CSPI01G14000 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI01G14000
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	LEA_2 domain-containing protein
Location	Chr1: 9560711 .. 9561705 (+)
RNA-Seq Expression	CSPI01G14000
Synteny	CSPI01G14000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAGTACTACTACACAAGGAGAAGGAGCATCATCCTCCATTATTGAGGCACCAAAACGAAGCTTCTGTAGACAACGTGAGACAACAAAACGCACAAGAATCATAAGAATCATAGGAAGAAGTTTGTTGTCTGTAATAATCTTCTTGAGTGTTGCAATTATCACATGTTGGCTTGTTGTTTTCCCCAGAACCCCACGTCTCATGGTGGAAACTAGCAAAGTGACAGCCCATGGTTCAACTAATAGACACCTCAATGCAACCATAGTTTTCTATATCAAAAGCTACAACCCTAACAAAAAAGCCTCCATTCACATGGATTCTGTGAAGATGATAGTCAGTGATTATATGGGGCTACCGTTTCACTCCACCATCCCCACCTTCACGTTGATGCCTCGAAACGAGATGGTCTTCAACTCAACCGTTCGTGTCAACTTCATGTACCCATTTGGGCGCCCGGTGCATTCGGACTGGGTACATCTAGAGCTTCGCTTCTCTGCTCAAGTTAGGTACGTACAAACATGTATGAACATAGAAGTGTTGTTGGTTTTGTTGGTGTAAAGTATTTATTTTTATTCTTACTTTAGAATTAGAATTAGTTTTGAAAAACTCTTAAAATTTTAGGAGTATTATTTTTTACACAAAATGGTAACTGTTCTATCATTTTTGAATTCTTTTTGACATATAAGAGTATTTTCTAAACATTTGAAAGTTGAAATATATTTTTTGACATAAGTAAAAAGTTGGAAGAGATATTTTGTATAATTTTGCCTTAATTGCTTTTAGATTTTAATTAAAATTAAACCGATGGATACTACTAATGCCAAAATTTGCCTATATCTTTAAAAAGTCATGGCTTTGTTTGTATCAGTTACATTGTGAACAGATGGAGGTCGAAACCACGATTGCTGGAGATCTATTGTGATCACCTTTGGCTTAGGATTAATGATTCTACCCCTAATTTTGACAAAACCAAATGCAGAGTGGATCTTTAA

mRNA sequence

ATGAGGAGTACTACTACACAAGGAGAAGGAGCATCATCCTCCATTATTGAGGCACCAAAACGAAGCTTCTGTAGACAACGTGAGACAACAAAACGCACAAGAATCATAAGAATCATAGGAAGAAGTTTGTTGTCTGTAATAATCTTCTTGAGTGTTGCAATTATCACATGTTGGCTTGTTGTTTTCCCCAGAACCCCACGTCTCATGGTGGAAACTAGCAAAGTGACAGCCCATGGTTCAACTAATAGACACCTCAATGCAACCATAGTTTTCTATATCAAAAGCTACAACCCTAACAAAAAAGCCTCCATTCACATGGATTCTGTGAAGATGATAGTCAGTGATTATATGGGGCTACCGTTTCACTCCACCATCCCCACCTTCACGTTGATGCCTCGAAACGAGATGGTCTTCAACTCAACCGTTCGTGTCAACTTCATGTACCCATTTGGGCGCCCGGTGCATTCGGACTGGGTACATCTAGAGCTTCGCTTCTCTGCTCAAGTTAGTTACATTGTGAACAGATGGAGGTCGAAACCACGATTGCTGGAGATCTATTGTGATCACCTTTGGCTTAGGATTAATGATTCTACCCCTAATTTTGACAAAACCAAATGCAGAGTGGATCTTTAA

Coding sequence (CDS)

ATGAGGAGTACTACTACACAAGGAGAAGGAGCATCATCCTCCATTATTGAGGCACCAAAACGAAGCTTCTGTAGACAACGTGAGACAACAAAACGCACAAGAATCATAAGAATCATAGGAAGAAGTTTGTTGTCTGTAATAATCTTCTTGAGTGTTGCAATTATCACATGTTGGCTTGTTGTTTTCCCCAGAACCCCACGTCTCATGGTGGAAACTAGCAAAGTGACAGCCCATGGTTCAACTAATAGACACCTCAATGCAACCATAGTTTTCTATATCAAAAGCTACAACCCTAACAAAAAAGCCTCCATTCACATGGATTCTGTGAAGATGATAGTCAGTGATTATATGGGGCTACCGTTTCACTCCACCATCCCCACCTTCACGTTGATGCCTCGAAACGAGATGGTCTTCAACTCAACCGTTCGTGTCAACTTCATGTACCCATTTGGGCGCCCGGTGCATTCGGACTGGGTACATCTAGAGCTTCGCTTCTCTGCTCAAGTTAGTTACATTGTGAACAGATGGAGGTCGAAACCACGATTGCTGGAGATCTATTGTGATCACCTTTGGCTTAGGATTAATGATTCTACCCCTAATTTTGACAAAACCAAATGCAGAGTGGATCTTTAA

Protein sequence

MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLVVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKPRLLEIYCDHLWLRINDSTPNFDKTKCRVDL*

Homology

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BLAST of CSPI01G14000 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.9e-08
Identity = 46/179 (25.70%), Postives = 85/179 (47.49%), Query Frame = 0


Query: 42  SLLSVIIFLSVAIITCWLVVFPRTPRLMVETSKVT--AHGSTNRHLNATIVFYIKSYNPN 101
           +L+ + + + +AI+  +L + P+     VE + V   A G+ + H+NA   + IKSYNP 
Sbjct: 43  ALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPE 102

Query: 102 KKASIHMDSVKMIVSDYMGLPFHSTIPTFTLMPRNE------MVFNSTVRVNFMYPFGRP 161
           K  S+   S+++  + +     H  I  F   P+NE      +V ++     F     R 
Sbjct: 103 KHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRA 162

Query: 162 VHS-DWVHLELRFSAQVSYIVNRWRSKPRLLEIYCDHLWLRINDST-PNFDKTKCRVDL 211
             S   + +E+  +A+VSY    +RS+ R L+  C  + + +  S+   F +  C+  L
Sbjct: 163 EKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

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BLAST of CSPI01G14000 vs. ExPASy TrEMBL
Match: A0A0A0LSU5 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132730 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.5e-115
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLV 60
           MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLV
Sbjct: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLV 60

Query: 61  VFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLP 120
           VFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLP
Sbjct: 61  VFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLP 120

Query: 121 FHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKP 180
           FHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKP
Sbjct: 121 FHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKP 180

Query: 181 RLLEIYCDHLWLRINDSTPNFDKTKCRVDL 211
           RLLEIYCDHLWLRINDSTPNFDKTKCRVDL
Sbjct: 181 RLLEIYCDHLWLRINDSTPNFDKTKCRVDL 210

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BLAST of CSPI01G14000 vs. ExPASy TrEMBL
Match: A0A1S3CGU2 (uncharacterized protein At1g08160-like OS=Cucumis melo OX=3656 GN=LOC103500758 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 3.9e-103
Identity = 190/211 (90.05%), Postives = 201/211 (95.26%), Query Frame = 0


Query: 1   MRSTTTQGEGASSSIIEAPKRSFCRQR-ETTKRTRIIRIIGRSLLSVIIFLSVAIITCWL 60
           MRSTTTQ E ASSSI+EAPKRSF RQR ETTKRTRIIRIIGRSLL VIIFLSVAIITCWL
Sbjct: 1   MRSTTTQEEEASSSIVEAPKRSFYRQRHETTKRTRIIRIIGRSLLCVIIFLSVAIITCWL 60

Query: 61  VVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGL 120
           VVFPRTPRLMVETSKVTAHGSTNR LNATIVFYIKSYNPNKKASI+MDS+KMIV DYMGL
Sbjct: 61  VVFPRTPRLMVETSKVTAHGSTNRKLNATIVFYIKSYNPNKKASIYMDSMKMIVKDYMGL 120

Query: 121 PFHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSK 180
           PFHS IPTFTLMPRNE VFNSTVRVN +YPFGRPVHSDW+HLELRFSA+VSYIVNRW+SK
Sbjct: 121 PFHSAIPTFTLMPRNETVFNSTVRVNLIYPFGRPVHSDWIHLELRFSAKVSYIVNRWKSK 180

Query: 181 PRLLEIYCDHLWLRINDSTPNFDKTKCRVDL 211
           PRLLEIYCDHLWL+INDSTPNFD+TKC+VD+
Sbjct: 181 PRLLEIYCDHLWLKINDSTPNFDRTKCKVDI 211

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BLAST of CSPI01G14000 vs. ExPASy TrEMBL
Match: A0A5D3DB78 (Protein YLS9-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00060 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 4.4e-78
Identity = 155/173 (89.60%), Postives = 162/173 (93.64%), Query Frame = 0


Query: 1   MRSTTTQGEGASSSIIEAPKRSFCRQR-ETTKRTRIIRIIGRSLLSVIIFLSVAIITCWL 60
           MRSTTTQ E ASSSI+EAPKRSF RQR ETTKRTRIIRIIGRSLL VIIFLSVAIITCWL
Sbjct: 1   MRSTTTQEEEASSSIVEAPKRSFYRQRHETTKRTRIIRIIGRSLLCVIIFLSVAIITCWL 60

Query: 61  VVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGL 120
           VVFPRTPRLMVETSKVTAHGSTNR LNATIVFYIKSYNPNKKASI+MDS+KMIV DYMGL
Sbjct: 61  VVFPRTPRLMVETSKVTAHGSTNRKLNATIVFYIKSYNPNKKASIYMDSMKMIVKDYMGL 120

Query: 121 PFHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYI 173
           PFHS IPTFTLMPRNE VFNSTVRVN +YPFGRPVHSDW+HLELRFSA+V Y+
Sbjct: 121 PFHSAIPTFTLMPRNETVFNSTVRVNLIYPFGRPVHSDWIHLELRFSAKVRYV 173

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BLAST of CSPI01G14000 vs. ExPASy TrEMBL
Match: A0A0A0LV68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132740 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.5e-73
Identity = 135/208 (64.90%), Postives = 165/208 (79.33%), Query Frame = 0


Query: 3   STTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLVVF 62
           +TTTQGE +SSSII APKR   RQ    KRTR+IRIIGRSLL  I+ L +AI+TCW VV 
Sbjct: 8   TTTTQGEASSSSIIRAPKRGAYRQHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVI 67

Query: 63  PRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFH 122
           PRTP+LMVE+ +VT + ST R LNATIVF I+SYNPNK+ASI++DS+KM V +YM +PFH
Sbjct: 68  PRTPQLMVESGQVTGYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFH 127

Query: 123 STIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKPRL 182
           S IP FT+ PRN  V   T+ VN +YPFGRP+H+ W+H+EL FSA+VSYI NRW SKPRL
Sbjct: 128 SDIPNFTMTPRNMTVLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRL 187

Query: 183 LEIYCDHLWLRINDSTPNFDKTKCRVDL 211
           +EIYC+H W +I+DS PNFD  KC+VDL
Sbjct: 188 MEIYCNHFWFKIDDSMPNFDNIKCQVDL 215

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BLAST of CSPI01G14000 vs. ExPASy TrEMBL
Match: A0A6J1I0B9 (uncharacterized protein At1g08160-like OS=Cucurbita maxima OX=3661 GN=LOC111469334 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.1e-55
Identity = 124/211 (58.77%), Postives = 156/211 (73.93%), Query Frame = 0


Query: 6   TQGEGASS--SIIEAPKRS-FCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLVVF 65
           TQGE +SS  SIIEAPK S + +Q  T KRT+++RIIGRSLL+V+  + +AI+ CWLVVF
Sbjct: 5   TQGEASSSSTSIIEAPKPSYYAQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVF 64

Query: 66  PRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFH 125
           P+TP L++E   VT H  T+R LNA+I F IKSYNPNK+ASIHMDS+KM + D MG  F 
Sbjct: 65  PKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDD-MGQTFI 124

Query: 126 STIPTFTLMPRNEMVFNSTVRVNFMYPFGRP---VHSDWVHLELRFSAQVSYIVNRWRSK 185
           +TIPTFT +P N+     TV VNF+YPFG+    + S+ ++ EL FSA VSYIV +W SK
Sbjct: 125 TTIPTFTQLPGNQTFLTPTVEVNFIYPFGQMKDLMLSNGLNPELHFSAHVSYIVEKWASK 184

Query: 186 PRLLEIYCDHLWLRINDSTPNFDKTKCRVDL 211
            R LEIYCD + L+IN STP FD TKC+VDL
Sbjct: 185 RRSLEIYCDRVRLKINGSTP-FDNTKCKVDL 213

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BLAST of CSPI01G14000 vs. NCBI nr
Match: XP_011648453.2 (uncharacterized protein LOC105434468 [Cucumis sativus] >KGN64863.1 hypothetical protein Csa_022777 [Cucumis sativus])

HSP 1 Score: 425.2 bits (1092), Expect = 3.2e-115
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLV 60
           MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLV
Sbjct: 1   MRSTTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLV 60

Query: 61  VFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLP 120
           VFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLP
Sbjct: 61  VFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLP 120

Query: 121 FHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKP 180
           FHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKP
Sbjct: 121 FHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKP 180

Query: 181 RLLEIYCDHLWLRINDSTPNFDKTKCRVDL 211
           RLLEIYCDHLWLRINDSTPNFDKTKCRVDL
Sbjct: 181 RLLEIYCDHLWLRINDSTPNFDKTKCRVDL 210

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BLAST of CSPI01G14000 vs. NCBI nr
Match: XP_008462391.1 (PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo])

HSP 1 Score: 384.0 bits (985), Expect = 8.2e-103
Identity = 190/211 (90.05%), Postives = 201/211 (95.26%), Query Frame = 0


Query: 1   MRSTTTQGEGASSSIIEAPKRSFCRQR-ETTKRTRIIRIIGRSLLSVIIFLSVAIITCWL 60
           MRSTTTQ E ASSSI+EAPKRSF RQR ETTKRTRIIRIIGRSLL VIIFLSVAIITCWL
Sbjct: 1   MRSTTTQEEEASSSIVEAPKRSFYRQRHETTKRTRIIRIIGRSLLCVIIFLSVAIITCWL 60

Query: 61  VVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGL 120
           VVFPRTPRLMVETSKVTAHGSTNR LNATIVFYIKSYNPNKKASI+MDS+KMIV DYMGL
Sbjct: 61  VVFPRTPRLMVETSKVTAHGSTNRKLNATIVFYIKSYNPNKKASIYMDSMKMIVKDYMGL 120

Query: 121 PFHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSK 180
           PFHS IPTFTLMPRNE VFNSTVRVN +YPFGRPVHSDW+HLELRFSA+VSYIVNRW+SK
Sbjct: 121 PFHSAIPTFTLMPRNETVFNSTVRVNLIYPFGRPVHSDWIHLELRFSAKVSYIVNRWKSK 180

Query: 181 PRLLEIYCDHLWLRINDSTPNFDKTKCRVDL 211
           PRLLEIYCDHLWL+INDSTPNFD+TKC+VD+
Sbjct: 181 PRLLEIYCDHLWLKINDSTPNFDRTKCKVDI 211

[Close]

BLAST of CSPI01G14000 vs. NCBI nr
Match: XP_038895458.1 (uncharacterized protein At1g08160-like [Benincasa hispida])

HSP 1 Score: 328.2 bits (840), Expect = 5.3e-86
Identity = 160/214 (74.77%), Postives = 181/214 (84.58%), Query Frame = 0


Query: 1   MRSTTTQGEGA----SSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIIT 60
           MRSTTTQGE +    SSS+I A  RS  R+  T KRTRIIRIIGRSLL VI  + VAI+T
Sbjct: 1   MRSTTTQGESSSSSTSSSVIRASNRSSYRRHGTVKRTRIIRIIGRSLLCVIFLVGVAILT 60

Query: 61  CWLVVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDY 120
           CWL+VFP+TPRL VET KVTA GSTNR LNATIVF IKSYNPNK+AS+HMDS+KMIV+DY
Sbjct: 61  CWLIVFPKTPRLRVETGKVTADGSTNRKLNATIVFTIKSYNPNKRASLHMDSMKMIVNDY 120

Query: 121 MGLPFHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRW 180
           MG PF+S IPTFTLMPRNE V    +RVNF+YPFGRPVHS W+HLELRFSA++SYI N+W
Sbjct: 121 MGQPFYSAIPTFTLMPRNETVLTPVIRVNFIYPFGRPVHSGWIHLELRFSAKISYIFNKW 180

Query: 181 RSKPRLLEIYCDHLWLRINDSTPNFDKTKCRVDL 211
            SKPRLLEIYC+HLWL+INDSTPNFD TKC+VDL
Sbjct: 181 TSKPRLLEIYCNHLWLKINDSTPNFDNTKCKVDL 214

[Close]

BLAST of CSPI01G14000 vs. NCBI nr
Match: KAA0032609.1 (protein YLS9-like isoform X1 [Cucumis melo var. makuwa] >TYK20877.1 protein YLS9-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 300.8 bits (769), Expect = 9.1e-78
Identity = 155/173 (89.60%), Postives = 162/173 (93.64%), Query Frame = 0


Query: 1   MRSTTTQGEGASSSIIEAPKRSFCRQR-ETTKRTRIIRIIGRSLLSVIIFLSVAIITCWL 60
           MRSTTTQ E ASSSI+EAPKRSF RQR ETTKRTRIIRIIGRSLL VIIFLSVAIITCWL
Sbjct: 1   MRSTTTQEEEASSSIVEAPKRSFYRQRHETTKRTRIIRIIGRSLLCVIIFLSVAIITCWL 60

Query: 61  VVFPRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGL 120
           VVFPRTPRLMVETSKVTAHGSTNR LNATIVFYIKSYNPNKKASI+MDS+KMIV DYMGL
Sbjct: 61  VVFPRTPRLMVETSKVTAHGSTNRKLNATIVFYIKSYNPNKKASIYMDSMKMIVKDYMGL 120

Query: 121 PFHSTIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYI 173
           PFHS IPTFTLMPRNE VFNSTVRVN +YPFGRPVHSDW+HLELRFSA+V Y+
Sbjct: 121 PFHSAIPTFTLMPRNETVFNSTVRVNLIYPFGRPVHSDWIHLELRFSAKVRYV 173

[Close]

BLAST of CSPI01G14000 vs. NCBI nr
Match: XP_011654120.1 (uncharacterized protein LOC105435303 [Cucumis sativus] >KGN64864.1 hypothetical protein Csa_022684 [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 3.0e-73
Identity = 135/208 (64.90%), Postives = 165/208 (79.33%), Query Frame = 0


Query: 3   STTTQGEGASSSIIEAPKRSFCRQRETTKRTRIIRIIGRSLLSVIIFLSVAIITCWLVVF 62
           +TTTQGE +SSSII APKR   RQ    KRTR+IRIIGRSLL  I+ L +AI+TCW VV 
Sbjct: 8   TTTTQGEASSSSIIRAPKRGAYRQHGIAKRTRVIRIIGRSLLCAIMLLGIAILTCWFVVI 67

Query: 63  PRTPRLMVETSKVTAHGSTNRHLNATIVFYIKSYNPNKKASIHMDSVKMIVSDYMGLPFH 122
           PRTP+LMVE+ +VT + ST R LNATIVF I+SYNPNK+ASI++DS+KM V +YM +PFH
Sbjct: 68  PRTPQLMVESGQVTGYHSTIRKLNATIVFNIRSYNPNKRASIYVDSMKMTVKNYMSVPFH 127

Query: 123 STIPTFTLMPRNEMVFNSTVRVNFMYPFGRPVHSDWVHLELRFSAQVSYIVNRWRSKPRL 182
           S IP FT+ PRN  V   T+ VN +YPFGRP+H+ W+H+EL FSA+VSYI NRW SKPRL
Sbjct: 128 SDIPNFTMTPRNMTVLTPTILVNCIYPFGRPLHAGWIHIELSFSAKVSYIFNRWASKPRL 187

Query: 183 LEIYCDHLWLRINDSTPNFDKTKCRVDL 211
           +EIYC+H W +I+DS PNFD  KC+VDL
Sbjct: 188 MEIYCNHFWFKIDDSMPNFDNIKCQVDL 215

[Close]

BLAST of CSPI01G14000 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 58.9 bits (141), Expect = 5.6e-09
Identity = 46/179 (25.70%), Postives = 85/179 (47.49%), Query Frame = 0


Query: 42  SLLSVIIFLSVAIITCWLVVFPRTPRLMVETSKVT--AHGSTNRHLNATIVFYIKSYNPN 101
           +L+ + + + +AI+  +L + P+     VE + V   A G+ + H+NA   + IKSYNP 
Sbjct: 43  ALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPE 102

Query: 102 KKASIHMDSVKMIVSDYMGLPFHSTIPTFTLMPRNE------MVFNSTVRVNFMYPFGRP 161
           K  S+   S+++  + +     H  I  F   P+NE      +V ++     F     R 
Sbjct: 103 KHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRA 162

Query: 162 VHS-DWVHLELRFSAQVSYIVNRWRSKPRLLEIYCDHLWLRINDST-PNFDKTKCRVDL 211
             S   + +E+  +A+VSY    +RS+ R L+  C  + + +  S+   F +  C+  L
Sbjct: 163 EKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of CSPI01G14000 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 58.9 bits (141), Expect = 5.6e-09
Identity = 53/194 (27.32%), Postives = 89/194 (45.88%), Query Frame = 0


Query: 31  KRTRIIRIIGRSLLSVIIFLSVAIITCWLVVFPRTPRLMVETSKVTAHGSTN-RHLNATI 90
           +R  +I  I   +L++I   +V  +  WL   P+  R  VE + V     TN  H++AT 
Sbjct: 21  RRPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATF 80

Query: 91  VFYIKSYNPNKKASIHMDSVKMIVS--------DYMGLPFHSTIPTFTLMPRNEMVFNST 150
            F I+S+NPN + S++  SV++ V         D +  PFH   P   +   +E +    
Sbjct: 81  QFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVE-PFHQ--PRMNVKQIDETLIAEN 140

Query: 151 VRVNFMYPFGRPVHSD----WVHLELRFSAQVSYIVNRWRSKPRLLEIYCDHLWLRINDS 210
           V V+     G+ + S      +  E+   A+V + V  W+S  R  +I C H+ + +  S
Sbjct: 141 VAVS--KSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSL--S 200

The following BLAST results are available for this feature:

BLAST of CSPI01G14000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ13	7.9e-08	25.70	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]

BLAST of CSPI01G14000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSU5	1.5e-115	100.00	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G132730 PE=4 ...	[more]
A0A1S3CGU2	3.9e-103	90.05	uncharacterized protein At1g08160-like OS=Cucumis melo OX=3656 GN=LOC103500758 P...	[more]
A0A5D3DB78	4.4e-78	89.60	Protein YLS9-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0LV68	1.5e-73	64.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132740 PE=4 SV=1	[more]
A0A6J1I0B9	1.1e-55	58.77	uncharacterized protein At1g08160-like OS=Cucurbita maxima OX=3661 GN=LOC1114693...	[more]

BLAST of CSPI01G14000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648453.2	3.2e-115	100.00	uncharacterized protein LOC105434468 [Cucumis sativus] >KGN64863.1 hypothetical ...	[more]
XP_008462391.1	8.2e-103	90.05	PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo]	[more]
XP_038895458.1	5.3e-86	74.77	uncharacterized protein At1g08160-like [Benincasa hispida]	[more]
KAA0032609.1	9.1e-78	89.60	protein YLS9-like isoform X1 [Cucumis melo var. makuwa] >TYK20877.1 protein YLS9...	[more]
XP_011654120.1	3.0e-73	64.90	uncharacterized protein LOC105435303 [Cucumis sativus] >KGN64864.1 hypothetical ...	[more]

BLAST of CSPI01G14000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08160.1	5.6e-09	25.70	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G22870.1	5.6e-09	27.32	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 93..175 e-value: 1.9E-6 score: 28.4
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 21..206
None	No IPR available	PANTHER	PTHR31852:SF1	NDR1/HIN1-LIKE PROTEIN 6	coord: 21..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G14000.1	CSPI01G14000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane