181 NTKCKVDF 188

[Close]

BLAST of CSPI01G14020 vs. NCBI nr
Match: XP_008462348.1 (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92
Identity = 177/187 (94.65%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIA 60
           MRSTT TTTHGITKRTRLIR++GRSLLGVIFLVALGMIICWLVVIPK+PRLIVETGKV+ 
Sbjct: 1   MRSTTATTTHGITKRTRLIRLVGRSLLGVIFLVALGMIICWLVVIPKTPRLIVETGKVVV 60

Query: 61  HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL 120
           HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL
Sbjct: 61  HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL 120

Query: 121 SSAVQVNFEYPFGYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHLLLKINDSTAFD 180
            SAVQVNFEYPFGYTEEINPELQFSAEVSYS++KWMSKPRLLEIYCNHLLLKINDST FD
Sbjct: 121 WSAVQVNFEYPFGYTEEINPELQFSAEVSYSVEKWMSKPRLLEIYCNHLLLKINDSTTFD 180

Query: 181 NTKCKVD 188
           NTKCKVD
Sbjct: 181 NTKCKVD 187

[Close]

BLAST of CSPI01G14020 vs. NCBI nr
Match: XP_038895359.1 (NDR1/HIN1-like protein 10 [Benincasa hispida])

HSP 1 Score: 282.0 bits (720), Expect = 3.9e-72
Identity = 141/178 (79.21%), Postives = 157/178 (88.20%), Query Frame = 0


Query: 10  HGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSSTISMLN 69
           HG  KRTR+IR++GRSLLGVIFLV L +IICWLVV+PK+PRLIVETG VI HSST +ML 
Sbjct: 24  HGTAKRTRIIRIIGRSLLGVIFLVGLAIIICWLVVVPKTPRLIVETGNVIVHSSTHNMLK 83

Query: 70  ATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVLSSAVQVNFE 129
           ATI FT +SYNPNKRA+IHM  MRMIV+++G RF S IPSFTLTP NQTVLSSAV+VNFE
Sbjct: 84  ATIVFTFRSYNPNKRATIHMYSMRMIVNSIGERFLSDIPSFTLTPENQTVLSSAVRVNFE 143

Query: 130 YPFGYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHLLLKINDSTAFDNTKCKVD 188
           YPFG+ EEI+PEL+FSAEVSYSI  WMSKPRLLEIYCNHLLLKIN ST FDNTKCKVD
Sbjct: 144 YPFGFNEEIDPELRFSAEVSYSINGWMSKPRLLEIYCNHLLLKINASTTFDNTKCKVD 201

[Close]

BLAST of CSPI01G14020 vs. NCBI nr
Match: KAE8652784.1 (hypothetical protein Csa_022865 [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 6.7e-72
Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIA 60
           MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIA
Sbjct: 1   MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIA 60

Query: 61  HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL 120
           HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL
Sbjct: 61  HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL 120

Query: 121 SSAVQVNFEYPFGYTEEINPELQFSAEVSY 151
           SSAVQVNFEYPFGYTEEINPELQFSAEV +
Sbjct: 121 SSAVQVNFEYPFGYTEEINPELQFSAEVRF 150

[Close]

BLAST of CSPI01G14020 vs. NCBI nr
Match: XP_011654126.1 (NDR1/HIN1-like protein 10 isoform X1 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 1.1e-71
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIA 60
           MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIA
Sbjct: 1   MRSTTTTTTHGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIA 60

Query: 61  HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL 120
           HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL
Sbjct: 61  HSSTISMLNATIAFTVKSYNPNKRASIHMDYMRMIVDNMGVRFSSAIPSFTLTPRNQTVL 120

Query: 121 SSAVQVNFEYPFGYTEEINPELQFSAEV 149
           SSAVQVNFEYPFGYTEEINPELQFSAEV
Sbjct: 121 SSAVQVNFEYPFGYTEEINPELQFSAEV 148

[Close]

BLAST of CSPI01G14020 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 58.5 bits (140), Expect = 6.5e-09
Identity = 47/186 (25.27%), Postives = 86/186 (46.24%), Query Frame = 0


Query: 14  KRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHSST-ISMLNATI 73
           +R  LI  +   +L +IF+ A+G +I WL   PK  R  VE   V   + T  + ++AT 
Sbjct: 21  RRPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATF 80

Query: 74  AFTVKSYNPNKRASIHMDYMRMIV--DNMGVRFSSA----IPSFTLTPRNQTVLSSAVQV 133
            FT++S+NPN R S++   + + V   +  + F +      P   +   ++T+++  V V
Sbjct: 81  QFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAV 140

Query: 134 NFEYPFGYTEE-----INPELQFSAEVSYSIKKWMSKPRLLEIYCNHLLLKINDSTAFDN 188
           +         +     I  E+   A V + +  W S  R  +I C+H+ + ++      N
Sbjct: 141 SKSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKSQN 200

[Close]

BLAST of CSPI01G14020 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 47.0 bits (110), Expect = 2.0e-05
Identity = 49/179 (27.37%), Postives = 77/179 (43.02%), Query Frame = 0


Query: 26  LLGVIFLVALGMIICWLVVIPKSPRLIVETGKV--IAHSSTISMLNATIAFTVKSYNPNK 85
           LLG+  LV L ++I +L + PK     VE   V   A  +    +NA  ++ +KSYNP K
Sbjct: 46  LLGL--LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEK 105

Query: 86  RASIHMDYMRMIV--DNMGVRFSSAIPSFTLTPRNQTVLS-------------SAVQVNF 145
             S+    MR+     N  V   +  P F   P+N+T +              +A  +  
Sbjct: 106 HVSVRYHSMRISTAHHNQSVAHKNISP-FKQRPKNETRIETQLVSHNVALSKFNARDLRA 165

Query: 146 EYPFGYTEEINPELQFSAEVSYSIKKWMSKPRLLEIYCNHLLLKINDST--AFDNTKCK 186
           E   G    I  E+  +A VSY    + S+ R L+  C  +++ +  S+   F    CK
Sbjct: 166 EKSKG---TIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCK 218

[Close]

BLAST of CSPI01G14020 vs. TAIR 10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 43.1 bits (100), Expect = 2.8e-04
Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 24  RSLLGVIF--LVALGMI--ICWLVVIPKSPRLIVETGKVIAHSSTI-SMLNATIAFTVKS 83
           R++ G IF  LV LG+I  I WLV  P  PRL V    +   + T   +++ ++ F+V +
Sbjct: 42  RAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVLA 101

Query: 84  YNPNKRASIHMDYMRMIV 97
            NPN+R SIH D + M V
Sbjct: 102 RNPNRRVSIHYDKLSMYV 119

[Close]

BLAST of CSPI01G14020 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 42.4 bits (98), Expect = 4.9e-04
Identity = 28/104 (26.92%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 10  HGITKRTRLIRVLGRSLLGVIFLVALGMIICWLVVIPKSPRLIVETGKVIAHS---STIS 69
           HG ++R +LIR +  S++ V+F++ L +++ W ++ P  PR I++   V A +   +  +
Sbjct: 7   HGHSRR-KLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNPPN 66

Query: 70  MLNATIAFTVKSYNPNKRASIHMDYMRMIVD--NMGVRFSSAIP 109
           +L +    T+ S NPN +  I+ D + +     +  + F ++IP
Sbjct: 67  LLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIP 109

The following BLAST results are available for this feature:

BLAST of CSPI01G14020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ13	2.8e-04	27.37	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]

BLAST of CSPI01G14020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY09	2.2e-97	99.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132760 PE=4 SV=1	[more]
A0A1S3CGS4	7.4e-93	94.65	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103500718 PE=4 SV=1	[more]
A0A5A7TG86	3.3e-69	94.00	Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00...	[more]
A0A0A0LVK9	6.5e-65	70.86	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132770 PE=4 ...	[more]
A0A5A7TF76	1.9e-64	65.83	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of CSPI01G14020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654134.1	4.6e-97	99.47	NDR1/HIN1-like protein 10 isoform X2 [Cucumis sativus]	[more]
XP_008462348.1	1.5e-92	94.65	PREDICTED: protein YLS9-like [Cucumis melo]	[more]
XP_038895359.1	3.9e-72	79.21	NDR1/HIN1-like protein 10 [Benincasa hispida]	[more]
KAE8652784.1	6.7e-72	98.67	hypothetical protein Csa_022865 [Cucumis sativus]	[more]
XP_011654126.1	1.1e-71	100.00	NDR1/HIN1-like protein 10 isoform X1 [Cucumis sativus]	[more]

BLAST of CSPI01G14020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22870.1	6.5e-09	25.27	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G08160.1	2.0e-05	27.37	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G01410.1	2.8e-04	39.74	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	4.9e-04	26.92	NDR1/HIN1-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 13..184
None	No IPR available	PANTHER	PTHR31852:SF1	NDR1/HIN1-LIKE PROTEIN 6	coord: 13..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G14020.1	CSPI01G14020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane